Ricardo Wurmus
|
8efb842f11
|
gnu: r-cghbase: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.44.0.
|
2019-05-06 00:14:46 +02:00 |
|
Ricardo Wurmus
|
bcb95b7aac
|
gnu: r-marray: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-marray): Update to 1.62.0.
|
2019-05-06 00:14:46 +02:00 |
|
Ricardo Wurmus
|
a61bcb28f7
|
gnu: r-graph: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-graph): Update to 1.62.0.
|
2019-05-06 00:14:46 +02:00 |
|
Ricardo Wurmus
|
588b63c2af
|
gnu: r-multtest: Update to 2.40.0.
* gnu/packages/bioconductor.scm (r-multtest): Update to 2.40.0.
|
2019-05-06 00:14:45 +02:00 |
|
Ricardo Wurmus
|
0968a44874
|
gnu: r-ripseeker: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-ripseeker): Update to 1.24.0.
|
2019-05-06 00:14:45 +02:00 |
|
Ricardo Wurmus
|
4c221b3bbf
|
gnu: r-diffbind: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 2.12.0.
[propagated-inputs]: Add r-rhtslib; remove r-zlibbioc.
|
2019-05-06 00:14:45 +02:00 |
|
Ricardo Wurmus
|
e02162f7ba
|
gnu: r-qvalue: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-qvalue): Update to 2.16.0.
|
2019-05-06 00:14:45 +02:00 |
|
Ricardo Wurmus
|
3e1bc88c1f
|
gnu: r-geneplotter: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-geneplotter): Update to 1.62.0.
|
2019-05-06 00:14:45 +02:00 |
|
Ricardo Wurmus
|
4b53d55e98
|
gnu: r-regioner: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.16.0.
|
2019-05-06 00:14:45 +02:00 |
|
Ricardo Wurmus
|
43a23a0733
|
gnu: r-hpar: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-hpar): Update to 1.26.0.
|
2019-05-06 00:14:44 +02:00 |
|
Ricardo Wurmus
|
0c53332a27
|
gnu: r-annotate: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-annotate): Update to 1.62.0.
|
2019-05-06 00:14:44 +02:00 |
|
Ricardo Wurmus
|
81a1c45df5
|
gnu: r-biocgenerics: Update to 0.30.0.
* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.30.0.
|
2019-05-06 00:14:44 +02:00 |
|
Ricardo Wurmus
|
3addf736d5
|
gnu: r-systempiper: Update to 1.18.0.
* gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.18.0.
[propagated-inputs]: Replace r-batchjobs with r-batchtools; add r-yaml.
|
2019-05-06 00:14:44 +02:00 |
|
Ricardo Wurmus
|
9bcbca135b
|
gnu: r-rsamtools: Update to 2.0.0.
* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 2.0.0.
[propagated-inputs]: Add r-rhtslib.
|
2019-05-06 00:14:44 +02:00 |
|
Ricardo Wurmus
|
82d9340b0c
|
gnu: r-impute: Update to 1.58.0.
* gnu/packages/bioinformatics.scm (r-impute): Update to 1.58.0.
[inputs]: Move gfortran from here...
[native-inputs]: ...to here.
|
2019-05-06 00:14:44 +02:00 |
|
Ricardo Wurmus
|
2b4ac1d77e
|
gnu: r-rcas: Update to 1.10.0.
* gnu/packages/bioinformatics.scm (r-rcas): Update to 1.10.0.
[propagated-inputs]: Add ghc-pandoc.
|
2019-05-06 00:14:43 +02:00 |
|
Ricardo Wurmus
|
8322c860f9
|
gnu: r-methylkit: Update to 1.10.0.
* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.10.0.
[propagated-inputs]: Add r-mgcv.
|
2019-05-06 00:14:43 +02:00 |
|
Ricardo Wurmus
|
b173dbe617
|
gnu: r-annotationhub: Update to 2.16.0.
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.16.0.
[propagated-inputs]: Add r-biocfilecache, r-dplyr, and r-rappdirs.
|
2019-05-06 00:14:43 +02:00 |
|
Ricardo Wurmus
|
a8abc8dd3a
|
gnu: r-fastseg: Update to 1.30.0.
* gnu/packages/bioinformatics.scm (r-fastseg): Update to 1.30.0.
|
2019-05-06 00:14:43 +02:00 |
|
Ricardo Wurmus
|
e699e8e599
|
gnu: r-keggrest: Update to 1.24.0.
