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412 Commits (a27bfb84848cd0c1bc7d864cf1f1592e5504ff4c)

Author SHA1 Message Date
Ricardo Wurmus a27bfb8484
gnu: Add r-cluster.
* gnu/packages/statistics.scm (r-cluster): New variable.
2017-03-17 10:14:00 +01:00
Ricardo Wurmus 7489258751
gnu: Add r-class.
* gnu/packages/statistics.scm (r-class): New variable.
2017-03-17 10:14:00 +01:00
Ricardo Wurmus c7e80a7e0d
gnu: Add r-mass.
* gnu/packages/statistics.scm (r-mass): New variable.
2017-03-17 10:14:00 +01:00
Ricardo Wurmus 8f0069170c
gnu: Add r-boot.
* gnu/packages/statistics.scm (r-boot): New variable.
2017-03-17 10:14:00 +01:00
pjotrp 3288e647e3
gnu: r-hexbin: Update to 1.27.1-1.
The package tarball was updated in place, resulting in a change in the hash
value.  We decided to bump the version to 1.27.1-1 instead of keeping the
version at upstream's 1.27.1.

* gnu/packages/statistics.scm (r-hexbin): Update to 1.27.1-1.
2017-03-13 10:34:00 +01:00
Raoul Jean Pierre Bonnal a5935d1946
gnu: Add r-tsne.
* gnu/packages/bioinformatics.scm (r-tsne): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:07 +10:00
Raoul Jean Pierre Bonnal 02eec38ee1
gnu: Add r-ranger.
* gnu/packages/statistics.scm (r-ranger): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:07 +10:00
Raoul Jean Pierre Bonnal d1906e3147
gnu: Add r-tclust.
* gnu/packages/statistics.scm (r-tclust): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:07 +10:00
Raoul Jean Pierre Bonnal 5a200a24eb
gnu: Add r-sn.
* gnu/packages/statistics.scm (r-sn): New variable.

Co-authored-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:06 +10:00
Raoul Jean Pierre Bonnal 06085b5bc5
gnu: Add r-numderiv.
* gnu/packages/statistics.scm (r-numderiv): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:06 +10:00
Raoul Jean Pierre Bonnal fe68c8a990
gnu: Add r-mnormt.
* gnu/packages/statistics.scm (r-mnormt): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:06 +10:00
Raoul Jean Pierre Bonnal 362ea0dc29
gnu: Add r-rcppprogress.
* gnu/packages/statistics.scm (r-rcppprogress): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:06 +10:00
Raoul Jean Pierre Bonnal aa890f6185
gnu: Add r-caret.
* gnu/packages/statistics.scm (r-caret): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:06 +10:00
Raoul Jean Pierre Bonnal ab2ec643c3
gnu: Add r-car.
* gnu/packages/statistics.scm (r-car): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:06 +10:00
Raoul Jean Pierre Bonnal a3eb8c8191
gnu: Add r-pbkrtest.
* gnu/packages/statistics.scm (r-pbkrtest): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:06 +10:00
Raoul Jean Pierre Bonnal 51fc7d8c31
gnu: Add r-lme4.
* gnu/packages/statistics.scm (r-lme4): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:06 +10:00
Raoul Jean Pierre Bonnal c549864d90
gnu: Add r-nloptr.
* gnu/packages/statistics.scm (r-nloptr): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:06 +10:00
Raoul Jean Pierre Bonnal 49dc1fa5cb
gnu: Add r-quantreg.
* gnu/packages/statistics.scm (r-quantreg): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:06 +10:00
Raoul Jean Pierre Bonnal 545d0789fc
gnu: Add r-matrixmodels.
* gnu/packages/statistics.scm (r-matrixmodels): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:06 +10:00
Raoul Jean Pierre Bonnal aa84100011
gnu: Add r-modelmetrics.
* gnu/packages/statistics.scm (r-modelmetrics): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:06 +10:00
Raoul Jean Pierre Bonnal 21cfad44c1
gnu: Add r-rcppeigen.
* gnu/packages/statistics.scm (r-rcppeigen): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:06 +10:00
Raoul Jean Pierre Bonnal 0392f82fd5
gnu: Add r-minqa.
* gnu/packages/statistics.scm (r-minqa): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:05 +10:00
Raoul Jean Pierre Bonnal e08ad76658
gnu: Add r-fnn.
* gnu/packages/statistics.scm (r-fnn): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 11:55:28 +10:00
Raoul Jean Pierre Bonnal 7711f61450
gnu: Add r-pbapply.
* gnu/packages/statistics.scm (r-pbapply): New variable.

Co-authored-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 11:51:50 +10:00
Raoul Jean Pierre Bonnal d4cebae286
gnu: Add r-vgam.
* gnu/packages/statistics.scm (r-vgam): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 11:47:02 +10:00
Raoul Jean Pierre Bonnal a409e8b52f
gnu: Add r-fpc.
* gnu/packages/statistics.scm (r-fpc): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 10:43:26 +10:00
Raoul Jean Pierre Bonnal 5da4f84f1f
gnu: Add r-trimcluster.
* gnu/packages/statistics.scm (r-trimcluster): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 10:43:26 +10:00
Raoul Jean Pierre Bonnal c0cab38e03
gnu: Add r-robustbase.
* gnu/packages/statistics.scm (r-robustbase): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 10:43:26 +10:00
Raoul Jean Pierre Bonnal cda0720805
gnu: Add r-deoptimr.
* gnu/packages/statistics.scm (r-deoptimr): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 10:43:26 +10:00
Raoul Jean Pierre Bonnal c962816dc4
gnu: Add r-prabclus.
* gnu/packages/statistics.scm (r-prabclus): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 10:43:26 +10:00
Raoul Jean Pierre Bonnal 5638e15475
gnu: Add r-mclust.
* gnu/packages/statistics.scm (r-mclust): New variable.

