cd96573b73
gnu: superlu-dist: Fix linking with the ParMETIS shim of pt-scotch.
...
* gnu/packages/maths.scm (superlu-dist)[arguments]: Adjust library names
to match current ‘scotch’.
Change-Id: If64094c058cc3be58435fe1c47cc99fb0a9e1fff
2024-04-11 12:17:30 +02:00
68202bcc43
gnu: pt-scotch: Include <stdint.h> so ‘parmetis.h’ is usable.
...
Fixes a bug when building ‘superlu-dist’ where ‘int32_t’ would be
undefined.
* gnu/packages/maths.scm (scotch)[source]: Add ‘snippet’.
Change-Id: Id5beb2034d762727458821b93568e5b733184c00
2024-04-11 12:17:30 +02:00
6cf91aa1c8
gnu: octave-cli: Update to 9.1.0.
...
* gnu/packages/maths.scm (octave-cli): Update to 9.1.0.
Change-Id: I8b8c3245644e0958d13d635f514d7fcc1d656a91
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-04-07 19:40:49 +01:00
b6fa870405
gnu: libflame: Switch to openblas.
...
* gnu/packages/maths.scm (libflame): Switch input dependency from
lapack to openblas.
Change-Id: I7abdb8d126856488b0722b73c336309bf5c2234d
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-04-04 16:19:33 +02:00
8b38ecb521
gnu: python-cvxopt: Remove dependency on lapack.
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* gnu/packages/maths.scm (python-cvxopt): Remove dependency on lapack.
Change-Id: I2a28ecf1ab5ea7683d6b8adf72054d3f86892771
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-04-04 16:19:12 +02:00
b0b556cba4
gnu: scilab: Remove dependency on lapack.
...
* gnu/packages/maths.scm (scilab): Remove dependency on lapack.
Change-Id: I5c825c9e6eee6f7fbde078c67d3208fcadf100b6
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-04-04 16:19:04 +02:00
5d3fc03690
gnu: bonmin: Switch to openblas.
...
* gnu/packages/maths.scm (bonmin): Switch input dependency from
lapack to openblas.
Change-Id: I3f1ef50827873fdc1eddcd152a74ffbbbf02ee44
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-04-04 16:18:21 +02:00
da7f591619
gnu: superlu-dist: Remove dependency on lapack.
...
* gnu/packages/maths.scm (superlu-dist): Remove dependency on lapack.
Change-Id: I5893e16f7ef6fd688fd6b53eba6d3005b832f0ef
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-04-04 16:18:14 +02:00
8e9b803db2
gnu: elemental: Remove dependency on lapack.
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* gnu/packages/maths.scm (elemental): Remove dependency on lapack.
Change-Id: Iad28ceb70b87a26de75feec631b40aeedf977b53
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-04-04 16:18:11 +02:00
b38ec2f751
gnu: dealii: Remove dependency on lapack.
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* gnu/packages/maths.scm (dealii): Remove dependency on lapack.
Change-Id: I6f3439c886a574b8a8d2d91a4afa04ed09daba7f
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-04-04 16:18:08 +02:00
6e16c50b84
gnu: p4est: Remove dependency on lapack.
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* gnu/packages/maths.scm (p4est): Remove dependency on lapack.
Change-Id: I9c76f8b9ba3fc7d5feabfb059505f66ac50972c3
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-04-04 16:17:59 +02:00
a8b1096769
gnu: sundials-julia: Switch to openblas.
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* gnu/packages/maths.scm (sundials-julia): Switch input dependency from
lapack to openblas.
Change-Id: I7c5990b09f3a006600bab73ef998b081cbaa8935
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-04-04 16:17:42 +02:00
e423df6fa6
gnu: ceres: Remove dependency on lapack.
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* gnu/packages/maths.scm (ceres): Remove dependency to lapack.
Change-Id: Iac55faf30a83bbbe3693cac73a9996af8ddcbde7
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-04-04 16:17:35 +02:00
17c9c00521
gnu: ipopt: Switch to openblas.
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* gnu/packages/maths.scm (ipopt): Switch input dependency from
lapack to openblas and add required configure flags.
Change-Id: I58b84f0741a973adf81da1716e2e2659af1c50c4
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-04-04 16:17:33 +02:00
55d48b9a2f
gnu: gmsh: Switch to openblas.
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* gnu/packages/maths.scm (gmsh): Switch input dependency from
lapack to openblas.
Change-Id: Ib04c07a51f3af65d259b9970073ec1f68603aed4
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-04-04 16:17:27 +02:00
e2dd1cb536
gnu: itpp: Switch to openblas.
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* gnu/packages/maths.scm (itpp): Switch input dependency from
lapack to openblas.
