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52603 Commits (787766ed1e7f0806a98e696830542da528f957bb)

Author SHA1 Message Date
Brett Gilio 7ae8c34b62
gnu: Add copyright header. 
* gnu/packages/lisp-xyz.scm: Add copyright header for Brett Gilio
  <brettg@gnu.org>.
 2019-12-21 19:03:04 -06:00
Brett Gilio 630a4b77d6
gnu: sbcl-cl-store: Use HTTPS home page URI. 
* gnu/packages/lisp-xyz.scm (sbcl-cl-store)[home-page]: Use HTTPS URI.
 2019-12-21 19:01:23 -06:00
Brett Gilio 1896256d02
gnu: sbcl-cl-store: Update to 0.8.11-1. 
* gnu/packages/lisp-xyz.scm (sbcl-cl-store): Update to 0.8.11-1.

Fixes failing build against most recent SBCL.
 2019-12-21 19:00:38 -06:00
Mădălin Ionel Patrașcu 345488d76f
gnu: fastx-toolkit: Build with GCC 6 
* gnu/packages/bioinformatics.scm (fastx-toolkit)[native-inputs]: Add gcc-6.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-12-21 23:55:25 +01:00
Mădălin Ionel Patrașcu f9488b7043
gnu: libgtextutils: Build with GCC 5 
* gnu/packages/textutils.scm (libgtextutils)[native-inputs]: Add gcc-5.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-12-21 23:55:25 +01:00
Ludovic Courtès 6ee87461e0
services: Add Mumi service. 
* gnu/services/web.scm (%mumi-activation, %mumi-accounts): New variables.
(mumi-shepherd-services): New procedure.
(mumi-service-type): New variable.
* doc/guix.texi (Web Services): Document it.
 2019-12-21 23:55:25 +01:00
Ludovic Courtès c48c6152a8
gnu: mumi: Add dependency on GnuTLS. 
* gnu/packages/mail.scm (mumi)[inputs]: Add GNUTLS.
 2019-12-21 23:55:25 +01:00
Ludovic Courtès ec73e50bad
gnu: mumi: Install assets. 
* gnu/packages/mail.scm (mumi)[source](snippet): Modify "Makefile.am" so
that assets are installed.
 2019-12-21 23:55:25 +01:00
Ludovic Courtès 8ff573d3a0
gnu: mumi: Pass "--localstatedir=/var". 
* gnu/packages/mail.scm (mumi)[arguments]: Add #:configure-flags.
 2019-12-21 23:55:24 +01:00
Ludovic Courtès c7b2b53980
gnu: mumi: Add dependency on mumimu. 
The package definition of mumi was taken from the 'guix.scm' file in mumi.

* gnu/packages/mail.scm (mumimu): New variable.
(mumi)[inputs]: Add it.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2019-12-21 23:55:24 +01:00
Ludovic Courtès 18e4d11bdf
gnu: mumi: Install .go files in the right place. 
* gnu/packages/mail.scm (mumi)[source](modules, snippet): New fields.
 2019-12-21 23:55:24 +01:00
Ludovic Courtès 1214684bbd
gnu: mumi: Do not hard-code "2.2". 
* gnu/packages/mail.scm (mumi)[arguments]: Add #:modules and
 #:imported-modules.  In 'wrap-executable' phase, use
'target-guile-effective-version' instead of hard-coding "2.2".
 2019-12-21 23:55:24 +01:00
Ludovic Courtès 89bbcc80d7
guix system: Honor the build options in 'delete-generations'. 
Until now, 'guix system delete-generations' would ignore OPTS; for
example, it would not enable #:print-extended-build-trace? & co.,
leading to suboptimal output.