Co-authored-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 10:43:25 +10:00
Raoul Jean Pierre Bonnal a1f2668e6c
gnu: Add r-flexmix.
* gnu/packages/statistics.scm (r-flexmix): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 10:43:25 +10:00
Raoul Jean Pierre Bonnal 1721fb4fe7
gnu: Add r-modeltools.
* gnu/packages/statistics.scm (r-modeltools): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 10:43:25 +10:00
Raoul Jean Pierre Bonnal d5eca4f9ac
gnu: Add r-diptest.
* gnu/packages/statistics.scm (r-diptest): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 10:43:25 +10:00
Ricardo Wurmus f2ac937924
gnu: r: Remove obsolete configure flags.
* gnu/packages/statistics.scm (r)[arguments]: Remove obsolete configure flags.
2017-03-09 07:38:24 +01:00
Ricardo Wurmus f7db12022c
gnu: r: Update to 3.3.3.
* gnu/packages/statistics.scm (r): Update to 3.3.3.
2017-03-09 07:38:24 +01:00
Ricardo Wurmus beaa026aa7
gnu: r: Fix more reproducibility problems.
* gnu/packages/statistics.scm (r)[arguments]: Patch locations in the
build system that need special treatment for reproducibility.
2017-03-08 12:32:49 +01:00
Ricardo Wurmus 745c687be3
gnu: r: Fix syntax for INSTALL_OPTS.
This is a follow-up to commit 4621acfd82.

* gnu/packages/statistics.scm (r)[arguments]: Ensure that
"--built-timestamp" appears on the same line as the other INSTALL_OPTS.
2017-03-08 12:32:49 +01:00
Marius Bakke 6cb7477699
gnu: python-statsmodels: Update to 0.8.0.
* gnu/packages/statistics.scm (python-statsmodels, python2-statsmodels):
Update to 0.8.0.
[source]: Use 'pypi-uri'.
[arguments]: Add more files to matplotlib backend substitution.
* gnu/packages/patches/python-statsmodels-fix-tests.patch: Drop test that
fails with numpy 1.12. Remove previous contents.
2017-03-06 23:24:11 +01:00
Tobias Geerinckx-Rice 9c53993fb2
gnu: r-gtable: Remove duplicate definition.
* gnu/packages/statistics.scm (r-gtable): Remove shadowed 0.1.2 version.
[home-page]: Use HTTPS.
[synopsis, description]: Use those of the removed version.
2017-03-03 00:59:30 +01:00
Tobias Geerinckx-Rice fe08b1a759
gnu: r-codetools: Remove duplicate definition.
* gnu/packages/statistics.scm (r-codetools): Remove shadowed 0.2-14 version.
[home-page]: Use HTTPS.
2017-03-03 00:59:30 +01:00
Ricardo Wurmus 4621acfd82
gnu: r: Build default packages reproducibly.
This is a follow-up to commit de643f0c15.

* gnu/packages/statistics.scm (r)[arguments]: Set the built timestamp for core
packages to the epoch; add phase "build-recommended-packages-reproducibly".
2017-02-07 20:04:49 +01:00
Raoul Jean Pierre Bonnal c6dced88f2
gnu: Add r-rann.
* gnu/packages/statistics.scm (r-rann): New variable.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2017-02-03 14:21:22 -05:00
Raoul Jean Pierre Bonnal 37337699d7
gnu: Add r-randomforest.
* gnu/packages/statistics.scm (r-randomforest): New variable.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2017-02-03 14:12:51 -05:00
Ben Woodcroft e4b6c565be
gnu: r-ggplot2: Add r-svglite to propagated-inputs.
* gnu/packages/statistics.scm (r-ggplot2)[propagated-inputs]: Add
r-svglite.
2017-01-23 21:23:33 +10:00
Raoul Jean Pierre Bonnal e431eb670d
gnu: Add r-fastica.
* gnu/packages/statistics.scm (r-fastica): New variable.
2017-01-20 15:38:03 +01:00
Raoul Jean Pierre Bonnal 793f2edbbc
gnu: Add r-lars.
* gnu/packages/statistics.scm (r-lars): New variable.
2017-01-20 15:38:03 +01:00
Raoul Jean Pierre Bonnal efba686c80
gnu: Add r-mixtools.
* gnu/packages/statistics.scm (r-mixtools): New variable.
2017-01-20 15:38:03 +01:00
Raoul Jean Pierre Bonnal c6017f7222
gnu: Add r-cowplot.
* gnu/packages/statistics.scm (r-cowplot): New variable.
2017-01-20 15:38:02 +01:00
Ricardo Wurmus 26a281ef27
gnu: Add r-compquadform.
* gnu/packages/statistics.scm (r-compquadform): New variable.
2017-01-17 21:46:48 +01:00