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21219 Commits (6a88e4ee64433386dcd5ee9bf8ca00e0e1a9e87e)

Author SHA1 Message Date
Maxim Cournoyer 516bfed7a3
profiles: Add elapsed time to manual-database hook to output message.
* guix/profiles.scm (manual-database): Add elapsed time to manual-database
hook to output message.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-05-16 23:10:10 +02:00
Julien Lepiller 16dcac5b26
gnu: php: Update to 7.1.5.
* gnu/packages/php.scm (php): Update to 7.1.5.
[arguments]: Remove a no longer relevant test fix.
2017-05-16 22:43:34 +02:00
Ricardo Wurmus 441e99d433
gnu: glibc/hurd: Do not apply i686 patch.
This is a follow-up to commit c2e4f14ac8.

* gnu/packages/base.scm (glibc/hurd)[arguments]: Override pre-configure phase
with a copy that does not include the patch application.
2017-05-16 22:37:31 +02:00
Ricardo Wurmus 711a0dcefa
gnu: glibc/hurd: Use modify-phases syntax.
* gnu/packages/base.scm (glibc/hurd)[arguments]: Use modify-phases syntax.
2017-05-16 22:37:31 +02:00
Kei Kebreau 231e48d6db
gnu: emacspeak: Update to 46.0.
* gnu/packages/emacs.scm (emacspeak): Update to 46.0.
[source]: Add snippet to delete pre-compiled Emacs Lisp files.
[arguments]: Adjust phases for the update.
2017-05-16 16:02:59 -04:00
Ricardo Wurmus 17a69cf623
import cran: Check if pkg-config is needed.
* guix/import/cran.scm (needs-pkg-config?): New procedure.
(description->package): Use it.
2017-05-16 21:43:35 +02:00
Ricardo Wurmus a0f43208cb
import cran: Refactor "needs-zlib?".
* guix/import/cran.scm (tarball-files-match-pattern?): New procedure.
(needs-zlib?): Implement in terms of "tarball-files-match-pattern?".
2017-05-16 21:43:15 +02:00
Ricardo Wurmus ff8c179ab6
import cran: Export package predicates.
* guix/import/cran.scm (cran-package?, bioconductor-package?,
bioconductor-data-package?, bioconductor-experiment-package?): Export
procedures.
2017-05-16 21:42:18 +02:00
Ricardo Wurmus daaa270ecc
import cran: Add predicate for Bioconductor experiment packages.
* guix/import/cran.scm (bioconductor-experiment-package?): New variable.
2017-05-16 21:40:39 +02:00
Ricardo Wurmus c9ffa91fd3
import cran: Exclude experiment packages in predicate "bioconductor-package?".
* guix/import/cran.scm (bioconductor-package?): Exclude experiment packages,
because they cannot be updated with the default bioconductor updater.
2017-05-16 21:40:03 +02:00
Ricardo Wurmus 7c9fcb0825
import cran: Fetch DESCRIPTION files from Github mirror.
* guix/import/cran.scm (%bioconductor-svn-url): Remove variable.
(bioconductor-mirror-url): New procedure.
(fetch-description): Take a REPOSITORY symbol instead of a BASE-URL string.
(cran->guix-package): Pass REPOSITORY symbol to "fetch-description".
(latest-cran-release, latest-bioconductor-release): Adjust accordingly.
(bioconductor-package?): Update comment about SVN.
2017-05-16 21:39:06 +02:00
Efraim Flashner ca05bc0e1e
gnu: tor: Update to 0.3.0.7.
* gnu/packages/tor.scm (tor): Update to 0.3.0.7.
2017-05-16 22:26:22 +03:00
Ricardo Wurmus 6db77c7ca1
gnu: java-stringtemplate: Get closer to fixing tests.
* gnu/packages/java.scm (java-stringtemplate)[arguments]: Set test-dir and
override default test target.  Keep tests disabled because they fail for
unknown reasons.
[inputs]: Add java-junit.
2017-05-16 15:18:17 +02:00
Ricardo Wurmus 1345eeb03a
gnu: Rename stringtemplate4-4.0.6 to java-stringtemplate-4.0.6.
* gnu/packages/java.scm (stringtemplate4-4.0.6): Rename this...
(java-stringtemplate-4.0.6): ...to this.
(antlr3)[propagated-inputs]: Adjust accordingly.
