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68377 Commits (6ba730cfe65b5343e86ee3a42fe94fd1fca4c8b7)

Author SHA1 Message Date
Tobias Geerinckx-Rice 9a2d7e0f63
gnu: julia-mbedtls: Fix typo in description.
* gnu/packages/julia-xyz.scm (julia-mbedtls)[description]: Fix typo.
2021-04-10 14:11:34 +02:00
Tobias Geerinckx-Rice 8ab76a8900
gnu: python-pypeg2: Fix typo in synopsis.
* gnu/packages/python-xyz.scm (python-pypeg2)[synopsis]: Fix typo.
2021-04-10 14:11:33 +02:00
Tobias Geerinckx-Rice 2ecd7d6499
gnu: go-github-com-go-sql-driver-mysql: Fix typo in description.
* gnu/packages/golang.scm (go-github-com-go-sql-driver-mysql)
[description]: Fix typo.
2021-04-10 14:11:33 +02:00
Tobias Geerinckx-Rice 6036df8810
gnu: python-scour: Fix typo in description.
* gnu/packages/python-xyz.scm (python-scour)[description]: Fix typo.
2021-04-10 14:11:33 +02:00
Tobias Geerinckx-Rice 3cca373b2e
gnu: python-nestedtext: Fix typo in description.
* gnu/packages/python-xyz.scm (python-nestedtext)
[description]: Fix typo.
2021-04-10 14:11:33 +02:00
Tobias Geerinckx-Rice 6dbac0d2e4
gnu: gpart: Fix typo in description.
* gnu/packages/disk.scm (gpart)[description]: Fix my own typo.
2021-04-10 14:11:33 +02:00
Tobias Geerinckx-Rice 816a5ecdc8
bootloader: grub: Fix typo in docstring.
* gnu/bootloader/grub.scm (install-grub-efi-netboot): Fix typo.
2021-04-10 14:11:33 +02:00
Tobias Geerinckx-Rice 1555d1d801
gnu: rust-hmac-sha1: Fix description.
* gnu/packages/crates-io.scm (rust-hmac-sha1-0.1)
[description]: Fix typo & use @acronym{}.
2021-04-10 14:11:32 +02:00
Tobias Geerinckx-Rice 04a5e7918d
gnu: r-chromstar: Fix typo in description.
* gnu/packages/bioconductor.scm (r-chromstar)[description]: Fix typo.
2021-04-10 14:11:32 +02:00
Tobias Geerinckx-Rice 95cfad9b29
gnu: nordic-theme: Fix typo in synopsis & description.
* gnu/packages/gnome-xyz.scm (nordic-theme)
[synopsis, description]: Fix typo.
2021-04-10 14:11:32 +02:00
Tobias Geerinckx-Rice a1d6d8bcd6
gnu: itcl: Fix typo in description.
* gnu/packages/tcl.scm (itcl)[description]: Fix typo.
2021-04-10 14:11:32 +02:00
Tobias Geerinckx-Rice 04c49b2528
gnu: ghc-wai-cors: Fix typo in description.
* gnu/packages/haskell-web.scm (ghc-wai-cors)[description]: Fix typo.
2021-04-10 14:11:32 +02:00
Tobias Geerinckx-Rice cb22d103fb
gnu: bluez-alsa: Fix typo in description.
* gnu/packages/audio.scm (bluez-alsa)[description]: Fix typo.
2021-04-10 14:11:31 +02:00
Tobias Geerinckx-Rice f0ca97f56f
gnu: bsd-games: Fix typo in description.
* gnu/packages/games.scm (bsd-games)[description]: Fix typo, and delete
stray comma.
2021-04-10 14:11:31 +02:00
Tobias Geerinckx-Rice 44a53674af
gnu: config: Fix typo in synopsis.
* gnu/packages/autotools.scm (config)[synopsis]: Fix typo.
2021-04-10 14:11:31 +02:00
Tobias Geerinckx-Rice 5bee5ced34
gnu: rust-scratch: Fix typo in description.
* gnu/packages/crates-io.scm (rust-scratch-1)[description]: Fix typo.
2021-04-10 14:11:31 +02:00
Tobias Geerinckx-Rice 214461edc4
gnu: sbcl-cl-slug: Fix typos in synopsis & description.
* gnu/packages/lisp-xyz.scm (sbcl-cl-slug)
[synopsis, description]: Fix typos.
2021-04-10 14:11:31 +02:00
Tobias Geerinckx-Rice 7699bbb3a9
gnu: lv2-speech-denoiser: Fix typo in description.
* gnu/packages/audio.scm (lv2-speech-denoiser)[description]: Fix typo.
2021-04-10 14:11:30 +02:00
Tobias Geerinckx-Rice 87ff6ea8e2
gnu: kmail: Fix typo in description.
* gnu/packages/kde-pim.scm (kmail)[description]: Fix typo.
2021-04-10 14:11:30 +02:00
Tobias Geerinckx-Rice 4067bf6911
gnu: r-physicalactivity: Fix typos in description.
* gnu/packages/cran.scm (r-physicalactivity)[description]: Fix typos.
2021-04-10 14:11:30 +02:00
Tobias Geerinckx-Rice 11e711f8ab
gnu: erofs-utils: Fix typo in synopsis & description.
* gnu/packages/linux.scm (erofs-utils)[synopsis, description]: Fix typo.
2021-04-10 14:11:30 +02:00
Tobias Geerinckx-Rice 81a5dcfcba
gnu: geda-gaf: Fix typo in description.
* gnu/packages/engineering.scm (geda-gaf)[description]: Fix typo.
2021-04-10 14:11:29 +02:00
Tobias Geerinckx-Rice eb97517492
gnu: tl-parser: Fix typo in description.
* gnu/packages/telegram.scm (tl-parser)[description]: Fix typo.
2021-04-10 14:11:29 +02:00
Tobias Geerinckx-Rice f45284f127
gnu: emacs-webpaste: Fix typo in description.
* gnu/packages/emacs-xyz.scm (emacs-webpaste)[description]: Fix typo.
2021-04-10 14:11:29 +02:00
Tobias Geerinckx-Rice 37d4706166
gnu: r-msmstests: Fix typos in description.
* gnu/packages/bioconductor.scm (r-msmstests)[description]: Fix typos.
2021-04-10 14:11:29 +02:00
Tobias Geerinckx-Rice 0671046e47
gnu: r-ggforce: Fix typo in description.
* gnu/packages/cran.scm (r-ggforce)[description]: Fix typo.
2021-04-10 14:11:29 +02:00
Tobias Geerinckx-Rice a972e272e9
gnu: Fix typo in (gnu packages gtk).
* gnu/packages/gtk.scm: Fix typo in copyright header.
2021-04-10 14:11:28 +02:00
Tobias Geerinckx-Rice 1b2dbcf0c8
gnu: go-github-com-charmbracelet-glamour: Fix typo in description.
* gnu/packages/golang.scm (go-github-com-charmbracelet-glamour)
[description]: Fix typo.
2021-04-10 14:11:28 +02:00
Tobias Geerinckx-Rice 3fb6d439fe
gnu: nimf: Fix typo in description.
* gnu/packages/language.scm (nimf)[description]: Fix typo.
2021-04-10 14:11:28 +02:00
Tobias Geerinckx-Rice 3a2e1fa715
gnu: sbcl-claw-utils: Fix typo in description.
* gnu/packages/lisp-xyz.scm (sbcl-claw-utils)[description]: Fix typo.
2021-04-10 14:11:28 +02:00
Tobias Geerinckx-Rice 48a2887a8f
gnu: guile-eris: Fix typo in description.
* gnu/packages/guile-xyz.scm (guile-eris)[description]: Fix typo.
2021-04-10 14:11:28 +02:00
Tobias Geerinckx-Rice 8ab5fa53ae
gnu: libime: Fix typo in description.
* gnu/packages/fcitx5.scm (libime)[description]: Fix typo.
2021-04-10 14:11:27 +02:00
Tobias Geerinckx-Rice 4274014771
gnu: python-dpath: Fix typo in synopsis & description.
* gnu/packages/python-xyz.scm (python-dpath)
[synopsis, description]: Fix typo.
2021-04-10 14:11:27 +02:00
Tobias Geerinckx-Rice 80a63aefc2
gnu: popt: Fix typo in description.
* gnu/packages/popt.scm (popt)[description]: Fix typo.
2021-04-10 14:11:27 +02:00
Tobias Geerinckx-Rice a46174b69c
gnu: rust-filesize: Fix typo in description.
* gnu/packages/crates-io.scm (rust-filesize-0.2)[description]: Fix typo.
2021-04-10 14:11:27 +02:00
Tobias Geerinckx-Rice 871012000c
gnu: camlboot: Fix typo in synopsis.
* gnu/packages/ocaml.scm (camlboot)[synopsis]: Fix typo.
2021-04-10 14:11:27 +02:00
Tobias Geerinckx-Rice e5852655b8
gnu: sortmerna: Mark up description.
* gnu/packages/bioinformatics.scm (sortmerna)[description]: Use @acronym{}.
2021-04-10 14:11:26 +02:00
Tobias Geerinckx-Rice dd4027e84c
gnu: tmsu: Fix typo in synopsis & description.
* gnu/packages/file-systems.scm (tmsu)[synopsis, description]: Fix typo.
2021-04-10 14:11:26 +02:00
Tobias Geerinckx-Rice 173a631da0
tests: nfs: Fix typo in description.
* gnu/tests/nfs.scm (%test-nfs-root-fs)[description]: Fix typo.
2021-04-10 14:11:26 +02:00
Tobias Geerinckx-Rice d2f2c09d27
services: git-daemon: Fix typo in docstring.
* gnu/services/version-control.scm (git-daemon-service): Fix docstring
typo.
2021-04-10 14:11:26 +02:00
Tobias Geerinckx-Rice a7e5d95697
gnu: davfs2: Fix typo in description.
* gnu/packages/file-systems.scm (davfs2)[description]: Fix typo.
2021-04-10 14:11:26 +02:00
Tobias Geerinckx-Rice 4869a509d1
gnu: erfa: Mark up description.
* gnu/packages/astronomy.scm (erfa)[description]: Add all the @acronym{}s.
2021-04-10 14:11:25 +02:00
Tobias Geerinckx-Rice fef8bc470c
gnu: erfa: Update to 1.7.3.
* gnu/packages/astronomy.scm (erfa): Update to 1.7.3.
2021-04-10 14:11:25 +02:00
Guillaume Le Vaillant 5eded9b52d
gnu: airspyhf: Fix udev rules.
* gnu/packages/radio.scm (airspyhf)[arguments]: Add 'fix-udev-rules' phase.
2021-04-10 13:33:53 +02:00
Guillaume Le Vaillant 1d568a4598
gnu: gnuradio-osmosdr: Add Airspy HF+ support.
* gnu/packages/radio.scm (gnuradio-osmosdr)[inputs]: Add airspyhf.
2021-04-10 11:50:54 +02:00
Guillaume Le Vaillant 5b49626bc2
gnu: Add airspyhf.
* gnu/packages/radio.scm (airspyhf): New variable.
2021-04-10 11:46:12 +02:00
Maxim Cournoyer 59134f1e02
gnu: jami-qt: Remove the custom wrap phase.
Commit 06eb21856f made it necessary, since it is now handled by the Qt build
system itself.

