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Author SHA1 Message Date
Andreas Enge 6cdb6cc6ef
gnu: gecode: Downgrade to 6.2.0-2.2d20e88. 
This is a commit with which the dependent package minizinc builds
successfully.

* gnu/packages/maths.scm (gecode): Downgrade to 6.2.0-2.2d20e88.

Change-Id: I0bdb0131374639b1664e6ec40374d51b6922094c
 2024-05-15 14:35:07 +02:00
Andreas Enge 12d23e3ac9
gnu: gecode: Use gexps. 
* gnu/packages/maths.scm (gecode): Use gexps. Reindent package.

Change-Id: I5a644d25f2d62c3245b0770fe99c20c3ef380ffc
 2024-05-15 14:35:07 +02:00
Artyom V. Poptsov 75f3cca50a
gnu: python-pivy: Update to 0.6.8. 
* gnu/packages/python-xyz.scm (python-pivy): Update to 0.6.8.

Change-Id: I7375a8261bd24ae1c2f54c6889e1a39d6db93468
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2024-05-15 13:53:46 +02:00
Artyom V. Poptsov d8d0fdd25c
gnu: python-pivy: Fix build. 
"python-pivy" build fails when "soqt" is in the inputs (see
<https://bugs.gentoo.org/920482>.)

* gnu/packages/python-xyz.scm (python-pivy): Fix build.
  [inputs]: Remove "soqt".
  [arguments]: Use gexps.

Change-Id: If332ccd42b3a373e7b4118f3bcbc3646e8b59d41
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2024-05-15 13:49:01 +02:00
Nicolas Graves 5c90e7d6d9
gnu: qgis: Update to 3.34.6. 
* gnu/packages/geo.scm (qgis): Update to 3.34.6.
  [arguments]<#:phases>: Update failing tests list.
  [inputs]: Add draco, freexl, librttopo, minizip, pdal, qt3d-5.

Change-Id: If453a6c7451a63ab7b03f3cd0f36aef844acfb15
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2024-05-15 13:43:42 +02:00
Nicolas Graves 65f58ade59
gnu: qgis: Improve package style. 
* gnu/packages/geo.scm (qgis)[arguments]<#:phases>: Extract
ignored-tests to make them more readable. Re-indent.

Change-Id: I2373bba49b9d21ff7dfa0014cf34fafa0e1f3175
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2024-05-15 13:43:42 +02:00
Nicolas Graves dcc278885c
gnu: qgis: Improve package style. 
* gnu/packages/geo.scm (qgis)[arguments]: Use gexp.

Change-Id: Ib72ae48ca0895109548e676c6da2d80ac2e1eca6
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2024-05-15 13:43:42 +02:00
Andreas Enge 125fcf9f69
gnu: gecode: Update to 6.2.0-1.f7f0d7c. 
* gnu/packages/maths.scm (gecode): Update to 6.2.0-1.f7f0d7c.

Change-Id: I48b77da2957a08850215aa02a77a845052bf26f7
 2024-05-15 13:06:44 +02:00
Herman Rimm 4b10015a12
gnu: Add chuffed. 
* gnu/packages/maths.scm (chuffed): Add variable.

Co-authored-by: Andreas Enge <andreas@enge.fr>

Change-Id: I77fc1ceb9caa42833689fba771010aeb38443e5e
 2024-05-15 13:05:03 +02:00
Sharlatan Hellseher 83289a64ec
gnu: python-lazy-loader: Update to 0.4. 
This fixes python-scikit-image build failure as seen in
<https://ci.guix.gnu.org/build/4357310/log/raw>.

* gnu/packages/python-xyz.scm (python-lazy-loader): Update to 0.4.
[native-inputs]: Remove python-pre-commit and python-pytest-cov; add python-numpy.

Change-Id: Ie236fb30fd505fed1e07fd236403f9f456a37f29
 2024-05-15 11:08:02 +01:00
Vinicius Monego 345a176a90
gnu: Add draco. 
* gnu/packages/compression.scm (draco): New variable.

