Ricardo Wurmus
9686c828ed
gnu: python-seaborn: Fix build.
...
* gnu/packages/python-xyz.scm (python-seaborn)[source]: Add patch.
[arguments]: Add build phase 'patch-more-tests.
* gnu/packages/patches/python-seaborn-2690.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2022-01-31 16:07:40 +01:00
Ricardo Wurmus
f383aca408
gnu: python-anndata: Update to 0.7.8.
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* gnu/packages/python-xyz.scm (python-anndata): Update to 0.7.8.
[arguments]: Embed the appropriate version string instead of letting it
try (and fail) to discover the correct string at load time.
[propagated-inputs]: Add python-xlrd-1.
2022-01-31 16:07:40 +01:00
Ricardo Wurmus
ad516f4009
gnu: Add python-xlrd-1.
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* gnu/packages/python-xyz.scm (python-xlrd-1): New variable.
2022-01-31 16:07:39 +01:00
Leo Famulari
f3d0ed37ea
gnu: python-black: Document the tomli version requirements.
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* gnu/packages/python-xyz.scm (python-black): Add comment.
2022-01-29 18:29:32 -05:00
Marius Bakke
171084792f
gnu: python-pydantic: Update to 1.9.0.
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* gnu/packages/python-xyz.scm (python-pydantic): Update to 1.9.0.
2022-01-29 12:52:37 +01:00
Petr Hodina
27c1d58d90
gnu: Add wfetch.
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* gnu/packages/python-xyz.scm (wfetch): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-28 23:51:09 +01:00
Petr Hodina
977a6c5769
gnu: Add python-geojson.
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* gnu/packages/python-xyz.scm (python-geojson): New variable.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2022-01-28 23:40:15 +01:00
Nicolas Goaziou
c5f1f8b81e
gnu: Properly deprecate texlive-generic-ulem.
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* gnu/packages/python-xyz.scm (python-nbconvert):
* gnu/packages/maths.scm (hypre): Apply deprecation.
* gnu/packages/tex.scm (texlive-generic-ulem): Fix typo in deprecation
command.
2022-01-28 15:05:01 +01:00
Nicolas Goaziou
2b37ec1c60
gnu: Remove occurrences of deprecated texlive-latex-capt-of.
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* gnu/packages/maths.scm (hypre):
* gnu/packages/python-xyz.scm (python-numpy-documentation):
(python-ipython-documentation): Use texlive-capt-of instead of texlive-latex-capt-of.
2022-01-28 14:37:49 +01:00
Nicolas Goaziou
01107fc4ea
gnu: texlive-latex-enumitem: Deprecate package.
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* gnu/packages/tex.scm (texlive-latex-enumitem): Deprecate in favor of texlive-enumitem.
* gnu/packages/python-xyz.scm (python-matplotlib-documentation):
(python-nbconvert): Apply deprecation.
2022-01-28 14:33:56 +01:00
Danny Milosavljevic
a58bcf927c
gnu: Add python-esprima.
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* gnu/packages/python-xyz.scm (python-esprima): New variable.
2022-01-25 18:47:09 +01:00
Efraim Flashner
8ef0473969
gnu: python-pillow-simd: Update to 9.0.0.
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* gnu/packages/python-xyz.scm (python-pillow-simd): Update to 9.0.0.
[arguments]: Remove field.
2022-01-23 22:24:09 +02:00
Efraim Flashner
ac50b3c29d
gnu: python-pillow: Remove input labels.
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* gnu/packages/python-xyz.scm (python-pillow)[inputs]: Remove labels.
2022-01-23 22:24:09 +02:00
Efraim Flashner
656c7bc805
gnu: python-pillow: Update to 9.0.0 (security fixes).
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* gnu/packages/python-xyz.scm (python-pillow): Update to 9.0.0.
[source]: Add snippet to remove bundled code.
[arguments]: Adjust custom 'check phase.
2022-01-23 22:24:09 +02:00
Efraim Flashner
d7085a3c50
gnu: python-pillow: Add cpe-name.
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* gnu/packages/python-xyz.scm (python-pillow)[properties]: Add cpe-name.
2022-01-23 22:24:06 +02:00
Marius Bakke
567cc4ea38
gnu: Add python-setuptools-rust.
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* gnu/packages/python-xyz.scm (python-setuptools-rust): New variable.
2022-01-23 19:59:09 +01:00
Marius Bakke
e92961a687
gnu: Remove python-typing.
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* gnu/packages/python-xyz.scm (python-typing): Merge with ...
(python2-typing): ... this variable.
2022-01-22 12:42:47 +01:00
Marius Bakke
db501204f3
gnu: python-fs: Remove unused input.
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* gnu/packages/python-xyz.scm (python-fs)[propagated-inputs]: Remove
PYTHON-TYPING.
