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Author SHA1 Message Date
Morgan Smith d47d50d5a4
gnu: guile-studio: Add missing input. 
* gnu/packages/guile-xyz.scm (guile-studio)[inputs]:
Add emacs-geiser-guile.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-05-01 15:56:42 +02:00
Morgan Smith 0bc6708f68
gnu: emacs-flycheck-guile: Add missing input. 
* gnu/packages/emacs-xyz.scm (emacs-flycheck-guile)[propagated-inputs]:
Add emacs-geiser-guile.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-05-01 15:56:42 +02:00
Morgan Smith 57681f1640
gnu: emacs-guix: Update to 0.5.2-4.8ce6d21. 
* gnu/packages/emacs-xyz.scm (emacs-guix): Update to 0.5.2-4.8ce6d21.
[source]: Update upstream URL.
[propagated-inputs]: Add emacs-geiser-guile.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-05-01 15:56:41 +02:00
Morgan Smith 7141b010ee
gnu: Add emacs-geiser-guile. 
* gnu/packages/patches/emacs-geiser-guile-auto-activate.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it here.
* gnu/packages/emacs-xyz.scm (emacs-geiser-guile): New variable.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-05-01 15:56:41 +02:00
Morgan Smith c1a78a1081
gnu: emacs-geiser: Update to 0.13. 
* gnu/packages/patches/emacs-geiser-autoload-activate-implementation.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it here.
* gnu/packages/emacs-xyz.scm (emacs-geiser): Update to 0.13.
[source]: Change upstream URL.
[build-system]: Change to emacs-build-system.
[arguments]: Adjust accordingly.
[native-inputs]: Remove emacs, autoconf, and automake.
[description]: State that other packages are needed for geiser to be useful.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-05-01 15:56:41 +02:00
Leo Prikler 9c5f9f067e
gnu: emacs-realgud: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-realgud)[fix-autogen-script]: Move after
‘expand-load-path’.
 2021-05-01 15:56:41 +02:00
Leo Prikler 9184d0178d
gnu: emacs-pyim: Update to 3.6. 
* gnu/packages/emacs-xyz.scm (emacs-pyim): Update to 3.6.
 2021-05-01 15:56:41 +02:00
Leo Prikler b8c9d9dee3
gnu: notmuch: Adjust to changes in emacs-build-system. 
* gnu/packages/mail.scm (notmuch)[configure]: Use elpa-directory.
 2021-05-01 15:56:40 +02:00
Leo Prikler cd35b94e30
gnu: emacs-vterm: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-vterm)[substitute-vterm-module-path]:
Move after ‘unpack’.
 2021-05-01 15:56:40 +02:00
Leo Prikler 8e8a3b0eef
gnu: emacs-scel: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-scel)[#:phases]<configure>: Use
elpa-directory.
<add-el-dir-to-emacs-load-path>: Adjust location.
 2021-05-01 15:56:40 +02:00
Leo Prikler c409cea2d8
gnu: emacs-edbi: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-edbi)[patch-path]: Execute after unpack.
[wrap-edbi-bridge]: New phase (after wrap).  Find edbi-bridge in elpa-directory.
 2021-05-01 15:56:40 +02:00
Leo Prikler c4fac5dd7f
gnu: emacs-org-contrib: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-org-contrib)[delete-org-files]: Excurse
into elpa-directory.
 2021-05-01 15:56:40 +02:00
Leo Prikler 08d6f7fad9
gnu: emacs-sly-stepper: Remove generated sources. 
* gnu/packages/emacs-xyz.scm (sly-stepper)[source]: Add snippet to remove
autoloads.
[#:phases]: Do not delete ‘make-autoloads’ or ‘enable-autoloads-compilation’.
 2021-05-01 15:56:39 +02:00
Leo Prikler 2c010c1ba0
gnu: emacs-sly-stepper: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-sly-stepper)[#:phases]:
<add-contrib-to-emacs-load-path>: Rename to...
<expand-sly-contrib>: ... this.  Use find-files to find contrib directory.
<install>: Find slynk-stepper.lisp in elpa-directory.
 2021-05-01 15:56:39 +02:00
Leo Prikler 93d0124a09
gnu: emacs-shroud: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-shroud)[#:phases]: Add ‘expand-load-path’.
[#:configure-flags]: Use elpa-directory for lispdir.
 2021-05-01 15:56:39 +02:00
Xinglu Chen 710cdcc9ce
gnu: emacs-pdf-tools: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-pdf-tools)[#:phases]: Rename
'emacs-add-source-to-load-path' to 'emacs-expand-load-path'.
Use expand-load-path, which replaces add-source-to-load-path.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-05-01 15:56:39 +02:00
Leo Prikler d34e6dbc4b
gnu: emacs-ert-runner: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-ert-runner)[install-executable]: Use
elpa-directory for the value of ERT_RUNNER.
 2021-05-01 15:56:39 +02:00
Leo Prikler d303a0bc2f
gnu: emacs-howm: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-howm)[#:configure-flags]: Install to
elpa-directory.
 2021-05-01 15:56:38 +02:00
Leo Prikler 710c6f49db
gnu: emacs-emacsql: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-emacsql)[#:phases]: Use standard build and
install phases.
[build-emacsql-sqlite]: Use cc-for-target.
 2021-05-01 15:56:38 +02:00
Leo Prikler 7549981cec
gnu: Add emacs-telega-contrib. 
* gnu/packages/emacs-xyz.scm (emacs-telega-contrib): New variable.
 2021-05-01 15:56:38 +02:00
Leo Prikler 132560821c
gnu: emacs-telega: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-telega.scm (emacs-telega)[#:phases]: Reorder.
<telega-paths-patch>: Rename to...
<patch-sources>: ... this.  Also don't patch paths to subdirs.
Remove the snippet, that would push contrib to the load path.
<server-suite-patch>: Rename to...
<patch-test-suite>: ... this.
<emacs-install>: Also install etc.
<emacs-bytecomp-contrib, telega-install-contrib, telega-install-data>: Removed
phases.
 2021-05-01 15:56:38 +02:00
Leo Prikler f974455708
gnu: emacs-guix: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-guix)[#:phases]: Add expand-load-path.
[#:configure-flags]: Install to elpa-directory.
 2021-05-01 15:56:38 +02:00
Leo Prikler 89718b95a0
gnu: emacs-libgit: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-libgit)[set-libgit--module-file]: Use
elpa-directory for libgit--module-file path.
 2021-05-01 15:56:37 +02:00
Leo Prikler d13b46fae4
gnu: emacs: Add coreutils and gzip to PATH. 
Some parts of Emacs (dired, compression handling, Tramp) shell out to commands
and patching them all is a daunting task.  Also, w.r.t. Tramp, we need those
commands to be portable across multiple machines, which need not only be Guix
machines (and even if they are, store items can be different).  This patch
ensures a ‘sane’ setup FSVO ‘sane’.

* gnu/packages/emacs.scm (emacs)[wrap-load-path]: Rename to...
[wrap-emacs-paths] ... this.  Also patch PATH.
 2021-05-01 15:56:37 +02:00
Leo Prikler 307a2d2e2a
gnu: emacs: Wrap EMACSLOADPATH. 
With this, the search path specification of EMACSLOADPATH does no longer
depend on the version of Emacs, which should make upgrading major versions
less painful.  See also:
- <https://bugs.gnu.org/43627>
- <https://bugs.gnu.org/47458>

