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Author SHA1 Message Date
Ricardo Wurmus
68a314d470
gnu: r-dmrcate: Update to 3.0.3.
* gnu/packages/bioconductor.scm (r-dmrcate): Update to 3.0.3.

Change-Id: I5807264b3bb744f292673688e8b45dae816ebafa
2024-07-17 22:38:35 +02:00
Ricardo Wurmus
775fa6631d
gnu: r-delayedarray: Update to 0.30.1.
* gnu/packages/bioconductor.scm (r-delayedarray): Update to 0.30.1.

Change-Id: I14176f2b7111ce22560ab36f59a950a28c0a14cd
2024-07-17 22:38:35 +02:00
Ricardo Wurmus
1fc6f89cb3
gnu: r-decoupler: Update to 2.10.0.
* gnu/packages/bioconductor.scm (r-decoupler): Update to 2.10.0.

Change-Id: I6fbfefb53e907106cf33e6674f984a3e9bbfdf42
2024-07-17 22:38:35 +02:00
Ricardo Wurmus
349925f04b
gnu: r-asics: Update to 2.20.1.
* gnu/packages/bioconductor.scm (r-asics): Update to 2.20.1.

Change-Id: I24dabd37217ba4e904f1f5c7a6f4aed69076a91f
2024-07-17 22:38:35 +02:00
Ricardo Wurmus
8bd94e42ba
gnu: r-alabaster-se: Update to 1.4.1.
* gnu/packages/bioconductor.scm (r-alabaster-se): Update to 1.4.1.

Change-Id: I758d1c6662e1b8a253e6c99b1679e14599df6670
2024-07-17 22:38:35 +02:00
Ricardo Wurmus
a23363ae59
gnu: r-alabaster-ranges: Update to 1.4.2.
* gnu/packages/bioconductor.scm (r-alabaster-ranges): Update to 1.4.2.

Change-Id: I7f02af58acd00672db10bd4de75f863bba9d7c06
2024-07-17 22:38:35 +02:00
Ricardo Wurmus
a9e3312327
gnu: r-alabaster-matrix: Update to 1.4.2.
* gnu/packages/bioconductor.scm (r-alabaster-matrix): Update to 1.4.2.

Change-Id: I49d29c3382153b0ecb32dd1053e8b7e62b8cd0bd
2024-07-17 22:38:35 +02:00
Ricardo Wurmus
12ccddaf9a
gnu: r-alabaster-base: Update to 1.4.2.
* gnu/packages/bioconductor.scm (r-alabaster-base): Update to 1.4.2.

Change-Id: I919fdb38450e527032e77be209d2a95f3e5c5484
2024-07-17 22:38:35 +02:00
Ricardo Wurmus
6fbd56a4d7
gnu: r-genelendatabase: Update to 1.40.1.
* gnu/packages/bioconductor.scm (r-genelendatabase): Update to 1.40.1.
[propagated-inputs]: Add r-txdbmaker.

Change-Id: I3f9a13020f4277ea1e898af371dd0e3d8dd32f70
2024-07-17 22:38:35 +02:00
Ricardo Wurmus
0b7b7f72af
gnu: r-abn: Update to 3.1.1.
* gnu/packages/bioconductor.scm (r-abn): Update to 3.1.1.

Change-Id: Ia69bc7023b8738603c1c51dced09a404b5d5a85d
2024-07-17 22:38:24 +02:00
Ricardo Wurmus
608d718870
gnu: r-activepathways: Update to 2.0.4.
* gnu/packages/bioconductor.scm (r-activepathways): Update to 2.0.4.

Change-Id: I0fbf72ce0e7ab70b39a7bb6485f69e15d7e803d0
2024-07-17 22:38:24 +02:00
Ricardo Wurmus
793075fa63
gnu: r-dsb: Update to 1.0.4.
* gnu/packages/bioconductor.scm (r-dsb): Update to 1.0.4.

