me
/
guix
Archived
1
0
Fork 0
Code
46,350 Commits
1 Branch
0 Tags
410 MiB
Commit Graph

40045 Commits (86b995dcce534363ef56ae4335e402f77740ae24)

Author SHA1 Message Date
Marius Bakke 97149c5767
gnu: Adjust uses of C{,PLUS}_INCLUDE_PATH for GCC 7. 
These variables are no longer set in the build environment by default.  GCC
still respects these search paths and treats them as "system headers" so we
can continue to use them, just not expect them to be available.

* gnu/packages/mpi.scm (openmpi)[arguments]: Do not attempt to read from
C_INCLUDE_PATH, nor CPLUS_INCLUDE_PATH.
* gnu/packages/games.scm (kiki)[arguments]: Likewise.
* gnu/packages/networking.scm (hcxtools)[arguments]: Likewise.
* gnu/packages/synergy.scm (synergy)[arguments]: Likewise.
* gnu/packages/bioinformatics.scm (gemma, sailfish)[arguments]: Likewise.
* gnu/packages/maths.scm (dune-alugrid)[arguments]: Likewise.
 2019-07-14 18:13:34 +02:00
Marius Bakke ad60a3484c
gnu: gst-kaldi-nnet2-online: Adjust for GCC 7. 
* gnu/packages/machine-learning.scm (gst-kaldi-nnet2-online)[arguments]: Don't
read CPLUS_INCLUDE_PATH, or pass -std=c++11.  End phases on #t.
 2019-07-14 17:30:42 +02:00
Marius Bakke 344f358fba
gnu: rdma-core: Update to 22.3. 
* gnu/packages/linux.scm (rdma-core): Update to 22.3.
 2019-07-14 17:26:24 +02:00
Christopher Baines a5c2e7961c
gnu: python-gst: Fix build failure. 
Building python-gst fails with:

  Unbound variable: python-version

Therefore, add python-build-system to #:modules so that it's imported, and
give it a prefix to avoid clashing with the gnu-build-system.

Also, simplify the code by using the site-packages function from the
python-build-system module.

* gnu/packages/gstreamer.scm (python-gst)[arguments]: Rework to fix build
failure.
 2019-07-14 09:03:23 +01:00
Christopher Baines 2be878d8e5
gnu: python-pep8: Patch to fix test failure with Python 3.7. 
Patch from the upstream repository, see
https://github.com/PyCQA/pycodestyle/issues/786 for more details.

* gnu/packages/patches/python-pep8-stdlib-tokenize-compat.patch: New file.
* gnu/packages/python-xyz.scm (python-pep8)[source]: Add it.
 2019-07-14 09:03:19 +01:00
Leo Famulari 4f61513128
gnu: Go: Use the default libgcc. 
* gnu/packages/golang.scm (go-1.4)[inputs]: Replace gcc-6 with gcc.
 2019-07-13 17:41:21 -04:00
Christopher Baines 145fed2a2b
gnu: gobject-introspection: Remove hardcoded store from patch. 
* gnu/packages/patches/gobject-introspection-absolute-shlib-path.patch: Use
the NIX_STORE environment variable, rather than hardcoding the store
directory.
 2019-07-13 18:54:18 +01:00
Marius Bakke 26a7ff6e10
gnu: fontforge: Fix segfault on i686 (and possibly other platforms). 
* gnu/packages/fontutils.scm (fontforge)[source](patches): New field.
 2019-07-13 19:11:06 +02:00
Marius Bakke 33ef61ec72
gnu: fontforge: Remove superfluous input. 
Pango propagates Glib nowadays, no need to list it eplicitly.

* gnu/packages/fontutils.scm (fontforge)[inputs]: Remove GLIB.
 2019-07-13 19:10:09 +02:00
Marius Bakke 8cae550021
gnu: gexiv2: Enable tests on all platforms. 
* gnu/packages/gnome.scm (gexiv2)[arguments]: Remove.
 2019-07-13 18:53:23 +02:00
Marius Bakke e9194eb048
gnu: python-cython: Speed up test suite. 
* gnu/packages/python-xyz.scm (python-cython)[arguments]: In the CHECK phase,
disable compiler optimizations and enable (some) parallel tests.
 2019-07-13 18:51:16 +02:00
Marius Bakke da46086507
gnu: python2-cython: Fix failing test. 
This started failing because Python no longer bundles libexpat since
commit d1659c0fb2.