2017-05-16 15:18:17 +02:00
Ricardo Wurmus 64b7efc0db
gnu: Rename stringtemplate4 to java-stringtemplate.
* gnu/packages/java.scm (stringtemplate4): Rename this...
(java-stringtemplate): ...to this.
(stringtemplate4-4.0.6)[inherit]: Adjust accordingly.
(antlr3)[inputs]: Likewise.
2017-05-16 15:18:17 +02:00
Ricardo Wurmus f4aa4cfe00
gnu: stringtemplate4: Prettify "generate-grammar" phase.
* gnu/packages/java.scm (stringtemplate4)[arguments]: Rewrite
"generate-grammar" phase to use "with-directory-excursion" and to report
success or failure.
2017-05-16 15:18:17 +02:00
Ricardo Wurmus 407df789cf
gnu: stringtemplate4: Inherit from java-stringtemplate-3.
* gnu/packages/java.scm (stringtemplate4)[inherit]: Add
"java-stringtemplate-3" as parent.
[home-page, synopsis, description, license]: Inherit from parent.
2017-05-16 15:18:17 +02:00
Ricardo Wurmus b101b4e8c1
gnu: java-stringtemplate-3: Use return value in build phase.
* gnu/packages/java.scm (java-stringtemplate-3)[arguments]: Let
build phase "generate-grammar" return success or failure.
2017-05-16 15:18:17 +02:00
Ricardo Wurmus 2fcda6d291
gnu: java-stringtemplate-3: Enable tests.
* gnu/packages/java.scm (java-stringtemplate-3)[arguments]: Enable tests; add
build phase to fix tests.
2017-05-16 15:18:16 +02:00
Ricardo Wurmus 129d926d26
gnu: java-stringtemplate-3: Do not hardcode version string.
* gnu/packages/java.scm (java-stringtemplate-3)[arguments]: Take current
version string.
2017-05-16 15:18:16 +02:00
Ricardo Wurmus e44112e1a5
gnu: Rename stringtemplate3 to java-stringtemplate-3.
* gnu/packages/java.scm (stringtemplate3): Replace this...
(java-stringtemplate-3): ...with this.
[name]: Change to "java-stringtemplate".
(stringtemplate4)[inputs]: Adjust accordingly.
(stringtemplate4-4.0.6)[inputs]: Likewise.
(antlr3)[inputs, propagated-inputs]: Likewise.
(antlr3-3.3)[propagated-inputs, arguments]: Likewise.
(antlr3-3.1)[propagated-inputs]: Likewise.
2017-05-16 15:18:16 +02:00
Andy Patterson 8a3814cdc5
doc: Update the documentation for the asdf build systems.
* doc/guix.texi (Build Systems): Remove the no-longer relevant parts about
naming inputs.  Add documentation for the new parameters #:asd-system-name and
 #:test-asd-file.
2017-05-16 15:18:16 +02:00
Andy Patterson 0383afa02a
build-system/asdf: Handle tests defined in external systems.
* guix/build-system/asdf.scm (asdf-build): Add a #:test-asd-file argument.
[builder]: Pass it to the build system.
(package-with-build-system)[transform]: Strip it from source systems' arguments.
* guix/build/asdf-build-system.scm (check): Pass the fully qualified path to
it on to the test-system procedure.
* guix/build/lisp-utils.scm (test-system): Load the file, or otherwise one of
the often used names for it, before running the tests.  Adjust the docstring
accordingly.
2017-05-16 15:18:16 +02:00
Andy Patterson f56da605d8
gnu: sbcl-slynk-boot0: Give the package an appropriate name.
* gnu/packages/lisp.scm (sbcl-slynk-boot0)[name]: Change it to reflect the
bootstrap status of the package.
[arguments]<#:asd-system-name>: Add the appropriate value.
(sbcl-slynk-arglists)[arguments]: Set the appropriate #:asd-file and forcibly
unset #:asd-system-name.
(sbcl-slynk)[name]: Change it to the variable name.
(cl-slynk)[name]: Likewise.
2017-05-16 15:18:16 +02:00
Andy Patterson 4209c31b8f
build-system/asdf: Retain references to source files for binary outputs.
In support of long-running programs in which the users would like to be able
to jump to the source of a definition of any of the dependencies (itself
included) of the program.