2022-01-22 12:42:47 +01:00
Marius Bakke
9604bea0ca
gnu: Remove python2-tqdm.
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* gnu/packages/python-xyz.scm (python2-tqdm): Remove variable.
2022-01-22 12:42:47 +01:00
Marius Bakke
b084ab813a
gnu: Remove python2-nltk.
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* gnu/packages/python-xyz.scm (python2-nltk): Remove variable.
2022-01-22 12:42:47 +01:00
Marius Bakke
7ff27f1dde
gnu: python-flufl-bounce: Update to 4.0.
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* gnu/packages/python-xyz.scm (python-flufl-bounce): Update to 4.0.
[arguments]: Replace check phase.
[native-inputs]: Add PYTHON-FLUFL-TESTING.
2022-01-22 12:42:47 +01:00
Marius Bakke
43c11056d2
gnu: python-watchdog: Remove unused input.
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* gnu/packages/python-xyz.scm (python-watchdog)[propagated-inputs]: Remove
PYTHON-ARGH.
2022-01-22 10:23:02 +01:00
Marius Bakke
9f57352e12
gnu: python-tqdm: Update to 4.62.3.
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* gnu/packages/python-xyz.scm (python-tqdm): Update to 4.62.3.
2022-01-22 10:23:00 +01:00
Marius Bakke
8830d9f900
gnu: python-pytest-asyncio: Update to 0.17.2.
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* gnu/packages/check.scm (python-pytest-asyncio): Update to 0.17.2.
[arguments]: Specify setuptools-scm version. Replace check phase.
[native-inputs]: Remove PYTHON-COVERAGE. Add PYTHON-FLAKY and
PYTHON-SETUPTOOLS-SCM.
* gnu/packages/python-xyz.scm (python-tqdm, python-watchgod)[arguments]:
Specify asyncio_mode when running tests.
2022-01-22 10:23:00 +01:00
Marius Bakke
98d9869412
gnu: python-tenacity: Update to 8.0.1.
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* gnu/packages/python-xyz.scm (python-tenacity): Update to 8.0.1.
[propagated-inputs]: Remove.
[native-inputs]: Add PYTHON-TYPEGUARD. Remove PYTHON-SPHINX.
[arguments]: Rewrite in gexp style.
2022-01-22 10:23:00 +01:00
Marius Bakke
aec7c0cb44
gnu: Add python-typeguard.
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* gnu/packages/python-xyz.scm (python-typeguard): New variable.
2022-01-22 10:23:00 +01:00
Marius Bakke
9153e3b872
gnu: python-cython: Add 3.0.0a10.
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* gnu/packages/python-xyz.scm (python-cython-3): New variable.
2022-01-22 10:22:59 +01:00
jgart via Guix-patches via
e22957fc15
gnu: Add nbss-upload.
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* gnu/packages/python-xyz.scm (nbss-upload): New variable.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2022-01-22 12:20:46 +03:00
Nicolas Goaziou
e143654088
gnu: pyzo: Update to 4.12.0.
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* gnu/packages/python-xyz.scm (pyzo): Update to 4.12.0.
[source]: Get source from GitHub since last release is not available on PyPi.
2022-01-21 21:21:03 +01:00
Marius Bakke
2ee870d0ab
gnu: python-fonttools: Fix build failure.
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* gnu/packages/python-xyz.scm (python-fonttools-with-tests)[arguments]: Skip
tests that cannot run.
[native-inputs]: Fix inheritance.
2022-01-19 21:41:13 +01:00
Efraim Flashner
2c9787086a
gnu: python-xdo: Use libc already in build environment.
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* gnu/packages/python-xyz.scm (python-xdo)[arguments]: Find reference to
'libc' input.
[inputs]: Remove glibc.
2022-01-19 16:01:59 +02:00
Lars-Dominik Braun
71421529d8
gnu: python-xdo: Hard-code path to libc.
...
Fixes: <https://issues.guix.gnu.org/53183 >
* gnu/packages/python-xyz.scm (python-xdo)[arguments]: Also substitute*
reference of libc.
[inputs]: Add glibc.
2022-01-19 14:41:38 +01:00
Marius Bakke
312686ac5f
gnu: python-pyzmq: Update to 22.3.0.
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* gnu/packages/python-xyz.scm (python-pyzmq): Update to 22.3.0.
2022-01-19 10:05:30 +01:00
Marius Bakke
9f529627c8
gnu: Add python-roundrobin.
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* gnu/packages/python-xyz.scm (python-roundrobin): New public variable.
2022-01-19 10:05:30 +01:00
Marius Bakke
7b11fd565c
gnu: Add python-retry.
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* gnu/packages/python-xyz.scm (python-retry): New public variable.
2022-01-19 10:05:30 +01:00
Marius Bakke
d98af3f7c1
gnu: python-flufl-testing: Explicitly disable tests.
