2b39d85ac4
gnu: liblantern: Update to 0.8.1.
...
* gnu/packages/machine-learning.scm (liblantern): Update to 0.8.1.
2022-09-20 17:02:09 +02:00
7531efe54d
gnu: liblantern: Do not hardcode Python version.
...
* gnu/packages/machine-learning.scm (liblantern)[arguments]: Do not hardcode
Python version.
2022-09-20 17:02:09 +02:00
883d4e0abf
gnu: python-scikit-learn: Update to 1.1.2.
...
* gnu/packages/machine-learning.scm (python-scikit-learn): Update to 1.1.2.
2022-09-14 21:08:34 +02:00
5a9c2abf9e
gnu: Remove ‘open source’ from package descriptions.
...
Also do some (trivial) editing where appropriate.
* gnu/packages/bioconductor.scm (r-anaquin, r-rcppnumerical)
[description]: Remove superfluous ‘open source’.
* gnu/packages/debian.scm (apt-mirror)[description]: Likewise.
Add @acronym{}. Drop obscure Ubuntu for famous Trisquel. Reorder.
* gnu/packages/documentation.scm (scrollkeeper)[description]:
Remove superfluous ‘open systems’. Keep ‘Open Source’ in standard name.
* gnu/packages/engineering.scm (freecad, cura-engine)[description]:
Remove superfluous ‘open source’ and excessive puffery.
* gnu/packages/firmware.scm (make-opensbi-package)
[synopsis]: Remove ‘Open Source’. Use @acronym{}.
[description]: Fix first sentence to follow guidelines. Use @acronym{}.
* gnu/packages/game-development.scm (ioquake3, recastnavigation):
[description]: Remove ‘open source’.
* gnu/packages/graphics.scm (skia)[description]: Likewise.
* gnu/packages/lisp-xyz.scm (sbcl-s-sysdeps)[description]: Likewise.
* gnu/packages/machine-learning.scm (onnx)[description]: Likewise.
Use @acronym{}.
* gnu/packages/ocaml.scm (ocaml-cudf)[description]: Likewise.
2022-08-14 02:00:00 +02:00
9b1a2dcd5b
gnu: python-umap-learn: Disable unreliable test.
...
* gnu/packages/machine-learning.scm (python-umap-learn)[arguments]: Disable
test_densmap_trustworthiness_on_iris_supervised.
2022-08-01 12:46:19 +02:00
a69f2cd076
gnu: python-umap-learn: Set NUMBA_CACHE_DIR.
...
* gnu/packages/machine-learning.scm (python-umap-learn)[arguments]: Add phase
to set NUMBA_CACHE_DIR.
2022-08-01 12:46:19 +02:00
6416e77280
gnu: Add python-pyro-ppl.
...
* gnu/packages/machine-learning.scm (python-pyro-ppl): New variable.
2022-07-09 10:21:21 +02:00
ff37afb288
gnu: Add python-visdom.
...
* gnu/packages/machine-learning.scm (python-visdom): New variable.
2022-07-09 10:21:21 +02:00
2cf138db76
gnu: Add python-lap.
...
* gnu/packages/machine-learning.scm (python-lap): New variable.
2022-07-09 10:21:21 +02:00
bafa7a00a1
gnu: Add python-pyro-api.
...
* gnu/packages/machine-learning.scm (python-pyro-api): New variable.
2022-07-08 18:41:35 +02:00
c6136b48c2
gnu: Add python-torchfile.
...
* gnu/packages/machine-learning.scm (python-torchfile): New variable.
2022-07-08 18:41:35 +02:00
ba86c7604d
gnu: python-torchvision: Update to 0.13.0.
...
* gnu/packages/machine-learning.scm (python-torchvision): Update to 0.13.0.
2022-07-07 14:02:33 +02:00
deae5d0df1
gnu: python-pytorch: Update to 1.12.0.
...
* gnu/packages/machine-learning.scm (python-pytorch): Update to 1.12.0.
[arguments]: Explicitly request the use of our pybind11 package.
2022-07-07 14:02:33 +02:00
87b43ab562
gnu: xnnpack: Update to 0.0-2.ae108ef.
...
* gnu/packages/machine-learning.scm (xnnpack): Update to 0.0-2.ae108ef.
* gnu/packages/patches/xnnpack-system-libraries.patch: Update.
2022-07-07 14:02:33 +02:00
c929619b36
gnu: python-pytorch-for-r-torch: Explicitly keep at 1.11.0.
...
* gnu/packages/machine-learning.scm (python-pytorch-for-r-torch): Separate
from python-pytorch by overriding version and source.
2022-07-07 14:02:33 +02:00
563bb6eab1
gnu: Add python-torchvision.
...
* gnu/packages/machine-learning.scm (python-torchvision): New variable.
2022-07-06 17:16:15 +02:00
43cf8861b8
gnu: liblantern: Update to 0.8.0.
...
* gnu/packages/machine-learning.scm (liblantern): Update to 0.8.0.