* gnu/packages/emacs.scm (emacs)[#:phases]: Add ‘wrap-load-path’.
[native-search-path]<EMACSLOADPATH>: Do not search for builtin libraries.
(emacs-next)[native-search-path]: Inherit from emacs.
 2021-05-01 15:56:37 +02:00
Pierre Neidhardt c04dfb39f6
gnu: sbcl: Update to 2.1.4. 
* gnu/packages/lisp.scm (sbcl): Update to 2.1.4.
 2021-05-01 13:53:09 +02:00
Tobias Geerinckx-Rice 1ba3df1872
gnu: soci: Update to 4.0.2. 
* gnu/packages/databases.scm (soci): Update to 4.0.2.
 2021-05-01 11:29:12 +02:00
Tobias Geerinckx-Rice 927fcf1205
gnu: qutebrowser: Update to 2.2.1. 
* gnu/packages/web-browsers.scm (qutebrowser): Update to 2.2.1.
 2021-05-01 11:29:12 +02:00
Tobias Geerinckx-Rice 2a75ec2863
gnu: httpd: Update to 2.4.47. 
* gnu/packages/web.scm (httpd): Update to 2.4.47.
 2021-05-01 11:29:11 +02:00
Tobias Geerinckx-Rice 9b74cfd161
gnu: php: Update to 7.4.18. 
* gnu/packages/php.scm (php): Update to 7.4.18.
[arguments]: Delete yet another failing test (proc_nice_basic).
 2021-05-01 11:29:11 +02:00
Tobias Geerinckx-Rice 51eb82aad9
gnu: khal: Update to 0.10.3. 
* gnu/packages/calendar.scm (khal): Update to 0.10.3.
 2021-05-01 11:29:11 +02:00
Tobias Geerinckx-Rice 122fd940da
gnu: diffoscope: Update to 173. 
* gnu/packages/diffoscope.scm (diffoscope): Update to 173.
 2021-05-01 11:29:11 +02:00
Tobias Geerinckx-Rice 81450d6972
gnu: mailcap: Update to 2.1.53. 
* gnu/packages/mail.scm (mailcap): Update to 2.1.53.
 2021-05-01 11:29:10 +02:00
Tobias Geerinckx-Rice 9fdee1e947
gnu: srt: Update to 1.4.3. 
* gnu/packages/networking.scm (srt): Update to 1.4.3.
 2021-05-01 11:29:10 +02:00
Tobias Geerinckx-Rice ad35e2f8ec
gnu: ustr: Omit static libraries. 
* gnu/packages/textutils.scm (ustr)[arguments]: Add a new
'omit-static-libraries phase.
 2021-05-01 11:29:10 +02:00
Nicolas Goaziou 73b6660cd1
gnu: emacs-marginalia: Update to 0.5. 
* gnu/packages/emacs-xyz.scm (emacs-marginalia): Update to 0.5.
 2021-04-30 21:11:57 +02:00
Nicolas Goaziou fc2df097f3
gnu: emacs-consult: Update to 0.7. 
* gnu/packages/emacs-xyz.scm (emacs-consult): Update to 0.7.
 2021-04-30 21:11:27 +02:00
Oleg Pykhalov 3036bbe1c8
gnu: emacs-which-key: Update to 3.5.2. 
* gnu/packages/emacs-xyz.scm (emacs-which-key): Update to 3.5.2.
 2021-04-30 20:46:38 +03:00
Roel Janssen f09e4dd8ea
gnu: Add pbgzip. 
* gnu/packages/bioinformatics.scm (pbgzip): New variable.
 2021-04-30 18:44:46 +02:00
Ludovic Courtès 5866fa558b
Merge branch 'wip-ungrafting' 2021-04-30 18:21:31 +02:00
Brendan Tildesley ed9d890e0e
gnu: xfce4-settings: Add gsettings-desktop-schemas. 
* gnu/packages/xfce.scm (xfce4-settings):[propagated-inputs]: Add
gsettings-desktop-schemas. This makes it appear in the system profile
via the xfce service. This fixes a bug where changing icon theme causes
xfce4-appearance-settings to crash with the error:

GLib-GIO-ERROR **: 15:41:45.828: Settings schema 'org.gnome.desktop.interface' is not installed
Trace/breakpoint trap

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-04-30 17:37:45 +02:00
Xinglu Chen 953e7d84ce
gnu: emacs-xref: Fix ELPA URL. 
* gnu/packages/emacs-xyz.scm (emacs-xref)[source]: Use “.tar” instead of “.el”
in the URL.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-04-30 16:47:31 +02:00
Raghav Gururajan ee86a035c7
gnu: libsoup: Update home-page. 
* gnu/packages/gnome.scm (libsoup)[home-page]: Modify.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-04-30 16:12:41 +02:00
Raghav Gururajan 2fd6484ad3
gnu: libsoup: Adjust inputs. 
* gnu/packages/gnome.scm (libsoup)[inputs]: Add samba and
move glib-networking to ...
[propagated-inputs]: ... here.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-04-30 16:12:41 +02:00
Nicolas Goaziou d5fdd88739
gnu: emacs-xref: Update to 1.1.0. 
* gnu/packages/emacs-xyz.scm (emacs-xref): Update to 1.1.0.
 2021-04-30 16:01:55 +02:00
Nicolas Goaziou d3bed700a2
gnu: emacs-tramp: Update to 2.5.0.4. 
* gnu/packages/emacs-xyz.scm (emacs-tramp): Update to 2.5.0.4.
 2021-04-30 16:01:46 +02:00
Nicolas Goaziou 2130a43874
gnu: emacs-auctex: Update to 13.0.11. 
* gnu/packages/emacs-xyz.scm (emacs-auctex): Update to 13.0.11.
 2021-04-30 16:01:39 +02:00
Nicolas Goaziou 5511a5b662
gnu: emacs-project: Update to 0.6.0. 
* gnu/packages/emacs-xyz.scm (emacs-project): Update to 0.6.0.
 2021-04-30 16:01:30 +02:00
Sergiu Ivanov 847f523381
gnu: Add aspell-dict-ro. 
* gnu/packages/aspell.scm (aspell-dict-ro): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2021-04-30 12:51:40 +02:00
Sharlatan Hellseher 91ba42509e
gnu: Add cl-bknr-datastore. 
* gnu/packages/lisp-xyz.scm (cl-bknr-datastore, sbcl-bknr-datastore): New
  variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-04-30 09:42:07 +02:00
Sharlatan Hellseher c72c3e50cd
gnu: Add cl-unit-test. 
* gnu/packages/lisp-xyz.scm (cl-unit-test, ecl-unit-test, sbcl-unit-test): New
  variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-04-30 09:16:22 +02:00
Efraim Flashner 131265ea3a
gnu: vim-fugitive: Update to 3.3. 
* gnu/packages/vim.scm (vim-fugitive): Update to 3.3.
 2021-04-29 23:22:48 +03:00
Efraim Flashner 59dbf6e190
gnu: vim-asyncrun: Update to 2.8.6. 
* gnu/packages/vim.scm (vim-asyncrun): Update to 2.8.6.
 2021-04-29 23:19:48 +03:00
Oleg Pykhalov ed1e011dd5
gnu: emacs-elfeed: Update to 3.4.1. 
* gnu/packages/emacs-xyz.scm (emacs-elfeed): Update to 3.4.1.
 2021-04-29 21:02:13 +03:00
Efraim Flashner bdf9c7db6d
gnu: nano: Update to 5.7. 
* gnu/packages/nano.scm (nano): Update to 5.7.
 2021-04-29 20:53:13 +03:00
Andreas Enge df0b723345
gnu: mpfrcx: Update to 0.6.1. 
* gnu/packages/algebra.scm (mpfrcx): Update to 0.6.1.
 2021-04-29 15:44:15 +02:00
Ludovic Courtès 2c11e7be74
Merge remote-tracking branch 'origin/master' into wip-ungrafting 2021-04-29 15:41:48 +02:00
Guillaume Le Vaillant 041d62f7cc
gnu: bigloo: Update to 4.3g. 
* gnu/packages/scheme.scm (bigloo): Update to 4.3g.
  [source]: Remove bundled libunistring and pcre.
  [arguments]: Add 'fix-gmp-detection' phase. Add options to 'configure' phase
  to throw an error when gmp is not found.
 2021-04-29 14:57:15 +02:00
Roel Janssen 7540f6915c
gnu: Update bedtools to 2.30.0. 
* gnu/packages/bioinformatics.scm (bedtools): Update to 2.30.0,
  [inputs]: Use latest samtools.
 2021-04-29 12:14:06 +02:00
Roel Janssen 558d11c3a8
gnu: Update samtools to 1.12. 
* gnu/packages/bioinformatics.scm (samtools): Update to 1.12.
 2021-04-29 12:14:02 +02:00
Roel Janssen b904bb89a0
gnu: Update bcftools to 1.12. 
* gnu/packages/bioinformatics.scm (bcftools): Update to 1.12.
 2021-04-29 12:13:56 +02:00
Roel Janssen 241994230b
gnu: htslib: Update to 1.12. 
* gnu/packages/bioinformatics.scm (htslib): Update to 1.12.
 2021-04-29 12:13:46 +02:00
Mathieu Othacehe a6a36059d5
gnu: kmscon: Fix layout setup. 
Kmscon may discover multiple inputs, corresponding to multiple devices. This
means that the uxkb_dev_keymap_update function may be called multiple times,
and the FIFO is registered on each input poll loop.