* gnu/packages/python-xyz.scm (python2-cython)[arguments]: New field.
 2019-07-13 18:50:59 +02:00
Marius Bakke 4c482696a6
gnu: node: Update to 10.16.0. 
* gnu/packages/node.scm (node): Update to 10.16.0.
[arguments]: Enable previously failing tests.  Disable
'sequential/test-performance.js' and 'parallel/test-dns.js'.
 2019-07-13 01:43:47 +02:00
Marius Bakke 7555d53924
gnu: gnome-online-accounts: Fix cyclic reference in outputs. 
This exploits a new feature of 'gobject-introspection-absolute-shlibs.patch'.

* gnu/packages/gnome.scm (gnome-online-accounts)[arguments]: Set the "outputs"
variable before building.
 2019-07-12 20:07:12 +02:00
Marius Bakke 70f2b0f97d
gnu: libgnomekbd: Update to 3.26.1. 
* gnu/packages/gnome.scm (libgnomekbd): Update to 3.26.1.
 2019-07-12 19:50:28 +02:00
Marius Bakke 838a52a5fd
gnu: vte: Update to 0.56.3. 
* gnu/packages/gnome.scm (vte): Update to 0.56.3.
 2019-07-12 19:45:47 +02:00
Marius Bakke 2f15e0a1eb
gnu: samba: Provide 'rpcgen'. 
Glibc no longer includes Sun/ONC RPC support since commit
3670ea70e2.

* gnu/packages/samba.scm (samba)[native-inputs]: Add RPCSVC-PROTO.
 2019-07-12 19:44:30 +02:00
Marius Bakke 56174ade33
gnu: Add rpcsvc-proto. 
* gnu/packages/onc-rpc.scm (rpcsvc-proto): New public variable.
 2019-07-12 19:44:30 +02:00
Marius Bakke 07ace64143
gnu: gnome-calculator: Update to 3.32.2. 
* gnu/packages/gnome.scm (gnome-calculator): Update to 3.32.2.
[inputs]: Change GTKSOURCEVIEW-3 to GTKSOURCEVIEW.
 2019-07-12 17:37:54 +02:00
Marius Bakke 44d9e575df
gnu: gtksourceview: Update to 4.2.0. 
* gnu/packages/gtk.scm (gtksourceview): Update to 4.2.0.
 2019-07-12 17:37:32 +02:00
Marius Bakke 03ecf85a76
gnu: gcr: Fix build with recent Glib. 
* gnu/packages/gnome.scm (gcr)[source](patches): New field.
 2019-07-12 16:51:57 +02:00
Marius Bakke 4b8f131345
gnu: glib-networking: Remove unused input. 
This is a follow-up to commit 0d75c64d78.

* gnu/packages/gnome.scm (glib-networking)[inputs]: Remove P11-KIT.
 2019-07-12 16:51:22 +02:00
Marius Bakke ee46474d54
gnu: glib: Fix argument handling in keyfile backend. 
* gnu/packages/patches/glib-keyfile-arguments.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/glib.scm (glib)[source](patches): Add it.
 2019-07-12 16:50:14 +02:00
Marius Bakke 60ccc1653a
gnu: Remove expat/fixed. 
The merge preceding this commit (fb9a23a3f3) ignored the replacement added in
5a836ce38c (gnu: expat: fix CVE-2018-20843), because the fix is already
present in Expat 2.2.7.  This commit removes the remaining bits.

* gnu/packages/patches/expat-CVE-2018-20843.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/xml.scm (expat/fixed): Remove variable.
 2019-07-12 01:05:13 +02:00
Marius Bakke fb9a23a3f3
Merge branch 'master' into core-updates 
Conflicts:
	gnu/local.mk
	gnu/packages/python-xyz.scm
	gnu/packages/xml.scm
	guix/gexp.scm
	po/guix/POTFILES.in
 2019-07-12 01:03:53 +02:00
Jack Hill 5a836ce38c
gnu: expat: fix CVE-2018-20843 
* gnu/packages/xml.scm (expat)[replacement]: New field.
(expat/fixed): New variable.
* gnu/packages/patches/expat-CVE-2018-20843.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch file.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-07-12 00:39:01 +02:00
Jack Hill f85c8dd8ae
gnu: expat: Add additional source URI 
The expat sourceforge page announces that the project is in the process of
moving to GitHub.