* gnu/packages/jami.scm (jami-qt)[phases]{wrap}: Remove phase.
2021-04-10 00:55:18 -04:00
Leo Famulari fba9e5fb54
gnu: Fix build of python2-feedparser.
This is a followup to commit 506eb97de7.

Feedparser dropped support for Python 2 in version 6.0.0. The latest
release that works with Python 2 is 5.2.1.

* gnu/packages/web.scm (python2-feedparser): Revert back to version 5.2.1.
2021-04-10 00:35:03 -04:00
Brendan Tildesley f68bcc1bc3
gnu: python2-sip: Remove package.
* gnu/packages/qt.scm (python2-sip): Delete variable.
2021-04-09 16:09:27 -04:00
Brendan Tildesley c947920590
gnu: Remove python2-pyqt.
* gnu/packages/qt.scm (python2-pyqt): Remove variable.
2021-04-09 16:09:27 -04:00
Brendan Tildesley 701c0a7904
gnu: Remove python2-pyqtwebengine.
* gnu/packages/qt.scm (python2-pyqtwebengine): Remove variable.
2021-04-09 16:09:26 -04:00
Brendan Tildesley 5d53eec337
gnu: calibre: Update to 5.14.0.
* gnu/packages/ebook.scm (calibre): Update to 5.14.0.
[source]: Adjust the snippet to preserve some files used by the HTML reader.
[native-inputs]: Add python-pyqt-builder. Replace python2-flake8 with
python-flake8.
[inputs]: Remove chmlib, js-mathjax, python-chardet, and python-sip.  Add
python-cchardet, python-speechd, python-zeroconf, python-py7zr, python-pychm,
python-pycryptodome, libjpeg, and libjxr.  Replace all Python 2 dependencies
with their Python 3 equivalents.
[arguments]: Build with the default Python and adjust custom phases accordingly.
Adjust the 'configure' phase to changes in how Calibre uses SIP, and patch
lookup paths for libjpeg and libjxr.
Rename the 'build-extra' phase to 'install-rapydscript', and run it after the
'install' phase. Adjust it for Calibre 5.14.0.
* gnu/packages/patches/calibre-no-updates-dialog.patch,
gnu/packages/patches/calibre-remove-test-sqlite.patch,
gnu/packages/patches/calibre-remove-test-unrar.patch: Adjust patches for Calibre
5.14.0.
2021-04-09 16:09:26 -04:00
Brendan Tildesley 065f2cceb7
gnu: python-html5lib: Depend on python-chardet.
* gnu/packages/python-web.scm (python-html5lib)[propagated-inputs]: Add
python-chardet.
2021-04-09 16:09:26 -04:00
Brendan Tildesley 141e74a830
gnu: Add python-cchardet.
* gnu/packages/freedesktop.scm (python-cchardet): New variable.
2021-04-09 16:09:26 -04:00
Brendan Tildesley 9042a30416
gnu: Add python-pychm.
* gnu/packages/ebook.scm (python-pychm): New variable.
2021-04-09 16:09:26 -04:00
Brendan Tildesley 506eb97de7
gnu: python-feedparser: Update to 6.0.2.
* gnu/packages/web.scm (python-feedparser): Update to 6.0.2.
2021-04-09 16:09:26 -04:00
Brendan Tildesley ac50f6d20d
gnu: python-markdown: Update to 3.3.4.
* gnu/packages/python-xyz.scm (python-markdown): Update to 3.3.4.
2021-04-09 16:09:25 -04:00
Brendan Tildesley 875c2ece92
gnu: Add python-py7zr.
* gnu/packages/python-compression.scm (python-py7zr): New variable.
2021-04-09 16:09:25 -04:00
Brendan Tildesley eacfed8b08
gnu: Add python-bcj-cffi.
* gnu/packages/python-compression.scm (python-bcj-cffi): New variable.
2021-04-09 16:09:25 -04:00
Brendan Tildesley dde1c7655d
gnu: Add python-pyzstd
* gnu/packages/python-compression.scm (python-pyzstd): New variable.
2021-04-09 16:09:25 -04:00
Brendan Tildesley 852f932485
gnu: python-zstandard: Update to 0.15.2.
* gnu/packages/python-compression.scm (python-zstandard): Update to 0.15.2.
2021-04-09 16:09:25 -04:00
Brendan Tildesley 8cc985a00b
gnu: Add python-ppmd-cffi.
* gnu/packages/python-compression.scm (python-ppmd-cffi): New variable.
2021-04-09 16:09:25 -04:00
Brendan Tildesley f9d8d438b3
gnu: Add python-multivolumefile.
* gnu/packages/python-compression.scm (python-multivolumefile): New
variable.
2021-04-09 16:09:24 -04:00
Brendan Tildesley ed2c89f25d
gnu: Add python-pyannotate.
* gnu/packages/python-check.scm (python-pyannotate): New variable.
2021-04-09 16:09:24 -04:00
Brendan Tildesley 506b3299f3
gnu: Add python-zeroconf.
* gnu/packages/python-xyz.scm (python-zeroconf): New variable.
2021-04-09 16:09:24 -04:00
Brendan Tildesley 944640f3ee
gnu: Add python-ifaddr.
* gnu/packages/python-xyz.scm (python-ifaddr): New variable.
2021-04-09 16:09:24 -04:00
Brendan Tildesley 586f017d98
gnu: python-pyqt: Fix build for new python-sip.
* gnu/packages/qt.scm (python-pyqt)
[source]: Remove pyqt-public-sip.patch.
[propagated-inputs]: Add python-pyqt5-sip.
* gnu/packages/patches/pyqt-public-sip.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2021-04-09 16:09:24 -04:00
Brendan Tildesley 8effa05378
gnu: Add python-pyqt5-sip.
* gnu/packages/qt.scm (python-pyqt5-sip): New variable.
2021-04-09 16:09:24 -04:00
Brendan Tildesley 9360706294
gnu: Add python-pyqt-builder.
* gnu/packages/qt.scm (python-pyqt-builder): New variable.
2021-04-09 16:09:23 -04:00
Brendan Tildesley c990604cb0
gnu: python-sip: Update to 5.5.0. Add python-sip-4
* gnu/packages/qt.scm (python-sip): Update to 5.5.0.
(python-sip-4): New variable. Rename the old python-sip to python-sip-4.
(python2-sip): Inherit from python-sip-4.
* gnu/packages/maths.scm (veusz)[native-inputs]: Use python-sip-4.
* gnu/packages/pdf.scm (python-poppler-qt5): Use python-sip-4.
* gnu/packages/geo.scm (qgis)[arguments]: Fix build for python-sip@5.
2021-04-09 16:09:23 -04:00
Kei Kebreau 018b6b46f1
gnu: freeciv: Update to 2.6.4.
* gnu/packages/games.scm (freeciv): Update to 2.6.4.
2021-04-09 13:37:14 -04:00
Tobias Geerinckx-Rice 8615e21a8c
gnu: pidgin: Update to 2.14.3.
* gnu/packages/messaging.scm (pidgin): Update to 2.14.3.
[arguments]: Add an 'eat-leftovers phase.
2021-04-09 18:29:10 +02:00
Tobias Geerinckx-Rice ba1030be40
gnu: stellarium: Update to 0.21.0.
* gnu/packages/astronomy.scm (stellarium): Update to 0.21.0.
2021-04-09 18:29:10 +02:00
Tobias Geerinckx-Rice dcfa85ac1f
gnu: ruby-rexml: Update to 3.2.5.
* gnu/packages/ruby.scm (ruby-rexml): Update to 3.2.5.
2021-04-09 18:29:09 +02:00
Tobias Geerinckx-Rice f6a62f68fa
gnu: libmwaw: Update to 0.3.18.
* gnu/packages/libreoffice.scm (libmwaw): Update to 0.3.18.
2021-04-09 18:29:09 +02:00
Tobias Geerinckx-Rice dd55d64338
gnu: python-yamllint: Update to 1.26.1.
* gnu/packages/python-xyz.scm (python-yamllint): Update to 1.26.1.
2021-04-09 18:29:09 +02:00
Ludovic Courtès ec8d09ee67
gnu: guix: Update to 2d73086.
* gnu/packages/package-management.scm (guix): Update to 2d73086.
2021-04-09 18:09:07 +02:00
Franck Pérignon ccff338086
gnu: Add boost-mpi.
* gnu/packages/boost.scm (boost-mpi): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-04-09 17:46:38 +02:00
Masaya Tojo 4b83f820dd
gnu: guile-cv: Use guile2.2 version of guile-lib.
* gnu/packages/guile-xyz.scm (guile-cv)[propagated-inputs]: Change from
guile-lib to guile2.2-lib.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-04-09 17:46:38 +02:00
Tobias Geerinckx-Rice 24f69e797d
gnu: speedtest-cli: Update to 2.1.3.
* gnu/packages/networking.scm (speedtest-cli): Update to 2.1.3.
2021-04-09 17:38:58 +02:00
Tobias Geerinckx-Rice ececdfc878
gnu: clamav: Update to 0.103.2.
* gnu/packages/antivirus.scm (clamav): Update to 0.103.2.
2021-04-09 17:38:29 +02:00
Tobias Geerinckx-Rice 28c09381d4
gnu: xsimd: Update to 7.4.10.
* gnu/packages/cpp.scm (xsimd): Update to 7.4.10.
2021-04-09 17:37:44 +02:00
Tobias Geerinckx-Rice c8d809f9a4
gnu: dnsmasq: Update to 2.85 [fixes CVE-2021-3448].
* gnu/packages/dns.scm (dnsmasq): Update to 2.85.
2021-04-09 17:18:43 +02:00
Paul Garlick c3c338e0b5
gnu: Add texlive-cabin.
* gnu/packages/tex.scm: New variable.
2021-04-09 14:35:32 +01:00
Mathieu Othacehe 931572d230
gnu: cuirass: Disable tests on aarch64.
* gnu/packages/ci.scm (cuirass)[arguments]: Disable tests on aarch64.
2021-04-09 14:26:38 +02:00
Efraim Flashner a365777ebd
gnu: gcc-10: Update to 10.3.0.
* gnu/packages/gcc.scm (gcc-10): Update to 10.3.0.
2021-04-09 15:06:35 +03:00
Mathieu Othacehe f4d1abf1f8
gnu: cuirass: Update to 1.0.0-9.d601fe0.
* gnu/packages/ci.scm (cuirass): Update to 1.0.0-9.d601fe0.
2021-04-09 13:40:22 +02:00
Christopher Baines eda4bb4f16
services: Add Laminar.
* gnu/services/ci.scm: New file.
* gnu/tests/ci.scm: New file.
* doc/guix.texi (Laminar): Document the Laminar service.
2021-04-09 11:59:58 +01:00
Christopher Baines 2b469e6023
gnu: Add laminar.
* gnu/packages/ci.scm (laminar): New variable.
2021-04-09 11:54:55 +01:00
Christopher Baines a9f4001df9
gnu: guix-build-coordinator: Update to 0-24.6fb5eaf.
* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-24.6fb5eaf.
2021-04-09 11:32:40 +01:00
Christopher Baines b12fd63ffd
gnu: guix-data-service: Update to 0.0.1-27.df2a0a7.
* gnu/packages/web.scm (guix-data-service): Update to 0.0.1-27.df2a0a7.
2021-04-09 11:30:08 +01:00
Christopher Baines f37d91adc4
gnu: guix-build-coordinator: Update to 0-23.44d0006.
* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-23.44d0006.
[arguments]: Fix missing guile-fibers when not building for the hurd.
2021-04-09 10:09:40 +01:00
Pierre Langlois 7fc922fdaf
gnu: ardour: Update to 6.6.
* gnu/packages/audio.scm (ardour): Update to 6.6.
[origin]: Use git protocol, https isn't available anymore.  Adapt snippet.
[arguments]: Add "--optimize" flags.  Switch to python3.
[inputs]: Add dbus, libwebsockets, openssl, pulseaudio and soundtouch.
2021-04-09 09:42:29 +01:00
Pierre Langlois acd953bd64
gnu: libwebsockets: Update to 4.1.6.
* gnu/packages/web.scm (libwebsockets): Update to 4.1.6.
2021-04-09 09:42:23 +01:00
Mathieu Othacehe 15d668eda4
gnu: cuirass: Update to 1.0.0-8.7542d62.
* gnu/packages/ci.scm (cuirass): Update to 1.0.0-8.7542d62.
2021-04-09 09:46:10 +02:00
Leo Famulari 29a6c36149
gnu: rust-rav1e-0.4.0: Fix build.
Fixes <https://bugs.gnu.org/47667>.