* gnu/packages/bioinformatics.scm (r-keggrest): Update to 1.24.0.
|
2019-05-06 00:14:43 +02:00 |
|
Ricardo Wurmus
|
c798455d87
|
gnu: r-gage: Update to 2.34.0.
* gnu/packages/bioinformatics.scm (r-gage): Update to 2.34.0.
|
2019-05-06 00:14:43 +02:00 |
|
Ricardo Wurmus
|
d4ef1d59cc
|
gnu: r-genomicfiles: Update to 1.20.0.
* gnu/packages/bioinformatics.scm (r-genomicfiles): Update to 1.20.0.
|
2019-05-06 00:14:43 +02:00 |
|
Ricardo Wurmus
|
70a3e4499d
|
gnu: r-complexheatmap: Update to 2.0.0.
* gnu/packages/bioinformatics.scm (r-complexheatmap): Update to 2.0.0.
[propagated-inputs]: Add r-clue and r-png.
|
2019-05-06 00:14:43 +02:00 |
|
Ricardo Wurmus
|
e2cb23404c
|
gnu: r-dirichletmultinomial: Update to 1.26.0.
* gnu/packages/bioinformatics.scm (r-dirichletmultinomial): Update to 1.26.0.
|
2019-05-06 00:14:42 +02:00 |
|
Ricardo Wurmus
|
0af6efa3c5
|
gnu: r-ensembldb: Update to 2.8.0.
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.8.0.
|
2019-05-06 00:14:42 +02:00 |
|
Ricardo Wurmus
|
96f98c5b72
|
gnu: r-organismdbi: Update to 1.26.0.
* gnu/packages/bioinformatics.scm (r-organismdbi): Update to 1.26.0.
|
2019-05-06 00:14:42 +02:00 |
|
Ricardo Wurmus
|
a98c3b4ae4
|
gnu: r-biovizbase: Update to 1.32.0.
* gnu/packages/bioinformatics.scm (r-biovizbase): Update to 1.32.0.
|
2019-05-06 00:14:42 +02:00 |
|
Ricardo Wurmus
|
d38fbacad1
|
gnu: r-ggbio: Update to 1.32.0.
* gnu/packages/bioinformatics.scm (r-ggbio): Update to 1.32.0.
|
2019-05-06 00:14:42 +02:00 |
|
Ricardo Wurmus
|
623be1a443
|
gnu: r-gqtlbase: Update to 1.16.0.
* gnu/packages/bioinformatics.scm (r-gqtlbase): Update to 1.16.0.
|
2019-05-06 00:14:42 +02:00 |
|
Ricardo Wurmus
|
ed7de45655
|
gnu: r-snpstats: Update to 1.34.0.
* gnu/packages/bioinformatics.scm (r-snpstats): Update to 1.34.0.
|
2019-05-06 00:14:42 +02:00 |
|
Ricardo Wurmus
|
3c5f5b4154
|
gnu: r-erma: Update to 1.0.0.
* gnu/packages/bioinformatics.scm (r-erma): Update to 1.0.0.
|
2019-05-06 00:14:41 +02:00 |
|
Ricardo Wurmus
|
89ba9a7226
|
gnu: r-ldblock: Update to 1.14.0.
* gnu/packages/bioinformatics.scm (r-ldblock): Update to 1.14.0.
|
2019-05-06 00:14:41 +02:00 |
|
Ricardo Wurmus
|
a349d57a46
|
gnu: r-gqtlstats: Update to 1.16.0.
* gnu/packages/bioinformatics.scm (r-gqtlstats): Update to 1.16.0.
|
2019-05-06 00:14:41 +02:00 |
|
Ricardo Wurmus
|
105d9e2cb4
|
gnu: r-gviz: Update to 1.28.0.
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.28.0.
|
2019-05-06 00:14:41 +02:00 |
|
Ricardo Wurmus
|
1b454f9f69
|
gnu: r-gwascat: Update to 2.16.0.
* gnu/packages/bioinformatics.scm (r-gwascat): Update to 2.16.0.