When a new layout is written on the FIFO by the installer, the first input
picking up the message, will apply the new layout. However, that input may not
be the input that the user is currently using.

To fix it, register the FIFO on the first input poll loop, but apply the new
layout on all the inputs in the uxkb_keymap_update_handler function.

* gnu/packages/patches/kmscon-runtime-keymap-switch.patch
(uxkb_keymap_update_handler): Apply the new layout to all the inputs.
(input_new_dev): Register the FIFO fd only on the first input poll loop.
 2021-04-29 12:12:13 +02:00
Ricardo Wurmus 74b3f2cbb1
gnu: Add r-qpcr. 
* gnu/packages/cran.scm (r-qpcr): New variable.
 2021-04-29 09:55:57 +02:00
Kyle Meyer 04ef4c7880
gnu: git-annex: Update to 8.20210428. 
* gnu/packages/haskell-apps.scm (git-annex): Update to 8.20210428.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-04-29 10:17:23 +03:00
Ryan Prior eed2c4843f
gnu: oil: Update to 0.8.10. 
* gnu/packages/shells.scm (oil): Update to 0.8.10.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-04-29 10:14:03 +03:00
BonfaceKilz f2b2016bfd
gnu: Add python-hissp. 
* gnu/packages/python-xyz.scm (python-hissp): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-04-29 10:01:16 +03:00
Kei Kebreau 685e4733ad
gnu: xaos: Update to 4.2.1. 
* gnu/packages/maths.scm (xaos): Update to 4.2.1.
[arguments]: Patch call to "lrelease" in XaoS.pro.
 2021-04-29 00:44:03 -04:00
Vagrant Cascadian d018a11ee0
gnu: linux-libre-arm64-generic@5.10: Add eDP panel, audio and battery 
support for Pinebook Pro.

* gnu/packages/linux.scm (linux-libre-5.10-source): Add pinebook pro lcd patch.
  (linux-libre-arm64-generic-5.10): Add audio and battery modules.
 2021-04-28 16:56:58 -07:00
Vagrant Cascadian e7fbf10066
gnu: linux-libre-arm64-generic: Add eDP panel, battery and audio 
support for Pinebook Pro.

* gnu/packages/linux.scm (linux-libre-5.11-source): Add Pinebook Pro
  lcd patch.
  (linux-libre-arm64-generic): Enable audio and battery modules for
  Pinebook Pro.
* gnu/packages/patches/linux-libre-arm64-generic-pinebook-lcd.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch.
 2021-04-28 16:56:35 -07:00
Xinglu Chen 0d570b6019
gnu: emacs-hyperbole: Install images and help files. 
* gnu/packages/emacs-xyz.scm (emacs-hyperbole)[arguments]: Include help file
and install images for the manual.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-04-29 00:29:41 +02:00
Xinglu Chen 43684b19da
gnu: emacs-corfu: Update to 0.4. 
* gnu/packages/emacs-xyz.scm (emacs-corfu): Update to 0.4.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-04-29 00:25:29 +02:00
Leo Famulari 22b3dd559c
gnu: isc-dhcp: Update bundled BIND to 9.11.31 [security fixes]. 
Fixes CVE-2021-{25214,25215,25216].

* gnu/packages/admin.scm (isc-dhcp)[inputs]: Update bundled BIND to 9.11.31.
 2021-04-28 17:26:05 -04:00
Tobias Geerinckx-Rice b95f422714
gnu: bind: Update to 9.16.15 [fixes CVE-2021-25214, CVE-2021-25215, CVE-2021-25216]. 
* gnu/packages/dns.scm (isc-bind): Update to 9.16.15.
 2021-04-28 22:35:13 +02:00
Leo Famulari 958613f1af
gnu: linux-libre 4.4: Update to 4.4.268. 
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.268.
(linux-libre-4.4-pristine-source): Update hash.
 2021-04-28 16:32:54 -04:00
Leo Famulari cdd22eacae
gnu: linux-libre 4.9: Update to 4.9.268. 
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.268.
(linux-libre-4.9-pristine-source): Update hash.
 2021-04-28 16:32:54 -04:00
Leo Famulari a3535c4383
gnu: linux-libre 4.14: Update to 4.14.232. 
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.232.
(linux-libre-4.14-pristine-source): Update hash.
 2021-04-28 16:32:54 -04:00
Leo Famulari 75d8067779
gnu: linux-libre 4.19: Update to 4.19.189. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.189.
(linux-libre-4.19-pristine-source): Update hash.
 2021-04-28 16:32:54 -04:00
Leo Famulari 3d1c37122e
gnu: linux-libre 5.4: Update to 5.4.115. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.115.
(linux-libre-5.4-pristine-source): Update hash.
 2021-04-28 16:32:53 -04:00
Leo Famulari 4499655166
gnu: linux-libre 5.10: Update to 5.10.33. 
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.33.
(linux-libre-5.10-pristine-source): Update hash.
 2021-04-28 16:32:53 -04:00
Leo Famulari 82eb714cb3
gnu: linux-libre: Update to 5.11.17. 
* gnu/packages/linux.scm (linux-libre-5.11-version): Update to 5.11.17.
(linux-libre-5.11-pristine-source): Update hash.
 2021-04-28 16:32:47 -04:00
Ricardo Wurmus e7707d5262
gnu: pigx-bsseq: Update to 0.1.3. 
* gnu/packages/bioinformatics.scm (pigx-bsseq): Update to 0.1.3.
[inputs]: Add r-ggbio, r-matrixstats, and r-reshape2.
 2021-04-28 21:58:05 +02:00
Tobias Geerinckx-Rice 7f9888516f
gnu: ustr: Don't use vsnprintf. 
This follows up on 1059d1570b,
which caused new tests failures on non-cross builds.

* gnu/packages/textutils.scm (ustr)[arguments]: Return "0" for
./autoconf_vsnprintf.
 2021-04-28 21:41:20 +02:00
Nicolas Goaziou bbdd43fd11
gnu: giac: Update to 1.7.0-3. 
* gnu/packages/algebra.scm (giac): Update to 1.7.0-3.
 2021-04-28 21:37:16 +02:00
Nicolas Goaziou 510fbf7f93
gnu: python-pikepdf: Update to 2.11.4. 
* gnu/packages/python-xyz.scm (python-pikepdf): Update to 2.11.4.
 2021-04-28 21:30:39 +02:00
Nicolas Goaziou 00c06f3aae
gnu: emacs-auctex: Update to 13.0.10. 
* gnu/packages/emacs-xyz.scm (emacs-auctex): Update to 13.0.10.
 2021-04-28 21:27:26 +02:00
Tobias Geerinckx-Rice 1059d1570b
gnu: ustr: Cross-compile. 
Also fix <http://issues.guix.gnu.org/48084>.