* gnu/packages/crates-graphics.scm (rust-rav1e-0.4)[arguments]: Add
rust-assert-cmd-1, rust-criterion-0.3, and rust-pretty-assertions-0.6
to #:cargo-inputs.
2021-04-09 01:46:21 -04:00
methuselah-0 43c55856c8
gnu: Add galera.
* gnu/packages/databases.scm (galera): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-04-08 23:28:01 +02:00
Nicolas Goaziou 91fe9dd08e
gnu: emacs-emms: Update to 7.0.
* gnu/packages/emacs-xyz.scm (emacs-emms): Update to 7.0.
2021-04-08 22:16:05 +02:00
Christopher Baines 97744de970
gnu: guix-build-coordinator: Update to 0-22.44d0006.
* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-22.44d0006.
2021-04-08 20:49:56 +01:00
Leo Famulari 5bb5b4a7f3
gnu: linux-libre 4.4: Update to 4.4.265.
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.265.
(linux-libre-4.4-pristine-source): Update hash.
2021-04-08 15:12:05 -04:00
Leo Famulari 8a7ef6dc1f
gnu: linux-libre 4.9: Update to 4.9.265.
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.265.
(linux-libre-4.9-pristine-source): Update hash.
2021-04-08 15:12:05 -04:00
Leo Famulari e60c7acf5a
gnu: linux-libre 4.14: Update to 4.14.229.
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.229.
(linux-libre-4.14-pristine-source): Update hash.
2021-04-08 15:12:05 -04:00
Leo Famulari eef44c8732
gnu: linux-libre 4.19: Update to 4.19.185.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.185.
(linux-libre-4.19-pristine-source): Update hash.
2021-04-08 15:12:05 -04:00
Leo Famulari c44dd82a66
gnu: linux-libre 5.4: Update to 5.4.110.
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.110.
(linux-libre-5.4-pristine-source): Update hash.
2021-04-08 15:12:05 -04:00
Leo Famulari 1cdf95c14f
gnu: linux-libre 5.10: Update to 5.10.28.
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.28.
(linux-libre-5.10-pristine-source): Update hash.
2021-04-08 15:12:04 -04:00
Leo Famulari adb4c05aa6
gnu: linux-libre: Update to 5.11.12.
* gnu/packages/linux.scm (linux-libre-5.11-version): Update to 5.11.12.
(linux-libre-5.11-pristine-source): Update hash.
2021-04-08 15:12:04 -04:00
Maxim Cournoyer bdc96f6e0e
system: vm: Set a larger value for the msize option of the 9p file system.
Fixes <https://issues.guix.gnu.org/47225>.

* gnu/system/vm.scm (%default-msize-value): New variable.
(%linux-vm-file-systems): Use it as the value of the msize option.
(mapping->file-system): Likewise.

Reported-by: Leo Famulari <leo@famulari.name>
2021-04-08 15:12:01 -04:00
Mathieu Othacehe 2afc79b51d
ci: Introduce new subsets.
Introduce 'images, 'system-tests and 'tarball subsets.

* gnu/ci.scm (cuirass-jobs): Break the 'all subset into smaller subsets.
2021-04-08 15:24:03 +02:00
Mathieu Othacehe 14ada96451
ci: Remove the job period argument.
Cuirass now deals with periodicity directly on specifications.

* gnu/ci.scm (derivation->job): Remove the period argument.
(image-jobs, system-test-jobs, tarball-jobs): Adapt them.
2021-04-08 15:24:03 +02:00
Ricardo Wurmus 5f0c3535aa
gnu: r-genomicfeatures: Update to 1.42.3.
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.42.3.
2021-04-08 13:28:24 +02:00
Ricardo Wurmus e0147aa46f
gnu: r-gviz: Update to 1.34.1.
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.34.1.
2021-04-08 13:28:24 +02:00
Ricardo Wurmus 14a4c30828
gnu: r-universalmotif: Update to 1.8.4.
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.8.4.
2021-04-08 13:28:24 +02:00
Ricardo Wurmus 8a7933f37e
gnu: r-rsubread: Update to 2.4.3.
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.4.3.
2021-04-08 13:28:24 +02:00
Ricardo Wurmus 215b0ced02
gnu: r-chippeakanno: Update to 3.24.2.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.24.2.
[propagated-inputs]: Add r-dplyr.
2021-04-08 13:28:24 +02:00
Ricardo Wurmus 55185f9b3f
gnu: r-diffbind: Update to 3.0.15.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.0.15.
2021-04-08 13:28:24 +02:00
Ricardo Wurmus 9d2ca98213
gnu: r-genomeinfodb: Update to 1.26.6.
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.26.6.
2021-04-08 13:28:24 +02:00
Ricardo Wurmus fb73d7d10d
gnu: r-delayedarray: Update to 0.16.3.
* gnu/packages/bioconductor.scm (r-delayedarray): Update to 0.16.3.
2021-04-08 13:28:23 +02:00
Paul Garlick 71ca8fd40b
gnu: Add texlive-mweights.
* gnu/packages/tex.scm: New variable.
2021-04-08 11:18:06 +01:00
Morgan Smith bb4f47a7f6
gnu: axoloti-runtime: Simplify build.
* gnu/packages/axoloti.scm (axoloti-runtime)[arguments]: Remove
unnecessary environment variable assignments in custom 'build phase.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-04-08 11:00:05 +03:00
Morgan Smith 5c9954490c
gnu: gcc-arm-none-eabi: Fix C++ header location.
Previously the C++ headers where installed in the include folder, overwriting
some C headers.