Change-Id: Ia2331ab2028bdfaad19467e76c97e791822dd3ce
2024-07-17 22:38:24 +02:00
Ricardo Wurmus
ba8d10c65a
FIXUP r-bigmelon
Change-Id: Ic9b038a93c14595da8575de5449b7aa0504d031e
2024-05-08 12:53:43 +02:00
Ricardo Wurmus
6f95883d01
FIXUP r-infercnv
Change-Id: I94a80f498afb34052dc4b2c3394fd94a463241bc
2024-05-08 12:53:41 +02:00
Ricardo Wurmus
7ba06e0c7b
gnu: r-classdiscovery: Update to 3.4.5.
* gnu/packages/bioconductor.scm (r-classdiscovery): Update to 3.4.5.

Change-Id: I8f712ffb99ff1fc94edf7095bb66ba10184843da
2024-05-08 12:53:41 +02:00
Ricardo Wurmus
c35e5cecbc
gnu: r-valr: Update to 0.8.1.
* gnu/packages/bioconductor.scm (r-valr): Update to 0.8.1.

Change-Id: I66b405f9baecdf7e11187748241d553614a39269
2024-05-08 12:53:41 +02:00
Ricardo Wurmus
8182017710
gnu: r-scgate: Update to 1.6.2.
* gnu/packages/bioconductor.scm (r-scgate): Update to 1.6.2.

Change-Id: I7c1d1884a07db5b6dcf0475fa524cde98297b62c
2024-05-08 12:53:41 +02:00
Ricardo Wurmus
aebf218eb7
gnu: r-phyloseq: Update to 1.48.0.
* gnu/packages/bioconductor.scm (r-phyloseq): Update to 1.48.0.

Change-Id: I6e9204c00ab56f6d1441ab15a01d9680de368e9e
2024-05-08 12:53:41 +02:00
Ricardo Wurmus
23535051f4
gnu: r-tximeta: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.22.0.
[propagated-inputs]: Add r-txdbmaker.

Change-Id: I1a87fadeb0cef5687abc3be91517c7cdcfaa950d
2024-05-08 12:53:41 +02:00
Ricardo Wurmus
55d89a17f9
gnu: r-tricycle: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-tricycle): Update to 1.12.0.

Change-Id: I469d3387d52cce2d443e08ca21f3c18334c7b1f1
2024-05-08 12:53:41 +02:00
Ricardo Wurmus
7dd229853b
gnu: r-tcgabiolinks: Update to 2.32.0.
* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.32.0.

Change-Id: I8ea8c5b220a262e921bcc4448b039153d48ad5c8
2024-05-08 12:53:41 +02:00
Ricardo Wurmus
3ea719d1bf
gnu: r-biscuiteer: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-biscuiteer): Update to 1.18.0.

Change-Id: If9119ebcde80e8548df5bcd4ffab1b0dca4ca726
2024-05-08 12:53:41 +02:00
Ricardo Wurmus
4689ba62f5
gnu: r-omnipathr: Update to 3.11.10.
* gnu/packages/bioconductor.scm (r-omnipathr): Update to 3.11.10.

Change-Id: I3e93662d106c84cbe611f788f2c16f5caa748fbc
2024-05-08 12:53:41 +02:00
Ricardo Wurmus
a37cf20566
gnu: r-omicade4: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-omicade4): Update to 1.44.0.

Change-Id: Iace759b9cc18c774f8a595f5ae05aa7256078901
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
74d8555fc0
gnu: r-dmrseq: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.24.0.

Change-Id: Ia0a2aff28eb12c730933c81a1afe203805c51a25
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
b138e6fc5b
gnu: r-dada2: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-dada2): Update to 1.32.0.

Change-Id: I6e8764f77d05923b3534aff1388bf021491118fe
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
7cb5aac097
gnu: r-bsseq: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-bsseq): Update to 1.40.0.

Change-Id: If2cb52db5144dd8c625d428c7a83736d0eb9ce68
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
73a75b1a72
gnu: r-biotmle: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-biotmle): Update to 1.28.0.

Change-Id: Idd65b115b561e4069470133fdf70da803b7e463e
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
65a3deae8c
gnu: r-bioqc: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-bioqc): Update to 1.32.0.

Change-Id: If59869b7ced6952d277b9fb45a25bd903abb9bb2
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
84047fe00d
gnu: r-bionet: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-bionet): Update to 1.64.0.

Change-Id: I3a66573dfe5b4a2758bea8e7af6a05b22a14b218
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
7315d4d4e1
gnu: r-bionero: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-bionero): Update to 1.12.0.

