51dc4a2d70
gnu: r-bsgenome-mmusculus-ucsc-mm9-masked: Use bioconductor-uri.
...
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm9-masked)[source]:
Use bioconductor-uri.
2019-12-04 09:29:26 +01:00
21f6dae73d
gnu: r-bsgenome-mmusculus-ucsc-mm9: Use bioconductor-uri.
...
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm9)[source]:
Use bioconductor-uri.
[arguments]: Enable substitution.
2019-12-04 09:28:54 +01:00
a47646bd05
gnu: r-bsgenome-hsapiens-ucsc-hg19-masked: Use bioconductor-uri.
...
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg19-masked)[source]:
Use bioconductor-uri.
2019-12-04 09:28:34 +01:00
88e7c7db59
gnu: r-bsgenome-hsapiens-1000genomes-hs37d5: Use bioconductor-uri.
...
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-1000genomes-hs37d5)[source]:
Use bioconductor-uri.
[arguments]: Enable substitution.
2019-12-04 09:28:04 +01:00
bf05ece1a2
gnu: r-bsgenome-dmelanogaster-ucsc-dm3-masked: Use bioconductor-uri.
...
* gnu/packages/bioconductor.scm (r-bsgenome-dmelanogaster-ucsc-dm3-masked)[source]:
Use bioconductor-uri.
2019-12-04 09:27:15 +01:00
87073b7ecb
gnu: r-bsgenome-dmelanogaster-ucsc-dm3: Use bioconductor-uri.
...
* gnu/packages/bioconductor.scm (r-bsgenome-dmelanogaster-ucsc-dm3)[source]:
Use bioconductor-uri.
[arguments]: Enable substitution.
2019-12-04 09:26:22 +01:00
149f351f38
gnu: r-bsgenome-dmelanogaster-ucsc-dm6: Use bioconductor-uri.
...
* gnu/packages/bioconductor.scm (r-bsgenome-dmelanogaster-ucsc-dm6)[source]:
Use bioconductor-uri.
[arguments]: Permit substitution.
2019-12-04 09:25:10 +01:00
6998ecba74
gnu: r-bsgenome-celegans-ucsc-ce10: Use bioconductor-uri.
...
* gnu/packages/bioconductor.scm (r-bsgenome-celegans-ucsc-ce10)[source]: Use
bioconductor-uri.
[arguments]: Permit substitution.
2019-12-04 09:24:09 +01:00
19e67f8216
gnu: emacs-olivetti: Update to 1.8.1.
...
* gnu/packages/emacs-xyz.scm (emacs-olivetti): Update to 1.8.1.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-12-04 09:00:38 +01:00
d6445fa690
gnu: emacs-irony-mode: Update to 1.4.0.
...
* gnu/packages/emacs-xyz.scm (emacs-irony-mode): Update to 1.4.0.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-12-04 09:00:31 +01:00
362e5f9408
gnu: emacs-elisp-demos: Update to 2019.12.01.
...
* gnu/packages/emacs-xyz.scm (emacs-elisp-demos): Update to 2019.12.01.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-12-04 09:00:22 +01:00
17f88b9c01
gnu: emacs-doom-modeline: Update to 2.8.0.
...
* gnu/packages/emacs-xyz.scm (emacs-doom-modeline): Update to 2.8.0.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-12-04 08:59:43 +01:00
312ec128af
gnu: python-pandas: Move to (gnu packages python-science).
...
* gnu/packages/python-xyz.scm (python-pandas, python2-pandas): Move from
here...
* gnu/packages/python-science.scm (python-pandas, python2-pandas): ...to here.
* gnu/packages/benchmark.scm, gnu/packages/databases.scm,
gnu/packages/graph.scm, gnu/packages/parallel.scm,
gnu/packages/serialization.scm: Import (gnu packages python-science).
2019-12-04 08:56:36 +01:00
dc3e62a494
gnu: handbrake: Upgrade to 1.3.0.
...
* gnu/packages/patches/handbrake-opt-in-nvenc.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/video.scm (handbrake)[source]: Upgrade to 1.3.0. Remove
patch.