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* gnu/packages/python-xyz.scm (python-flufl-testing)[arguments]: Add #:tests?.
[native-inputs]: Remove.
2022-01-19 10:05:30 +01:00
Marius Bakke
e31ff150f9
gnu: python-peachpy: Fix build.
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* gnu/packages/python-xyz.scm (python-peachpy)[arguments]: Invoke nosetests
directly.
[native-inputs]: Add PYTHON-SETUPTOOLS.
2022-01-18 19:35:56 +01:00
Marius Bakke
5122848d5b
gnu: python-dulwich: Update to 0.20.30.
...
* gnu/packages/python-xyz.scm (python-dulwich): Update to 0.20.30.
[arguments]: Remove workaround. Patch one more file.
[native-inputs]: Add GNUPG and PYTHON-GPG.
2022-01-18 19:35:55 +01:00
Marius Bakke
206c79df39
gnu: python-parse-type: Update to 0.5.2.
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* gnu/packages/python-xyz.scm (python-parse-type): Update to 0.5.2.
[native-inputs]: Add PYTHON-SETUPTOOLS.
2022-01-18 19:35:55 +01:00
Marius Bakke
02ffe4a4a9
gnu: python-kazoo: Update to 2.8.0.
...
* gnu/packages/python-xyz.scm (python-kazoo): Update to 2.8.0.
2022-01-18 19:35:55 +01:00
Marius Bakke
2a4c271e61
gnu: python-rdflib: Update to 6.1.1.
...
* gnu/packages/rdf.scm (python-rdflib): Update to 6.1.1.
[arguments]: Remove #:tests. Add #:phases.
[native-inputs]: Change from PYTHON-NOSE to PYTHON-PYTEST.
(python-rdflib-5): New variable.
(python2-rdflib): Inherit from PYTHON-RDFLIB-5.
* gnu/packages/python-xyz.scm (python-prov): Change from PYTHON-RDFLIB to
PYTHON-RDFLIB-5.
* gnu/packages/bioinformatics.scm (cwltool): Likewise.
2022-01-18 19:35:55 +01:00
Marius Bakke
146e931523
gnu: python-lazr-delegates: Fix test failure.
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* gnu/packages/python-xyz.scm (python-lazr-delegates)[arguments]: Invoke
'nosetests' directly instead of through setup.py. While at it, respect
'--without-tests'.
2022-01-18 19:35:54 +01:00
Marius Bakke
f5e78d4546
gnu: python-gevent: Update to 21.12.0.
...
* gnu/packages/python-xyz.scm (python-gevent): Update to 21.12.0.
[propagated-inputs]: Simplify. Move PYTHON-OBJGRAPH ...
[native-inputs]: ... here. Remove PYTHON-SIX.
2022-01-18 19:35:54 +01:00
Marius Bakke
93006e5507
gnu: Adjust merge resolution.
...
Commit 276f40fdc3
2022-01-18 19:35:54 +01:00
Maxim Cournoyer
719deaa881
gnu: python-dbusmock: Update to 0.25.0 and reap terminated processes.
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It was reported by abrenon and zimoun in #guix that python-dbusmock would fail
to build on their systems.
* gnu/packages/python-xyz.scm (python-dbusmock)
[imported-modules, modules]: New arguments.
[native-inputs]: Use new style.
[phases]{check}: Override phase to run it via a dumb init that can handle
signals and reap dead processes correctly. This prevents test suite failures
in some cases (though it is still unknown why it was working on some systems
and not on others before the change).
2022-01-18 10:10:27 -05:00
Lars-Dominik Braun
80db7ab65b
gnu: Add python-reedsolo.
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Missing dependency of python-esptool.
* gnu/packages/python-xyz.scm (python-reedsolo): New variable.
2022-01-18 14:19:42 +01:00
Maxim Cournoyer
d849be7b5f
gnu: python-black: Relax tomli version requirement.
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* gnu/packages/python-xyz.scm (python-black)
[phases]{relax-version-requirements}: New phase.
2022-01-17 22:24:04 -05:00
Maxim Cournoyer
f91d1c3019
gnu: python-async-timeout: Update to 4.0.2.
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* gnu/packages/python-xyz.scm (python-async-timeout): Update to 4.0.2.
[home-page]: Remove trailing / to please 'guix lint'.
2022-01-17 22:24:03 -05:00
Maxim Cournoyer
36f6188fc4
gnu: python-pystache: Update to 0.6.0.
...
* gnu/packages/python-xyz.scm (python-pystache): Update to 0.6.0.
2022-01-17 14:40:13 -05:00
Maxim Cournoyer
d54c31923d
gnu: python-simpleeval: Update to 0.9.12.
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* gnu/packages/python-xyz.scm (python-simpleeval): Update to 0.9.12.
2022-01-17 11:53:02 -05:00