* guix/build/asdf-build-system.scm (library-outputs): Move from here ...
* guix/build/lisp-utils.scm (library-outputs): ... to here.
(build-program): Accept dependency-prefixes argument, to allow the caller to
specify references which should be retained.  Default to the library's output.
(build-image): Likewise.
(generate-executable): Likewise.
* gnu/packages/lisp.scm (sbcl-stumpwm+slynk, sbcl-slynk, sbcl-stumpwm): Adjust
accordingly to the new interface.
(sbcl-stumpwm+slynk)[native-inputs]: Move to ...
[inputs]: ... here.
2017-05-16 15:18:16 +02:00
Andy Patterson b9afcb9ed4
build-system/asdf: Simplify the use of lisp-eval-program.
Accept a list of statements, each run within its own `--eval' argument. This
allows statements to use reader package namespacing after a package has been
loaded.

* guix/build/lisp-utils.scm (spread-statements): New procedure.
(lisp-invoke): Rename to ...
(lisp-invocation): ... this. Use spread-statements. Change interface to accept
list of statements instead of a single statement.
(asdf-load-all-systems): Simplify returned statements.
(compile-system): Simplify the program passed to `lisp-eval-program'.
(test-system): Likewise.
(generate-executable-for-system): Likewise. Accept the full symbol describing
the asdf operation to use.
(generate-executable): Document the change.
(build-program, build-image): Use the new interface.
2017-05-16 15:18:15 +02:00
Ricardo Wurmus ac2592536d
gnu: Add cl-unicode.
* gnu/packages/lisp.scm (sbcl-cl-unicode-base, sbcl-cl-unicode)
(ecl-cl-unicode, cl-unicode): New variables.

Co-Authored-By: Andy Patterson <ajpatter@uwarerloo.ca>
2017-05-16 15:18:15 +02:00
Andy Patterson 40f56176c5
build-system/asdf: Handle unusually-named systems.
* guix/build/lisp-utils.scm (valid-char-set): New variable.
(normalize-string): New procedure.
(compiled-system): Truncate the name of a system which contains slashes.
(generate-system-definition, make-asd-file): Use `normalize-string' to alter
the names of the created system and its dependencies.
* guix/build/asdf-build-system.scm (create-asd-file): Normalize the name of
the asd file being created.
2017-05-16 15:18:15 +02:00
Andy Patterson 0186a463d0
build-system/asdf: Always pre-load the system's definition file.
* guix/build-system/asdf.scm (asdf-build)[builder]: Pass a default
`#:asd-file' argument to the build procedure, using the system's name.
* guix/build/asdf-build-system.scm (build, check): Adjust to assume that
`asd-file' will always be a string.
* guix/build/lisp-utils.scm (compile-system, system-dependencies)
(test-system): Likewise.
2017-05-16 15:18:15 +02:00
Andy Patterson 457702b1d9
build-system/asdf: Pass the system name as an argument to the builder.
* guix/build-system/asdf.scm (asdf-build): Use the user-defined system name,
or calculate it from the package's full name.
[builder]: Pass the value along to the build procedure.
(package-with-build-system): Remove #:asd-system-name from source packages'
arguments.
* guix/build/asdf-build-system.scm: Adjust accordingly.
* guix/build/lisp-utils.scm (remove-lisp-from-name): Delete variable.
2017-05-16 15:18:15 +02:00
Andy Patterson b4c9f0c50d
build-system/asdf: Parameterize the lisp type and implementation globally.
* guix/build-system/asdf.scm (asdf-build)[builder]: Parameterize %lisp-type
and %lisp before invoking the build procedure. Don't pass #:lisp-type as an
argument to said procedure.
* guix/build/asdf-build-system.scm: Adjust accordingly.
(source-install-prefix): Rename to %lisp-source-install-prefix.
* guix/build/lisp-utils.scm: Adjust accordingly.
(%lisp-type): New parameter.
(bundle-install-prefix): Rename to %bundle-install-prefix.
* gnu/packages/lisp.scm: Adjust accordingly.
2017-05-16 15:18:15 +02:00
Andy Patterson 6de91ba2a1
build-system/asdf: Make #:lisp a package argument.
* guix/build-system/asdf.scm (lower): Change argument name to `lisp-type'.
(asdf-build): Change argument name to `lisp-type'.  Remove `lisp' as an
argument to the returned procedure.  Change the argument passed to build
phases to `lisp-type'.
* guix/build/asdf-build-system.scm (copy-source, build, check)
(create-asd-file, symlink-asd-files, cleanup-files, strip): Respect
`lisp-type` argument.
* gnu/packages/lisp.scm (sbcl-stumpwm, sbcl-stumpwm+slynk): Likewise.
2017-05-16 15:18:15 +02:00
Andy Patterson 26a16d37ff
build-system/asdf: Keep ecl's generated archive files.
This may be necessary to produce programs or images with ecl.