Change-Id: I42606d5ed379093a076790d2b300dfa96f18d2ea
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-04-04 16:17:24 +02:00
0e8011a998
gnu: hypre: Switch to openblas.
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* gnu/packages/maths.scm (hypre): Switch input dependency from
lapack to openblas.
Change-Id: I8bc2c3abf0d3ead52c9616e1a23bf4ac6113ac3b
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-04-04 16:17:17 +02:00
2a9b6ac7ec
gnu: scalapack: Switch to openblas.
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* gnu/packages/maths.scm (scalapack): Switch input dependency from
lapack to openblas.
Change-Id: Ie025e6ced66c75755314b53989547ffe26fbcd11
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-04-04 16:17:14 +02:00
f51f351c1f
gnu: octave-cli: Switch to openblas.
...
* gnu/packages/maths.scm (octave-cli): Switch input dependency from
lapack to openblas.
Change-Id: I3a624a44c1c9bc6be7360cfecbb61c955fa0d209
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-04-04 16:17:12 +02:00
dc457d969b
gnu: armadillo: Switch to openblas.
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* gnu/packages/maths.scm (armadillo): Switch inputs from lapack to openblas.
Change-Id: I718371f2e95fafc31e5dccddccbc223c111f594d
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-04-04 16:17:11 +02:00
e7d134c22a
gnu: arpack-ng: Switch to openblas.
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* gnu/packages/maths.scm (arpack-ng): Switch inputs from lapack to openblas.
Change-Id: I0d825373f0f267cc97748a9c2c7de1d73698354e
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-04-04 16:17:07 +02:00
8fa0761264
Merge remote-tracking branch 'savannah/master' into gnome-team
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Change-Id: Iec8e15b79c6fde516294c2bfcaf8ee3575b1f745
2024-03-20 14:54:26 +00:00
b213afbf58
gnu: combinatorial-blas: Skip failing tests.
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* gnu/packages/maths.scm (combinatorial-blas): Add new phase.
Change-Id: Ifefb2b17e6758547d38290753a7cd338032a6abb
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-03-19 17:31:32 +01:00
618cae45dc
Merge remote-tracking branch 'savannah/master' into gnome-team
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Change-Id: I775274c2693536e2efa36c9abca4c54c5c458e26
2024-03-16 10:19:30 +00:00
0e00d2ced1
gnu: combinatorial-blas: Update source hash.
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Diffoscope shows there are changes, but they don't look significant.
* gnu/packages/maths.scm (combinatorial-blas): Update source hash.
Change-Id: I32db6df0ef7c652572b1e874fe22175a4b66af6e
2024-03-14 13:40:31 +00:00
f7e6a84e98
gnu: hypre: Honor the #:tests? flag.
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* gnu/packages/maths.scm (hypre)[arguments]: Adjust 'check phase to
honor the #:tests? flag.
Change-Id: I475fabd7d9f73ed320b97a4767830d82190c2b15
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2024-03-12 13:48:32 +02:00
6cff29fb6e
gnu: petsc: Add tunable property.
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Tested with some real-world simulations on multpiple HPC systems.
* gnu/packages/maths.scm (petsc)[properties]: Add tunable? flag.
Change-Id: I81588d0556c4176f29d7ab760322cd7aec271f12
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2024-03-12 13:48:32 +02:00
2ee5451319
Merge branch 'master' into gnome-team
2024-03-10 00:05:58 +01:00
d79c88e880
gnu: nauty: Update to 2.8.8.
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* gnu/packages/maths.scm (nauty): Update to 2.8.8.
Change-Id: I741b398e7ab367a7c82ee8cc454f1790524b5db6
2024-03-08 13:33:37 +01:00
b1a74ee76e
gnu: units: Update to 2.23.
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* gnu/packages/maths.scm (units): Update to 2.23.
Change-Id: Ia1b3df68c125631255cb3d28d2bf55d3148ee462
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2024-03-04 08:55:00 +02:00
25c14c893f
Merge branch 'master' into gnome-team
2024-03-02 12:22:34 +01:00
533942d513
gnu: giza: Update to 1.4.1.
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* gnu/packages/maths.scm (giza): Update to 1.4.1.
Change-Id: I7e6087e22cc6dea4a680fa45db155e42a724b50d
2024-02-27 22:51:56 +00:00
dcdc0a5592
gnu: petsc: Reduce closure size.
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Reduces closure size from 828 MiB to 463 MiB (44%) by removing
references to build dependencies such as GCC.
* gnu/packages/maths.scm (petsc)[arguments]: Add
‘clear-reference-to-compiler’ phase.
In ‘clean-install’ phase, also remove “configure-hash”.
Change-Id: I2e6900747b2118546f0a39ceb109b3f2f90e6949
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-02-27 11:51:06 +01:00
7bf4ce4582
Merge branch 'master' into gnome-team
2024-02-25 10:28:03 +01:00
0c3ae6dc84
gnu: arpack-ng: Update to 3.9.1.