2022-07-05 16:56:05 +02:00
20f55375dc
gnu: python-pytorch: Update to 1.11.0.
...
* gnu/packages/machine-learning.scm (python-pytorch): Update to 1.11.0.
[source](snippet): Remove now unnecessary "caffe2/onnx/backend.cc"
substitution.
[arguments]: Add 'remove-caffe2-onnx-scripts' phase.
* gnu/packages/patches/python-pytorch-runpath.patch,
gnu/packages/patches/python-pytorch-system-libraries.patch: Update.
2022-07-05 16:56:04 +02:00
b211824f0a
gnu: onnx: Update to 1.12.0.
...
* gnu/packages/machine-learning.scm (onnx): Update to 1.12.0.
2022-07-05 16:56:04 +02:00
64c043e63a
Merge remote-tracking branch 'origin/master' into staging
2022-06-01 12:42:04 +03:00
9a550ba8c9
gnu: Remove python2-autograd.
...
* gnu/packages/machine-learning.scm (python2-autograd): Delete variable.
2022-05-31 14:52:31 -04:00
0837d0aaf1
gnu: Remove python2-fastlmm.
...
* gnu/packages/machine-learning.scm (python2-fastlmm): Delete variable.
2022-05-31 14:52:25 -04:00
1c865e8e1c
gnu: Remove python2-scikit-learn.
...
* gnu/packages/machine-learning.scm (python2-scikit-learn): Delete variable.
(python-scikit-learn)[properties]: Remove the python2-variant property.
2022-05-31 14:52:24 -04:00
e5e0e283ff
Merge branch 'master' into staging
2022-05-16 11:14:42 +03:00
7c204281ff
gnu: openfst: Update to 1.8.2, enable ngram extension
...
This extension is required by some programs that depend on openfst that aren't
yet packaged.
* gnu/packages/machine-learning.scm (openfst): Update to 1.8.2.
[arguments]: New field.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-15 22:49:50 +02:00
d60b9f8d0f
gnu: openfst-1.7.3: Enable ngram-fst extension & C++14 build
...
The extension doesn't build in old versions of openfst such as 1.7.3 without
manually setting CXXFLAGS.
This package definition, including this workaround to build extensions
successfully, will need to be removed once kaldi is fixed upstream and can be
used with up-to-date versions of openfst.
* gnu/packages/machine-learning.scm (openfst-1.7.3)[arguments]: New field.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-15 22:49:50 +02:00
d57a2c2b33
gnu: kaldi: Update to dd107fd, bypass tests
...
Either kaldi's tests are broken or openblas has reintroduced a bug:
- https://github.com/kaldi-asr/kaldi/pull/4421
More testing & fixes required upstream to re-enable the tests later. For now
they'll just have to be ignored.
* gnu/packages/machine-learning.scm (kaldi): Update to dd107fd.
[arguments]: In 'configure' phase, modify "matrix/Makefile".
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-15 22:49:50 +02:00
8c7e4a9698
gnu: openfst: Add 1.7.3 for kaldi
...
Kaldi is currently broken with openfst versions newer than 1.7.3 as it changed
some of its function signatures.
Once Kaldi is patched/fixed, this should be removed.
Reference Issues:
- https://github.com/kaldi-asr/kaldi/issues/4131
- https://github.com/kaldi-asr/kaldi/issues/4393
* gnu/packages/machine-learning.scm (openfst-1.7.3): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-15 22:49:50 +02:00
34106c85d8
gnu: python-umap-learn: Update to 0.5.3.
...
* gnu/packages/machine-learning.scm (python-umap-learn): Update to 0.5.3.
[source]: Use git.
[arguments]: New field.
[native-inputs]: Delete python-joblib and python-nose. Add python-pytest.
[propagated-inputs]: Add python-pynndescent and python-tqdm.
[synopsis]: Fix indentation.
[description]: Fix typo and re-indent.
2022-05-12 12:45:55 -04:00
06b0512260
gnu: python-pynndescent: Update to 0.5.6.
...
* gnu/packages/machine-learning.scm (python-pynndescent): Update to 0.5.6.
[phases]{check}: Skip the test_weighted_minkowski test.
[native-inputs, propagated-inputs]: Re-indent.
2022-05-12 12:45:55 -04:00
1d1f44b709
gnu: python-scikit-learn: Parallelize build and test suite.
...
* gnu/packages/machine-learning.scm (python-scikit-learn)
[phases]{configure}: New phase.
{build-ext}: Add '-j' option.
{check}: Add '-n' option.
[native-inputs]: Add python-pytest-xdist.
2022-05-12 12:45:55 -04:00
53a8e8fd6c
gnu: python-hmmlearn: Remove cythonized file.
...
* gnu/packages/machine-learning.scm (python-hmmlearn)[source]: Add
snippet to remove cythonized file.
2022-04-15 02:11:03 +03:00
e378e7a855
gnu: liblantern: Update to 0.7.2.
