9840ec8cab
gnu: Perl: Resolve TODO.
...
* gnu/packages/perl.scm (perl)[inputs]: Add COREUTILS-MINIMAL.
[arguments]: Unconditionally patch /bin/pwd in Cwd.pm. While at it, remove
trailing #t's.
2021-07-23 17:26:44 +02:00
d672c57a77
gnu: coreutils-minimal: Do not build documentation.
...
...and avoid an upcoming circular dependency on Perl.
* gnu/packages/base.scm (coreutils-minimal)[native-inputs]: Empty field.
2021-07-23 17:26:44 +02:00
2a592d43ef
gnu: Perl: Update cross-compilation code.
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* gnu/packages/perl.scm (perl)[native-inputs]: Update "perl-cross" to 1.3.6.
[arguments]: Remove obsolete patch.
* gnu/packages/patches/perl-cross.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2021-07-23 17:26:44 +02:00
b4553b7cad
gnu: Perl: Update to 5.34.0.
...
* gnu/packages/perl.scm (perl): Update to 5.34.0.
2021-07-23 17:26:44 +02:00
9cdb32fd72
gnu: RHash: Update to 1.4.2.
...
* gnu/packages/crypto.scm (rhash): Update to 1.4.2.
2021-07-23 17:26:44 +02:00
c5ba4725de
gnu: RHash: Turn arguments into gexp.
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* gnu/packages/crypto.scm (rhash)[arguments]: Turn into gexp, and use #$OUTPUT
instead of the %OUTPUT variable.
2021-07-23 17:26:44 +02:00
2c6464e48b
gnu: tzdata-for-tests: Update to 2021a.
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* gnu/packages/base.scm (tzdata-for-tests): Update to 2021a.
2021-07-23 17:26:44 +02:00
053677ba3b
gnu: commencement: Decouple python-boot0 from python.
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* gnu/packages/commencement.scm (python-boot0)[arguments]: Do not use
SUBSTITUTE-KEYWORD-ARGUMENTS to make it easier to change Python without a full
bootstrap.
2021-07-23 17:26:44 +02:00
b8a1b697b4
gnu: glibc: Remove obsolete patch.
...
* gnu/packages/base.scm (glibc)[source](patches): Remove
glibc-hidden-visibility-ldconfig.patch.
2021-07-23 17:26:44 +02:00
790a8a8e18
gnu: Python: Remove trailing #t's.
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* gnu/packages/python.scm (python-2.7)[source, arguments]: Remove trailing
#t's.
(wrap-python3)[arguments]: Likewise.
2021-07-23 17:26:44 +02:00
6520aeae30
gnu: Python: Update to 3.9.6.
...
* gnu/packages/python.scm (python-3.9): Update to 3.9.6.
2021-07-23 17:26:44 +02:00
5086a28b3b
gnu: glib-networking: Remove unused input.
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* gnu/packages/gnome.scm (glib-networking)[native-inputs]: Remove INTLTOOL.
Add GETTEXT-MINIMAL.
2021-07-23 17:26:44 +02:00
661d21251e
gnu: gsettings-desktop-schemas: Remove unused input.
...
* gnu/packages/gnome.scm (gsettings-desktop-schemas)[native-inputs]: Remove
INTLTOOL. Add GETTEXT-MINIMAL.
2021-07-23 17:26:43 +02:00
f5f288872c
gnu: gnome-backgrounds: Remove unused input.
...
* gnu/packages/gnome.scm (gnome-backgrounds)[native-inputs]: Remove INTLTOOL.
Add GETTEXT-MINIMAL.
2021-07-23 17:26:43 +02:00
c5dfe6346d
gnu: gamin: Remove unused input.
...
* gnu/packages/gnome.scm (gamin)[native-inputs]: Remove INTLTOOL.
2021-07-23 17:26:43 +02:00
b99f995912
gnu: glib: Remove unused input.
...
* gnu/packages/glib.scm (glib)[native-inputs]: Remove INTLTOOL.
2021-07-23 17:26:43 +02:00
b51bb5bcdc
gnu: gsl: Update to 2.7.
...
* gnu/packages/maths.scm (gsl): Update to 2.7.