* gnu/packages/embedded.scm (gcc-arm-none-eabi-4.9)
[native-search-paths]: Add C++ header locations.
(gcc-arm-none-eabi-7-2018-q2-update)[native-search-paths]: Add C++
header locations.
(make-libstdc++-arm-none-eabi)[arguments]: Change C++ header install
location to include/c++.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-04-08 10:58:54 +03:00
Ricardo Wurmus e1a38cbad8
gnu: r-sn: Update to 2.0.0.
* gnu/packages/statistics.scm (r-sn): Update to 2.0.0.
2021-04-08 03:10:13 +02:00
Ricardo Wurmus 2e36f4a1c4
gnu: r-sfsmisc: Update to 1.1-10.
* gnu/packages/statistics.scm (r-sfsmisc): Update to 1.1-10.
2021-04-08 03:10:13 +02:00
Ricardo Wurmus 9493b3e9a7
gnu: r-e1071: Update to 1.7-6.
* gnu/packages/statistics.scm (r-e1071): Update to 1.7-6.
[propagated-inputs]: Add r-proxy.
2021-04-08 03:10:13 +02:00
Ricardo Wurmus d98cecdd07
gnu: r-xml: Update to 3.99-0.6.
* gnu/packages/statistics.scm (r-xml): Update to 3.99-0.6.
2021-04-08 03:10:13 +02:00
Ricardo Wurmus d6fd6908c2
gnu: r-rsqlite: Update to 2.2.5.
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.2.5.
2021-04-08 03:10:13 +02:00
Ricardo Wurmus e2851d10db
gnu: r-catools: Update to 1.18.2.
* gnu/packages/statistics.scm (r-catools): Update to 1.18.2.
2021-04-08 03:10:13 +02:00
Ricardo Wurmus 63c5888c43
gnu: r-dbplyr: Update to 2.1.1.
* gnu/packages/statistics.scm (r-dbplyr): Update to 2.1.1.
2021-04-08 03:10:13 +02:00
Ricardo Wurmus 55378aa21d
gnu: r-survival: Update to 3.2-10.
* gnu/packages/statistics.scm (r-survival): Update to 3.2-10.
2021-04-08 03:10:13 +02:00
Ricardo Wurmus 971a997f75
gnu: r-stars: Update to 0.5-2.
* gnu/packages/cran.scm (r-stars): Update to 0.5-2.
2021-04-08 03:10:13 +02:00
Ricardo Wurmus 0ec1b08a52
gnu: r-lwgeom: Update to 0.2-6.
* gnu/packages/cran.scm (r-lwgeom): Update to 0.2-6.
[inputs]: Add zlib.
2021-04-08 03:10:13 +02:00
Ricardo Wurmus 5a2602032f
gnu: r-ragg: Update to 1.1.2.
* gnu/packages/cran.scm (r-ragg): Update to 1.1.2.
2021-04-08 03:10:13 +02:00
Ricardo Wurmus ded1599829
gnu: r-textshaping: Update to 0.3.3.
* gnu/packages/cran.scm (r-textshaping): Update to 0.3.3.
2021-04-08 03:10:13 +02:00
Ricardo Wurmus 2224e02779
gnu: r-bbotk: Update to 0.3.2.
* gnu/packages/cran.scm (r-bbotk): Update to 0.3.2.
2021-04-08 03:10:13 +02:00
Ricardo Wurmus 6ec08e19b3
gnu: r-mlr3learners: Update to 0.4.5.
* gnu/packages/cran.scm (r-mlr3learners): Update to 0.4.5.
2021-04-08 03:10:12 +02:00
Ricardo Wurmus ae3df456bb
gnu: r-mlr3misc: Update to 0.8.0.
* gnu/packages/cran.scm (r-mlr3misc): Update to 0.8.0.
2021-04-08 03:10:12 +02:00
Ricardo Wurmus b83b2a3a4b
gnu: r-phangorn: Update to 2.6.3.
* gnu/packages/cran.scm (r-phangorn): Update to 2.6.3.
[native-inputs]: Add r-knitr.
2021-04-08 03:10:12 +02:00
Ricardo Wurmus 6e93ab0666
gnu: r-qtl: Update to 1.48-1.
* gnu/packages/cran.scm (r-qtl): Update to 1.48-1.
2021-04-08 03:10:12 +02:00
Ricardo Wurmus 3ba3fb71fb
gnu: r-altmeta: Update to 3.3.
* gnu/packages/cran.scm (r-altmeta): Update to 3.3.
2021-04-08 03:10:12 +02:00
Ricardo Wurmus ed5f5f0274
gnu: r-tidyposterior: Update to 0.1.0.
* gnu/packages/cran.scm (r-tidyposterior): Update to 0.1.0.
[propagated-inputs]: Remove r-lifecycle; add r-tune and r-workflowsets.
2021-04-08 03:10:12 +02:00
Ricardo Wurmus 7ac3cefc64
gnu: r-slider: Update to 0.2.1.
* gnu/packages/cran.scm (r-slider): Update to 0.2.1.
[propagated-inputs]: Add r-ellipsis.
2021-04-08 03:10:12 +02:00
Ricardo Wurmus 47d8e0c1ad
gnu: r-yardstick: Update to 0.0.8.
* gnu/packages/cran.scm (r-yardstick): Update to 0.0.8.
[propagated-inputs]: Add r-vctrs.
2021-04-08 03:10:12 +02:00
Ricardo Wurmus f5c72b2cd7
gnu: r-muhaz: Update to 1.2.6.3.
* gnu/packages/cran.scm (r-muhaz): Update to 1.2.6.3.
2021-04-08 03:10:12 +02:00
Ricardo Wurmus 3974902362
gnu: r-cpp11: Update to 0.2.7.
* gnu/packages/cran.scm (r-cpp11): Update to 0.2.7.
2021-04-08 03:10:12 +02:00
Ricardo Wurmus a387de2fa7
gnu: r-spatstat: Update to 2.1-0.
* gnu/packages/cran.scm (r-spatstat): Update to 2.1-0.
2021-04-08 03:10:12 +02:00
Ricardo Wurmus 3069514325
gnu: r-spatstat-linnet: Update to 2.1-1.
* gnu/packages/cran.scm (r-spatstat-linnet): Update to 2.1-1.
2021-04-08 03:10:11 +02:00
Ricardo Wurmus 2ef03976f3
gnu: r-spatstat-core: Update to 2.0-0.
* gnu/packages/cran.scm (r-spatstat-core): Update to 2.0-0.
2021-04-08 03:10:11 +02:00
Ricardo Wurmus b6aa3ada62
gnu: r-spatstat-geom: Update to 2.0-1.
* gnu/packages/cran.scm (r-spatstat-geom): Update to 2.0-1.
[propagated-inputs]: Remove r-spatstat-sparse.
2021-04-08 03:10:11 +02:00
Ricardo Wurmus 8561ce6a8c
gnu: r-spatstat-data: Update to 2.1-0.
* gnu/packages/cran.scm (r-spatstat-data): Update to 2.1-0.
2021-04-08 03:10:11 +02:00
Ricardo Wurmus 1134bab6d0
gnu: r-spatstat-sparse: Update to 2.0-0.
* gnu/packages/cran.scm (r-spatstat-sparse): Update to 2.0-0.
2021-04-08 03:10:11 +02:00
Ricardo Wurmus 35654c7285
gnu: r-spatstat-utils: Update to 2.1-0.
* gnu/packages/cran.scm (r-spatstat-utils): Update to 2.1-0.
2021-04-08 03:10:11 +02:00
Ricardo Wurmus 213d7e7649
gnu: r-shapforxgboost: Update to 0.1.1.
* gnu/packages/cran.scm (r-shapforxgboost): Update to 0.1.1.
[propagated-inputs]: Remove r-lightgbm.
[native-inputs]: Add r-knitr.
2021-04-08 03:10:11 +02:00
Ricardo Wurmus e138e27410
gnu: r-lightgbm: Update to 3.2.0.
* gnu/packages/cran.scm (r-lightgbm): Update to 3.2.0.
2021-04-08 03:10:11 +02:00
Ricardo Wurmus 13747f5814
gnu: r-latex2exp: Update to 0.5.0.
* gnu/packages/cran.scm (r-latex2exp): Update to 0.5.0.
[native-inputs]: Add r-knitr.
2021-04-08 03:10:11 +02:00
Ricardo Wurmus 3a849bf973
gnu: r-packrat: Update to 0.6.0.
* gnu/packages/cran.scm (r-packrat): Update to 0.6.0.
2021-04-08 03:10:11 +02:00
Ricardo Wurmus 13aca4c035
gnu: r-quanteda: Update to 3.0.0.
* gnu/packages/cran.scm (r-quanteda): Update to 3.0.0.
[propagated-inputs]: Remove r-data-table, r-digest, r-extrafont, r-ggplot2,
r-ggrepel, r-jsonlite, r-network, r-proxyc, and r-sna.
2021-04-08 03:10:11 +02:00
Ricardo Wurmus f3785d8a1f
gnu: r-shapes: Update to 1.2.6.
* gnu/packages/cran.scm (r-shapes): Update to 1.2.6.
2021-04-08 03:10:11 +02:00
Ricardo Wurmus 83f2c14790
gnu: r-univoutl: Update to 0.3.
* gnu/packages/cran.scm (r-univoutl): Update to 0.3.
2021-04-08 03:10:10 +02:00
Ricardo Wurmus b615567e4f
gnu: r-imager: Update to 0.42.8.
* gnu/packages/cran.scm (r-imager): Update to 0.42.8.
2021-04-08 03:10:10 +02:00
Ricardo Wurmus c3ebc726cd
gnu: r-actuar: Update to 3.1-2.
* gnu/packages/cran.scm (r-actuar): Update to 3.1-2.
2021-04-08 03:10:10 +02:00
Ricardo Wurmus ab5850c7d9
gnu: r-gamlss: Update to 5.3-4.
* gnu/packages/cran.scm (r-gamlss): Update to 5.3-4.
2021-04-08 03:10:10 +02:00
Ricardo Wurmus bc65d86b94
gnu: r-gamlss-data: Update to 6.0-1.
* gnu/packages/cran.scm (r-gamlss-data): Update to 6.0-1.
2021-04-08 03:10:10 +02:00
Ricardo Wurmus ca88d9c027
gnu: r-dalex: Update to 2.2.0.
* gnu/packages/cran.scm (r-dalex): Update to 2.2.0.
2021-04-08 03:10:10 +02:00
Ricardo Wurmus ad59fd9e60
gnu: r-dae: Update to 3.1-37.
* gnu/packages/cran.scm (r-dae): Update to 3.1-37.
2021-04-08 03:10:10 +02:00
Ricardo Wurmus 3cfed8ca6a
gnu: r-styler: Update to 1.4.1.
* gnu/packages/cran.scm (r-styler): Update to 1.4.1.
[native-inputs]: Add r-knitr.
2021-04-08 03:10:10 +02:00
Ricardo Wurmus 455f5339db
gnu: r-tweenr: Update to 1.0.2.
* gnu/packages/cran.scm (r-tweenr): Update to 1.0.2.
2021-04-08 03:10:10 +02:00
Ricardo Wurmus 6b575bfd19
gnu: r-rms: Update to 6.2-0.
* gnu/packages/cran.scm (r-rms): Update to 6.2-0.
2021-04-08 03:10:10 +02:00
Ricardo Wurmus ba22116deb
gnu: r-spdep: Update to 1.1-7.
* gnu/packages/cran.scm (r-spdep): Update to 1.1-7.
2021-04-08 03:10:09 +02:00
Ricardo Wurmus b5b7975fa1
gnu: r-sf: Update to 0.9-8.
* gnu/packages/cran.scm (r-sf): Update to 0.9-8.
2021-04-08 03:10:09 +02:00
Ricardo Wurmus 24e9b0cee9
gnu: r-units: Update to 0.7-1.
* gnu/packages/cran.scm (r-units): Update to 0.7-1.
2021-04-08 03:10:09 +02:00
Ricardo Wurmus dd3b0dd9b8
gnu: r-rmpfr: Update to 0.8-3.
* gnu/packages/cran.scm (r-rmpfr): Update to 0.8-3.
2021-04-08 03:10:09 +02:00
Ricardo Wurmus 1efeb891ad
gnu: r-gargle: Update to 1.1.0.
* gnu/packages/cran.scm (r-gargle): Update to 1.1.0.
[propagated-inputs]: Add r-cli, r-rappdirs, and r-rstudioapi.
2021-04-08 03:10:09 +02:00
Ricardo Wurmus d47d3c9c9f
gnu: r-tiff: Update to 0.1-8.
* gnu/packages/cran.scm (r-tiff): Update to 0.1-8.