Change-Id: I17d7d7bab2ea647e5a49c8f8482251dac34edda2
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
3150174b01
gnu: r-biomvrcns: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-biomvrcns): Update to 1.44.0.

Change-Id: I7a392cab724c7757b4e41e472fd9644031674ddb
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
65e8360b94
gnu: r-biomvcclass: Update to 1.72.0.
* gnu/packages/bioconductor.scm (r-biomvcclass): Update to 1.72.0.

Change-Id: I64be6be30c5a64517cc285842b438a9bbfd9b463
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
f6436cd8cc
gnu: r-mvcclass: Update to 1.78.0.
* gnu/packages/bioconductor.scm (r-mvcclass): Update to 1.78.0.

Change-Id: Ib40c3da90a3a77dbac7563eb1c3053669069325c
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
d310e9ea81
gnu: r-biomformat: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-biomformat): Update to 1.32.0.

Change-Id: I6d789e28a5f87ed6af111c20346c388e00f75697
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
f8cb2a50dc
gnu: r-biodb: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-biodb): Update to 1.12.0.

Change-Id: If7001f4b7fd5393a45799562d2ece279e0a60215
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
5748d5c626
gnu: r-biocthis: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-biocthis): Update to 1.14.0.

Change-Id: I1ee87d7a43237325ee4c4d93d9f69f0c3764a13b
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
5090b976d5
gnu: r-bcrank: Update to 1.66.0.
* gnu/packages/bioconductor.scm (r-bcrank): Update to 1.66.0.

Change-Id: I33ab9ad800c550b90268e7382ca1237874ca8d86
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
a791fbd1a3
gnu: r-bbcanalyzer: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-bbcanalyzer): Update to 1.34.0.

Change-Id: I14da55ec9487fe641aac8e7e85708253afc1bc83
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
856c5c775f
gnu: r-baynorm: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-baynorm): Update to 1.22.0.

Change-Id: I49339ce8e370d45a1c2b018d14dc38a2ce1a8fef
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
019b2f05a3
gnu: r-bayesspace: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-bayesspace): Update to 1.14.0.

Change-Id: Id08d540943a7821eba58dbfd933cc1efb30059aa
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
92383b27d6
gnu: r-bayesknockdown: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-bayesknockdown): Update to 1.30.0.

Change-Id: I02fd2b4f87eca8e9ef6446a05f1b17445b37698c
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
a088ccde60
gnu: r-basilisk: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-basilisk): Update to 1.16.0.

Change-Id: I48bf7fef391d1025cc348b6f76538523c4adb1e8
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
4cf075578a
gnu: r-basilisk-utils: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-basilisk-utils): Update to 1.16.0.

Change-Id: I4c6a737383c616b990a880848edfae7fec2d0ee5
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
a6a6760a3e
gnu: r-basicstarrseq: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-basicstarrseq): Update to 1.32.0.

Change-Id: I282493d98bc9d765ac29a28c58bc6531b0153dd5
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
f5ac7b45a1
gnu: r-basics: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-basics): Update to 2.16.0.

Change-Id: Ie3d41d7d58bc45d9e95379d0d1523e21e09009e0
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
f01e5511a2
gnu: r-basic4cseq: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-basic4cseq): Update to 1.40.0.

Change-Id: Idba4d11fc6def781e93c7d575c93f09c546e3170
2024-05-08 12:53:40 +02:00
Ricardo Wurmus
03d957d0db
gnu: r-dir-expiry: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-dir-expiry): Update to 1.12.0.

Change-Id: I5d75a7d3e56963c653d20b3c9cce8023b76306ac
2024-05-08 12:53:39 +02:00
Ricardo Wurmus
d80573f55e
gnu: r-genetclassifier: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-genetclassifier): Update to 1.44.0.

Change-Id: I750ee3bacbf9e819ef0853a3f951f4f32ab7b77e
2024-05-08 12:53:39 +02:00
Ricardo Wurmus
249598455d
gnu: r-minet: Update to 3.62.0.
* gnu/packages/bioconductor.scm (r-minet): Update to 3.62.0.

Change-Id: I2519b6e7526c481bf58f2ba75b2e0a1381f41679
2024-05-08 12:53:39 +02:00