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69861 Commits (7290477c8b541a9e9e0e34a26caa08622c5cdf18)

Author SHA1 Message Date
Tobias Geerinckx-Rice 7290477c8b
gnu: inotify-tools: Update to 3.20.11.0.
* gnu/packages/linux.scm (inotify-tools): Update to 3.20.11.0.
2020-12-01 20:55:41 +01:00
Efraim Flashner 410d5550b0
gnu: Add slurm-18.08.
* gnu/packages/parallel.scm (slurm-18.08): New variable.
2020-12-01 21:12:17 +02:00
Felix Gruber b202c702ce
gnu: libspatialite: Update to 5.0.0.
* gnu/packages/geo.scm (libspatialite, spatialite-tools): Update to 5.0.0.
[inputs]: Add new required dependencies minizip and librttopo.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2020-12-01 18:43:56 +01:00
Felix Gruber a051bf405b
gnu: Add librttopo.
* gnu/packages/geo.scm (librttopo): New variable.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2020-12-01 18:43:56 +01:00
Ricardo Wurmus ace3af2b80
gnu: pandoc-citeproc: Separate outputs.
This removes unnecessary references to Haskell packages for the statically
built executable.

* gnu/packages/haskell-xyz.scm (pandoc-citeproc)[outputs]: Add "lib" and "doc"
outputs.
2020-12-01 15:39:33 +01:00
Pierre Neidhardt c16628ea6e
gnu: Add glyphs.
* gnu/packages/lisp-xyz.scm (cl-glyphs, ecl-glyphs, sbcl-glyphs): New variables.
2020-12-01 15:15:52 +01:00
Pierre Neidhardt 1467ae640a
gnu: Add trivial-benchmark.
* gnu/packages/lisp-xyz.scm (cl-trivial-benchmark, ecl-trivial-benchmark,
sbcl-trivial-benchmark): New variables.
2020-12-01 15:07:06 +01:00
Pierre Neidhardt fc92963955
gnu: Add supertrace.
* gnu/packages/lisp-xyz.scm (cl-supertrace, ecl-supertrace, sbcl-supertrace):
New variables.
2020-12-01 13:44:08 +01:00
Pierre Neidhardt e4c1818e1b
gnu: Add repl-utilities.
* gnu/packages/lisp-xyz.scm (cl-repl-utilities, ecl-repl-utilities,
sbcl-repl-utilities): New variables.
2020-12-01 13:37:33 +01:00
Pierre Neidhardt 40693b6138
gnu: Add cl-progress-bar.
* gnu/packages/lisp-xyz.scm (cl-progress-bar, ecl-cl-progress-bar,
sbcl-cl-progress-bar): New variables.
2020-12-01 13:37:33 +01:00
Pierre Neidhardt 0b1f5713da
gnu: Add documentation-utils-extensions.
* gnu/packages/lisp-xyz.scm (cl-documentation-utils-extensions,
ecl-documentation-utils-extensions, sbcl-documentation-utils-extensions): New
variables.
2020-12-01 13:37:33 +01:00
Pierre Neidhardt 52b81c32ae
gnu: Add gtwiwtg.
* gnu/packages/lisp-xyz.scm (cl-gtwiwtg, ecl-gtwiwtg, sbcl-gtwiwtg): New variables.
2020-12-01 13:37:33 +01:00
Pierre Neidhardt 4f298ebac7
gnu: Add trivial-download.
* gnu/packages/lisp-xyz.scm (cl-trivial-download, ecl-trivial-download,
sbcl-trivial-download): New variables.
2020-12-01 13:37:33 +01:00
Ricardo Wurmus bb071237f2
gnu: ghc-libyaml: Use libyaml+static.
This is necessary to build static libraries that are used in the static build
of pandoc-citeproc.

