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67128 Commits (882ae6dcaa103feabf56dbcef041743e362d6543)

Author SHA1 Message Date
Ricardo Wurmus 882ae6dcaa
gnu: r-fields: Update to 11.5. 
* gnu/packages/cran.scm (r-fields): Update to 11.5.
 2020-10-06 00:34:59 +02:00
Ricardo Wurmus 79f1b40303
gnu: r-gmp: Update to 0.6-1. 
* gnu/packages/cran.scm (r-gmp): Update to 0.6-1.
 2020-10-06 00:34:59 +02:00
Ricardo Wurmus 876a326a0f
gnu: r-bigrquery: Update to 1.3.2. 
* gnu/packages/cran.scm (r-bigrquery): Update to 1.3.2.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus 405c7e6550
gnu: r-fftwtools: Update to 0.9-9. 
* gnu/packages/cran.scm (r-fftwtools): Update to 0.9-9.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus f273105b74
gnu: r-afex: Update to 0.28-0. 
* gnu/packages/cran.scm (r-afex): Update to 0.28-0.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus 7e0e3a6512
gnu: r-npsurv: Update to 0.5-0. 
* gnu/packages/cran.scm (r-npsurv): Update to 0.5-0.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus f7730afb5e
gnu: r-lsei: Update to 1.3-0. 
* gnu/packages/cran.scm (r-lsei): Update to 1.3-0.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus bc249d37d9
gnu: r-usethis: Update to 1.6.3. 
* gnu/packages/cran.scm (r-usethis): Update to 1.6.3.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus aed63a8731
gnu: r-sjplot: Update to 2.8.5. 
* gnu/packages/cran.scm (r-sjplot): Update to 2.8.5.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus 08f7d7d71b
gnu: r-effectsize: Update to 0.3.3. 
* gnu/packages/cran.scm (r-effectsize): Update to 0.3.3.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus d7beb6da1c
gnu: r-emmeans: Update to 1.5.1. 
* gnu/packages/cran.scm (r-emmeans): Update to 1.5.1.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus 336804fc1d
gnu: r-multcomp: Update to 1.4-14. 
* gnu/packages/cran.scm (r-multcomp): Update to 1.4-14.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus 65f463d3d8
gnu: r-sandwich: Update to 3.0-0. 
* gnu/packages/cran.scm (r-sandwich): Update to 3.0-0.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus 0ac936ea21
gnu: r-deriv: Update to 4.1.0. 
* gnu/packages/cran.scm (r-deriv): Update to 4.1.0.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus 5522640faf
gnu: r-sjlabelled: Update to 1.1.7. 
* gnu/packages/cran.scm (r-sjlabelled): Update to 1.1.7.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus b8b75e46b5
gnu: r-insight: Update to 0.9.6. 
* gnu/packages/cran.scm (r-insight): Update to 0.9.6.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus 75c394abbf
gnu: r-bibtex: Update to 0.4.2.3. 
* gnu/packages/cran.scm (r-bibtex): Update to 0.4.2.3.
 2020-10-06 00:34:58 +02:00
Ricardo Wurmus 794a6bc342
gnu: r-openxlsx: Update to 4.2.2. 
* gnu/packages/cran.scm (r-openxlsx): Update to 4.2.2.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus e3b821456b
gnu: r-import: Update to 1.2.0. 
* gnu/packages/cran.scm (r-import): Update to 1.2.0.
[native-inputs]: Add r-knitr.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus 6fbb3c9abe
gnu: r-trend: Update to 1.1.4. 
* gnu/packages/cran.scm (r-trend): Update to 1.1.4.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus e010576266