[native-inputs]: Add pkg-config.
2021-04-08 03:10:09 +02:00
Ricardo Wurmus 3626d06745
gnu: r-biocmanager: Update to 1.30.12.
* gnu/packages/cran.scm (r-biocmanager): Update to 1.30.12.
[native-inputs]: Add r-knitr.
2021-04-08 03:10:09 +02:00
Ricardo Wurmus 77ca025cfe
gnu: r-summarytools: Update to 0.9.9.
* gnu/packages/cran.scm (r-summarytools): Update to 0.9.9.
2021-04-08 03:10:09 +02:00
Ricardo Wurmus c9dbd36856
gnu: r-remotes: Update to 2.3.0.
* gnu/packages/cran.scm (r-remotes): Update to 2.3.0.
2021-04-08 03:10:09 +02:00
Ricardo Wurmus 43f88bc36d
gnu: r-gert: Update to 1.3.0.
* gnu/packages/cran.scm (r-gert): Update to 1.3.0.
2021-04-08 03:10:09 +02:00
Ricardo Wurmus 8917f29fba
gnu: r-gh: Update to 1.2.1.
* gnu/packages/cran.scm (r-gh): Update to 1.2.1.
2021-04-08 03:10:08 +02:00
Ricardo Wurmus 799526f97c
gnu: r-effectsize: Update to 0.4.4-1.
* gnu/packages/cran.scm (r-effectsize): Update to 0.4.4-1.
2021-04-08 03:10:08 +02:00
Ricardo Wurmus 51d9bcf64b
gnu: r-ggeffects: Update to 1.0.2.
* gnu/packages/cran.scm (r-ggeffects): Update to 1.0.2.
2021-04-08 03:10:08 +02:00
Ricardo Wurmus 8f0c5bd3eb
gnu: r-emmeans: Update to 1.5.5-1.
* gnu/packages/cran.scm (r-emmeans): Update to 1.5.5-1.
2021-04-08 03:10:08 +02:00
Ricardo Wurmus f1d038bd0e
gnu: r-magick: Update to 2.7.1.
* gnu/packages/cran.scm (r-magick): Update to 2.7.1.
2021-04-08 03:10:08 +02:00
Ricardo Wurmus 60f6aa20e9
gnu: r-insight: Update to 0.13.2.
* gnu/packages/cran.scm (r-insight): Update to 0.13.2.
2021-04-08 03:10:08 +02:00
Ricardo Wurmus d54765907c
gnu: r-officer: Update to 0.3.18.
* gnu/packages/cran.scm (r-officer): Update to 0.3.18.
2021-04-08 03:10:08 +02:00
Ricardo Wurmus d62f9f8de6
gnu: r-rbibutils: Update to 2.1.
* gnu/packages/cran.scm (r-rbibutils): Update to 2.1.
2021-04-08 03:10:08 +02:00
Ricardo Wurmus 74554d5269
gnu: r-renv: Update to 0.13.2.
* gnu/packages/cran.scm (r-renv): Update to 0.13.2.
2021-04-08 03:10:08 +02:00
Ricardo Wurmus 3d7e85a832
gnu: r-rastervis: Update to 0.50.1.
* gnu/packages/cran.scm (r-rastervis): Update to 0.50.1.
2021-04-08 03:10:08 +02:00
Ricardo Wurmus 0795807434
gnu: r-arules: Update to 1.6-7.
* gnu/packages/cran.scm (r-arules): Update to 1.6-7.
2021-04-08 03:10:07 +02:00
Ricardo Wurmus f802ddb242
gnu: r-sapa: Update to 2.0-3.
* gnu/packages/cran.scm (r-sapa): Update to 2.0-3.
2021-04-08 03:10:07 +02:00
Ricardo Wurmus 5666f99199
gnu: r-tinytex: Update to 0.31.
* gnu/packages/cran.scm (r-tinytex): Update to 0.31.
2021-04-08 03:10:07 +02:00
Ricardo Wurmus 69c18192d7
gnu: r-vctrs: Update to 0.3.7.
* gnu/packages/cran.scm (r-vctrs): Update to 0.3.7.
[propagated-inputs]: Remove r-digest.
2021-04-08 03:10:07 +02:00
Ricardo Wurmus ab9531e3b7
gnu: r-processx: Update to 3.5.1.
* gnu/packages/cran.scm (r-processx): Update to 3.5.1.
2021-04-08 03:10:07 +02:00
Ricardo Wurmus db62940b13
gnu: r-cli: Update to 2.4.0.
* gnu/packages/cran.scm (r-cli): Update to 2.4.0.
[propagated-inputs]: Remove r-assertthat.
2021-04-08 03:10:07 +02:00
Ricardo Wurmus c6976608be
gnu: r-vioplot: Update to 0.3.6.
* gnu/packages/cran.scm (r-vioplot): Update to 0.3.6.
2021-04-08 03:10:07 +02:00
Ricardo Wurmus bd005c093a
gnu: r-broom: Update to 0.7.6.
* gnu/packages/cran.scm (r-broom): Update to 0.7.6.
2021-04-08 03:10:07 +02:00
Ricardo Wurmus 667f719b44
gnu: r-psych: Update to 2.1.3.
* gnu/packages/cran.scm (r-psych): Update to 2.1.3.
[native-inputs]: Add r-knitr.
2021-04-08 03:10:07 +02:00
Ricardo Wurmus 2eafe4ee97
gnu: r-callr: Update to 3.6.0.
* gnu/packages/cran.scm (r-callr): Update to 3.6.0.
2021-04-08 03:10:07 +02:00
Ricardo Wurmus 183e3b413c
gnu: r-reprex: Update to 2.0.0.
* gnu/packages/cran.scm (r-reprex): Update to 2.0.0.
[propagated-inputs]: Add r-rstudioapi.
2021-04-08 03:10:07 +02:00
Ricardo Wurmus 3e30068225
gnu: r-oenb: Update to 0.0.2.
* gnu/packages/cran.scm (r-oenb): Update to 0.0.2.
2021-04-08 03:10:06 +02:00
Ricardo Wurmus c55b81d99f
gnu: r-ggpmisc: Update to 0.3.9.
* gnu/packages/cran.scm (r-ggpmisc): Update to 0.3.9.
2021-04-08 03:10:06 +02:00
Ricardo Wurmus 08462c02c2
gnu: r-diffobj: Update to 0.3.4.
* gnu/packages/cran.scm (r-diffobj): Update to 0.3.4.
2021-04-08 03:10:06 +02:00
Ricardo Wurmus a2b1c149df
gnu: Add r-workflowsets.
* gnu/packages/cran.scm (r-workflowsets): New variable.
2021-04-08 03:10:06 +02:00
Ricardo Wurmus 3118fde135
gnu: r-seurat: Update to 4.0.1.
* gnu/packages/cran.scm (r-seurat): Update to 4.0.1.
[arguments]: Remove.
[propagated-inputs]: Replace r-spatstat with r-spatstat-core and
r-spatstat-geom.
2021-04-08 03:10:06 +02:00
Tobias Geerinckx-Rice 2ffd92abf2
gnu: libxlsxwriter: Update to 1.0.1.
* gnu/packages/xml.scm (libxlsxwriter): Update to 1.0.1.
2021-04-07 23:55:52 +02:00
Tobias Geerinckx-Rice 887531a231
gnu: nsd: Update to 4.3.6.
* gnu/packages/dns.scm (nsd): Update to 4.3.6.
2021-04-07 23:55:52 +02:00
Tobias Geerinckx-Rice 096897889f
gnu: solarus: Update to 1.6.5.
* gnu/packages/games.scm (solarus): Update to 1.6.5.
(solarus-quest-editor)[source]: Update hash.
[arguments]: Remove obsolete 'fix-qt-build phase.
2021-04-07 23:55:51 +02:00
David Thompson 1ccc5cfc38
gnu: tiled: Update to 1.5.0. 2021-04-07 17:09:50 -04:00
Tobias Geerinckx-Rice 43110e8d4e
gnu: youtube-dl: Update to 2021.04.07.
* gnu/packages/video.scm (youtube-dl): Update to 2021.04.07.
2021-04-07 21:38:21 +02:00
Tobias Geerinckx-Rice 2b605ef3b1
gnu: libupnp: Update to 1.14.5 [fixes CVE-2021-28302].
* gnu/packages/upnp.scm (libupnp): Update to 1.14.5.
2021-04-07 21:38:21 +02:00
Tobias Geerinckx-Rice 6b1b6b0ed0
gnu: nmrpflash: Update to 0.9.15.
* gnu/packages/admin.scm (nmrpflash): Update to 0.9.15.
2021-04-07 21:38:21 +02:00
Tobias Geerinckx-Rice 0bc6ae5843
gnu: tmux-xpanes: Update to 4.1.3.
* gnu/packages/tmux.scm (tmux-xpanes): Update to 4.1.3.
2021-04-07 21:38:20 +02:00
Paul Garlick 2d77c270f4
gnu: Add texlive-fontaxes.
* gnu/packages/tex.scm: New variable.
2021-04-07 18:51:02 +01:00
Pierre Neidhardt 8a32b6a542
gnu: sbcl-cl-webkit: Update to 20210407.
* gnu/packages/lisp-xyz.scm (sbcl-cl-webkit): Update to 20210407.
2021-04-07 19:31:57 +02:00
Mathieu Othacehe 37d8def701
gnu: cuirass: Update to 1.0.0-7.1b35a77.
* gnu/packages/ci.scm (cuirass): Update to 1.0.0-7.1b35a77.
2021-04-07 15:28:08 +02:00
Alexandru-Sergiu Marton a060977239
gnu: Add entt.
* gnu/packages/cpp.scm (entt): New variable.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-04-07 13:43:40 +02:00
Mathieu Othacehe a121f4c54a
gnu: cuirass: Update to 1.0.0-6.ec0be96.
* gnu/packages/ci.scm (cuirass): Update to 1.0.0-6.ec0be96.
2021-04-07 11:57:34 +02:00
Tobias Geerinckx-Rice d3184ee437
gnu: di: Update to 4.50.
* gnu/packages/admin.scm (di): Update to 4.50.
2021-04-07 00:55:46 +02:00
Tobias Geerinckx-Rice b0a53c5268
gnu: mpv: Update to 0.33.1.
* gnu/packages/video.scm (mpv): Update to 0.33.1.
2021-04-07 00:55:46 +02:00
Tobias Geerinckx-Rice d6f0987669
gnu: tmux-xpanes: Update to 4.1.2.
* gnu/packages/tmux.scm (tmux-xpanes): Update to 4.1.2.
2021-04-07 00:55:46 +02:00
Tobias Geerinckx-Rice 08512512ea
gnu: stunnel: Update to 5.59.
* gnu/packages/web.scm (stunnel): Update to 5.59.
2021-04-07 00:55:46 +02:00
Tobias Geerinckx-Rice 8e4d44ad39
gnu: Add cfm.
* gnu/packages/admin.scm (cfm): New public variable.
2021-04-07 00:55:45 +02:00
Sharlatan Hellseher ee9c44c767
gnu: Add camlidl.
* gnu/packages/ocaml.scm (camlidl): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-04-06 23:59:47 +02:00
Alexey Abramov 5a6e27bfbd
services: dovecot: Fix serialization of a free-form-args arguments.
* gnu/services/mail.scm (serialize-free-form-args): Change destination and
return a string containing the formated text.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-04-06 23:59:47 +02:00
Alexey Abramov 66d8dc3d74
gnu: Add opensmtpd-filter-rspamd.
* gnu/packages/mail.scm (opensmtpd-filter-rspamd): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-04-06 23:59:46 +02:00
Maxim Cournoyer 8515a506ca
gnu: qemu: Fix the Texinfo manual.
The makeinfo command splits the generated info output in multiple files (in
300 KiB chunks) by default; this meant the build system would have had to
install the multiple QEMU.info-1, QEMU.info-2, etc. files for the info manual
to work as intended.  Instead, keep the info manual as one single file by
specifying the --no-split option to makeinfo.