[arguments]: Remove trailing #t's.
2021-07-23 17:26:43 +02:00
f94a0ce61f
gnu: gdbm: Update to 1.20.
...
* gnu/packages/dbm.scm (gdbm): Update to 1.20.
2021-07-23 17:26:43 +02:00
fe6ef6738b
gnu: readline: Update to 8.1.1.
...
* gnu/packages/readline.scm (%patch-series-8.1): Add patch 1.
2021-07-23 17:26:43 +02:00
fff2e2d216
gnu: pcre2: Update to 10.37.
...
* gnu/packages/pcre.scm (pcre2): Update to 10.37.
[arguments]: Remove trailing #t.
2021-07-23 17:26:43 +02:00
81d0ac2da6
gnu: pcre: Update to 8.45.
...
* gnu/packages/pcre.scm (pcre): Update to 8.45.
[source](uri): Change to official mirror; remove defunct.
[arguments]: Remove trailing #t.
2021-07-23 17:26:43 +02:00
c4918b54bb
gnu: tmux-themepack: Tweak description.
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* gnu/packages/tmux.scm (tmux-themepack)[description]: Tweak.
2021-07-23 17:02:29 +02:00
efcd669c5a
gnu: tmux-themepack: Update to 1.1.0.
...
* gnu/packages/tmux.scm (tmux-themepack): Update to 1.1.0.
[arguments]: Install only selected files.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-07-23 17:02:29 +02:00
7273b66945
gnu: modules: Avoid FHS file names in 'add.modules'.
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* gnu/packages/package-management.scm (modules)[arguments]: Add
'patch-add-modules' phase.
2021-07-23 17:02:29 +02:00
8bcd920c71
gnu: Add modules.
...
* gnu/packages/package-management.scm (modules): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-07-23 17:02:28 +02:00
1665bb0cec
gnu: hpcguix-web: Update to 0.1.0.
...
* gnu/packages/web.scm (hpcguix-web): Update to 0.1.0.
[arguments]: In 'wrap-program' phase, change "/bin/run" to
"/bin/hpcguix-web".
[inputs]: Add BASH-MINIMAL.
* gnu/services/web.scm (hpcguix-web-shepherd-service): Run
"/bin/hpcguix-web".
2021-07-23 17:02:28 +02:00
b48bc8953d
gnu: pari-gp: Update to 2.13.2.
...
* gnu/packages/algebra.scm (pari-gp): Update to 2.13.2.
2021-07-23 15:28:03 +02:00
3f7efaa54a
gnu: binutils: Update binutils patch for mingw.
...
This allows "./pre-inst-env guix build hello --target=x86_64-w64-mingw32"
to succeed. The binary can be run successfully under wine.
* gnu/packages/patches/binutils-mingw-w64-timestamp.patch:
Update to the current version in Debian.
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2021-07-23 14:36:00 +02:00
4e19ad0fde
gnu: gnome-maps: Update to 3.38.5.
...
* gnu/packages/geo.scm (gnome-maps): Update to 3.38.5.
2021-07-23 12:41:01 +02:00
785c96fbe1
gnu: Add radvd.
...
* gnu/packages/admin.scm (radvd): New variable.
2021-07-23 11:33:36 +02:00
d7942ac12a
packages: Use 'lookup-package-input' and friends instead of 'package-input'.
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* guix/packages.scm (package-input, package-native-input): Remove.
(this-package-input): Use 'lookup-package-input' and
'lookup-package-propagated-input' instead of 'package-input'.
(this-package-native-input): Use 'lookup-package-native-input'
instead of 'package-input'.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-07-23 10:51:57 +02:00
89ea0918a4
gnu: Add drawterm.
...
* gnu/packages/plan9.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2021-07-22 19:52:53 +08:00
d98fc80ffb
gnu: Add cl-libxml2.
...
* gnu/packages/lisp-xyz.scm (cl-libxml2, ecl-cl-libxml2, sbcl-cl-libxml2): New
variables.
2021-07-22 13:03:52 +02:00
aa2686c368
gnu: r-opencpu: Update to 2.2.4.
...
* gnu/packages/cran.scm (r-opencpu): Update to 2.2.4.