* gnu/packages/haskell-xyz.scm (ghc-libyaml)[inputs]: Replace libyaml with
libyaml+static.
[arguments]: Adjust directory name.
2020-12-01 13:30:35 +01:00
Ricardo Wurmus 5eede29da4
gnu: Add libyaml+static.
* gnu/packages/web.scm (libyaml+static): New variable.
2020-12-01 13:30:35 +01:00
Ricardo Wurmus 555677fdf7
gnu: java-picard-1.113: Use ant/java8.
* gnu/packages/bioinformatics.scm (java-picard-1.113)[arguments]: Use
ant/java8.
[inputs]: Replace ant with ant/java8.
2020-12-01 13:30:34 +01:00
Pierre Neidhardt 65bf9f6b2d
gnu: Add clesh.
* gnu/packages/lisp-xyz.scm (cl-clesh, ecl-clesh, sbcl-clesh): New variables.
2020-12-01 12:38:47 +01:00
Pierre Neidhardt 91d59549a7
gnu: Add trivial-shell.
* gnu/packages/lisp-xyz.scm (cl-trivial-shell, ecl-trivial-shell,
sbcl-trivial-shell): New variables.
2020-12-01 12:38:47 +01:00
Pierre Neidhardt f825720743
gnu: Add clamp.
* gnu/packages/lisp-xyz.scm (cl-clamp, ecl-clamp, sbcl-clamp): New variables.
2020-12-01 12:38:47 +01:00
Pierre Neidhardt 8ee3e7833e
gnu: Add check-it.
* gnu/packages/lisp-xyz.scm (cl-check-it, ecl-check-it, sbcl-check-it): New variables.
2020-12-01 12:38:47 +01:00
Pierre Neidhardt 6ba21a2ebd
gnu: Add clawk.
* gnu/packages/lisp-xyz.scm (cl-clawk, ecl-clawk, sbcl-clawk): New variables.
2020-12-01 12:38:47 +01:00
Pierre Neidhardt d13fb04b39
gnu: Add regex.
* gnu/packages/lisp-xyz.scm (cl-regex, ecl-regex, sbcl-regex): New variables.
2020-12-01 12:38:46 +01:00
Pierre Neidhardt 8d8ecbfe37
gnu: claw-support: Fix typos in description.
* gnu/packages/lisp-xyz.scm (claw-support)[description]: Fix typos.
2020-12-01 12:37:52 +01:00
Pierre Neidhardt ab15cf5a6d
gnu: Add lisp-repl-core-dumper.
* gnu/packages/lisp.scm (lisp-repl-core-dumper): New variable.
2020-12-01 12:37:52 +01:00
Guillaume Le Vaillant 0ce02f679d
gnu: sbcl-bst: Update to 2.0-0.8545aed.
* gnu/packages/lisp-xyz.scm (sbcl-bst): Update to 2.0-0.8545aed.
2020-12-01 11:52:35 +01:00
Guillaume Le Vaillant 7a0f660609
gnu: sbcl-ironclad: Update to 0.52.
* gnu/packages/lisp-xyz.scm (sbcl-ironclad): Update to 0.52.
2020-12-01 11:52:35 +01:00
Guillaume Le Vaillant ad884c3b88
gnu: Add olc.
* gnu/packages/lisp-xyz.scm (cl-olc, ecl-olc, sbcl-olc): New variables.
2020-12-01 11:52:35 +01:00
Guillaume Le Vaillant deed016169
gnu: Add maidenhead.
* gnu/packages/lisp-xyz.scm (cl-maidenhead, ecl-maidenhead, sbcl-maidenhead):
  New variables.
2020-12-01 11:52:35 +01:00
Guillaume Le Vaillant 291328b19e
gnu: Add mgrs.
* gnu/packages/lisp-xyz.scm (cl-mgrs, ecl-mgrs, sbcl-mgrs): New variables.
2020-12-01 11:52:35 +01:00
Guillaume Le Vaillant fd994faad4
gnu: Add utm-ups.
* gnu/packages/lisp-xyz.scm (cl-utm-ups, ecl-utm-ups, sbcl-utm-ups): New
  variables.
2020-12-01 11:52:35 +01:00
Guillaume Le Vaillant 81108a983a
gnu: sbcl-simple-parallel-tasks: Update to 1.0-1.ce7b60f.
* gnu/packages/lisp-xyz.scm (sbcl-simple-parallel-tasks): Update to
  1.0-1.ce7b60f.
2020-12-01 11:52:34 +01:00
Guillaume Le Vaillant 26e92b7e78
gnu: sbcl-specialized-function: Disable tests.
* gnu/packages/lisp-xyz.scm (sbcl-specialized-function)[arguments]: Disable
  tests.
2020-12-01 11:52:34 +01:00
Guillaume Le Vaillant 718dd9779a
gnu: clisp: Remove unused patch.
This is a follow-up for 074236d197.