Change-Id: Ibba9180ac2ee176aa445684472fa7d34327f8ce5
Co-authored-by: Nicolas Graves <ngraves@ngraves.fr>
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2024-05-15 11:56:29 +02:00
Vinicius Monego 7f4c9fe530
gnu: Add tinygltf. 
* gnu/packages/graphics.scm (tinygltf): New variable.

Change-Id: I749ced85142b8dd2ebbe916533f27bf6d167bbff
Co-authored-by: Nicolas Graves <ngraves@ngraves.fr>
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2024-05-15 11:48:39 +02:00
Ricardo Wurmus 2b161f6130
gnu: pigx-rnaseq: Update to 0.1.1. 
* gnu/packages/bioinformatics.scm (pigx-rnaseq): Update to 0.1.1.

Change-Id: I16db332e3559bed5b302f08bd85f31c6c40e9619
 2024-05-15 09:37:29 +02:00
Mark H Weaver 898b5f30f3
gnu: icecat: Update to 115.11.0-guix0-preview1 [security fixes]. 
Includes fixes for CVE-2024-4367, CVE-2024-4767, CVE-2024-4768,
CVE-2024-4769, CVE-2024-4770, and CVE-2024-4777.

* gnu/packages/gnuzilla.scm (%icecat-base-version, %icecat-build-id): Update.
(icecat-source): Update gnuzilla commit, base version, and hashes.
 2024-05-14 12:29:23 -04:00
Ashish SHUKLA 6e86089d56
gnu: kakoune: Update to 2024.05.09. 
* gnu/packages/text-editors.scm (kakoune): Update to 2024.05.09.

Change-Id: If6c1ea02304880d5ffa818e57f922f9d81c1bf5a
Signed-off-by: Christopher Baines <mail@cbaines.net>
 2024-05-14 12:05:25 +01:00
James Smith 55d6e9f73d
gnu: yamagi-quake2: Update to 8.30. 
* gnu/packages/games.scm (yamagi-quake2): Update to 8.30.

Change-Id: I6be99f7a87112544f0d23033e2ee99b308762bd3
Signed-off-by: Christopher Baines <mail@cbaines.net>
 2024-05-14 12:05:25 +01:00
Artyom V. Poptsov 85923f9eb4
gnu: guile-lib: Fix tests for Guile 2.2. 
* gnu/packages/guile-xyz.scm (guile-lib)[source]: Add a patch that fixes
tests for Guile 2.2.
* gnu/packages/patches/guile-lib-fix-tests-for-guile2.2.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add
"guile-lib-fix-tests-for-guile2.2.patch".

Change-Id: Ia340e1de57c56366f0ee9271687a89fb9e41bc2d
Signed-off-by: Christopher Baines <mail@cbaines.net>
 2024-05-14 12:05:25 +01:00
Artyom V. Poptsov b5e1121677
gnu: guile-lib: Remove "strip" phase. 
* gnu/packages/guile-xyz.scm (guile-lib) [arguments]: Remove "strip" phase.

Change-Id: I6158bdb58555be4e84a2571a2a6e59eb23d39abf
Signed-off-by: Christopher Baines <mail@cbaines.net>
 2024-05-14 12:05:25 +01:00
Andy Tai 61140300c2
gnu: xpra: Update to 6.0. 
* gnu/packages/xorg.scm (xpra): Update to 6.0.
[inputs]: Add xxhash.
[native-inputs]: Change python-cython to python-cython-3.
* gnu/packages/patches/xpra-6.0-install_libs.patch: New file.
* gnu/packages/patches/xpra-6.0-systemd-run.patch: New file.
* gnu/packages/patches/xpra-5.0-install_libs.patch: Removed.
* gnu/packages/patches/xpra-5.0-systemd-run.patch: Removed.
* gnu/local.mk (dist_patch_DATA): Update accordingly

Change-Id: Ic8ec98296220aebabb3d94951e11a3c957a8fcbc
Signed-off-by: Christopher Baines <mail@cbaines.net>
 2024-05-14 12:05:25 +01:00
Christopher Baines 49ec9f4ba3
gnu: guix: Update to 1.4.0-20.37719d3. 
* gnu/packages/package-management.scm (guix): Update to 1.4.0-20.37719d3.