* guix/scripts/system.scm (process-command)[with-store*]: New macro.
Use it for 'delete-generations', 'switch-generation', and 'roll-back'.
 2019-12-21 23:55:24 +01:00
Arun Isaac 223cb7c6ef
gnu: guile-email: Update to 0.2.2. 
* gnu/packages/guile-xyz.scm (guile-email): Update to 0.2.2.
 2019-12-22 01:03:13 +05:30
Hartmut Goebel 4207da9e2c
gnu: Add purpose. 
* gnu/packages/kde-frameworks.scm(purpose): New variable.
 2019-12-21 20:07:51 +01:00
Mark H Weaver c109d3268b
gnu: linux-libre: Update to 5.4.6. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.6.
(linux-libre-5.4-pristine-source): Update hash.
 2019-12-21 07:18:54 -05:00
Mark H Weaver 3dc100db9c
gnu: linux-libre@4.19: Update to 4.19.91. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.91.
(linux-libre-4.19-pristine-source): Update hash.
 2019-12-21 07:18:04 -05:00
Mark H Weaver ca99c11804
gnu: linux-libre@4.14: Update to 4.14.160. 
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.160.
(linux-libre-4.14-pristine-source): Update hash.
 2019-12-21 07:17:13 -05:00
Mark H Weaver cc9e607dd0
gnu: linux-libre@4.9: Update to 4.9.207. 
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.207.
(linux-libre-4.9-pristine-source): Update hash.
 2019-12-21 07:16:37 -05:00
Mark H Weaver 6f45c6e05c
gnu: linux-libre@4.4: Update to 4.4.207. 
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.207.
(linux-libre-4.4-pristine-source): Update hash.
 2019-12-21 07:15:32 -05:00
Raghav Gururajan 4e09f57af8
gnu: Add gnome-characters. 
* gnu/packages/gnome.scm (gnome-characters): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2019-12-21 11:09:10 +01:00
Alex ter Weele 5613760aa4
gnu: Add emacs-punpun-theme. 
* gnu/packages/emacs-xyz.scm (emacs-punpun-theme): New variable.

Signed-off-by: Brett Gilio <brettg@gnu.org>
 2019-12-20 19:36:10 -06:00
Ricardo Wurmus 47ec013827
gnu: Add java-marlin-renderer. 
* gnu/packages/java-graphics.scm (java-marlin-renderer): New variable.
 2019-12-20 23:20:56 +01:00
Timotej Lazar 70f2920c37
gnu: Add xsnow. 
* gnu/packages/toys.scm (xsnow): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-12-20 22:45:57 +01:00
Ludovic Courtès 2d6f68aa3b
gnu: intel-mpi-benchmarks: Merge with "imb-openmpi". 
* gnu/packages/mpi.scm (intel-mpi-benchmarks): Remove.
* gnu/packages/benchmark.scm (imb): Rename to...
(intel-mpi-benchmarks): ... this.  Change 'name'.  Update to 2019.3.
[arguments]: Remove 'build phase.  Rewrite 'install phase.  Pass
 #:parallel-build? and #:make-flags.
(intel-mpi-benchmarks/openmpi): New variable.
(imb-openmpi): Rewrite in terms of 'deprecated-package'.
 2019-12-20 22:35:12 +01:00
Ludovic Courtès f94f9d67e6
gnupg: 'gnupg-verify*' returns a status symbol. 
This allows callers to distinguish between signature verification
failure and missing key.