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* gnu/packages/maths.scm (arpack-ng): Update to 3.9.1. Drop patch.
* gnu/packages/patches/arpack-ng-propagate-rng-state.patch: Remove file.
* gnu/packages/maths.scm (dist_patch_DATA): Unregister patch.
Change-Id: I33a666c3a88fb2f6791c8d698eeb054a831103fc
2024-02-14 14:38:02 +01:00
ff76def8a4
gnu: arpack-ng: Add preprocessor flag.
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* gnu/packages/maths.scm (arpack-ng): Add configure flag for building
ISO C binding headers.
Change-Id: Iddfd67094ffafc3cabd88353e3839e5e903b804a
Signed-off-by: Andreas Enge <andreas@enge.fr>
2024-02-14 14:36:55 +01:00
622df12ef3
Merge branch 'master' into gnome-team
2024-02-13 16:11:14 +01:00
41634d3b5f
gnu: frama-c: Update to 27.1.
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* gnu/packages/maths.scm (frama-c): Update to 27.1.
(why3): Update to 1.6.0.
Change-Id: I74191e4274d58a88a772413875fbf7de4d243fec
2024-02-08 23:23:08 +01:00
e6c847defb
Merge branch 'master' into gnome-team
2024-02-03 14:39:49 +01:00
037cb397c1
gnu: python-kiwisolver: Update to 1.4.5.
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* gnu/packages/maths.scm (python-kiwisolver): Update to 1.4.5.
[build-system]: Use pyproject-build-system.
[propagated-inputs]: Add python-typing-extension.
[native-inputs]: Add python-cppy, python-pytest, and python-setuptools-scm.
Change-Id: Iea75440dc58fa342dcf4a2a381b6dcc17e71e618
2024-01-16 12:44:35 +01:00
1cd97066c2
Merge branch 'master' into gnome-team
2024-01-01 21:56:00 +01:00
2a66a96634
gnu: scotch: Update to 7.0.4
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* gnu/packages/maths.scm (scotch): Update to version 7.0.4.
Change-Id: I493113ecc1694e8812fb38d8e4641398eb174b34
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-25 17:44:48 +01:00
24d4d6fdd6
Merge branch 'master' into gnome-team
2023-12-20 00:05:21 +01:00
4c323c2f83
Merge branch 'master' into HEAD
...
Change-Id: I3f5d121162d98ef2ae61a62c4da3b0fd19d864e8
2023-12-03 07:20:53 +01:00
1cc3b7e80f
Merge branch 'master' into gnome-team
...
Change-Id: I62da840b7600f2d3d8541e666d09e2f2a1b7d8c4
2023-11-19 10:02:15 +01:00
d335e24920
gnu: elemental: Update package style.
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* gnu/packages/maths.scm (elemental): Update package style, shift order
of package fields.
[arguments]: Use G-expressions. {phases}: Remove trailing #f from each
lambda.
Change-Id: Ib961eb99159e1206963041bd7014dca032a21441
Signed-off-by: Eric Bavier <bavier@posteo.net>
2023-11-18 19:56:30 -06:00
0cff3c49e1
gnu: elemental: Remove input labels.
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* gnu/packages/maths.scm (elemental)[inputs]: Remove labels.
Change-Id: I239b56cb5871d5cb2dbd587502c647a37beb30b7
Signed-off-by: Eric Bavier <bavier@posteo.net>
2023-11-18 19:56:29 -06:00
f653560990
gnu: elemental: Update to 0.87.7-0.6eb15a0.
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The build of elemental is failed on GCC 7+:
https://github.com/elemental/Elemental/issues/254
Fixed but not released yet in merge request:
https://github.com/elemental/Elemental/pull/259
* gnu/packages/maths.scm (elemental): Update to 0.87.7-0.6eb15a0.
Change-Id: I333f1de160489035f1a8875173abdd57c03ef777
Signed-off-by: Eric Bavier <bavier@posteo.net>
2023-11-18 19:56:29 -06:00
72e886328c
Merge branch 'master' into gnome-team
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Change-Id: I88d3789460d1a89917451d80405d89a2824006ac
2023-11-04 07:43:44 +01:00
e38d6a9c2f
Merge branch 'master' into gnome-team
...
Change-Id: Ib6f55bebef2fb235fa59fd5442102a3e0ace3191
2023-10-23 21:09:49 +02:00
Ludovic Courtès
Ludovic Courtès
Andy Tai
Romain GARBAGE
Christopher Baines
Lars Bilke
Liliana Marie Prikler
Nicolas Goaziou
Sharlatan Hellseher
Andreas Enge
Julien Lepiller
Ricardo Wurmus