Change-Id: Ib986456b9d5aebb2589cab2cb7fcd5fe4b5b9f37
 2024-05-14 12:05:22 +01:00
Nicolas Graves via Guix-patches via a682ddd708
gnu: Add emacs-helm-org-ql. 
* gnu/packages/emacs-xyz.scm (emacs-helm-org-ql): New variable.
(emacs-org-ql)[phases]: Add phase 'remove-helm-org-ql.
[propagated-inputs]: Remove emacs-helm, emacs-helm-org.

The author didn't mean to make the package depend on helm :
"Note that Helm is not declared as a package dependency, so this does
not cause Helm to be installed.", but the way we packaged it in Guix
did. Split the extension into a separate dependency instead, this
avoids 3 Mo to be propagated in a profile where it's not meant.

Change-Id: I3537c0b08cfffac3d66b761173761a3806497358
Signed-off-by: Andrew Tropin <andrew@trop.in>
 2024-05-14 13:58:05 +03:00
Dariqq 37719d3ec8
gnu: gnome-shell: Wrap screencast service. 
Adjust screencast such that GI_TYPELIB_PATH and GST_PLUGIN_SYSTEM_PATH refer
to all required typelibs and GStreamer plugins.  This alone is not enough to
make the screencast function however -- a running pipewire service (e.g.
via Guix Home) is also needed.

* gnu/packages/gnome.scm (gnome-shell):
[inputs]: Add gst-plugins-good and pipewire.
[#:phases]<'wrap-programs>: Wrap org.gnome.Shell.Screencast.

Change-Id: I2c31bf1bd92e281b86c57b06988c6a3793a58d40
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
 2024-05-14 07:09:00 +02:00
Liliana Marie Prikler 8cf823c17b
gnu: renpy: Update to 8.3.0. 
* gnu/packages/game-development.scm (python-renpy): Update to 8.3.0.
 2024-05-14 06:58:50 +02:00
Liliana Marie Prikler 55a5e509c3
gnu: python-pygame-sdl2: Update to 2.1.0+renpy8.3.0. 
* gnu/packages/game-development.scm (python-pygame-sdl2): Update to
2.1.0+renpy8.3.0.
 2024-05-14 06:58:50 +02:00
Liliana Marie Prikler 5da23b0d5c
gnu: Add python-clintest. 
* gnu/packages/potassco.scm (python-clintest): New variable.
 2024-05-14 06:58:50 +02:00
Ricardo Wurmus 0edbb93130
gnu: r-logspline: Update to 2.1.22. 
* gnu/packages/statistics.scm (r-logspline): Update to 2.1.22.

Change-Id: I08b684ab0f5a429923f3163353ccf7e9339de627
 2024-05-13 22:27:37 +02:00
Ricardo Wurmus 61bf9b8c0d
gnu: r-tclust: Update to 2.0-4. 
* gnu/packages/statistics.scm (r-tclust): Update to 2.0-4.

Change-Id: I5d2cabd4fbbbb7e540cfe129bbeb5e0e2b9f7a84
 2024-05-13 22:27:37 +02:00
Ricardo Wurmus 87273f874b
gnu: r-estimability: Update to 1.5.1. 
* gnu/packages/statistics.scm (r-estimability): Update to 1.5.1.

Change-Id: I1e0e9508b48a178ef7a241b14c86141aea5189ef
 2024-05-13 22:27:37 +02:00
Ricardo Wurmus 23342d2391
gnu: r-paws-storage: Update to 0.6.0. 
* gnu/packages/cran.scm (r-paws-storage): Update to 0.6.0.

