402f256f81
gnu: texlive-latex-xkeyval -> texlive-xkeyval.
...
* gnu/packages/tex.scm (texlive-xkeyval): New variable.
(texlive-latex-xkeyval): Deprecate variable.
(texlive-bidi):
(texlive-pstool):
(texlive-polyglossia):
(texlive-zref):
(texlive-standalone):
(texlive-todonotes):
(texlive-adjustbox):
(texlive-qrcode):
(texlive-breakurl):
* gnu/packages/graphviz.scm (dot2tex):
* gnu/packages/statistics.scm (r-with-tests): Use new name.
2023-07-18 18:10:48 +02:00
76819a9655
gnu: texlive-fonts-ec -> texlive-ec.
...
* gnu/packages/tex.scm (texlive-ec): New variable.
(texlive-fonts-ec): Deprecate variable.
(lyx):
(biber):
* gnu/packages/python-xyz.scm (python-pypandoc):
* gnu/packages/statistics.scm (r-with-tests):
* doc/build.scm (pdf-manual):
* gnu/packages/bioinformatics.scm (discrover):
(phyml):
(velvet):
* gnu/packages/chemistry.scm (yaehmop):
* gnu/packages/chez.scm (stex-bootstrap):
* gnu/packages/ocaml.scm (unison):
(ocaml-bibtex2html):
* gnu/packages/plotutils.scm (asymptote): Use new name.
2023-07-18 18:10:48 +02:00
9550a20361
gnu: texlive-latex-upquote -> texlive-upquote.
...
* gnu/packages/tex.scm (texlive-upquote): New variable.
(texlive-latex-upquote): Deprecate variable.
* gnu/packages/cran.scm (r-prereg):
* gnu/packages/maths.scm (hypre):
* gnu/packages/python-xyz.scm (python-nbconvert):
* gnu/packages/sphinx.scm (python-sphinx):
* gnu/packages/statistics.scm (r-with-tests): Use new name.
2023-07-18 18:10:46 +02:00
ed58e991f5
gnu: r-puniform: Update to 0.2.6.
...
* gnu/packages/statistics.scm (r-puniform): Update to 0.2.6.
2023-07-17 14:19:54 +02:00
a450a5aafa
gnu: r-clubsandwich: Update to 0.5.9.
...
* gnu/packages/statistics.scm (r-clubsandwich): Update to 0.5.9.
2023-07-17 14:19:54 +02:00
7d6bdd1c8a
gnu: r-matrixmodels: Update to 0.5-2.
...
* gnu/packages/statistics.scm (r-matrixmodels): Update to 0.5-2.
2023-07-17 14:19:54 +02:00
b5fede2809
gnu: r-deoptimr: Update to 1.1-0.
...
* gnu/packages/statistics.scm (r-deoptimr): Update to 1.1-0.
2023-07-17 14:19:54 +02:00
f96c109be9
gnu: r-mgcv: Update to 1.9-0.
...
* gnu/packages/statistics.scm (r-mgcv): Update to 1.9-0.
2023-07-17 14:19:53 +02:00
af6b542954
gnu: r-openssl: Update to 2.1.0.
...
* gnu/packages/statistics.scm (r-openssl): Update to 2.1.0.
[properties]: Add hint to keep openssl input.
[inputs]: Add zlib.
2023-07-17 14:18:43 +02:00
8d2a016f1b
gnu: r-with-tests: Update to 4.3.1.
...
* gnu/packages/statistics.scm (r-with-tests): Update to 4.3.1.
2023-07-16 10:48:00 +02:00
ff0d34a29b
gnu: r-with-tests: Fix reference to grep.
...
detectCores.R fails to return the number of cores when running R in a
container without grep.
Reported-by: Jonas Freimuth.
* gnu/packages/statistics.scm (r-with-tests)[arguments]: Fix references to
grep and wc in detectCores.R.
[inputs]: Add grep.
2023-07-16 10:48:00 +02:00
ee50cae529
gnu: r-norm: Update to 1.0-11.1.
...
* gnu/packages/statistics.scm (r-norm): Update to 1.0-11.1.
2023-07-12 14:29:09 +02:00
c141725c65
gnu: r-logspline: Update to 2.1.20.