* gnu/packages/text-utils.scm (ustr)[arguments]: Use CC-FOR-TARGET.
Add a new 'fix-cross-compilation phase.
 2021-04-28 20:48:22 +02:00
Tobias Geerinckx-Rice f3b2d6681c
gnu: less: Update to 581.2. 
* gnu/packages/less.scm (less): Update to 581.2.
 2021-04-28 19:11:14 +02:00
Tobias Geerinckx-Rice a8dde2fd17
gnu: iproute2: Update to 5.12.0. 
* gnu/packages/linux.scm (iproute2): Update to 5.12.0.
 2021-04-28 19:11:13 +02:00
Tobias Geerinckx-Rice 9dbedb8bae
gnu: folly: Update to 2021.04.26.00. 
* gnu/packages/cpp.scm (folly): Update to 2021.04.26.00.
 2021-04-28 19:11:13 +02:00
Tobias Geerinckx-Rice 97d9814167
gnu: xsimd: Update to 7.5.0. 
* gnu/packages/cpp.scm (xsimd): Update to 7.5.0.
 2021-04-28 19:11:13 +02:00
Tobias Geerinckx-Rice 794bb59b19
gnu: fcitx-qt5: Update to 1.2.6. 
* gnu/packages/fcitx.scm (fcitx-qt5): Update to 1.2.6.
 2021-04-28 19:11:12 +02:00
Marius Bakke 8dcbd8a374
gnu: ungoogled-chromium: Update to 90.0.4430.93. 
* gnu/packages/patches/ungoogled-chromium-system-nspr.patch,
gnu/packages/patches/ungoogled-chromium-system-opus.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for 90.
(debian-patch): Make REVISION optional, default to %DEBIAN-REVISION.
(%chromium-version): New variable.
(%ungoogled-revision): Set to 90.0.4430.85-1-11-g3184907.
(%debian-revision): Set to debian/90.0.4430.85-1.
(%debian-patches): Add more patches; update hashes.
(%ungoogled-origin): Update hash.
(%guix-patches): Remove obsolete patches.
(libvpx/chromium): Update to 1.9.0-147-g61edec1ef.
(ungoogled-chromium)[version]: Base on %CHROMIUM-REVISION and the last
component of %UNGOOGLED-REVISION, a 'git describe --long' style ID.
[arguments]: Add build_with_flite_lib in #:configure-flags.  Add openjpeg
substitution in #:phases.
 2021-04-28 17:59:32 +02:00
Marius Bakke cc03603514
gnu: uBlock Origin: Update to 1.35.0. 
* gnu/packages/browser-extensions.scm (uassets): Update to edfb13aae.
(ublock-origin): Update to 1.35.0.
 2021-04-28 17:59:32 +02:00
Marius Bakke 8fa86141b7
gnu: LLVM, Clang: Add 12.0.0. 
* gnu/packages/patches/clang-12-tools-extra-directory.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/llvm.scm (llvm-12, clang-runtime-12, clang-12,
clang-toolchain-12): New variables.
(llvm-11): Inherit from LLVM-12.
 2021-04-28 17:59:32 +02:00
Ricardo Wurmus 01e33a031e
gnu: Add lofreq. 
* gnu/packages/bioinformatics.scm (lofreq): New variable.
 2021-04-28 17:41:47 +02:00
Mathieu Othacehe 95b3fc12bc
tests: Add gui-uefi-installed-os test. 
* gnu/installer/tests.scm (conclude-installation): Rename it into ...
(start-installation): ... this new procedure.
(complete-installation): New procedure.
(choose-partitioning): Add an uefi-support? argument.
* gnu/tests/install.scm (uefi-firmware): New procedure.
(run-install, qemu-command/writable-image, gui-test-program,
installation-target-os-for-gui-tests): Add an uefi-support? argument.
(%extra-packages): Add grub-efi, fatfsck/static and dosfstools.
(%test-gui-installed-os): New variable.
 2021-04-28 15:51:12 +02:00
Mathieu Othacehe af7a615c5b
installer: Add MSDOS disk label support on UEFI systems. 
Fixes: <https://issues.guix.gnu.org/47889>.

* gnu/installer/parted.scm (esp-partition?): Remove the MSDOS check.
(auto-partition!): On MSDOS disks, check if an ESP partition is present. If
that's the case, do not remove it. Otherwise, if UEFI is supported, create
one.
 2021-04-28 15:50:02 +02:00
Mathieu Othacehe 3f8ea83e2a
installer: Force GPT disk label when UEFI is supported. 
* gnu/installer/newt/partition.scm (run-label-page): Force the GPT disk label
when UEFI is supported.
 2021-04-28 15:49:53 +02:00
Ricardo Wurmus f01b3cd063
gnu: kraken2: Replace references to rsync. 
* gnu/packages/bioinformatics.scm (kraken2)[inputs]: Add rsync.
[arguments]: Replace references to rsync; use WITH-DIRECTORY-EXCURSION to
avoid repeating "scripts".
 2021-04-28 14:50:50 +02:00
Efraim Flashner f7ff886213
gnu: global: Fix cross compiling. 
Coreutils was removed during patch review erroneously.
Reported by Maxime Devos <maximedevos@telenet.be>.

* gnu/packages/code.scm (global)[inputs]: Add coreutils.
 2021-04-28 14:41:31 +03:00
Mathieu Othacehe f97e220b45
ci: Add custom subset. 
* gnu/ci.scm (cuirass-jobs): Add 'custom susbset.
 2021-04-28 11:53:33 +02:00
Mathieu Othacehe 3034f3d05b
ci: Add arguments->systems procedure. 
* gnu/ci.scm (arguments->systems): New procedure.
(cuirass-jobs): Use it.
 2021-04-28 11:53:32 +02:00
Mathieu Othacehe 996b5edf51
ci: Factorize image->job procedure. 
* gnu/ci.scm (image-jobs): Extract ->job procedure into ...
(image->job): ... this new procedure.
 2021-04-28 11:53:32 +02:00
luhui 93242b54e4
gnu: global: Fix globash. 
* gnu/packages/code.scm (global)[arguments]: Add 'fix-globash phase.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-04-28 12:25:09 +03:00
Ricardo Wurmus 5ea5ea6066
gnu: Add python-pyliftover. 
* gnu/packages/bioinformatics.scm (python-pyliftover): New variable.
 2021-04-28 10:52:12 +02:00
Efraim Flashner 562c3a4e12
gnu: keepassxc: Wrap binary with wrap-qt-program. 
* gnu/packages/password-utils.scm (keepassxc)[arguments]: Import
qt-utils module. Replace custom 'wrap-bin phase with 'wrap-qt phase.
 2021-04-28 11:43:34 +03:00
Ricardo Wurmus d027637026
gnu: slurm: Link plugins with libslurm. 
* gnu/packages/parallel.scm (slurm)[arguments]: Add phase
patch-plugin-linker-flags to link plugins with libslurm; run autoconf phase
after this new phase.
 2021-04-28 10:18:07 +02:00
Ricardo Wurmus ffd5bc9600
gnu: krona-tools: Install download scripts. 
* gnu/packages/web.scm (krona-tools)[inputs]: Add curl and make.
[arguments]: Patch and install update scripts to /share.
 2021-04-28 10:18:07 +02:00
Ricardo Wurmus fe28f395bc
gnu: krona-tools: Update to 2.8. 
* gnu/packages/web.scm (krona-tools): Update to 2.8.
 2021-04-28 10:18:07 +02:00
Leo Famulari 1f6854bd06
gnu: Add mmc-utils. 
* gnu/packages/disk.scm (mmc-utils): New variable.
 2021-04-28 00:01:17 -04:00
methuselah-0 3802bb0ba0
services: mysql: Add extra-environment as configuration option. 
* gnu/services/databases.scm (mysql-configuration): Add extra-environment
(mysql-service): Use #:log-file and #:environment-variables
* doc/guix.texi: Document it.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-04-27 20:45:35 +02:00
Efraim Flashner 1f5543e7ff
gnu: Add gdc-11. 
* gnu/packages/gcc.scm (gdc-11): New variable.
 2021-04-27 17:10:22 +03:00
Efraim Flashner 007ec66206
gnu: Add gcc-toolchain-11. 
* gnu/packages/gcc.scm (gcc-11): New variable.
* gnu/packages/commencement.scm (gcc-toolchain-11): New variable.
 2021-04-27 17:10:22 +03:00
Tobias Geerinckx-Rice e97376c15f
gnu: lagrange: Update to 1.3.4. 
* gnu/packages/web-browsers.scm (lagrange): Update to 1.3.4.
 2021-04-27 15:59:05 +02:00
Tobias Geerinckx-Rice 19f67a9197
gnu: ugrep: Use GIT-FILE-NAME helper. 
* gnu/packages/search.scm (ugrep)[source]: Use GIT-FILE-NAME.
 2021-04-27 15:54:00 +02:00
Tobias Geerinckx-Rice 4206cf1fa8
gnu: ugrep: Update to 3.1.12. 
* gnu/packages/search.scm (ugrep): Update to 3.1.12.
 2021-04-27 15:54:00 +02:00
Efraim Flashner f664c4234e
gnu: gcide: Update to 0.53. 
* gnu/packages/dictionaries.scm (gcide): Update to 0.53.
 2021-04-27 16:32:32 +03:00
Tobias Geerinckx-Rice 5203ef4d4e
gnu: freecad: Update to 0.19.2. 
* gnu/packages/engineering.scm (freecad): Update to 0.19.2.
 2021-04-27 15:06:24 +02:00
Tobias Geerinckx-Rice e009b8d712
gnu: html2text: Add informative BSD-4 licence. 
* gnu/packages/textutils.scm (html2text)[license]: Add bsd-4.
 2021-04-27 14:03:16 +02:00
Tobias Geerinckx-Rice 5c81cbda5e
gnu: html2text: Fix cross-compilation. 
* gnu/packages/textutils.scm (html2text)[arguments]: Set $CXX to
the correct (CC-FOR-TARGET).
 2021-04-27 13:57:45 +02:00
Tobias Geerinckx-Rice b0020938e1
gnu: html2text: Run ./configure without errors. 
* gnu/packages/textutils.scm (html2text)[arguments]: Add a custom
'configure phase.  Replace the custom 'fix-paths phase with the
customary #:make-flags equivalent.
 2021-04-27 13:54:44 +02:00
Guillaume Le Vaillant b43e9c8ecd
gnu: Add html2text. 
* gnu/packages/textutils.scm (html2text): New variable.
 2021-04-27 13:36:16 +02:00
Tobias Geerinckx-Rice bb9e77b544
gnu: python-skyfield: Match up input and variable names. 
* gnu/packages/astronomy.scm (python-skyfield)[inputs]: Add "python-"
prefix to alist keys.
 2021-04-27 12:26:19 +02:00
Tobias Geerinckx-Rice 6cf85268af
gnu: python-skyfield: Update to 1.39. 
* gnu/packages/astronomy.scm (python-skyfield): Update to 1.39.
 2021-04-27 12:26:19 +02:00
Tobias Geerinckx-Rice f063e411c0
gnu: python-pyerfa: Update to 1.7.3. 
* gnu/packages/astronomy.scm (python-pyerfa): Update to 1.7.3.
 2021-04-27 12:26:19 +02:00
Tobias Geerinckx-Rice bea70c372c
gnu: debootstrap: Update to 1.0.124. 
* gnu/packages/debian.scm (debootstrap): Update to 1.0.124.
 2021-04-27 12:26:18 +02:00
Tobias Geerinckx-Rice de5da4db36
gnu: bpytop: Update to 1.0.64. 
* gnu/packages/admin.scm (bpytop): Update to 1.0.64.
[description]: Follow upstream changes.
 2021-04-27 12:26:18 +02:00
Tobias Geerinckx-Rice fecdc22ef8
gnu: wireguard-tools: Update to 1.0.20210424. 
* gnu/packages/vpn.scm (wireguard-tools): Update to 1.0.20210424.
 2021-04-27 12:26:18 +02:00
Tobias Geerinckx-Rice 19257ce954
gnu: hdparm: Update to 9.61. 
* gnu/packages/linux.scm (hdparm): Update to 9.61.
 2021-04-27 12:26:18 +02:00
Tobias Geerinckx-Rice 49ae8353d5
gnu: solaar: Update to 1.0.6. 
* gnu/packages/admin.scm (solaar): Update to 1.0.6.
 2021-04-27 12:26:18 +02:00
Tobias Geerinckx-Rice e11246dc58
gnu: youtube-dl: Update to 2021.04.26. 
* gnu/packages/video.scm (youtube-dl): Update to 2021.04.26.
 2021-04-27 12:26:17 +02:00
Tobias Geerinckx-Rice e5c65fb737
gnu: webkitgtk: Always use at least 2 make jobs. 
Fixes <http://issues.guix.gnu.org/47964>.