* gnu/packages/patches/qemu-build-info-manual.patch (sphinxinfo)
<makeinfo>: Invoke with the --no-split argument.
2021-04-06 16:56:08 -04:00
Léo Le Bouter 41d0b233ba
gnu: umoci: Update to 0.4.7 [fixes CVE-2021-29136].
* gnu/packages/virtualization.scm (umoci): Update to 0.4.7.
2021-04-06 21:00:46 +02:00
Maxim Cournoyer 87aaccbf55
gnu: emacs-php-mode: Fix installation prefix.
* gnu/packages/emacs-xyz.scm (emacs-php-mode)
[include]: Remove argument.
[phases]{add-lisp-dir-to-emacs-load-path}: Remove phase.
{enter-source-directory}: Add phase.
2021-04-06 14:06:55 -04:00
Franck Pérignon 5fd046cbfd
gnu: Add scotch and pt-scotch with shared libraries
* gnu/packages/maths.scm (scotch-shared, pt-scotch-shared): New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
2021-04-06 13:54:09 -04:00
Léo Le Bouter 1467080de4
gnu: python-django-2.2: Update to 2.2.20 [security fixes].
* gnu/packages/django.scm (python-django-2.2): Update to 2.2.20.
2021-04-06 19:16:16 +02:00
Léo Le Bouter 26f34f3de4
gnu: python-django: Update to 3.1.8 [security fixes].
* gnu/packages/django.scm (python-django): Update to 3.1.8.
2021-04-06 19:15:35 +02:00
Guillaume Le Vaillant 535417a6cb
gnu: bitcoin-unlimited: Use new source repository.
* gnu/packages/finance.scm (bitcoin-unlimited)[source]: Update git repository
  URL.
2021-04-06 15:23:41 +02:00
Guillaume Le Vaillant bed31da50d
gnu: bitcoin-unlimited: Update to 1.9.1.1.
* gnu/packages/finance.scm (bitcoin-unlimited): Update to 1.9.1.1.
2021-04-06 15:23:41 +02:00
Pierre Neidhardt 05a5e222e9
gnu: sbcl-cl-webkit: Update to 20210406.
* gnu/packages/lisp-xyz.scm (sbcl-cl-webkit): Update to 20210406.
2021-04-06 14:49:40 +02:00
Guillaume Le Vaillant c6eb6d471d
gnu: txr: Update to 255.
* gnu/packages/lisp.scm (txr): Update to 255.
2021-04-06 14:04:20 +02:00
Léo Le Bouter a7f1243324
gnu: libpano13: Update to 2.9.20_rc3 [security fixes].
Fixes at least CVE-2021-20307.