* gnu/packages/xml.scm (expat)[source]: Add GitHub URI.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-07-12 00:39:01 +02:00
Ricardo Wurmus c5ac35d750
gnu: mumi: Update to 0.0.0-4.ea0a28f. 
* gnu/packages/mail.scm (mumi): Update to 0.0.0-4.ea0a28f.
 2019-07-11 23:48:08 +02:00
Pierre Langlois c894b80324
gnu: sbcl-clx: Update to 0.7.5. 
* gnu/packages/lisp.scm (sbcl-clx): Update to 0.7.5.
[origin]: Drop "clx-remove-demo.patch" and the snippet that removes demo code.
* gnu/packages/patches/clx-remove-demo.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-07-11 23:15:00 +02:00
Ludovic Courtès 3fb666bd40
gnu: pies: Update to 1.4. 
* gnu/packages/admin.scm (pies): Update to 1.4.
[arguments]: Modify /bin/sh reference in src/comp.c as well.
 2019-07-11 23:13:27 +02:00
Marius Bakke 878a6baa4c
Merge branch 'staging' 2019-07-11 20:33:44 +02:00
Marius Bakke 1c4b72cb34
gnu: harfbuzz: Create hb-gobject-enums.h. 
* gnu/packages/gtk.scm (harfbuzz)[native-inputs]: Add GLIB:BIN.
 2019-07-11 19:17:57 +02:00
Mark H Weaver 1c65b0e9d5
gnu: linux-libre: Update to 5.1.17. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.1.17.
(%linux-libre-hash): Update hash.
 2019-07-11 12:16:40 -04:00
Mark H Weaver cba1dc68da
gnu: linux-libre@4.19: Update to 4.19.58. 
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.58.
(%linux-libre-4.19-hash): Update hash.
 2019-07-11 12:15:47 -04:00
Mark H Weaver 783ebb961e
gnu: linux-libre@4.14: Update to 4.14.133. 
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.133.
(%linux-libre-4.14-hash): Update hash.
 2019-07-11 12:14:56 -04:00
Mark H Weaver d6fa410c1d
gnu: linux-libre@4.9: Update to 4.9.185. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.185.
 2019-07-11 12:14:16 -04:00
Mark H Weaver 17f874c594
gnu: linux-libre@4.4: Update to 4.4.185. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.185.
 2019-07-11 12:13:30 -04:00
Marius Bakke dc23bb4513
gnu: python-pyicu: Update to 2.3.1. 
* gnu/packages/python-xyz.scm (python-pyicu): Update to 2.3.1.
 2019-07-11 15:42:42 +02:00
Marius Bakke 568d060327
gnu: libselinux: Install python bindings to separate output. 
This reduces the closure size of glib from 203.1 to 111.3 MiB.