* guix/build/asdf-build-system.scm (cleanup-files): Don't delete .a files.
2017-05-16 15:18:14 +02:00
Andy Patterson 0e1371be09
build-system/asdf: Don't rename inputs.
* guix/build-system/asdf.scm (package-with-build-system)[transform]: Use updated
`new-inputs' procedure for inputs and native-inputs.
<rewrite>: Don't rename inputs.
<new-propagated-inputs>: Draw from package-inputs and package-native-inputs
for source packages.  Use the original package's propagated-inputs otherwise.
<new-inputs>: Convert into a function to be used to transform inputs and
native-inputs.
* gnu/packages/lisp.scm (sbcl-fiveam, sbcl-bordeaux-threads)
(sbcl-flexi-streams, sbcl-cl-ppcre, sbcl-stumpwm, sbcl-slynk-arglists)
(sbcl-slynk-fancy-inspector): Don't prefix input names.
2017-05-16 15:18:14 +02:00
Andy Patterson 35189728cd
build-system/asdf: Use asdf to determine dependencies.
This removes the need for conventions to determine which inputs are run-time
dependencies, and also the need to specify "special" dependencies.

* guix/build/lisp-utils.scm (patch-asd-file, lisp-dependencies)
(wrap-perform-method): Remove them.
(inputs->asd-file-map, system-dependencies, generate-system-definition)
(generate-dependency-links, make-asd-file): New procedures.
(lisp-eval-program): Add an error if no lisp matches.
(compile-system): Don't use asdf's in-built asd-file generator.
2017-05-16 15:18:14 +02:00
Andy Patterson 290bf612bb
gnu: cl-stumpwm: Build the library in "lib" and the program in "bin".
* gnu/packages/lisp.scm (sbcl-stumpwm)[outputs]: Remove "bin" and add "lib".
[arguments]<#:phases>: Change the target of `build-program' to the "out"
output. Likewise, change the target of the desktop file generation.
(sbcl-stumpwm+slynk)[inputs]: Use the "lib" output of sbcl-stumpwm.
2017-05-16 15:18:14 +02:00
Andy Patterson 6c76ce39ac
build-system/asdf: Make it possible to use "lib" as the build output.
* guix/build/asdf-build-system.scm (library-output): New procedure.
(copy-source, build, check, patch-asd-files, symlink-asd-files)
(cleanup-files): Use it.
(copy-files-to-output): Rework to take an output instead of an outputs and
string pair.
(install, copy-source): Use the new method.
2017-05-16 15:18:14 +02:00
Andy Patterson bc389c20a9
build-system/asdf: Rename %install-prefix to %source-install-prefix.
* guix/build/lisp-utils.scm (%install-prefix): Rename to
%source-install-prefix.
(build-install-prefix): Use it.
* guix/build/asdf-build-system.scm (source-install-prefix)
(%system-install-prefix, source-directory, copy-source): Likewise.
2017-05-16 15:18:14 +02:00
Andy Patterson 75e8b3af69
gnu: cl-slynk: Explain some naming choices.
* gnu/packages/lisp.scm (sbcl-slynk-boot0): Add comments explaining its
purpose and the reason its package-name must differ from its name.
2017-05-16 15:18:13 +02:00
Andy Patterson 14afc7b89c
gnu: cl-slynk: Clarify the description.
* gnu/packages/lisp.scm (sbcl-slynk-boot0)[description]: Describe slime.
2017-05-16 15:18:13 +02:00
Ludovic Courtès 43e5a262aa
Update NEWS. 2017-05-16 15:18:12 +02:00
Ludovic Courtès 33ec536b90
gnu: guix: Update snapshot.
* gnu/packages/package-management.scm (guix): Update to ce92d26.
2017-05-16 15:18:12 +02:00
Ludovic Courtès 7ee7ee16ea
gnu: guix: Update snapshot.
* gnu/packages/package-management.scm (guix): Update to ce92d26.
2017-05-16 15:14:33 +02:00
Mathieu Othacehe 5641dffb07
scripts: system: Display bootloader name in "list-generations".
* guix/scripts/system.scm (display-system-generation): Display
  bootloader name.
2017-05-16 14:41:02 +02:00
Mathieu Othacehe 3241f7ff92
scripts: system: Adapt "switch-generation" to new bootloader API.
* guix/scripts/system.scm (reinstall-grub): Rename to
  reinstall-bootloader. Read boot-device and boot-type from parameters file to
  be able to restore the correct bootloader on specified device.
  Factorize bootloader installation code by calling install-bootloader.
 (system-bootloader-name): New procedure.
 (switch-to-system-generation): Adapt.
2017-05-16 14:41:02 +02:00
Mathieu Othacehe 1229d328fb
scripts: system: Adapt "init" to new bootloader API.
* guix/scripts/system.scm (install): Pass installer a new
argument. Rename other arguments.
Call install-bootloader instead of install-grub*.
(perform-action): Adapt.
2017-05-16 14:41:02 +02:00
Mathieu Othacehe 3042c5d8bb
scripts: system: Adapt "reconfigure" to new bootloader API.
* guix/scripts/system.scm (install-grub*): Rename to install-bootloader.  Use
keys to pass arguments.  Pass a new argument, "installer-drv" which is a script
in store dealing with bootloader-specific install actions.  Also call
"install-boot-config" to install the bootloader config file.