* gnu/packages/webkit.scm (webkitgtk)[arguments]: Use at least -j2.
 2021-04-27 12:26:17 +02:00
Tobias Geerinckx-Rice 85ead8f751
gnu: exo: Update to 4.16.2. 
* gnu/packages/xfce.scm (exo): Update to 4.16.2.
 2021-04-27 12:26:17 +02:00
Tobias Geerinckx-Rice 6eaba2bc86
gnu: alpine: Update to 2.24.1. 
* gnu/packages/mail.scm (alpine): Update to 2.24.1.
 2021-04-27 12:26:17 +02:00
Tobias Geerinckx-Rice 3dc1c4282e
gnu: procenv: Update to 0.55. 
* gnu/packages/linux.scm (procenv): Update to 0.55.
[arguments]: Remove ‘--disable-silent-rules’ configure flag.
 2021-04-27 12:26:17 +02:00
Nicolas Goaziou 784bd264bc
gnu: scribus: Update to 1.5.7. 
* gnu/packages/scribus.scm (scribus): Update to 1.5.7.
[arguments]: Remove unnecessary phase.
[inputs]: Use regular podofo library.
(podofo-for-scribus): Remove variable.
 2021-04-27 10:38:40 +02:00
Xinglu Chen 5bcb453d43
gnu: fetchmail: Update to 6.4.19. 
* gnu/packages/mail.scm (fetchmail): Update to 6.4.19.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-04-27 11:00:02 +03:00
Nicolas Goaziou f058e5ec10
gnu: emacs-vertico: Update to 0.6. 
* gnu/packages/emacs-xyz.scm (emacs-vertico): Update to 0.6.
 2021-04-27 09:18:40 +02:00
nixo 6afe154327
gnu: xorg-server: Update to 1.20.11 [fixes CVE-2021-3472]. 
* gnu/packages/xorg.scm (xorg-server): Update to 1.20.11.
(xorg-server-for-tests): Don't update to 1.20.11, to avoid changing the
derivation of this package.

Co-authored-by: Leo Famulari <leo@famulari.name>
 2021-04-27 01:58:56 -04:00
Leo Famulari 32db6f5044
gnu: gst-plugins-ugly: Fix some out-of-bounds reads. 
* gnu/packages/patches/gst-plugins-ugly-fix-out-of-bound-reads.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gstreamer.scm (gst-plugins-ugly)[source]: Use it.
 2021-04-27 01:58:56 -04:00
Leo Famulari 5a918564e1
gnu: gst-plugins-base: Fix an invalid read when parsing ID3v2 tags. 
* gnu/packages/patches/gst-plugins-base-fix-id3v2-invalid-read.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gstreamer.scm (gst-plugins-base)[source]: Use it.
 2021-04-27 01:58:56 -04:00
Leo Famulari 163693f8e9
gnu: gst-plugins-bad: Fix an overflow when processing video files. 
* gnu/packages/patches/gst-plugins-bad-fix-overflow.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gstreamer.scm (gst-plugins-bad)[source]: Use it.
 2021-04-27 01:58:55 -04:00
Leo Famulari 46a65b5a3d
gnu: gst-libav: Fix a stack corruption bug. 
* gnu/packages/patches/gst-libav-64channels-stack-corruption.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gstreamer.scm (gst-libav)[source]: Use it.
 2021-04-27 01:58:55 -04:00
Leo Famulari c48b8fed25
gnu: gst-plugins-good: Fix CVE-2021-3497 and CVE-2021-3498. 
* gnu/packages/patches/gst-plugins-good-CVE-2021-3497.patch,
gnu/packages/patches/gst-plugins-good-CVE-2021-3498.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/gstreamer.scm (gst-plugins-good)[source]: Use them.
 2021-04-27 01:58:55 -04:00
Leo Famulari 0cb4ef1c7f
gnu: GIMP: Update to 2.10.24. 
* gnu/packages/gimp.scm (gimp): Update to 2.10.24.
[source]: Remove obsolete patch 'gimp-make-gegl-introspect-optional.patch'.
* gnu/packages/patches/gimp-make-gegl-introspect-optional.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2021-04-27 01:07:54 -04:00
Leo Famulari 67928ad4c2
gnu: gegl: Update to 0.4.30. 
* gnu/packages/gimp.scm (gegl): Update to 0.4.30.
 2021-04-27 01:07:54 -04:00
David Dashyan bd3f3f8150
gnu: emacs-counsel-projectile: Update to 0.3.1-0-06b03c1. 
* gnu/packages/emacs-xyz.scm (emacs-counsel-projectile): Update to
0.3.1-0-06b03c1.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-04-26 21:07:22 +02:00
Raphaël Mélotte 787d631ab2
gnu: Add tio. 
* gnu/packages/terminals.scm (tio): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-04-26 20:58:30 +02:00
Felipe Balbi 1457f76621
gnu: Add vice emulator 
* gnu/packages/emulators.scm (vice): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-04-26 20:53:16 +02:00
Efraim Flashner b33f5d7ff0
gnu: syncthing: Prepare for cross-compiling. 
* gnu/packages/syncthing.scm (syncthing)[arguments]: Add custom
'pre-build phase to not set a local GOBIN directory. Adjust custom
'build and 'install phases accordingly.
 2021-04-26 21:32:50 +03:00
Efraim Flashner 9c8a108186
gnu: syncthing: Allow skipping the check phase. 
* gnu/packages/syncthing.scm (syncthing)[arguments]: Adjust the custom
'check phase so tests only run when enabled.
 2021-04-26 21:32:49 +03:00
Oleg Pykhalov 43a7724040
services: nix: Add /bin/sh to build-sandbox-paths. 
Fixes <https://bugs.gnu.org/46297>.