* gnu/packages/photo.scm (libpano13): Update to 2.9.20_rc3.
2021-04-06 12:27:48 +02:00
Lars-Dominik Braun 14392c7789
gnu: python-tortoise-orm: Fix dependencies.
* gnu/packages/databases.scm (python-tortoise-orm) [propagated-inputs]:
Add missing dependency.
[arguments]: Relax pytz version requirement, remove iso8601 requirement.
2021-04-06 10:57:19 +02:00
Ron Nazarov via Guix-patches via ab0ed26eb7
gnu: Add node-wrappy.
* gnu/packages/node-xyz.scm (node-wrappy): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2021-04-05 17:22:28 -04:00
Guillaume Le Vaillant 561017f838
gnu: Add welle-io.
* gnu/packages/radio.scm (welle-io): New variable.
2021-04-05 21:01:42 +02:00
Guillaume Le Vaillant 92ff287e74
gnu: Add dream.
* gnu/packages/radio.scm (dream): New variable.
2021-04-05 21:01:42 +02:00
Pierre Langlois 653faaebd6
gnu: virt-manager: Update to 3.2.0.
* gnu/packages/virtualization.scm (virt-manager): Update to 3.2.0.
[arguments]: Remove #:test-target.  Remove fix-qemu-img-reference phase.
Adapt check phase to use pytest, although they still do not run.
[native-inputs]: Add python-docutils.  Suggest adding python-pytest to enable
tests.
2021-04-05 18:26:37 +01:00
Pierre Langlois 29383ecc8c
gnu: libvirt-glib: Update to 4.0.0.
* gnu/packages/virtualization.scm (libvirt-glib): Update to 4.0.0.
[build-system]: Switch to meson-build-system.
2021-04-05 18:26:37 +01:00
Pierre Langlois 28cc447fc5
gnu: python-libvirt: Update to 7.2.0.
* gnu/packages/virtualization.scm (python-libvirt): Update to 7.2.0.
2021-04-05 18:26:37 +01:00
Brice Waegeneire 0d4ae86bc2
gnu: libvirt: Update to 7.2.0.
* gnu/packages/virtualization.scm (libvirt): Update to 7.2.0.
[arguemnts]: Switch to meson, only build system supported by upstream.
[inputs]: Add libssh2 and readline.
[native-inputs]: Add bash-completion, gettext, python-docutils and
rpcsvc-proto.
* gnu/packages/patches/libvirt-add-install-prefix.patch: New file...
* gnu/local.mk: ...add it.
* gnu/packages/patches/libvirt-create-machine-cgroup.patch: Delete file,
merged by upstream.