(install-bootloader-derivation): New procedure.  It returns a derivation that
builds a file containing "install-procedure" gexp.

(perform-action): Build install-proc derivation and call install-bootloader
with the resulting file.  Stop adding GRUB to PATH as bootloaders are called in
install-proc with direct store paths.
2017-05-16 14:41:01 +02:00
Mathieu Othacehe bcaf67c44f
bootloader: Add bootloader name to boot-parameters record.
* gnu/system.scm (<boot-parameters>)[name]: New field.
(boot-parameters-boot-name): Ditto.
(operating-system-boot-parameters-file): Add new field.
(operating-system-boot-parameters): Ditto.
(read-boot-parameters): Ditto.
2017-05-16 14:41:01 +02:00
Mathieu Othacehe 9121ce553d
bootloader: Adapt vm to new bootloader API.
* gnu/build/install.scm (install-boot-config): New procedure.
  (install-grub): Move to (gnu bootloader grub).
* gnu/build/vm.scm (register-bootcfg-root): Rename register-grub.cfg-root and
  adjust accordingly.
  (initialize-hard-disk): Takes a bootloader-package, bootcfg, bootcfg-location and
  bootloader-installer procedure. Adjust accordingly.
* gnu/system/vm.scm (qemu-image): Adjust to initialize-hard-disk.
  (system-disk-image, system-qemu-image, system-qemu-image/shared-store):
  Adjust to qemu-image.
2017-05-16 14:41:01 +02:00
Mathieu Othacehe b09a8da4a2
bootloader: Add extlinux support.
* gnu/bootloader.scm: New file.
* gnu/bootloader/extlinux.scm: New file.
* gnu/bootloader/grub.scm: New file.
* gnu/local.mk: Build new files.
* gnu/system.scm: Adapt to new bootloader api.
* gnu/scripts/system.scm: Adapt to new bootloader api.
* gnu.scm: Remove (gnu system grub) and replace by (gnu bootloader) and (gnu
bootloader grub) modules.
* gnu/system/grub.scm: Moved content to gnu/bootloader/grub.scm.
* gnu/system/vm: Replace (gnu system grub) module by (gnu bootloader).
* gnu/tests.scm: Ditto.
* gnu/tests/nfs.scm: Ditto.
2017-05-16 14:41:01 +02:00