Change-Id: I30a9e0cf35bbee39a01f4a794df66b75a44d2977
 2024-05-13 22:27:37 +02:00
Ricardo Wurmus 7e2aa84895
gnu: r-paws-database: Update to 0.6.0. 
* gnu/packages/cran.scm (r-paws-database): Update to 0.6.0.

Change-Id: I006c62cba2953e81175a3ce030b25a623b02d958
 2024-05-13 22:27:37 +02:00
Ricardo Wurmus 0d2df235ed
gnu: r-paws-networking: Update to 0.6.0. 
* gnu/packages/cran.scm (r-paws-networking): Update to 0.6.0.

Change-Id: I01b39db5292b96bb8b6c18ef721c03a410b858b2
 2024-05-13 22:27:37 +02:00
Ricardo Wurmus 72da34939c
gnu: r-paws-machine-learning: Update to 0.6.0. 
* gnu/packages/cran.scm (r-paws-machine-learning): Update to 0.6.0.

Change-Id: Idb88c0ad3b57bdd6680042e55dce54b5330a5304
 2024-05-13 22:27:37 +02:00
Ricardo Wurmus a2e5288373
gnu: r-paws-analytics: Update to 0.6.0. 
* gnu/packages/cran.scm (r-paws-analytics): Update to 0.6.0.

Change-Id: I5113ccaf37f395775e3053f4b5f4fb4fdcb34636
 2024-05-13 22:27:37 +02:00
Ricardo Wurmus ab98cdc12d
gnu: r-paws-application-integration: Update to 0.6.0. 
* gnu/packages/cran.scm (r-paws-application-integration): Update to 0.6.0.

Change-Id: Ia11603af5ca15f71f52e8527da104e932f22c5ad
 2024-05-13 22:27:37 +02:00
Ricardo Wurmus 74cd61d50e
gnu: r-paws-end-user-computing: Update to 0.6.0. 
* gnu/packages/cran.scm (r-paws-end-user-computing): Update to 0.6.0.

Change-Id: Iee934acf9078935edc19cdd64055949663e5f6ec
 2024-05-13 22:27:37 +02:00
Ricardo Wurmus 4f135eedcd
gnu: r-paws-developer-tools: Update to 0.6.0. 
* gnu/packages/cran.scm (r-paws-developer-tools): Update to 0.6.0.

Change-Id: I76076854850e76162bb212a1298f3a9ef4b97bfc
 2024-05-13 22:27:37 +02:00
Ricardo Wurmus d5c974f8cc
gnu: r-paws-customer-engagement: Update to 0.6.0. 
* gnu/packages/cran.scm (r-paws-customer-engagement): Update to 0.6.0.

Change-Id: Ib40afc8078d9771f602318d522be358e8b4d6bf9
 2024-05-13 22:27:37 +02:00
Ricardo Wurmus 63e9dc40c9
gnu: r-seurat: Update to 5.1.0. 
* gnu/packages/cran.scm (r-seurat): Update to 5.1.0.

Change-Id: I070c848853e26c3b8c031e92ef24f39b08962348
 2024-05-13 22:27:37 +02:00
Ricardo Wurmus 336e3ad957
gnu: r-imager: Update to 1.0.2. 
* gnu/packages/cran.scm (r-imager): Update to 1.0.2.

Change-Id: I678a384037c4c265d2a2b06f2b3b8013abb6d017
 2024-05-13 22:27:37 +02:00
Ricardo Wurmus 6d7d9513e3
gnu: r-farver: Update to 2.1.2. 
* gnu/packages/cran.scm (r-farver): Update to 2.1.2.

Change-Id: Ic73015b3cd86c9cbaceedf6a721db8d6fe825c6c
 2024-05-13 22:27:37 +02:00
Ricardo Wurmus ec14825484
gnu: r-options: Update to 0.2.0. 
* gnu/packages/cran.scm (r-options): Update to 0.2.0.

Change-Id: Ia011d3fb5295a58ea49396b090186beae2bab575
 2024-05-13 22:27:37 +02:00
Ricardo Wurmus c590b6f1cc
gnu: r-polspline: Update to 1.1.25. 
* gnu/packages/cran.scm (r-polspline): Update to 1.1.25.