[native-inputs]: Remove cmake and curl.
[inputs]: Add dav1d and numactl.
[arguments]: Add "--disable-nvenc" to configure flags in place of patch.
Adjust "bootstrap" phase in response to upstream changes.
Add "patch-SHELL" and "relax-reqs" phases.
2019-12-03 22:20:22 -06:00
32c06affca
guix-install.sh: Use a deterministic umask.
...
Users with strict umasks (e.g. 0077) would end up with an unreadable
/gnu (mode 0700) and no way to run guix.
Reported by A. <@aaap:matrix.org> on #guix.
* etc/guix-install.sh (main): Set umask before installing anything.
2019-12-04 03:59:04 +01:00
4c16ffd383
gnu: tcc: Add search paths and drop the wrapper.
...
* gnu/packages/c.scm (tcc): Add native search paths.
(tcc-wrapper): Remove variable.
2019-12-03 22:18:08 +01:00
1b6c5e8039
gnu: cmocka: Update to 1.1.5.
...
* gnu/packages/check.scm (cmocka): Update to 1.1.5.
2019-12-03 21:50:04 +01:00
efa45291b7
gnu: girara: Update to 0.3.3.
...
* gnu/packages/gtk.scm (girara): Update to 0.3.3.
2019-12-03 21:50:04 +01:00
741b505307
gnu: libcdio: Update to 2.1.0.
...
* gnu/packages/cdrom.scm (libcdio): Update to 2.1.0.
2019-12-03 21:50:04 +01:00
a344a1af07
gnu: libcdio-paranoia: Update to 10.2+2.0.0.
...
* gnu/packages/cdrom.scm (libcdio-paranoia): Update to 10.2+2.0.0.
2019-12-03 21:50:03 +01:00
6b9ec7b0ef
gnu: libburn: Update to 1.5.2.
...
* gnu/packages/cdrom.scm (libburn): Update to 1.5.2.
2019-12-03 21:50:03 +01:00
dfe11a489b
gnu: r-rsqlite: Update to 2.1.3.
...
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.1.3.
2019-12-03 14:54:20 +01:00
64d576e514
gnu: r-roxygen2: Update to 7.0.2.
...
* gnu/packages/statistics.scm (r-roxygen2): Update to 7.0.2.
2019-12-03 14:54:13 +01:00
3fff4de729
gnu: r-testthat: Update to 2.3.1.
...
* gnu/packages/statistics.scm (r-testthat): Update to 2.3.1.
2019-12-03 14:54:06 +01:00
6a7ac0a829
gnu: r-rspectra: Update to 0.16-0.
...
* gnu/packages/cran.scm (r-rspectra): Update to 0.16-0.
2019-12-03 14:53:59 +01:00
8aab9b98cf
gnu: r-sjplot: Update to 2.8.1.
...
* gnu/packages/cran.scm (r-sjplot): Update to 2.8.1.
2019-12-03 14:53:50 +01:00
de5092bab0
gnu: r-bayesplot: Update to 1.7.1.
...
* gnu/packages/cran.scm (r-bayesplot): Update to 1.7.1.
2019-12-03 14:53:42 +01:00
27c2a6a160
gnu: r-maptools: Update to 0.9-9.
...
* gnu/packages/cran.scm (r-maptools): Update to 0.9-9.
2019-12-03 14:53:30 +01:00
a477a5c357
gnu: r-network: Update to 1.16.0.
...
* gnu/packages/cran.scm (r-network): Update to 1.16.0.
2019-12-03 14:53:22 +01:00
bce0fcae12
gnu: r-dendextend: Update to 1.13.2.
...
* gnu/packages/cran.scm (r-dendextend): Update to 1.13.2.
2019-12-03 14:53:14 +01:00
ea5af6e74b
gnu: r-curl: Update to 4.3.
...
* gnu/packages/cran.scm (r-curl): Update to 4.3.
2019-12-03 14:53:01 +01:00
5635512828
Revert "doc: Fix typo in example."
...
