6e4da73710
gnu: Update coq to 8.7.0.
...
* gnu/packages/ocaml.scm (coq): Update to 8.7.0.
[build-system]: Use ocaml-build-system.
[inputs]: Add python-2.
[arguments]: Disable two failing tests.
2017-10-22 10:21:11 +02:00
07b4cd3a48
gnu: camlp5: install META file.
...
* gnu/packages/ocaml.scm (camlp5) [phases]: New install-meta phase.
2017-10-22 10:20:50 +02:00
3d679ab1e5
gnu: lame: Update to 3.100.
...
* gnu/packages/mp3.scm (lame): Update to 3.100.
[source]: Don't hard-code version.
2017-10-22 00:39:26 +02:00
28d0b52164
gnu: python-pyqt: Update to 5.9.
...
* gnu/packages/qt.scm (python-pyqt): Update to 5.9.
2017-10-21 22:38:55 +02:00
079e679219
gnu: python-sip: Update to 4.19.3.
...
* gnu/packages/qt.scm (python-sip): Update to 4.19.3.
2017-10-21 22:38:55 +02:00
a4194d1684
gnu: rest: Update to 0.8.1.
...
* gnu/packages/gnome.scm (rest): Update to 0.8.1.
2017-10-21 17:43:46 +02:00
4b9a65bf6e
gnu: gnome-disk-utility: Update to 3.26.1.
...
* gnu/packages/gnome.scm (gnome-disk-utility): Update to 3.26.1.
[build-system]: Use meson-build-system.
[native-inputs]: Add gtk+:bin.
2017-10-21 17:43:46 +02:00
b27991179e
gnu: perl-geo-ip: Update to 1.51.
...
* gnu/packages/networking.scm (perl-geo-ip): Update to 1.51.
2017-10-21 17:43:46 +02:00
5713bbf157
Use HTTPS for bioconductor.org.
...
* doc/guix.texi (Invoking guix import, Invoking guix refresh): Use HTTPS for
bioconductor.org URLs.
* gnu/packages/bioinformatics.scm (r-annotate, r-geneplotter, r-genefilter)
(r-deseq2, r-dexseq, r-annotationforge, r-rbgl, r-gseabase, r-category)
(r-gostats, r-shortread, r-biocgenerics, r-biocinstaller, r-biocviews)
(r-biocstyle, r-bioccheck, r-s4vectors, r-iranges, r-genomeinfodbdata)
(r-genomeinfodb, r-xvector, r-genomicranges, r-biobase, r-annotationdbi)
(r-biomart, r-biocparallel, r-biostrings, r-rsamtools, r-delayedarray)
(r-summarizedexperiment, r-genomicalignments, r-rtracklayer)
(r-genomicfeatures, r-graph, r-topgo, r-bsgenome, r-impute, r-seqpattern)
(r-seqlogo, r-motifrg, r-bamsignals, r-mutationalpatterns, r-tximport)
(r-rhdf5, r-chipseq, r-sva, r-affy, r-vsn, r-mzid, r-msnid)
(r-interactivedisplaybase, r-annotationhub)[home-page]: Likewise.
* gnu/packages/bioinformatics.scm (r-txdb-hsapiens-ucsc-hg19-knowngene)
(r-go-db, r-bsgenome-hsapiens-1000genomes-hs37d5, r-org-hs-eg-db)
(r-org-ce-eg-db, r-org-dm-eg-db, r-org-mm-eg-db)
(r-bsgenome-hsapiens-ucsc-hg19, r-bsgenome-mmusculus-ucsc-mm9)
(r-bsgenome-mmusculus-ucsc-mm10, r-txdb-mmusculus-ucsc-mm10-knowngene)
(r-bsgenome-celegans-ucsc-ce6, r-bsgenome-celegans-ucsc-ce10)
(r-bsgenome-dmelanogaster-ucsc-dm3, r-copyhelper)[source, home-page]:
Likewise.
* gnu/packages/statistics.scm (r-rcurl)[source]: Likewise.
* guix/build-system/r.scm (bioconductor-uri): Likewise.
* guix/import/cran.scm (%cran-url, bioconductor-package?)
(bioconductor-data-package?, bioconductor-experiment-package?): Likewise.
2017-10-21 17:43:40 +02:00
82bdcfe821
gnu: schismtracker: Update to 20170910.
...
* gnu/packages/music.scm (schismtracker): Update to 20170910.
2017-10-21 09:44:28 -04:00
fd75eb6cd4
gnu: Fix the hashes of mutated GitHub archives.
...
Fixes <https://bugs.gnu.org/28745 >.
* gnu/packages/audio.scm (csound): Fix hash.
* gnu/packages/engineering.scm (fritzing): Likewise.
* gnu/packages/erlang.scm (erlang): Likewise.
* gnu/packages/fonts.scm (font-google-material-design-icons): Likewise.