Change-Id: I0fb7c7912036cff5fd56d577cf29a464e34a2775
 2024-05-13 22:27:37 +02:00
Ricardo Wurmus f8bf75b1c9
gnu: r-qlcmatrix: Update to 0.9.8. 
* gnu/packages/cran.scm (r-qlcmatrix): Update to 0.9.8.
[native-inputs]: Add r-knitr and r-rmarkdown.

Change-Id: I08e55b72ffacf17b41c895801d6cbdad52658e6b
 2024-05-13 22:27:37 +02:00
Ricardo Wurmus adf2088ca5
gnu: r-effectsize: Update to 0.8.8. 
* gnu/packages/cran.scm (r-effectsize): Update to 0.8.8.

Change-Id: I51270018adaf62fdbcb3e5ad73b99f618b346b9a
 2024-05-13 22:27:37 +02:00
Ricardo Wurmus 7744aaf2b0
gnu: r-insight: Update to 0.19.11. 
* gnu/packages/cran.scm (r-insight): Update to 0.19.11.

Change-Id: I3cb8ef7e28309d542cb30d993264cc79811b8d59
 2024-05-13 22:27:37 +02:00
Tomas Volf b8c0bdea4e
gnu: cgit: Update to 1.2.3-3.dbadd85. 
* gnu/packages/version-control.scm (cgit): Update to 1.2.3-3.dbadd85.

Change-Id: I41827d1d97f28be71af5532b554d6b7a5e1123cc
Signed-off-by: Christopher Baines <mail@cbaines.net>
 2024-05-13 19:31:20 +01:00
Zheng Junjie a5455ed672
gnu: fcitx5-configtool: Remove inputs label. 
* gnu/packages/fcitx5.scm (fcitx5-configtool)
[inputs]: Remove label.

Change-Id: Ib45fbf71d5f2ffbac3285e388629b6cf0ca004fe
Signed-off-by: Christopher Baines <mail@cbaines.net>
 2024-05-13 19:31:20 +01:00
Zheng Junjie 86c1f3857c
gnu: fcitx5-configtool: Enable kcm support. 
* gnu/packages/fcitx5.scm (fcitx5-configtool)
[arguments]: Remove it.
[inputs]: Add qtdeclarative, qtquickcontrols2, ki18n, kpackage, kdeclarative,
kiconthemes, kcoreaddons, plasma-framework, kwindowsystem, kirigami, libxkbcommon.

Change-Id: I43a43458232a5ad3c1d156c779359e356cbf98b8
Signed-off-by: Christopher Baines <mail@cbaines.net>
 2024-05-13 19:31:20 +01:00
Alexey Abramov 7d6d54202a
gnu: isc-dhcp: Add debianutils as an input. 
dhclient provides a hook mechanism for users.  In order to run these hooks,
dhclient-script uses run-parts to run all the executable files found in
requested directory. run-parts is part of debianutils packages.

* gnu/packages/admin.scm (isc-dhcp)[inputs]: Add "debianutils" to provide
access to run-parts.

Signed-off-by: Christopher Baines <mail@cbaines.net>
Change-Id: I2057881da57a6065d65d1de95e51ed1c8b19e15f
 2024-05-13 19:31:20 +01:00
Fabio Natali b1de64812a
gnu: notmuch: Add sfsexp input. 
sfsexp is a C/C++ library for the manipulation (read, parse, modify, and
create) of symbolic expressions.  In an environment where sfsexp is available,
Notmuch will compile with support for a S-expression-based query format.  This
commit is to add sfsexp as a Notmuch dependency and therefore to add S-exp
support.

* gnu/packages/mail.scm (notmuch)[native-inputs]: Add git-minimal/pinned.
[inputs]: Add sfsexp.

Change-Id: Ic3b4a30b2672ad690d66b283e9bdc8e2197f97a7
Signed-off-by: Christopher Baines <mail@cbaines.net>
 2024-05-13 19:31:20 +01:00