* gnu/packages/selinux.scm (libselinux)[outputs]: New field.
[arguments]: Set PYSITEDIR to the new "python" output.
 2019-07-11 15:40:20 +02:00
Efraim Flashner deae64ce01
gnu: vim-airline-themes: Update to 0.0.0-2.e6f2332. 
* gnu/packages/vim.scm (vim-airline-themes): Update to 0.0.0-2.e6f2332.
[version]: Use 'git-version'.
[source]: Use 'git-file-name'.
 2019-07-11 14:57:38 +03:00
Efraim Flashner 34e549d813
gnu: msmtp: Install additional files. 
* gnu/packages/mail.scm (msmtp)[arguments]: Rename custom phase
install-msmtpq to install-additional-files. Install vim plugins.
 2019-07-11 09:56:08 +03:00
Tobias Geerinckx-Rice 78ca483a07
gnu: perl-xml-compile: Update to 1.63. 
* gnu/packages/xml.scm (perl-xml-compile): Update to 1.63.
 2019-07-11 00:27:27 +02:00
Tobias Geerinckx-Rice cf1b1ab007
gnu: perl-html-form: Update to 6.04. 
* gnu/packages/web.scm (perl-html-form): Update to 6.04.
 2019-07-11 00:27:27 +02:00
Tobias Geerinckx-Rice 4cf57c3c8d
gnu: xscreensaver: Remove CFLAG for old gcc versions. 
* gnu/packages/xdisorg.scm (xscreensaver)[arguments]: Do what the
comment tells us.
 2019-07-11 00:27:27 +02:00
Tobias Geerinckx-Rice 4995a40478
gnu: xscreensaver: Update to 5.43. 
* gnu/packages/xdisorg.scm (xscreensaver): Update to 5.43.
 2019-07-11 00:27:27 +02:00
Tobias Geerinckx-Rice 347b4c47b4
gnu: acpica: Update to 20190703. 
* gnu/packages/admin.scm (acpica): Update to 20190703.
 2019-07-10 23:23:45 +02:00
Tobias Geerinckx-Rice 975a0c15ea
gnu: sedsed: Edit description. 
* gnu/packages/admin.scm (sedsed)[description]: Use @command{} instead
of command(n) and do some minor editing.
 2019-07-10 23:23:45 +02:00
Tobias Geerinckx-Rice fbdabdad2d
gnu: sedsed: Use HTTPS home page. 
* gnu/packages/admin.scm (sedsed)[home-page]: Use HTTPS.
 2019-07-10 23:23:45 +02:00
Efraim Flashner bba3c48970
gnu: cvs: Rename patch file. 
* gnu/packages/version-control.scm (cvs)[source]: Rename patch.
* gnu/packages/patches/cvs-2017-12836.patch: Rename to ...
* gnu/packages/patches/cvs-CVE-2018-12836.patch: ... this.
* gnu/local.mk (dist_patch_DATA): Register it.
 2019-07-10 21:33:48 +03:00
Efraim Flashner 5a4e5c26cc
gnu: libexif: Fix CVE-2018-20030. 
* gnu/packages/photo.scm (libexif)[source]: Add patch.
* gnu/packages/patches/libexif-CVE-2018-20030.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2019-07-10 21:33:48 +03:00
Efraim Flashner 037036cb19
gnu: strongswan: Update to 5.8.0 [fixes CVE-2018-17540, CVE-2018-2065{0,1}]. 
* gnu/packages/networking.scm (strongswan): Update to 5.8.0.
 2019-07-10 21:33:48 +03:00
Efraim Flashner 666879604c
gnu: net-snmp: Mark package not affected by CVE-2015-8100. 
* gnu/packages/networking.scm (net-snmp)[properties]: New field.
 2019-07-10 21:33:34 +03:00
Marius Bakke ff1e80d791
gnu: python-cram: Fix build. 
* gnu/packages/python-xyz.scm (python-cram)[arguments]: Do not require 100%
test coverage.  While here, do not move the 'check' phase, as
PYTHON-BUILD-SYSTEM now runs tests after install by default.
 2019-07-10 20:25:40 +02:00
Marius Bakke fa0d5854ef
gnu: ToME4: Fix FTBFS with GCC 7. 
* gnu/packages/games.scm (tome4)[arguments]: Preserve CPATH in 'set-sdl-paths'
phase..
 2019-07-10 20:23:46 +02:00
Tobias Geerinckx-Rice e14c06d87a
gnu: testdisk: Download over HTTPS. 
* gnu/packages/admin.scm (testdisk)[source]: Use HTTPS.
 2019-07-10 17:39:28 +02:00
Tobias Geerinckx-Rice 2b336e9354
gnu: testdisk: Update to 7.1. 
* gnu/packages/admin.scm (testdisk): Update to 7.1.
 2019-07-10 17:39:28 +02:00
Tobias Geerinckx-Rice bde9912506
gnu: sedsed: Update to 1.1. 
* gnu/packages/admin.scm (sedsed): Update to 1.1.
[arguments]: Use (default) Python (3).
 2019-07-10 17:39:28 +02:00
Tobias Geerinckx-Rice b7e26ec695
gnu: sedsed: Symlink after wrapping. 
Drop unused .sedsed-real symlink and avoid sedsed → sedsed.py
→ .sedsed.py-real exec chain.

* gnu/packages/admin.scm (sedsed)[arguments]: Move ‘symlink’ phase
after ‘wrap’.
 2019-07-10 17:39:28 +02:00
Tobias Geerinckx-Rice ec40227b2c
gnu: mutter: Remove duplicate gtk+ input. 
* gnu/packages/gnome.scm (mutter)[arguments]: Remove duplicate gtk+
from propagated-inputs.
 2019-07-10 17:39:28 +02:00
Efraim Flashner 841bddb4b4
gnu: a2ps: Fix CVE-2015-8107. 
* gnu/packages/pretty-print.scm (a2ps)[source]: Add patch.
* gnu/packages/patches/a2ps-CVE-2015-8107.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2019-07-10 12:47:47 +03:00
Efraim Flashner 3e4afe0298
gnu: mupdf: Update to 1.15.0 [fixes CVE-2018-18662, CVE-2018-19777, 
CVE-2018-1988{1,2}, CVE-2019-613{0,1}, CVE-2019-7321].