[propagated-inputs]: Remove r-annotationhub, r-ggbio, r-ggplot2, r-gqtlstats,
r-graph, r-gviz, r-snpstats, r-summarizedexperiment, and r-variantannotation.
|
2019-05-06 00:14:41 +02:00 |
|
Ricardo Wurmus
|
256609eb46
|
gnu: r-sushi: Update to 1.22.0.
* gnu/packages/bioinformatics.scm (r-sushi): Update to 1.22.0.
|
2019-05-06 00:14:41 +02:00 |
|
Ricardo Wurmus
|
7705165882
|
gnu: r-fithic: Update to 1.10.0.
* gnu/packages/bioinformatics.scm (r-fithic): Update to 1.10.0.
|
2019-05-06 00:14:40 +02:00 |
|
Ricardo Wurmus
|
e998a26e1d
|
gnu: r-hitc: Update to 1.28.0.
* gnu/packages/bioinformatics.scm (r-hitc): Update to 1.28.0.
|
2019-05-06 00:14:40 +02:00 |
|
Ricardo Wurmus
|
65925573be
|
gnu: r-hdf5array: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.12.0.
[inputs]: Add zlib.
[propagated-inputs]: Add r-rhdf5lib.
|
2019-05-06 00:14:40 +02:00 |
|
Ricardo Wurmus
|
d5625b3a9e
|
gnu: r-rhdf5lib: Update to 1.6.0.
* gnu/packages/bioinformatics.scm (r-rhdf5lib): Update to 1.6.0.
|
2019-05-06 00:14:40 +02:00 |
|
Ricardo Wurmus
|
583b4fd6e3
|
gnu: r-beachmat: Update to 2.0.0.
* gnu/packages/bioinformatics.scm (r-beachmat): Update to 2.0.0.
[inputs]: Remove hdf5 and zlib.
[propagated-inputs]: Rmeove r-hdf5array, r-rcpp, r-rhdf5, and r-rhdf5lib.
|
2019-05-06 00:14:40 +02:00 |
|
Ricardo Wurmus
|
029cefdd90
|
gnu: r-singlecellexperiment: Update to 1.6.0.
* gnu/packages/bioinformatics.scm (r-singlecellexperiment): Update to 1.6.0.
|
2019-05-06 00:14:40 +02:00 |
|
Ricardo Wurmus
|
70d04dc183
|
gnu: r-scater: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.12.0.
[propagated-inputs]: Add r-biocneighbors and r-biocsingular; remove r-plyr,
r-reshape2, and r-rhdf5lib.
|
2019-05-06 00:14:40 +02:00 |
|
Ricardo Wurmus
|
4540727a21
|
gnu: r-scran: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-scran): Update to 1.12.0.
[propagated-inputs]: Add r-bh, r-biocsingular, and r-dqrng; remove r-rhdf5lib.
|
2019-05-06 00:14:39 +02:00 |
|
Ricardo Wurmus
|
f2a63d1588
|
gnu: r-delayedmatrixstats: Update to 1.6.0.
* gnu/packages/bioinformatics.scm (r-delayedmatrixstats): Update to 1.6.0.
|
2019-05-06 00:14:39 +02:00 |
|
Ricardo Wurmus
|
fbf3494972
|
gnu: Add r-biocfilecache.
* gnu/packages/bioconductor.scm (r-biocfilecache): New variable.
|
2019-05-06 00:14:39 +02:00 |
|
Ricardo Wurmus
|
fab5f7c8d9
|
gnu: r-interactivedisplaybase: Update to 1.22.0.
* gnu/packages/bioinformatics.scm (r-interactivedisplaybase): Update to 1.22.0.
|
2019-05-06 00:14:39 +02:00 |
|
Ricardo Wurmus
|
975b72fa10
|
gnu: r-edaseq: Update to 2.18.0.
* gnu/packages/bioinformatics.scm (r-edaseq): Update to 2.18.0.
|
2019-05-06 00:14:39 +02:00 |
|
Ricardo Wurmus
|
b765fc4a4c
|
gnu: r-deseq: Update to 1.36.0.
* gnu/packages/bioinformatics.scm (r-deseq): Update to 1.36.0.
|
2019-05-06 00:14:39 +02:00 |
|
Ricardo Wurmus
|
95f3a46630
|
gnu: r-aroma-light: Update to 3.14.0.
* gnu/packages/bioinformatics.scm (r-aroma-light): Update to 3.14.0.
|
2019-05-06 00:14:39 +02:00 |