This reverts commit 7b40d59114
2019-12-03 13:15:41 +02:00
dc7e57833e
gnu: jp2a: Downgrade to 1.0.6.
...
* gnu/packages/image.scm (jp2a): Downgrade to 1.0.6.
[source]: Download from Debian's sources.
[inputs]: Add ncurses.
[native-inputs]: Remove autoconf, automake, pkg-config.
2019-12-03 11:09:47 +02:00
d507ec0994
gnu: toot: Make propagated-inputs regular inputs.
...
* gnu/packages/mastodon.scm (toot)[propagated-inputs]: Move all ...
[inputs]: ... here.
2019-12-03 11:00:14 +02:00
324db47147
gnu: toot: Add missing input.
...
* gnu/packages/mastodon.scm (toot)[propagated-inputs]: Add python-urwid.
2019-12-03 10:59:33 +02:00
0576681c79
gnu: emacs-diff-hl: Update to 1.8.7.
...
* gnu/packages/emacs-xyz.scm (emacs-diff-hl): Update to 1.8.7.
2019-12-03 01:52:46 +01:00
8e936351d7
gnu: xlockmore: Update to 5.59.
...
* gnu/packages/xdisorg.scm (xlockmore): Update to 5.59.
2019-12-03 01:52:46 +01:00
d539ca11b3
gnu: exo: Update to 0.12.10.
...
* gnu/packages/xfce.scm (exo): Update to 0.12.10.
2019-12-03 01:52:46 +01:00
378506a964
gnu: sysstat: Update to 12.2.0.
...
* gnu/packages/linux.scm (sysstat): Update to 12.2.0.
2019-12-03 01:52:45 +01:00
30954e61b2
gnu: mtr: Use @acronym{}.
...
* gnu/packages/networking.scm (mtr)[description]: Substitute @acronym
for @dfn.
2019-12-03 01:52:45 +01:00
3f80d7ced2
gnu: mtr: Don't use NAME in source URI.
...
* gnu/packages/networking.scm (mtr)[source]: Hard-code NAME.
2019-12-03 01:52:45 +01:00
a36eba4716
gnu: mtr: Update to 0.93.
...
* gnu/packages/networking.scm (mtr): Update to 0.93.
[native-inputs]: Remove now-unnecessary autoconf.
2019-12-03 01:52:45 +01:00
fc1ca29da3
gnu: microcom: Use HTTPS home page.
...
* gnu/packages/microcom.scm (microcom)[home-page]: Use HTTPS.
2019-12-03 01:52:45 +01:00
d9a746d43d
gnu: microcom: Update to 2017.03.0.
...
* gnu/packages/microcom.scm (microcom): Update to 2017.03.0.
2019-12-03 01:52:45 +01:00
b73a930703
gnu: microcom: Use GIT-FILE-NAME.
...
* gnu/packages/microcom.scm (microcom)[source]: Use GIT-FILE-NAME.
2019-12-03 01:52:45 +01:00
6deab02c78
gnu: less: Update to 551.
...
* gnu/packages/less.scm (less): Update to 551.
2019-12-03 01:52:45 +01:00
4e94744dd9
gnu: less: Add upstream source URI.
...
* gnu/packages/less.scm (less)[source]: Add the author's site.
2019-12-03 01:52:44 +01:00
df76e0524d
gnu: nsd: Update to 4.2.3.
...
* gnu/packages/dns.scm (nsd): Update to 4.2.3.
2019-12-03 01:52:44 +01:00
bc134c77e0
gnu: pugixml: Update to 1.10.
...
* gnu/packages/xml.scm (pugixml): Update to 1.10.
[source]: Remove obsolete patch.
* gnu/packages/patches/pugixml-versioned-libdir.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-12-03 01:52:44 +01:00
51058cb232
gnu: eid-mw: Update to 4.4.23.
...
* gnu/packages/security-token.scm (eid-mw): Update to 4.4.23.
2019-12-03 01:52:44 +01:00
Ricardo Wurmus
Brett Gilio
Eric Bavier
Tobias Geerinckx-Rice
Andreas Enge
Efraim Flashner