* gnu/services/nix.scm (nix-service-etc): Add /bin/sh to build-sandbox-paths.
 2021-04-26 20:03:55 +03:00
Nicolas Goaziou 92e2249b1f
gnu: python-pikepdf: Update to 2.11.2. 
* gnu/packages/python-xyz.scm (python-pikepdf): Update to 2.11.2.
 2021-04-26 18:32:46 +02:00
Pierre Neidhardt 7a6e603a43
gnu: Add dufy. 
* gnu/packages/lisp-xyz.scm (cl-dufy, ecl-dufy, sbcl-dufy): New variables.
 2021-04-26 17:45:20 +02:00
Pierre Neidhardt 331c498835
gnu: Add lispbuilder-sdl. 
* gnu/packages/lisp-xyz.scm (cl-lispbuilder-sdl, ecl-lispbuilder-sdl,
sbcl-lispbuilder-sdl): New variables.
 2021-04-26 17:45:09 +02:00
Pierre Neidhardt e6bff48005
gnu: Add cl-mime. 
* gnu/packages/lisp-xyz.scm (cl-mime, ecl-cl-mime, sbcl-cl-mime): New variables.
 2021-04-26 17:19:01 +02:00
Pierre Neidhardt 6cd8361e78
gnu: Add cl-qprint. 
* gnu/packages/lisp-xyz.scm (cl-qprint, ecl-cl-qprint, sbcl-cl-qprint): New variables.
 2021-04-26 17:09:42 +02:00
Lars-Dominik Braun f365d48909
gnu: python-pyside-2: Propagate python-shiboken-2. 
Importing PySide2 failed, because shiboken was not propagated. Testcase:

> guix environment --ad-hoc python python-pyside-2 -- python -c 'import PySide2'
PySide2/__init__.py: Unable to import shiboken2 from , /gnu/store/vpniba85hhzb2270hki61z0d2kfvb64l-profile/lib/python3.8/site-packages, /usr/lib/python38.zip, /usr/lib/python3.8, /usr/lib/python3.8/lib-dynload, /usr/lib/python3.8/site-packages
Traceback (most recent call last):
  File "<string>", line 1, in <module>
  File "/gnu/store/vpniba85hhzb2270hki61z0d2kfvb64l-profile/lib/python3.8/site-packages/PySide2/__init__.py", line 91, in <module>
    _setupQtDirectories()
  File "/gnu/store/vpniba85hhzb2270hki61z0d2kfvb64l-profile/lib/python3.8/site-packages/PySide2/__init__.py", line 57, in _setupQtDirectories
    import shiboken2
ModuleNotFoundError: No module named 'shiboken2'

* gnu/packages/qt.scm (python-pyside-2) [native-inputs]: Move from here…
[propagated-inputs]: …to here.
 2021-04-26 13:52:51 +02:00
Efraim Flashner accb9fe6ac
gnu: gdb-10: Update to 10.2. 
* gnu/packages/gdb.scm (gdb-10): Update to 10.2.
 2021-04-26 14:51:14 +03:00
Efraim Flashner 81c5d985a6
gnu: Add ruby-email-reply-trimmer. 
* gnu/packages/ruby.scm (ruby-email-reply-trimmer): New variable.
 2021-04-26 14:42:16 +03:00
Pjotr Prins 04ab609b13
gnu: Add ruby-redis. 
* gnu/packages/databases.scm (ruby-redis): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-04-26 14:42:13 +03:00
Guillaume Le Vaillant fa5beb03f3
gnu: txr: Update to 257. 
* gnu/packages/lisp.scm (txr): Update to 257.
 2021-04-26 13:30:46 +02:00
Mathieu Othacehe 2c72db4287
gnu: cuirass: Update to 1.0.0-16.40b3238. 
* gnu/packages/ci.scm (cuirass): Update to 1.0.0-16.40b3238.
 2021-04-26 11:59:13 +02:00
Nicolas Goaziou 454029482c
gnu: emacs-auctex: Update to 13.0.9. 
* gnu/packages/emacs-xyz.scm (emacs-auctex): Update to 13.0.9.
 2021-04-26 11:53:27 +02:00
Lars-Dominik Braun 2209e5c753
gnu: python-notebook: Fix tests. 
They failed because JUPYTER_PATH was set in commit
1683e9d967.

* gnu/packages/python-xyz.scm (python-notebook) [#:phases]: Unset
JUPYTER_PATH in 'check.
 2021-04-26 10:37:07 +02:00
Lars-Dominik Braun d57341234d
gnu: python-nbconvert: Enable more tests. 
Enables more tests and fixes a few paths.

* gnu/packages/python-xyz.scm (python-nbconvert) [arguments]: Add new
phase, fixing pandoc/LaTeX paths. Set required environment variables in
'check phase.
[inputs]: Add pandoc and texlive.
[native-inputs]: Add missing inputs for tests.
[propagated-inputs]: Add tornado, which is always required.
 2021-04-26 10:26:48 +02:00
Lars-Dominik Braun 9857abadba
gnu: Add python-pytest-dependency. 
* gnu/packages/check.scm (python-pytest-dependency): New variable.
 2021-04-26 10:26:48 +02:00
Lars-Dominik Braun f57873f20b
gnu: python-ipykernel: Add missing inputs. 
* gnu/packages/python-xyz.scm (python-ipykernel) [propagated-inputs]:
Add tornado and traitlets.
 2021-04-26 10:26:47 +02:00
Lars-Dominik Braun 7914515cd3
gnu: python-jupyter-client: Enable tests. 
* gnu/packages/python-xyz.scm (python-jupyter-client) [arguments]:
Enable tests. Run pytest during 'check.
[native-inputs]: Add missing test inputs.
 2021-04-26 10:26:47 +02:00
Lars-Dominik Braun f371e53aaa
gnu: Add python-ipykernel-bootstrap. 
* gnu/packages/python-xyz.scm (python-ipykernel-bootstrap): New
variable.
 2021-04-26 10:26:47 +02:00
Lars-Dominik Braun a0e98da14f
gnu: Add python-jupyter-client-bootstrap. 
* gnu/packages/python-xyz.scm (python-jupyter-client-bootstrap): New
variable.
 2021-04-26 10:26:47 +02:00
Lars-Dominik Braun 7f06ab7fc0
gnu: python-nbformat: Enable tests. 
* gnu/packages/python-xyz.scm (python-nbformat) [source]: Use git
repository, which has more complete test data.
[arguments]: Run pytest during 'check.
[native-inputs]: Add dependencies required to do that.
 2021-04-26 10:26:47 +02:00
Lars-Dominik Braun 2bcaf11d7c
gnu: Add python-fastjsonschema. 
* gnu/packages/python-xyz.scm (python-fastjsonschema): New variable.
 2021-04-26 10:26:46 +02:00
Lars-Dominik Braun b29e576f67
gnu: Add python-json-spec. 
* gnu/packages/python-xyz.scm (python-json-spec): New variable.
 2021-04-26 10:26:46 +02:00
Lars-Dominik Braun 51646c5435
gnu: python-jupyter-core: Enable tests. 
* gnu/packages/python-xyz.scm (python-jupyter-core) [arguments]: Enable
tests.
[native-inputs]: Add test dependencies.
 2021-04-26 10:26:46 +02:00
Lars-Dominik Braun 1683e9d967
gnu: Move search path JUPYTER_PATH. 
python-jupyter-core provides the `jupyter` binary as well as generic
functions to discover the search path for all Jupyter subprojects. Thus
it should provide the search paths too.

* gnu/packages/python-xyz.scm (jupyter): From here…
(python-jupyter-core): …to here.
[native-search-paths]: Add JUPYTER_CONFIG_DIR, because some Jupyter
projects install config files to their etc/ directory and expect them to
be loaded automatically.
 2021-04-26 10:26:46 +02:00
Lars-Dominik Braun 2ff36e4186
gnu: gtkdatabox: Adjust source URL. 
It looks like the package sources have been relocated. Hash is still the
same.