* gnu/packages/pdf.scm (mupdf): Update to 1.15.0.
[source]: Update source snippet.
 2019-07-10 12:46:02 +03:00
Efraim Flashner cb5b51498b
gnu: mujs: Update to 1.0.6 [fixes CVE-2019-1141{1,2,3}, CVE-2019-12798]. 
* gnu/packages/javascript.scm (mujs): Update to 1.0.6.
[source]: Download using url-fetch.
[arguments]: Update 'install-shared-library phase.
[home-page]: Update to new home-page.
 2019-07-10 12:45:35 +03:00
Efraim Flashner 05f386f103
gnu: plib: Fix CVE-2011-4620, CVE-2012-4552. 
* gnu/packages/game-development.scm (plib)[patches]: Add patches.
* gnu/packages/patches/plib-CVE-2011-4620.patch,
gnu/packages/patches/plib-CVE-2012-4552.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
 2019-07-10 12:45:34 +03:00
Efraim Flashner ba70479753
gnu: python-gnupg: Update to 0.4.4 [fixes CVE-2019-6690]. 
* gnu/packages/gnupg.scm (python-gnupg): Update to 0.4.4.
 2019-07-10 12:45:24 +03:00
Efraim Flashner 11450f15b4
gnu: gpgme: Add updater properties. 
* gnu/packages/gnupg.scm (gpgme)[properties]: New field. Add ftp-server,
ftp-directory.
 2019-07-10 11:40:55 +03:00
Efraim Flashner ec3f88af7e
gnu: npth: Add updater properties. 
* gnu/packages/gnupg.scm (npth)[properties]: New field. Add ftp-server,
ftp-directory.
 2019-07-10 11:39:09 +03:00
Efraim Flashner ee755b702f
gnu: gpa: Update to 0.10.0. 
* gnu/packages/gnupg.scm (gpa): Update to 0.10.0.
 2019-07-10 11:06:32 +03:00
Efraim Flashner 9a451a6740
gnu: gpa: Add updater properties. 
* gnu/packages/gnupg.scm (gpa)[properties]: New field, add ftp-server,
ftp-directory.
 2019-07-10 11:06:31 +03:00
Efraim Flashner 2d775ed2d6
gnu: postgresql@9: Update to 9.6.14 [fixes CVE-2018-1058, CVE-2019-9193] 
* gnu/packages/databases.scm (postgresql@9): Update to 9.6.14.
 2019-07-10 11:06:15 +03:00
Efraim Flashner e5b810f755
gnu: gnupg: Update to 2.2.17. 
* gnu/packages/gnupg.scm (gnupg): Update to 2.2.17.
 2019-07-10 09:56:08 +03:00
Mark H Weaver 6c83c48391
gnu: icecat: Update to 60.8.0-guix1 [security fixes]. 
Includes fixes for CVE-2019-9811, CVE-2019-11709, CVE-2019-11711,
CVE-2019-11712, CVE-2019-11713, CVE-2019-11715, CVE-2019-11717,
CVE-2019-11719, CVE-2019-11729, and CVE-2019-11730.