* guix/gnupg.scm (gnupg-receive-keys): Return true on success.
(gnupg-verify*): Check return value of 'gnupg-receive-keys'.  Return two
values, the first one being a symbol.
* guix/upstream.scm (download-tarball): Get the two return values of
'gnupg-verify*', and match on the first one.
* gnu/packages/bash.scm (download-patches): Check the first return value
of 'gnupg-verify*'.
 2019-12-20 22:06:05 +01:00
Ricardo Wurmus 1101c73c7f
gnu: geda-gaf: Update to 1.10.0. 
* gnu/packages/engineering.scm (geda-gaf): Update to 1.10.0.
[arguments]: Adjust phase "disable-failing-tests".
[inputs]: Add gamin and python-2.
 2019-12-20 22:01:19 +01:00
Ricardo Wurmus 1e600ed0f7
gnu: Add gamin. 
* gnu/packages/gnome.scm (gamin): New variable.
 2019-12-20 21:26:58 +01:00
Ricardo Wurmus 046fecdcb9
gnu: r-desolve: Update to 1.27. 
* gnu/packages/cran.scm (r-desolve): Update to 1.27.
 2019-12-20 21:26:32 +01:00
Ricardo Wurmus 126a7b4418
gnu: r-insol: Update to 1.2.1. 
* gnu/packages/cran.scm (r-insol): Update to 1.2.1.
[propagated-inputs]: Remove r-rgdal.
 2019-12-20 21:26:31 +01:00
Ricardo Wurmus db904d5c86
gnu: r-plot3d: Update to 1.3. 
* gnu/packages/cran.scm (r-plot3d): Update to 1.3.
 2019-12-20 21:26:31 +01:00
Ricardo Wurmus 20622ad131
gnu: r-sctransform: Update to 0.2.1. 
* gnu/packages/cran.scm (r-sctransform): Update to 0.2.1.
[propagated-inputs]: Remove r-future.
 2019-12-20 21:26:31 +01:00
Ricardo Wurmus 550a1e01cc
gnu: r-rootsolve: Update to 1.8.2. 
* gnu/packages/cran.scm (r-rootsolve): Update to 1.8.2.
 2019-12-20 21:26:31 +01:00
Ricardo Wurmus 4aeb0a2b2e
gnu: r-reticulate: Update to 1.14. 
* gnu/packages/cran.scm (r-reticulate): Update to 1.14.
[propagated-inputs]: Add r-rappdirs.
 2019-12-20 21:26:31 +01:00
Ricardo Wurmus cd2652f6b8
gnu: r-pillar: Update to 1.4.3. 
* gnu/packages/cran.scm (r-pillar): Update to 1.4.3.
 2019-12-20 21:26:31 +01:00
Ricardo Wurmus bdf552ee4c
gnu: r-vctrs: Update to 0.2.1. 
* gnu/packages/cran.scm (r-vctrs): Update to 0.2.1.
 2019-12-20 21:26:31 +01:00
Ricardo Wurmus 63b4c77915
gnu: r-recipes: Update to 0.1.8. 
* gnu/packages/cran.scm (r-recipes): Update to 0.1.8.
 2019-12-20 21:26:31 +01:00
Ricardo Wurmus 571f4689f9
gnu: r-psych: Update to 1.9.12. 
* gnu/packages/cran.scm (r-psych): Update to 1.9.12.
 2019-12-20 21:26:31 +01:00
Ricardo Wurmus 6b662ce33e
gnu: r-bbmle: Update to 1.0.22. 
* gnu/packages/cran.scm (r-bbmle): Update to 1.0.22.
[propagated-inputs]: Add r-bdsmatrix, r-matrix, and r-mvtnorm.
 2019-12-20 21:26:30 +01:00
Ricardo Wurmus a3569a327a
gnu: Add r-bdsmatrix. 
* gnu/packages/cran.scm (r-bdsmatrix): New variable.
 2019-12-20 21:26:30 +01:00
Ricardo Wurmus ccf3cafa4c
gnu: r-latticeextra: Update to 0.6-29. 
* gnu/packages/statistics.scm (r-latticeextra): Update to 0.6-29.
[propagated-inputs]: Add r-jpeg and r-png.
 2019-12-20 21:26:30 +01:00
Ricardo Wurmus 95cd4a19cd
gnu: r-dt: Update to 0.11. 
* gnu/packages/statistics.scm (r-dt): Update to 0.11.
 2019-12-20 21:26:30 +01:00
Ricardo Wurmus 8dfaa62a9e
gnu: r-rsqlite: Update to 2.1.5. 
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.1.5.
 2019-12-20 21:26:30 +01:00
Ricardo Wurmus 8abfddb6b4
gnu: r-mime: Update to 0.8. 
* gnu/packages/statistics.scm (r-mime): Update to 0.8.
 2019-12-20 21:26:30 +01:00
Ricardo Wurmus 60cc8779cc
gnu: r-bh: Update to 1.72.0-2. 
* gnu/packages/statistics.scm (r-bh): Update to 1.72.0-2.
 2019-12-20 21:26:30 +01:00
Ricardo Wurmus 02ee630320
gnu: r-foreign: Update to 0.8-73. 
* gnu/packages/statistics.scm (r-foreign): Update to 0.8-73.
 2019-12-20 21:26:30 +01:00
Ricardo Wurmus ede38ffe16
gnu: r-mass: Update to 7.3-51.5. 
* gnu/packages/statistics.scm (r-mass): Update to 7.3-51.5.
 2019-12-20 21:26:30 +01:00
Ricardo Wurmus 20fb28b229
gnu: r-boot: Update to 1.3-24. 
* gnu/packages/statistics.scm (r-boot): Update to 1.3-24.
 2019-12-20 21:26:30 +01:00
Ricardo Wurmus 61e21c0899
gnu: r-scater: Update to 1.14.6. 
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.14.6.
 2019-12-20 21:26:26 +01:00
Leo Famulari 8246bbc30f
gnu: WireGuard: Update to 0.0.20191219. 
* gnu/packages/vpn.scm (wireguard): Update to 0.0.20191219.
 2019-12-20 14:26:14 -05:00