This is a follow-up to f02f8db381.
* gnu/packages/crates-io.scm (rust-parking-lot-0.11)[arguments]: In
cargo-development-inputs replace rust-rand-0.7 with 0.8.
This is a follow-up to d16298196c.
* gnu/packages/crates-io.scm (rust-parking-lot-core-0.8)[arguments]: In
cargo-inputs replace rust-cfg-if-0.1 with 1, rust-redox-syscall-0.1 with
0.2, rust-thread-id-3 with 4. Remove rust-cloudabi-0.1.
[[PGP Signed Part:No public key for 2208D20958C1DEB0 created at 2022-05-05T09:12:05+0200 using RSA]]
* gnu/packages/emacs-xyz.scm (emacs-modus-themes): Update to 2.3.3.
* gnu/packages/emacs-xyz.scm (emacs-modus-themes)[source]: Change repository.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Fixes a build failure introduced in
bec6bf64bc.
* gnu/packages/crates-io.scm (rust-instant-0.1)[arguments]: Adjust
inputs as per "guix import crate rust@0.1.9".
* gnu/packages/python-xyz.scm (python-numpy-next): Update to 1.22.3.
[native-inputs]: Replace python-hypothesis with python-hypothesis-6.23.
* gnu/packages/python-xyz.scm (python-numpy-1.20)[native-inputs]:
Explicitly set native-inputs to prevent it to inherit the modified
native-inputs from python-numpy-next, which would result in > 2000
package rebuilds.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Setting the absolute path to pkg-config is required to support
cross-compilation.
* gnu/packages/bioinformatics.scm (vcflib)[arguments]: Set
PKG_CONFIG_EXECUTABLE in #:configure-flags.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu/packages/bioinformatics.scm (vcflib)[arguments]: In the
unpack-submodule-sources phase, look for submodule sources in both inputs and
native-inputs.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu/packages/bioinformatics.scm (vcflib)[source, arguments]: Rewrite using
G-expressions.
[arguments]: Do not return #t from custom phases.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu/packages/bioinformatics.scm (fastahack)[arguments]: Set CXX in
#:make-flags. In the build-dynamic phase, use cxx-for-target instead of g++.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu/packages/bioinformatics.scm (fastahack)[arguments]: Rewrite
using G-expressions. Do not return #t from custom phases.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
tabixpp links to libbz2 from bzip2 and liblzma from xz. Therefore, bzip2 and
xz should be listed in inputs even though they are already present implicitly
in native-inputs. Else, cross-compilation will fail.
* gnu/packages/bioinformatics.scm (tabixpp)[inputs]: Add bzip2 and xz.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu/packages/bioinformatics.scm (tabixpp)[arguments]: Set CC and CXX in
#:make-flags. In the build-libraries phase, use cxx-for-target instead of g++
and ar-for-target instead of ar.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu/packages/bioinformatics.scm (tabixpp)[arguments]: Do not override the
build phase. Move the required make arguments to #:make-flags. Add
build-libraries phase.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
Tobias Geerinckx-Rice
Stephen Paul Weber
Efraim Flashner
Arun Isaac
Andrew Tropin
Ludovic Courtès
Danny Milosavljevic
Felix Gruber
Attila Lendvai
Greg Hogan
Peter Polidoro
Denis 'GNUtoo' Carikli
Adam Kandur