* gnu/packages/gtk.scm (gtkdatabox) [source]: Adjust URL.
 2021-04-26 10:25:28 +02:00
Efraim Flashner bb62f359bf
gnu: libmicrohttpd: Update to 0.9.73. 
* gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.73.
 2021-04-26 11:16:48 +03:00
Efraim Flashner 3c9856c7b2
gnu: libextractor: Update to 1.11. 
* gnu/packages/gnunet.scm (libextractor): Update to 1.11.
[outputs]: Adjust comment about size of static output.
 2021-04-26 11:16:42 +03:00
Pierre Neidhardt 0581cd8110
gnu: Add simple-rgb. 
* gnu/packages/lisp-xyz.scm (cl-simple-rgb, ecl-simple-rgb, sbcl-simple-rgb):
New variables.
 2021-04-26 09:26:44 +02:00
Ludovic Courtès d904abe076
gnu: kmscon: Open a new keymap-update FIFO once a request has been processed. 
Fixes <https://bugs.gnu.org/39341>.
Reported by Maxim Cournoyer <maxim.cournoyer@gmail.com>.

Until now, as soon as you had selected the keyboard layout in the
Guix System installer, kmscon would start spinning on epoll_wait(2)
calls because of an event on the initial FIFO file
descriptor (corresponding to the fact that the client closed it.)

* gnu/packages/patches/kmscon-runtime-keymap-switch.patch: In
'uxkb_keymap_update_handler', add calls to 'ev_eloop_rm_fd', 'close',
and 'uxkb_dev_keymap_update'  In 'uxkb_dev_keymap_update', add call
to 'unlink'.
 2021-04-25 23:35:04 +02:00
Ludovic Courtès c09e331b25
gnu: xfce, mate: Propagate 'font-dejavu'. 
Fixes <https://bugs.gnu.org/47713>.
Reported by bo0od <bo0od@riseup.net>.

This ensures applications such as IceCat can properly text (numbers in
the case of IceCat).

* gnu/packages/enlightenment.scm (enlightenment)[propagated-inputs]: Add
FONT-DEJAVU.
* gnu/packages/mate.scm (mate)[propagated-inputs]: New field.
* gnu/packages/xfce.scm (xfce)[propagated-inputs]: New field.
 2021-04-25 23:35:04 +02:00
Ludovic Courtès 69afc5fd23
gnu: xfdesktop: Add Guix logo to default background. 
* gnu/packages/xfce.scm (xfdesktop)[arguments]: In
'prepare-background-image' phase, add "xfce-verticals.png".
 2021-04-25 23:35:04 +02:00
Ryan Prior d34371c92b
gnu: esbuild: Update to 0.11.14. 
* gnu/package/web.scm (esbuild): Update to 0.11.14.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-04-25 15:00:18 -04:00
Vinicius Monego 5461efe81f
gnu: Add orange. 
* gnu/packages/orange.scm (orange): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-04-25 14:49:58 -04:00
Vinicius Monego 9605f23ff4
gnu: python-opentsne: Update to 0.5.2. 
* gnu/packages/machine-learning.scm (python-opentsne): Update to 0.5.2.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-04-25 14:49:57 -04:00
Vinicius Monego 34c09669c9
gnu: python-pynndescent: Update to 0.5.2. 
* gnu/packages/machine-learning.scm (python-pynndescent): Update to 0.5.2.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-04-25 14:49:57 -04:00
Vinicius Monego 76fb1a5cf2
gnu: Add python-louvain 0.15. 
* gnu/packages/graph.scm (python-louvain): Rename variable to
python-louvain-0.6.
(python-louvain): New variable.
* gnu/packages/bioinformatics.scm (python-scanpy)[propagated-inputs]: Use
python-louvain-0.6.

Co-authored-by: Leo Famulari <leo@famulari.name>
 2021-04-25 14:49:57 -04:00
Vinicius Monego 0b5ab41f29
gnu: Add python-serverfiles. 
* gnu/packages/orange.scm (python-serverfiles): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-04-25 14:49:57 -04:00
Vinicius Monego 13b2bfad29
gnu: Add python-orange-widget-base. 
* gnu/packages/orange.scm (python-orange-widget-base): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-04-25 14:49:57 -04:00
Vinicius Monego f76ffea242
gnu: Add python-orange-canvas-core. 
* gnu/packages/orange.scm: New file.
* gnu/packages/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-04-25 14:49:57 -04:00
Vinicius Monego 45d80c72dc
gnu: Add python-qasync. 
* gnu/packages/python-xyz.scm (python-qasync): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-04-25 14:49:56 -04:00
Vinicius Monego 50847139f4
gnu: Add python-pyqtgraph. 
* gnu/packages/python-xyz.scm (python-pyqtgraph): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-04-25 14:49:56 -04:00
Vinicius Monego c0fa0efe8a
gnu: Add python-anyqt. 
* gnu/packages/python-xyz.scm (python-anyqt): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-04-25 14:49:56 -04:00
Dion Mendel 862a88612f
gnu: direnv: Install the documentation. 
* gnu/packages/shellutils.scm (direnv)[arguments]: Add a new 'install-manpages'
phase.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-04-25 13:41:59 -04:00
Pierre Neidhardt ea3b79d852
gnu: openrct2: Update to 0.3.3. 
* gnu/packages/games.scm (openrct2): Update to 0.3.3.
 2021-04-25 11:38:53 +02:00
Efraim Flashner 2bbbf673f4
gnu: guile-next: Use a source file-name. 
* gnu/packages/guile.scm (guile-next)[source]: Add file-name field.
 2021-04-25 10:29:53 +03:00
Efraim Flashner 352d420cb0
gnu: crypto++: Use a source file-name. 
* gnu/packages/crypto.scm (crypto++)[source]: Add file-name field.
 2021-04-25 10:28:54 +03:00
Efraim Flashner 860d28da6e
gnu: python-traitlets: Add missing input. 
Reported by phodina <phodina@protonmail.com>.