...
* gnu/packages/machine-learning.scm (liblantern): Update to 0.7.2.
2022-03-15 22:14:39 +01:00
95f9c44362
gnu: liblantern: Update to 0.7.0.
...
* gnu/packages/machine-learning.scm (liblantern): Update to 0.7.0.
2022-03-15 20:18:42 +01:00
d7636c8bb7
gnu: python-pytorch-for-r-torch: Reuse python-pytorch.
...
* gnu/packages/machine-learning.scm (python-pytorch-for-r-torch): Use
definition on python-pytorch, thereby updating to 1.10.2.
2022-03-15 20:18:42 +01:00
7146e553b9
gnu: Add liblantern.
...
* gnu/packages/machine-learning.scm (liblantern): New variable.
2022-02-11 15:44:42 +01:00
7b676317b3
gnu: Add python-pytorch-for-r-torch.
...
* gnu/packages/patches/python-pytorch-1.9.0-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/machine-learning.scm (python-pytorch-for-r-torch): New variable.
2022-02-11 15:44:42 +01:00
8b787eb929
gnu: python-pytorch: Update to 1.10.2.
...
* gnu/packages/machine-learning.scm (python-pytorch): Update to 1.10.2.
2022-02-11 15:44:42 +01:00
c30fa177f3
gnu: xgboost: Update to 1.5.2.
...
* gnu/packages/machine-learning.scm (xgboost, python-xgboost): Update to
1.5.2.
(python-xgboost)[arguments]: Enable previously failing test.
* gnu/packages/patches/xgboost-use-system-dmlc-core.patch: Update patch.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-01-24 12:15:29 +01:00
af36848fb3
gnu: python-scikit-learn: Update to 1.0.2.
...
* gnu/packages/machine-learning.scm (python-scikit-learn): Update to 1.0.2.
2022-01-19 21:41:13 +01:00
276f40fdc3
Merge branch 'version-1.4.0'
...
With resolved conflicts in:
gnu/packages/gnome.scm
gnu/packages/openstack.scm
gnu/packages/python-xyz.scm
2022-01-17 11:47:09 -05:00
18e872b805
gnu: python-scikit-learn: Remove obsolete phase.
...
* gnu/packages/machine-learning.scm (python-scikit-learn)[arguments]
<#:phases>: Remove 'make-files-writable phase.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2022-01-10 11:44:49 -05:00
2522ea38a3
gnu: python-opentsne: Update to 0.6.1.
...
* gnu/packages/machine-learning.scm (python-opentsne): Update to 0.6.1.
[source]<file-name>: Use git-file-name.
[arguments]<#:phases>: Don't return #t. Add 'skip-test phase after 'unpack to
skip a failing test.
2022-01-14 21:29:59 +01:00
0848b5595c
gnu: python-pynndescent: Update to 0.5.5.
...
* gnu/packages/machine-learning.scm (python-pynndescent): Update to 0.5.5.
[arguments]<#:phases>: Override 'check phase.
[native-inputs]: Remove python-nose. Add python-pytest.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-01-14 21:29:58 +01:00
c7ef428a18
gnu: python-scikit-rebate: Update to 0.62.
...
* gnu/packages/machine-learning.scm (python-scikit-rebate): Update to 0.62.
[arguments]: Disable tests.
[native-inputs]: Remove.
2022-01-11 18:36:39 +01:00
06b51c68de
gnu: Add guile-aiscm-next.
...
* gnu/packages/machine-learning.scm (guile-aiscm-next): New variable.
2021-12-28 19:05:32 +01:00
f44305bc13
gnu: guile-aiscm: Remove opencv and tensorflow.
...
* gnu/packages/machine-learning.scm (guile-aiscm)[inputs]: Remove opencv and
tensorflow.
2021-12-28 19:05:32 +01:00
50bd2b331c
gnu: guile-aiscm: Remove timestamp from documentation.
...
* gnu/packages/machine-learning.scm (guile-aiscm)[arguments]: Add phase
'build-reproducibly.
2021-12-28 19:05:32 +01:00
9e644d979d
gnu: tensorflow: Install C headers.
...
* gnu/packages/machine-learning.scm (tensorflow)[arguments]: Add build phase
'patch-cmake-file-to-install-c-headers; move setting of LDFLAGS from
'build-pip-package to 'unpack-third-party-sources; move 'build-pip-package
after 'install phase.
[source]: Add patch.
* gnu/packages/patches/tensorflow-c-api-fix.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-12-28 19:05:32 +01:00
f9d3f74ad2
gnu: Add guile-aiscm.
...
* gnu/packages/machine-learning.scm (guile-aiscm): New variable.
2021-12-27 13:21:05 +01:00
Ricardo Wurmus
Marius Bakke
Tobias Geerinckx-Rice
Ludovic Courtès
Efraim Flashner
Maxim Cournoyer
Aurora
Vinicius Monego
Sarah Morgensen