...
* gnu/packages/statistics.scm (r-logspline): Update to 2.1.20.
2023-07-12 14:29:09 +02:00
5a1c16fa18
gnu: r-pbapply: Update to 1.7-2.
...
* gnu/packages/statistics.scm (r-pbapply): Update to 1.7-2.
2023-07-12 14:29:09 +02:00
42c29d9d22
gnu: r-robust: Update to 0.7-2.
...
* gnu/packages/statistics.scm (r-robust): Update to 0.7-2.
2023-07-12 14:29:09 +02:00
2108aa1975
gnu: r-rrcov: Update to 1.7-4.
...
* gnu/packages/statistics.scm (r-rrcov): Update to 1.7-4.
2023-07-12 14:29:09 +02:00
387c1fafce
gnu: r-robustbase: Update to 0.99-0.
...
* gnu/packages/statistics.scm (r-robustbase): Update to 0.99-0.
2023-07-12 14:29:08 +02:00
86c7032abf
gnu: r-deoptimr: Update to 1.0-14.
...
* gnu/packages/statistics.scm (r-deoptimr): Update to 1.0-14.
2023-07-12 14:29:08 +02:00
f9dc378cb4
gnu: r-mvtnorm: Update to 1.2-2.
...
* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.2-2.
2023-07-12 14:29:08 +02:00
e8ef13993e
gnu: r-rmarkdown: Update to 2.23.
...
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.23.
2023-07-12 14:29:08 +02:00
7cb71cb2fb
gnu: r-rcpparmadillo: Update to 0.12.4.1.0.
...
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.12.4.1.0.
2023-07-12 14:29:08 +02:00
b8112b4600
gnu: r-rstudioapi: Update to 0.15.0.
...
* gnu/packages/statistics.scm (r-rstudioapi): Update to 0.15.0.
2023-07-12 14:29:08 +02:00
c5c0f85b77
gnu: r-xml2: Update to 1.3.5.
...
* gnu/packages/statistics.scm (r-xml2): Update to 1.3.5.
2023-07-12 14:29:08 +02:00
4ec94fe0a9
gnu: r-locfit: Update to 1.5-9.8.
...
* gnu/packages/statistics.scm (r-locfit): Update to 1.5-9.8.
2023-07-12 14:29:08 +02:00
1493844a1e
gnu: r-dbplyr: Update to 2.3.3.
...
* gnu/packages/statistics.scm (r-dbplyr): Update to 2.3.3.
2023-07-12 14:29:08 +02:00
6276fbb64a
gnu: r-testthat: Update to 3.1.10.
...
* gnu/packages/statistics.scm (r-testthat): Update to 3.1.10.
2023-07-12 14:29:08 +02:00
b372435930
gnu: r-matrix: Update to 1.6-0.
...
* gnu/packages/statistics.scm (r-matrix): Update to 1.6-0.
2023-07-12 14:29:08 +02:00
f072cd9486
gnu: r-kernsmooth: Update to 2.23-22.
...
* gnu/packages/statistics.scm (r-kernsmooth): Update to 2.23-22.
2023-07-12 14:29:08 +02:00
1b09d2e9ae
gnu: r-lme4: Update to 1.1-34.
...
* gnu/packages/statistics.scm (r-lme4): Update to 1.1-34.
2023-07-12 14:29:02 +02:00
138d0dd9ad
gnu: r-digest: Update to 0.6.33.
...
* gnu/packages/statistics.scm (r-digest): Update to 0.6.33.
[native-inputs]: Add r-simplermarkdown.
2023-07-12 14:29:02 +02:00
60c70a9009
gnu: r-plotly: Update to 4.10.2.
...
* gnu/packages/statistics.scm (r-plotly): Update to 4.10.2.
2023-07-12 14:29:02 +02:00
8e83db0bce
gnu: python-statsmodels: Update to 0.14.0.
...
* gnu/packages/statistics.scm (python-statsmodels): Update to 0.14.0.
[source]: Simplify snippet.
[build-system]: Use pyproject-build-system.
[arguments]: Remove trailing #T from build phase.
[propagated-inputs]: Add python-packaging; remove python-matplotlib.