gnu: r-statnet-common: Update to 4.4.1. 
* gnu/packages/cran.scm (r-statnet-common): Update to 4.4.1.
[propagated-inputs]: Add r-rle.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus 4cd4cf0925
gnu: r-tinytex: Update to 0.26. 
* gnu/packages/cran.scm (r-tinytex): Update to 0.26.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus 5f777b5ff2
gnu: r-xfun: Update to 0.18. 
* gnu/packages/cran.scm (r-xfun): Update to 0.18.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus c4eff84f76
gnu: r-seriation: Update to 1.2-9. 
* gnu/packages/cran.scm (r-seriation): Update to 1.2-9.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus e3199b4b4d
gnu: r-dtw: Update to 1.22-3. 
* gnu/packages/cran.scm (r-dtw): Update to 1.22-3.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus 54753cf0ee
gnu: r-vcd: Update to 1.4-8. 
* gnu/packages/cran.scm (r-vcd): Update to 1.4-8.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus daba9cffc2
gnu: r-hardyweinberg: Update to 1.6.8. 
* gnu/packages/cran.scm (r-hardyweinberg): Update to 1.6.8.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus fec04395bb
gnu: r-broom: Update to 0.7.1. 
* gnu/packages/cran.scm (r-broom): Update to 0.7.1.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus 6016d52f42
gnu: r-psych: Update to 2.0.9. 
* gnu/packages/cran.scm (r-psych): Update to 2.0.9.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus f8ca0afa19
gnu: r-lava: Update to 1.6.8. 
* gnu/packages/cran.scm (r-lava): Update to 1.6.8.
[native-inputs]: Add r-knitr.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus 271e4a325e
gnu: r-getoptlong: Update to 1.0.3. 
* gnu/packages/cran.scm (r-getoptlong): Update to 1.0.3.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus 4fcf7626f7
gnu: r-htmltable: Update to 2.1.0. 
* gnu/packages/cran.scm (r-htmltable): Update to 2.1.0.
 2020-10-06 00:34:57 +02:00
Ricardo Wurmus 1b3d184e67
gnu: r-htmlwidgets: Update to 1.5.2. 
* gnu/packages/cran.scm (r-htmlwidgets): Update to 1.5.2.
[native-inputs]: Add r-knitr.
 2020-10-06 00:34:56 +02:00
Ricardo Wurmus 5f9f23f43c
gnu: r-rticles: Update to 0.16. 
* gnu/packages/cran.scm (r-rticles): Update to 0.16.
 2020-10-06 00:34:56 +02:00
Ricardo Wurmus d7cfdc1229
gnu: r-fhtest: Update to 1.5. 
* gnu/packages/bioconductor.scm (r-fhtest): Update to 1.5.
 2020-10-06 00:34:56 +02:00
Ricardo Wurmus 65e361f98f
gnu: r-interval: Update to 1.1-0.7. 
* gnu/packages/bioconductor.scm (r-interval): Update to 1.1-0.7.
 2020-10-06 00:34:56 +02:00
Ricardo Wurmus 5412da848e
gnu: r-activedriverwgs: Update to 1.1.1. 
* gnu/packages/bioconductor.scm (r-activedriverwgs): Update to 1.1.1.
 2020-10-06 00:34:56 +02:00
Ricardo Wurmus b0728c4d7e
gnu: Add r-slider. 
* gnu/packages/cran.scm (r-slider): New variable.
 2020-10-06 00:34:56 +02:00
Ricardo Wurmus 64d4816881
gnu: Add r-warp. 
* gnu/packages/cran.scm (r-warp): New variable.
 2020-10-06 00:34:56 +02:00
Ricardo Wurmus f5defed0df
gnu: Add r-rle. 
* gnu/packages/cran.scm (r-rle): New variable.
 2020-10-06 00:34:53 +02:00
Ludovic Courtès 880fe019ae
build: Use a 'guile' executable that doesn't warn about locales. 
This gets rid of:

  guile: warning: failed to install locale

when running the 'guix' command on a foreign distro where 'GUIX_LOCPATH'
isn't set.

* Makefile.am (pkglibexec_PROGRAMS, guile_SOURCES, guile_LDADD)
(guile_CFLAGS): New variables.
(install-exec-hook): New target.
(AUX_FILES): Remove 'guile-launcher.c'.
* configure.ac: Use 'GUILE_FLAGS'.
 2020-10-05 23:19:19 +02:00
Ludovic Courtès 1d4ab335b2
self: Use a 'guile' that doesn't complain about locales. 
Since commit ba48895899, selected UTF-8
locales are bundled.  However, because 'guix-command' is itself a Guile
script, users would still see Guile's warning, particularly on foreign
distros:

  $ LC_ALL=sdf guix foo
  guile: warning: failed to install locale
  hint: Consider installing the `glibc-utf8-locales' [...]

User commands would print that warning, but more importantly, each
invocation of 'guix substitute' would print it, even though
'guix-daemon.service' explicitly chooses "en_US.utf8", which is in
'glibc-utf8-locales'.  This leads to confusion since users would keep
seeing this message unless/until they realize they also need to install
'glibc-utf8-locales' in root's profile.

This patch gets rid of "guile: warning: ..." for a guix-pulled 'guix'
command.

* guix/self.scm (specification->package): Add "gcc-toolchain".
(quiet-guile): New procedure.
(guix-command): Use it.
* gnu/packages/aux-files/guile-launcher.c: New file.
* Makefile.am (AUX_FILES): Add it.
 2020-10-05 23:19:19 +02:00
Nicolas Goaziou b3417123d1
gnu: rust-time-0.1: Update to 0.1.43. 
* gnu/packages/crates-io.scm (rust-time-0.1): Update to 0.1.43.
 2020-10-05 23:00:20 +02:00
Nicolas Goaziou 788cb3cb3b
gnu: rust-chrono-0.4: Update to 0.4.13. 
* gnu/packages/crates-io.scm (rust-chrono-0.4): Update to 0.4.13.
 2020-10-05 22:37:47 +02:00
Nicolas Goaziou 7121ec8c9d
gnu: rust-base64-0: Update to 0.12.3. 
* gnu/packages/crates-io.scm (rust-base64-0): Update to 0.12.3.
 2020-10-05 22:18:28 +02:00
Tobias Geerinckx-Rice d6a0dbd6dc
gnu: swaks: Support IPv6. 
* gnu/packages/mail.scm (swaks)[inputs]: Add perl-io-socket-inet6 and
perl-socket6.
 2020-10-05 21:49:59 +02:00
Jan (janneke) Nieuwenhuizen dc8b4c5448
gnu: guix: Update to 1.1.0-29.4e3ed9bad9. 
* gnu/packages/package-management.scm (guix): Update to 1.1.0-29.4e3ed9bad9.
 2020-10-05 20:25:26 +02:00
Julien Lepiller 4e3ed9bad9
services: gitolite: Install the rc file as gitolite's user. 
* gnu/services/version-control.scm (gitolite-activation): Install the rc
file as gitolite's user.
 2020-10-05 19:41:23 +02:00
Christopher Baines c14714cbbf
services: guix: Add guix-build-coordinator-queue-builds-service-type. 
* gnu/services/guix.scm (<guix-build-coordinator-queue-builds-configuration>):
New record type.
(guix-build-coordinator-queue-builds-configuration,
guix-build-coordinator-queue-builds-configuration?,
guix-build-coordinator-queue-builds-configuration-package,
guix-build-coordinator-queue-builds-configuration-user,
guix-build-coordinator-queue-builds-coordinator,
guix-build-coordinator-queue-builds-configuration-systems,
guix-build-coordinator-queue-builds-configuration-system-and-targets,
guix-build-coordinator-queue-builds-configuration-guix-data-service,
guix-build-coordinator-queue-builds-configuration-processed-commits-file,
guix-build-coordinator-queue-builds-shepherd-services,
guix-build-coordinator-queue-builds-activation,
guix-build-coordinator-queue-builds-account): New procedures.
(guix-build-coordinator-queue-builds-service-type): New variable.
* doc/guix.texi (Guix Services): Document it.
 2020-10-05 18:10:48 +01:00
Christopher Baines 98ab323a24
services: guix: Add guix-build-coordinator-agent-service-type. 
* gnu/services/guix.scm (<guix-build-coordinator-agent-configuration>): New
record type.
(guix-build-coordinator-agent-configuration,
guix-build-coordinator-agent-configuration?,
guix-build-coordinator-agent-configuration-package,
guix-build-coordinator-agent-configuration-user,
guix-build-coordinator-agent-configuration-coordinator,
guix-build-coordinator-agent-configuration-uuid),
guix-build-coordinator-agent-configuration-password,
guix-build-coordinator-agent-configuration-password-file,
guix-build-coordinator-agent-configuration-systems,
guix-build-coordinator-agent-configuration-max-parallel-builds,
guix-build-coordinator-agent-configuration-derivation-substitute-urls,
guix-build-coordinator-agent-configuration-non-derivation-substitute-urls,
guix-build-coordinator-agent-shepherd-services,
guix-build-coordinator-agent-activation,
guix-build-coordinator-agent-account): New procedures.
(guix-build-coordinator-agent-service-type): New variable.
* doc/guix.texi (Guix Services): Document it.
 2020-10-05 18:10:48 +01:00