Tested-by: Pierre Langlois <pierre.langlois@gmx.com>
2021-04-05 18:26:37 +01:00
Brice Waegeneire ee5c4f70b6
gnu: libvirt: Enable disk and directory storage.
* gnu/packages/virtualization.scm (libvirt)[inputs]: Add parted.
[arguments]: Add configure flags to support disk and directory storage.
2021-04-05 18:26:36 +01:00
Pierre Langlois 81f65a3a2c
tests: libvirt: Catch issues with incorrect /var and /etc in package.
* gnu/tests/virtualization.scm (run-libvirt-test): Chdir to "/tmp" before
running test.  Add "connect" test.
2021-04-05 18:26:36 +01:00
Leo Prikler 8b578c217f
gnu: crypto++: Update to 8.5.0.
* gnu/packages/crypto.scm (crypto++): Update to 8.5.0.
[origin]: Use git-fetch and git-reference.
2021-04-05 16:10:06 +02:00
Philip McGrath e29b1fff1d
gnu: chez-scheme: simplify packaging
Take advantage of patches that have been accepted upstream.
These changes lay a foundation for reusing more of Chez's
build process for Racket.

* gnu/packages/patches/chez-scheme-build-util-paths-backport.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/chez.scm (chez-scheme)[source](patches): Use it.
[source](snippet): Remove bundled libraries here, not in configure phase.
[inputs]: Organize. Move "nanopass", "stex", and "xorg-rgb" to ...
[native-inputs]: ... this field.
[arguments]: Add (ice-9 ftw) to #:modules. Remove unneeded
'patch-processor-detection' phase. Add 'unpack-nanopass+stex' phase
(refactored from 'configure'). Simplify 'configure' phase by removing
patches that have been upstreamed. Add "--nogzip-man-pages" flag so we can
remove 'make-manpages-writable' phase. Stop ignoring #:configure-flags,
move "--threads" there, and remove unneeded workaround. Add 'prepare-stex'
phase (refactored from 'install-doc'). Use it to streamline 'install-doc'
phase, installing all of the right files into the right places.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-04-05 16:10:06 +02:00
Philip McGrath 6f71fd4a5e
gnu: chez-scheme: Update stex.
Get a patch from upstream that will help us simplify the build process
for the Chez Scheme documentation.

* gnu/packages/chez.scm (chez-stex): Update to commit 5405149.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-04-05 16:10:06 +02:00
Philip McGrath d8e6486877
gnu: chez-scheme: Update nanopass to 1.9.2.
* gnu/packages/chez.scm (nanopass): Update nanopass to 1.9.2.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-04-05 16:10:06 +02:00
Tobias Geerinckx-Rice fffa137e6e
gnu: perl-net-cidr-lite: Update to 0.22 [security fixes].
* gnu/packages/networking.scm (perl-net-cidr-lite): Update to 0.22.
2021-04-05 15:48:09 +02:00
Efraim Flashner b6acaa1c2e
gnu: go-github-com-puerkitobio-goquery: Adjust inputs.
* gnu/packages/golang.scm (go-github-com-puerkitobio-goquery)
[native-inputs]: Move all inputs ...
[propagated-inputs]: ... to here.
2021-04-05 15:54:23 +03:00