2021-07-22 11:37:25 +02:00
9cfa6c3c58
gnu: Add r-opencpu
...
* gnu/packages/cran.scm: (r-opencpu): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2021-07-22 11:37:25 +02:00
2b6dd1bde5
gnu: Add r-protolite
...
* gnu/packages/cran.scm: (r-protolite): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2021-07-22 11:37:25 +02:00
c5baff1796
gnu: Add r-webutils
...
* gnu/packages/cran.scm (r-webutils): New variable.
2021-07-22 11:37:21 +02:00
b05a1eb5e3
gnu: Add python-dolfin-adjoint.
...
* gnu/packages/simulation.scm (python-dolfin-adjoint): New variable.
2021-07-22 10:03:53 +01:00
4c63efa5e3
gnu: Add abjad-ext-ipython.
...
* gnu/packages/music.scm (abjad-ext-ipython): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-07-22 11:50:14 +03:00
ccfcbadd68
gnu: Add abjad-ext-nauert.
...
* gnu/packages/music.scm (abjad-ext-nauert): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-07-22 11:48:45 +03:00
a909460099
gnu: Add abjad-ext-rmakers.
...
* gnu/packages/music.scm (abjad-ext-rmakers): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-07-22 11:48:41 +03:00
454460ca55
gnu: abjad: Remove obsolete phase.
...
* gnu/packages/music.scm (abjad)[arguments]: Remove custom 'patch-source
phase.
2021-07-22 11:14:33 +03:00
91c42e4767
gnu: abjad: Move lilypond to inputs.
...
* gnu/packages/music.scm (abjad)[native-inputs]: Move lilypond ...
[inputs]: ... to here.
2021-07-22 11:13:57 +03:00
18f9e21b18
gnu: abjad: Improve description.
...
* gnu/packages/music.scm (abjad)[description]: Improve abjad's
description.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-07-22 11:06:58 +03:00
dd7c2d2b1d
gnu: abjad: Move python-ply to propagated-inputs.
...
* gnu/packages/music.scm (abjad)[ntaive-inputs]: Move python-ply ...
[propagated-inputs]: ... to here.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-07-22 11:05:41 +03:00
5535d5435e
gnu: python-abjad: Rename to abjad.
...
* gnu/packages/music.scm (abjad): Rename from python-abjad.
(python-abjad): Keep as deprecated package.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-07-22 11:04:10 +03:00
fd8aea010f
gnu: python-pysam: Make the check phase honor the tests? argument.
...
* gnu/packages/bioinformatics.scm (python-pysam)[arguments]: Adjust
custom 'check phase to skip tests when #:tests is #f.
2021-07-22 10:58:22 +03:00
877792a6a7
gnu: python-pysam: Update to 0.16.0.1.
...
* gnu/packages/bioinformatics.scm (python-pysam): Update to 0.16.0.1.
[arguments]: Update custom 'check phase.
[propagated-inputs]: Replace htslib-1.9 with 1.10.
[native-inputs]: Add python-pytest. Replace samtools-1.9 with 1.10,
bcftools-1.9 with 1.10.
(bcftools-1.9): Replace with bcftools-1.10.
[native-inputs]: Replace htslib-1.9 with 1.10.
(samtools-1.9): Replace with samtools-1.10.
[inputs]: Replace htslib-1.9 with 1.10.
2021-07-22 10:57:41 +03:00
cc4906d13b
gnu: Add htslib-1.10.
...
* gnu/packages/bioinformatics.scm (htslib-1.10): New variable.
2021-07-22 10:50:58 +03:00
309b38bed6
gnu: python-biopython: Update to 1.73.
...
* gnu/packages/bioinformatics.scm (python-biopython): Update to 1.73.
2021-07-22 09:14:12 +03:00
Marius Bakke
Ludovic Courtès
Matthew James Kraai
Ludovic Courtès
Ivan Gankevich
Andreas Enge
Maxime Devos
Leo Prikler
Guillaume Le Vaillant
宋文武
Pierre Neidhardt
Ricardo Wurmus
Sharlatan Hellseher
Paul Garlick
jgart
Efraim Flashner