* gnu/packages/graphics.scm (ogre): Likewise.
* gnu/packages/java.scm (java-plexus-interpolation, antlr3): Likewise.
* gnu/packages/serialization.scm (yaml-cpp): Likewise.
* gnu/packages/version-control.scm (libgit2): Likewise.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-10-20 22:55:51 +02:00
7827032a7c
gnu: libvirt: Fix CVE-2017-1000256.
...
* gnu/packages/patches/libvirt-CVE-2017-1000256.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/virtualization.scm (libvirt)[source]: Use it.
2017-10-20 15:36:43 -04:00
48f8b07082
gnu: mysql: Update to 5.7.20.
...
* gnu/packages/databases.scm (mysql): Update to 5.7.20.
2017-10-20 15:36:42 -04:00
3890df5800
gnu: webkitgtk: Update to 2.18.1.
...
* gnu/packages/webkit.scm (webkitgtk): Update to 2.18.1.
2017-10-20 15:36:39 -04:00
a6e70e1169
gnu: youtube-dl: Update to 2017.10.20.
...
* gnu/packages/video.scm (youtube-dl): Update to 2017.10.20.
2017-10-20 19:48:34 +02:00
5a740d06b6
gnu: dovecot: Update to 2.2.33.2.
...
* gnu/packages/mail.scm (dovecot): Update to 2.2.33.2.
2017-10-20 19:48:34 +02:00
fa9ac83ec4
gnu: ola: Build with protobuf@2.
...
This follows up commit dd12d4aad0
2017-10-20 19:48:33 +02:00
77aa706ab6
gnu: font-hack: Update to 3.000.
...
* gnu/packages/fonts.scm (font-hack): Update to 3.000.
[source]: Download from new account.
[license]: Explicitly list all licences.
2017-10-20 19:48:33 +02:00
c812f46058
gnu: Add aegisub.
...
* gnu/packages/video.scm (aegisub): New variable.
2017-10-20 19:41:57 +02:00
6779ae27e6
gnu: Add ffms2.
...
* gnu/packages/video.scm (aegisub): New variable.
2017-10-20 19:41:34 +02:00
f71ce2824d
gnu: speexdsp: Fix building on aarch64-linux.
...
* gnu/packages/xiph.scm (speexdsp)[arguments]: On aarch64-linux, disable
neon optimisations.
2017-10-20 16:23:48 +03:00
6df274073a
gnu: Add emacs-json-snatcher.
...
* gnu/packages/emacs.scm (emacs-json-snatcher): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-10-20 14:41:41 +02:00
49d3d1d937
gnu: shellcheck: Update to 0.4.6.
...
* gnu/packages/haskell.scm (shellcheck): Update to 0.4.6.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-10-20 14:41:41 +02:00
3b2fa47879
gnu: dos2unix: Update to 7.4.0.
...
* gnu/packages/textutils.scm (dos2unix): Update to 7.4.0.
2017-10-20 02:16:56 +02:00
6c0c175271
gnu: cowsay: Swap ‘build’ and ‘install’ phases.
...
* gnu/packages/games.scm (cowsay)[arguments]: Invoke ‘install.sh’ during the
‘install’ phase. Delete the ‘build’ phase, as there's nothing to be built.
2017-10-20 02:16:55 +02:00
46ba5337c0
gnu: cowsay: Update to 3.04.
...
* gnu/packages/games.scm (cowsay): Update to 3.04.
[source]: Download from new location.
[home-page]: Point directly to the relevant page.
[description]: Correct mark-up and expand slightly.
2017-10-20 02:16:54 +02:00
8cccd09d3e
gnu: colordiff: Use HTTPS home page.
...
* gnu/packages/patchutils.scm (colordiff)[home-page]: Use HTTPS.
2017-10-20 02:16:54 +02:00
fc622383a7
gnu: unbound: Update to 1.6.7.
...
* gnu/packages/dns.scm (unbound): Update to 1.6.7.
2017-10-20 02:16:53 +02:00
378140e591
gnu: neofetch: Update to 3.3.0.
...
* gnu/packages/admin.scm (neofetch): Update to 3.3.0.
[arguments]: Add ‘install’ phase replacement that manually invokes make.
2017-10-20 02:16:52 +02:00
1e9433cf4d
gnu: qtox: Update to 1.12.1.
...
* gnu/packages/messaging.scm (qtox): Update to 1.12.1.
2017-10-20 02:16:52 +02:00
57473bfc51
gnu: speedtest-cli: Update to 1.0.7.
...
* gnu/packages/networking.scm (speedtest-cli): Update to 1.0.7.
2017-10-20 02:16:51 +02:00
47b85a69c0
gnu: cppcheck: Update to 1.81.
...
* gnu/packages/check.scm (cppcheck): Update to 1.81.
2017-10-20 02:16:51 +02:00
7f65202990
gnu: python-sge-pygame: Update source URL.