* gnu/packages/gnuzilla.scm (%icecat-version): Update to 60.8.0-guix1.
(icecat-source)[upstream-firefox-source]: Update hash.
(icecat): Refresh some stale comments.
 2019-07-09 19:31:36 -04:00
Marius Bakke 7a05fdd0e1
Merge branch 'master' into staging 2019-07-10 00:55:42 +02:00
Marius Bakke 760d90cc6a
gnu: ungoogled-chromium: Increase build timeout. 
* gnu/packages/chromium.scm (ungoogled-chromium)[properties]: Set TIMEOUT to
40 hours.
 2019-07-10 00:54:29 +02:00
Marius Bakke c1f4073ff5
gnu: rapidjson: Fix FTBFS with GCC 7. 
* gnu/packages/patches/rapidjson-gcc-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/web.scm (rapidjson)[source](patches): New field.
 2019-07-10 00:29:32 +02:00
Marius Bakke 78affefecc
gnu: oath-toolkit: Fix FTBFS with GCC 7. 
* gnu/packages/authentication.scm (oath-toolkit)[source](patches): Add
upstream patch.
 2019-07-09 23:35:30 +02:00
Tobias Geerinckx-Rice 12b1ec6617
gnu: iproute2: Update to 5.2.0. 
* gnu/packages/linux.scm (iproute): Update to 5.2.0.
 2019-07-09 23:08:50 +02:00
Marius Bakke 4e073dcd41
gnu: glib: Remove superfluous input. 
* gnu/packages/glib.scm (glib)[inputs]: Remove BASH.
 2019-07-09 22:17:39 +02:00
Marius Bakke 9e13a3e059
gnu: glib: Update to 2.60.5. 
* gnu/packages/glib.scm (glib): Update to 2.60.5.
 2019-07-09 22:16:30 +02:00
Marius Bakke e81b14f08d
gnu: freetype: Update to 2.10.1. 
* gnu/packages/fontutils.scm (freetype): Update to 2.10.1.
[source](uri): Adjust for new tarball name.
 2019-07-09 21:26:21 +02:00
Marius Bakke 7fe6dcf708
gnu: Remove indent@2.2.10. 
* gnu/packages/code.scm (indent): Update to 2.2.12.
[native-inputs]: Add TEXINFO.
(indent-2.2.12): Remove variable.
 2019-07-09 21:09:47 +02:00
Marius Bakke 33f460addf
gnu: flex: Remove superfluous input. 
The configure script will warn that "make indent" is unavailable, but
apart from that this input is not actually used for the build process.

* gnu/packages/flex.scm (flex)[inputs]: Remove INDENT.
* gnu/packages/commencement.scm (flex-boot0)[inputs]: Likewise.
 2019-07-09 21:07:13 +02:00
Marius Bakke 680bc34da4
gnu: Python: Update to 3.7.4. 
* gnu/packages/python.scm (python-3.7): Update to 3.7.4.
[source](snippet): Move disabled tests ...
[arguments]<#:make-flags>: ... here.  Enable previously failing tests.
<#:phases>: Add 'set-TZDIR'.
[native-inputs]: Add TZDATA-FOR-TESTS.
* gnu/packages/commencement.scm (python-boot0)[arguments]: Clear <#:make-flags>.
Delete 'set-TZDIR' phase.
* gnu/packages/patches/python-3-fix-tests.patch: Disable two new tests that do
not work in the build container.  Adjust context.
 2019-07-09 20:59:58 +02:00
Oleg Pykhalov 38a9b4b74e
gnu: python-internetarchive: Update to 1.8.5. 
* gnu/packages/web.scm (python-internetarchive)[version]: Update to 1.8.5.
[source](modules, snippet): New fields.
 2019-07-09 20:41:14 +03:00
Kei Kebreau d4137d84ac
gnu: make-glibc-locales: Adjust patch for glibc 2.29. 
The patch for glibc 2.28 and earlier replaces the same content, but the context
in the patch is different enough to fail to merge.

* gnu/packages/base.scm (make-glibc-locales)[source]: Add patch.
* gnu/packages/patches/glibc-locales.patch: Adjust for glibc 2.29 and move old
file...
* gnu/packages/patches/glibc-locales-2.28.patch: ...here.
* gnu/local.mk (dist_patch_DATA): Add it.
 2019-07-09 12:15:52 -04:00
Efraim Flashner 710f027765
gnu: wgetpaste: Update to 2.29. 
* gnu/packages/wget.scm (wgetpaste): Update to 2.29.
[arguments]: Replace default paste service. Install license file.
 2019-07-09 16:52:59 +03:00
Oleg Pykhalov 534ceb7de1
gnu: emacs-stumpwm-mode: Update to 0.0.1-1.8fbe071. 
* gnu/packages/emacs-xyz.scm (emacs-stumpwm-mode): Update to 0.0.1-1.8fbe071.
 2019-07-09 14:42:22 +03:00
Tobias Geerinckx-Rice 48182cff03
gnu: r-biocinstaller: Remove entirely. 
This follows up on commit 0971f8bd88,
which led to ‘r-biocmanager: unbound variable’ errors.  See
<https://lists.gnu.org/archive/html/guix-devel/2019-07/msg00120.html>.