* gnu/patches/clisp-remove-failing-test.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2020-12-01 11:52:34 +01:00
Guillaume Le Vaillant 0809e4a4fa
gnu: Add clml.
* gnu/packages/lisp-xyz.scm (cl-clml, sbcl-clml): New variables.
* gnu/packages/patches/sbcl-clml-fix-types.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2020-12-01 11:52:34 +01:00
Guillaume Le Vaillant c3e459d266
gnu: sbcl: Increase default maximum heap size.
* gnu/packages/lisp.scm (sbcl)[arguments]: Build with a max heap size
  of 3 GiB.
2020-12-01 11:52:34 +01:00
Guillaume Le Vaillant dec194bfa8
gnu: Add array-operations.
* gnu/packages/lisp-xyz.scm (cl-array-operations, ecl-array-operations,
  sbcl-array-operations): New variables.
2020-12-01 11:52:34 +01:00
zimoun 86971616c1
upgrade: Allow several regexps.
Fixes <https://bugs.gnu.org/44928>.
Reported by Luis Felipe <luis.felipe.la@protonmail.com>.

* guix/scripts/upgrade.scm (guix-upgrade): Allow several regexps and remove
"extraneous arguement" check.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-12-01 11:34:10 +01:00
Morgan Smith dcb95c6fc1
gnu: openocd: Fix build.
* gnu/packages/embedded.scm (openocd)[arguments]: Add "LIBS=-lutil" to allow
it to build.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-12-01 11:08:57 +01:00
Nicolas Goaziou 2c0b331c9a
news: Fix typo.
* etc/news.scm (version): Add missing @option macro in French translation.
2020-12-01 09:36:44 +01:00
Mathieu Othacehe 98bf5ffe2d
Revert "ci: Temporarily disable image-jobs."
This reverts commit a79041f0b5. The issue has
been fixed with 07a33b1d21.
2020-12-01 09:33:16 +01:00
Ryan Prior 50b18b5c10
gnu: emacs-next-pgtk: Update to savannah feature/pgtk branch.
* gnu/packages/emacs.scm (emacs-next-pgtk): Update to savannah feature/pgtk branch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-12-01 00:10:48 +01:00
Kyle Meyer 07303b2d5b
gnu: git-annex: Update to 8.20201127.
* gnu/packages/haskell-apps.scm (git-annex): Update to 8.20201127.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-12-01 00:10:48 +01:00
Ludovic Courtès 07a33b1d21
services: profile: Create manifest at monadic-bind time.
Fixes <https://bugs.gnu.org/44952>.
Reported by Mathieu Othacehe <othacehe@gnu.org>.

* gnu/services.scm (packages->profile-entry): Change 'with-monad' to
'mlet' with one binding.
2020-12-01 00:10:48 +01:00
Ludovic Courtès 56fc14577e
daemon: Remove unneeded forward declaration.
This is a followup to ee9dff34f9.

* nix/libstore/build.cc: Remove 'struct Agent' forward declaration.
2020-12-01 00:10:48 +01:00
Nicolas Goaziou 807e9dc1a7
gnu: emacs-relint: Update to 1.19.
* gnu/packages/emacs-xyz.scm (emacs-relint): Update to 1.19.
2020-11-30 23:34:27 +01:00
Nicolas Goaziou 4557572901
gnu: emacs-xr: Update to 1.20.
* gnu/packages/emacs-xyz.scm (emacs-xr): Update to 1.20.
2020-11-30 23:34:15 +01:00
Ricardo Wurmus 80fbad4fe6
gnu: pigx-chipseq: Update to 0.0.51.
* gnu/packages/bioinformatics.scm (pigx-chipseq): Update to 0.0.51.
[inputs]: Add r-corrplot, r-deseq2, r-dt, r-ggrepel, r-gprofiler2, r-pheatmap,
and r-rsubread.
2020-11-30 22:39:34 +01:00
Ricardo Wurmus d3c1b5f66d
gnu: pigx-scrnaseq: Update to 1.1.7.
* gnu/packages/bioinformatics.scm (pigx-scrnaseq): Update to 1.1.7.
2020-11-30 22:39:34 +01:00
Efraim Flashner 05be4e06a3
gnu: alot: Don't use unstable tarball.
* gnu/packages/mail.scm (alot)[source]: Download using git-fetch.
2020-11-30 23:33:55 +02:00
Danny Milosavljevic ad01213837
gnu: Add fiano-fmap.
* gnu/packages/admin.scm (fiano-fmap): New variable.
2020-11-30 22:31:38 +01:00