...
* gnu/packages/game-development.scm (python-sge-pygame)[source]: Update URL.
2017-10-19 18:01:37 -04:00
9ccce79910
gnu: musl: Update to 1.1.17.
...
* gnu/packages/musl.scm (musl): Update to 1.1.17.
[source]: Remove patch.
* gnu/packages/patches/musl-CVE-2016-8859.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-10-19 17:37:25 -04:00
9b396c0cab
vm: Always use GRUB/i386.
...
Fixes <https://bugs.gnu.org/28768 >.
Reported by Oleg Pykhalov <go.wigust@gmail.com>.
* gnu/system/vm.scm (virtualized-operating-system): Override the
'bootloader' field.
2017-10-19 23:21:49 +02:00
b11962067b
gnu: linux-libre: Update to 4.13.8.
...
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.13.8.
(%linux-libre-hash): Update hash.
2017-10-19 15:31:47 -04:00
7a402621ec
gnu: linux-libre@4.9: Update to 4.9.57.
...
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.57.
2017-10-19 15:31:02 -04:00
a7c3dfeb6c
gnu: linux-libre@4.4: Update to 4.4.93.
...
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.93.
2017-10-19 15:30:30 -04:00
a8401c4ef1
gnu: linux-libre@4.1: Update to 4.1.45.
...
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.45.
Remove patch that is now included upstream.
2017-10-19 15:29:09 -04:00
8c1db4fc58
gnu: yadifa: Update to 2.2.6.
...
* gnu/packages/dns.scm (yadifa): Update to 2.2.6.
2017-10-19 21:21:01 +02:00
43dc47fa24
gnu: Add zathura-pdf-mupdf.
...
* gnu/packages/pdf.scm (zathura-pdf-mupdf): New variable.
2017-10-19 21:21:01 +02:00
513885b54e
gnu: qemu: Build with libjpeg-turbo.
...
This gets rid of a compile warning since SPICE uses libjpeg-turbo, and reduces
the closure size by 0.8MiB.
* gnu/packages/virtualization.scm (qemu)[inputs]: Replace LIBJPEG-8 with
LIBJPEG-TURBO.
2017-10-19 21:20:56 +02:00
d1c11418e7
gnu: emacs: Fix Man default C header file search path.
...
* gnu/packages/emacs.scm (emacs): Make sure Man looks for C header files in
the right places.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-10-19 12:17:47 +02:00
b79813a19a
gnu: speex: Build and install 'speexdec' and 'speexenc'.
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* gnu/packages/xiph.scm (speex)[native-inputs]: Add 'pkg-config'.
[inputs]: Add 'speexdsp'.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-10-19 12:17:44 +02:00
4ad8fbd185
gnu: virt-manager: Fix default URI check.
...
Allows virt-manager to connect to qemu://system by default.
* gnu/packages/virtualization.scm (virt-manager)[arguments]<#:phases>: Add
'fix-default-uri.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-10-19 12:17:44 +02:00
b764a9f5e0
gnu: virt-manager: Enable statistics graphing support.
...
* gnu/packages/virtualization.scm (virt-manager)[inputs]: Add
python2-pycairo.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-10-19 12:17:44 +02:00
9a187b39b7
gnu: qemu: Add OpenGL support.
...
Enables virgl support with spice 0.13+.
* gnu/packages/virtualization.scm (qemu)[arguments]<#:configure-flags>: Add
--enable-opengl.
[inputs]: Add libdrm and libepoxy.
(qemu-minimal)[inputs]: Remove libdrm and libepoxy.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-10-19 12:17:44 +02:00
8da7f79281
gnu: virt-manager: Enable spice-gtk support.
...
* gnu/packages/virtualization.scm (virt-manager)[inputs]: Add spice-gtk.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-10-19 12:17:43 +02:00
c44dd0d676
gnu: spice-gtk: Enable GObject introspection support.
...
Allows virt-manager to use the spice-gtk widget.
* gnu/packages/spice.scm (spice-gtk)[inputs]: Add gobject-introspection.
[arguments]<#:configure-flags>: Add --enable-introspection.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-10-19 12:17:43 +02:00
b376ec57f9
gnu: qemu: Enable spice usb redirection support.
...
* gnu/packages/virtualization.scm (qemu)[arguments]<#:configure-flags>: New
argument.
[inputs]: Add usbredir.
(qemu-minimal)[arguments]<#:configure-flags>: Restrict them even when they are
set by qemu.
[inputs]: Remove usbredir.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-10-19 12:17:43 +02:00
Julien Lepiller
Marius Bakke
Tobias Geerinckx-Rice
Kei Kebreau
Maxim Cournoyer
Leo Famulari
Efraim Flashner
Oleg Pykhalov
ng0
Ludovic Courtès
Mark H Weaver
宋文武
Andy Patterson