* gnu/packages/bioinformatics.scm (r-biocinstaller): Remove variable.
 2019-07-09 13:26:26 +02:00
Hartmut Goebel 582de58c69
gnu: Add anonip. 
* gnu/packages/web.scm (anonip): New variable.
 2019-07-09 13:20:36 +02:00
Nicolas Goaziou 3c2bbbb0ff
gnu: snap: Update to 5.0.1. 
* gnu/packages/education.scm (snap): Update to 5.0.1.
 2019-07-09 09:13:43 +02:00
Nicolas Goaziou 032ca4baa7
gnu: musescore: Update to 3.2.3. 
* gnu/packages/music.scm (musescore): Update to 3.2.3.
 2019-07-09 09:02:50 +02:00
Tobias Geerinckx-Rice 3fd3dd33cb
gnu: libmicrohttpd: Update to 0.9.65. 
* gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.65.
 2019-07-09 04:48:02 +02:00
Carl Dong ca3757e1c2
gnu: glibc: Add 2.27 supported locales patch. 
The 'glibc-supported-locales.patch' was updated for glibc 2.29, breaking
compatibility with 2.27. Add a 2.27-specific supported locales patch.

* gnu/packages/patches/glibc-2.27-supported-locales.patch: New file.
* gnu/packages/base.scm (glibc-2.27)[source](patches): Use
'glibc-2.27-supported-locales.patch' instead.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2019-07-08 21:20:17 -04:00
Tobias Geerinckx-Rice 35014c402d
gnu: grub: Build ‘grub-mount’. 
This increases the closure size by a mere 1.8 MiB (0.8%).

* gnu/packages/bootloaders.scm (grub)[inputs]: Add fuse.
 2019-07-09 01:43:31 +02:00
Tobias Geerinckx-Rice 069ab3bbfd
gnu: grub: Update to 2.04. 
* gnu/packages/bootloaders.scm (grub): Update to 2.04.
[source]: Remove upstreamed patches.
[arguments]: Don't require Python.  Add a ‘disable-pixel-perfect-test’
phase to skip tests that fail with with our newer Unifont.
* gnu/packages/patches/grub-efi-fat-serial-number.patch: Adjust context.
* gnu/packages/patches/grub-binutils-compat.patch,
gnu/packages/patches/grub-check-error-efibootmgr.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2019-07-09 01:28:11 +02:00
Carl Dong bcfc54fff8
gnu: Update to 0.18.0. 
* gnu/packages/finance.scm (bitcoin-core): Update to 0.18.0.
[inputs]: Use bdb-4.8 for compatibility.
[arguments]: Remove --with-incompatible-bdb from configure flags and add
check-functional phase for functional tests.
 2019-07-08 16:22:01 -04:00
Carl Dong 883fe9bb91
gnu: bdb: Add 4.8.30. 
* gnu/packages/dbm.scm (bdb-4.8): New variable.
[arguments]: Configure and build from 'build_unix' directory as
mentioned in documentation.
(bdb-5.3): Inherit from bdb-4.8.
(bdb-6): Inherit from bdb-4.8.
(bdb): Point to bdb-6.
 2019-07-08 16:21:48 -04:00
Tobias Geerinckx-Rice 0971f8bd88
gnu: Remove r-biocinstaller. 
It requires R < 3.6 and is no longer supported.

* gnu/packages/bioinformatics.scm (r-biocinstaller): Define as
deprecated in favour of r-biocmanager.
 2019-07-08 16:13:11 +02:00
Tobias Geerinckx-Rice 1042e3481d
gnu: r-xbioc: Update to 0.1.16-1.6ff0670. 
This is needed to deprecate r-biocinstaller, which is no longer
distributed.

* gnu/packages/bioinformatics.scm (r-xbioc): Update to 0.1.16-1.6ff0670.
[propagated-inputs]: Replace deprecated r-biocinstaller with
r-biocmanager.
 2019-07-08 16:11:55 +02:00
Tobias Geerinckx-Rice ddfb62807d
gnu: cmh: Fix build. 
This follows up on commit 1de48e8f8a.

* gnu/packages/algebra.scm (fplll-4-cmh): New variable.
(cmh)[inputs]: Use it.
 2019-07-08 15:48:07 +02:00
Tobias Geerinckx-Rice 69e3512b7c
gnu: libomp: Download over HTTPS. 
* gnu/packages/llvm.scm (libomp)[source]: Use HTTPS.
 2019-07-08 15:33:35 +02:00