[native-inputs]: Add python-colorama, python-flake8, python-isort,
python-joblib, python-matplotlib, python-pytest, python-pytest-randomly,
python-pytest-xdist, and python-setuptools-scm; remove python-nose and
python-sphinx.
2023-07-07 10:13:57 +02:00
c55611ff3f
gnu: Add python-pymc.
...
* gnu/packages/statistics.scm (python-pymc): New variable.
2023-06-25 10:48:07 -03:00
514856e1aa
gnu: Add python-arviz.
...
* gnu/packages/statistics.scm (python-arviz): New variable.
2023-06-25 10:43:22 -03:00
fa214b27cf
gnu: Add python-altair.
...
* gnu/packages/statistics.scm (python-altair): New variable.
2023-06-25 10:43:21 -03:00
64e5e17d8c
gnu: Add python-vega-datasets.
...
* gnu/packages/statistics.scm (python-vega-datasets): New variable.
* gnu/packages/patches/python-vega-datasets-remove-la-riots-code.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Register it.
2023-06-25 10:43:18 -03:00
da71721db1
gnu: r-biased-urn: Update to 2.0.10.
...
* gnu/packages/statistics.scm (r-biased-urn): Update to 2.0.10.
2023-06-03 08:32:03 +02:00
79b52c60e9
gnu: r-matrixstats: Update to 1.0.0.
...
* gnu/packages/statistics.scm (r-matrixstats): Update to 1.0.0.
2023-06-03 08:32:03 +02:00
3f8a983cae
gnu: r-mvtnorm: Update to 1.2-0.
...
* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.2-0.
2023-06-03 08:32:03 +02:00
01d9a691be
gnu: r-rmarkdown: Update to 2.22.
...
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.22.
[properties]: Add hints to the updater.
2023-06-03 08:31:20 +02:00
6ea2e1105a
gnu: r-desctools: Update to 0.99.49.
...
* gnu/packages/statistics.scm (r-desctools): Update to 0.99.49.
[propagated-inputs]: Add r-withr.
2023-05-31 18:19:55 +02:00
df71989159
gnu: r-rrcov: Update to 1.7-3.
...
* gnu/packages/statistics.scm (r-rrcov): Update to 1.7-3.
2023-05-31 18:19:55 +02:00
e2bc0cb1b4
gnu: r-rcpparmadillo: Update to 0.12.4.0.0.
...
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.12.4.0.0.
2023-05-31 18:19:55 +02:00
ecae6c08fb
gnu: r-knitr: Update to 1.43.
...
* gnu/packages/statistics.scm (r-knitr): Update to 1.43.
2023-05-31 18:19:55 +02:00
ef8d938f7b
gnu: r-markdown: Update to 1.7.
...
* gnu/packages/statistics.scm (r-markdown): Update to 1.7.
2023-05-31 18:19:55 +02:00
232b2530b8
gnu: r-matrix: Update to 1.5-4.1.
...
* gnu/packages/statistics.scm (r-matrix): Update to 1.5-4.1.
2023-05-31 18:19:55 +02:00
63c587b80b
gnu: r-dt: Update to 0.28.
...
* gnu/packages/statistics.scm (r-dt): Update to 0.28.
[source]: Update versions and hashes of datatables extensions.
[arguments]: Minify additional plugin sources.
[native-inputs]: Update plugins sources from 1.12.0 to 1.13.4.
2023-05-31 18:19:53 +02:00
1c88229d44
gnu: rmath-standalone: Set timezone variables.
...
These variables are needed by R's configure script.
* gnu/packages/statistics.scm (rmath-standalone)[arguments]: Add 'set-timezone
phase; remove trailing #T from 'chdir phase.
2023-05-14 13:47:11 +02:00
e2c47544a5
gnu: r-deoptimr: Update to 1.0-13.
...
* gnu/packages/statistics.scm (r-deoptimr): Update to 1.0-13.
2023-05-09 15:24:14 +02:00
4141309fcd
gnu: r-gdata: Update to 2.19.0.
...
* gnu/packages/statistics.scm (r-gdata): Update to 2.19.0.
2023-05-09 15:24:14 +02:00
Nicolas Goaziou
Ricardo Wurmus
Vinicius Monego