* gnu/packages/python-xyz.scm (python-traitlets)[propagated-inputs]: Add
python-six.
 2021-04-25 09:13:42 +03:00
Alexandr Vityazev 8380b16a8a
gnu: swayidle: Fix home page. 
* gnu/packages/wm.scm (swayidle)[home-page]: Use the correct home-page.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-04-24 16:45:34 -04:00
Jelle Licht eb5146816b
gnu: emacs-cider: Update to 1.1.0. 
* gnu/packages/emacs-xyz.scm (emacs-cider): Update to 1.1.0.
 2021-04-24 22:21:40 +02:00
Nicolas Goaziou db8334cddd
gnu: fet: Update to 6.0.2. 
* gnu/packages/education.scm (fet): Update to 6.0.2.
 2021-04-24 19:50:15 +02:00
Nicolas Goaziou 5dcc61a62f
gnu: emacs-posframe: Update to 1.0.2. 
* gnu/packages/emacs-xyz.scm (emacs-posframe): Update to 1.0.2.
 2021-04-24 18:50:36 +02:00
B. Wilson 2c93df3d11
services: Add a service for rasdaemon. 
* gnu/services/linux.scm (rasdaemon-configuration, rasdaemon-configuration?,
rasdaemon-configuration-record?, rasdaemon-service-type): New variables.
* doc/guix.texi (Linux Services): Document it.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-04-24 12:30:01 -04:00
B. Wilson 794e26fda7
gnu: Add rasdaemon. 
* gnu/packages/linux.scm (rasdaemon): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-04-24 12:30:01 -04:00
Jack Hill 7600bad639
gnu: fennel: Update to 0.9.1. 
* gnu/packages/lua.scm (fennel): Update to 0.9.1.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-04-24 11:00:02 -04:00
Michael Rohleder 289c5e7040
gnu: xfce4-settings: Update to 4.16.1. 
* gnu/packages/xfce.scm (xfce4-settings): Update to 4.16.1.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2021-04-24 13:02:11 +02:00
Tobias Geerinckx-Rice c3c3e18c70
gnu: qt5ct: Update to 1.2. 
* gnu/packages/qt.scm (qt5ct): Update to 1.2.
 2021-04-24 12:56:38 +02:00
Ricardo Wurmus 4602f686e2
gnu: Add emacs-wisp-mode. 
* gnu/packages/emacs-xyz.scm (emacs-wisp-mode): New variable.
 2021-04-24 11:10:50 +02:00
Ricardo Wurmus 8b0ae1eb72
gnu: guile-wisp: Update to 1.0.4. 
* gnu/packages/guile-xyz.scm (guile-wisp): Update to 1.0.4.
 2021-04-24 08:00:11 +02:00
Tobias Geerinckx-Rice e4fb7b6e39
gnu: nvme-cli: Update to 1.14. 
* gnu/packages/linux.scm (nvme-cli): Update to 1.14.
 2021-04-24 03:44:02 +02:00
Tobias Geerinckx-Rice 4fb77a0bb1
gnu: strawberry: Update to 0.9.3. 
* gnu/packages/music.scm (strawberry): Update to 0.9.3.
 2021-04-24 03:43:25 +02:00
Tobias Geerinckx-Rice 30295ede0d
gnu: libtimidity: Update to 0.2.7. 
* gnu/packages/audio.scm (libtimidity): Update to 0.2.7.
 2021-04-24 03:28:29 +02:00
Tobias Geerinckx-Rice 98a7242e17
gnu: nnn: Use PKG-CONFIG-FOR-TARGET. 
* gnu/packages/admin.scm (nnn)[arguments]: Substitute
PKG-CONFIG-FOR-TARGET for the equivalent STRING-APPEND.
 2021-04-23 23:08:58 +02:00
Tobias Geerinckx-Rice f8a564446a
gnu: nnn: Update to 4.0. 
* gnu/packages/admin.scm (nnn): Update to 4.0.
 2021-04-23 23:06:22 +02:00
Tobias Geerinckx-Rice 799cc194f2
gnu: parallel: Update to 20210422. 
* gnu/packages/parallel.scm (parallel): Update to 20210422.
 2021-04-23 18:37:15 +02:00
Tobias Geerinckx-Rice 61e75d7512
gnu: xmenu: Update to 4.5.5. 
* gnu/packages/wm.scm (xmenu): Update to 4.5.5.
 2021-04-23 18:20:25 +02:00
Tobias Geerinckx-Rice 4dafd97449
gnu: sdparm: Update to 1.12. 
* gnu/packages/disk.scm (sdparm): Update to 1.12.
 2021-04-23 18:20:25 +02:00
Tobias Geerinckx-Rice 0270446dd6
gnu: thermald: Update to 2.4.4. 
* gnu/packages/admin.scm (thermald): Update to 2.4.4.
 2021-04-23 18:20:25 +02:00
Tobias Geerinckx-Rice c242052e29
gnu: xmlsec: Update to 1.2.32. 
* gnu/packages/xml.scm (xmlsec): Update to 1.2.32.
 2021-04-23 18:20:24 +02:00
Efraim Flashner abee44d2c3
gnu: cobol: Add missing inputs. 
Reported by Simon Sobisch <simonsobisch@gnu.org>.

* gnu/packages/cobol.scm (gnucobol)[inputs]: Add json-c, libxml2. Move
newcob ...
[native-inputs]: ... to here.
[arguments]: Add configure-flag to set json-c cflags.
 2021-04-23 17:21:19 +03:00
Efraim Flashner 7af92387cf
gnu: gnucobol: Update home-page. 
Reported by Simon Sobisch <simonsobisch@gnu.org>.

* gnu/packages/cobol.scm (gnucobol)[home-page]: Use official home-page.
 2021-04-23 17:10:14 +03:00
Ricardo Wurmus 34928cc43c
gnu: nanodbc: Build shared libraries. 
* gnu/packages/databases.scm (nanodbc)[arguments]: Build shared libraries.
 2021-04-23 16:07:54 +02:00
Christopher Baines 8f2a73022f
gnu: guix-build-coordinator: Update to 0-27.1305724. 
* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-27.1305724.
 2021-04-23 15:05:38 +01:00
Christopher Baines 311e4b005b
services: guix-build-coordinator: Fix queue builds default config. 
Use the default client port rather than the default agent communication port
for the queue builds script.

* gnu/services/guix.scm (<guix-build-coordinator-queue-builds-configuration>):
Change coordinator default.
 2021-04-23 15:05:38 +01:00
Ricardo Wurmus f1f17c7bba
gnu: Add shorah. 
* gnu/packages/bioinformatics.scm (shorah): New variable.
 2021-04-23 15:53:51 +02:00
Ricardo Wurmus a9b01b7582
gnu: Add r-revgeo. 
* gnu/packages/cran.scm (r-revgeo): New variable.
 2021-04-23 15:53:51 +02:00
Ricardo Wurmus f35e419b57
gnu: Add r-rjsonio. 
* gnu/packages/cran.scm (r-rjsonio): New variable.
 2021-04-23 15:53:51 +02:00
Ricardo Wurmus c9371b698d
gnu: Add r-shinycell. 
* gnu/packages/bioinformatics.scm (r-shinycell): New variable.
 2021-04-23 15:53:51 +02:00
Christopher Baines c15d31ac10
services: guix-build-coordinator: Remove incorrect pid file. 
The queue builds script doesn't create a pid file, so don't have the shepherd
expect to find one.

* gnu/services/guix.scm (guix-build-coordinator-queue-builds-shepherd-services):
Remove #:pid-file.
 2021-04-23 13:40:25 +01:00
Christopher Baines 51201d636a
services: guix-build-coordinator: Fix service activation parts. 
Don't hardcode usernames, as these are in the config. Also fix the %user being
missing from the queue-builds service activation.

* gnu/services/guix.scm (guix-build-coordinator-activation,
guix-build-coordinator-agent-activation): Use config for the user name.
(guix-build-coordinator-queue-builds-activation): Define %user.
 2021-04-23 13:38:49 +01:00
Christopher Baines 69634ad70b
gnu: guix-build-coordinator: Update to 0-26.f836f07. 
* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-26.f836f07.
 2021-04-23 13:38:22 +01:00
Christopher Baines e2ab6fb0dd
services: guix-build-coordinator: Add max-1min-load-average option. 
To the agent configuration.

* gnu/services/guix.scm (<guix-build-coordinator-agent-configuration>): New
field, max-1min-load-average.
(guix-build-coordinator-agent-configuration-max-1min-load-average): New
procedure.
(guix-build-coordinator-agent-shepherd-services): If set, include the
max-1min-load-average in the agent arguments.
 2021-04-23 11:03:23 +01:00
Christopher Baines 44ae570fba
gnu: guix-build-coordinator: Add missing guile-sqlite3 to wrapper. 
* gnu/packages/package-management.scm (guix-build-coordinator)[arguments]:
List guile-sqlite3 as a guile input for wrapping.
 2021-04-23 10:59:38 +01:00
Nicolas Goaziou 57b2ef5648
gnu: emacs-transient: Update to 0.3.2. 
* gnu/packages/emacs-xyz.scm (emacs-transient): Update to 0.3.2.
 2021-04-23 11:27:58 +02:00
Nicolas Goaziou a5b6a9002a
gnu: emacs-modus-themes: Update to 1.3.0. 
* gnu/packages/emacs-xyz.scm (emacs-modus-themes): Update to 1.3.0.
 2021-04-23 11:26:41 +02:00
Nicolas Goaziou bb842f5ae1
gnu: emacs-debbugs: Update to 0.28. 
* gnu/packages/emacs-xyz.scm (emacs-debbugs): Update to 0.28.
 2021-04-23 11:24:39 +02:00
Nicolas Goaziou 2d95eddf19
gnu: emacs-auctex: Update to 13.0.8. 
* gnu/packages/emacs-xyz.scm (emacs-auctex): Update to 13.0.8.
 2021-04-23 11:24:00 +02:00
Alexandr Vityazev 743c0270f6
gnu: Add emacs-nameless. 
* gnu/packages/emacs-xyz.scm (emacs-nameless): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-04-23 10:48:50 +02:00
Xinglu Chen 4091b6c4c2
gnu: Add emacs-vc-hgcmd. 
* gnu/packages/emacs-xyz.scm (emacs-vc-hgcmd): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-04-23 10:48:49 +02:00
Xinglu Chen 01b03c0a9a
gnu: Add emacs-shell-command+. 
* gnu/packages/emacs-xyz.scm (emacs-shell-command+): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-04-23 10:48:49 +02:00
Alexandr Vityazev d64a62a005
gnu: Add emacs-ibuffer-vc. 
* gnu/packages/emacs-xyz.scm (emacs-ibuffer-vc): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-04-23 10:48:49 +02:00
Xinglu Chen fe6e477dfb
gnu: Add emacs-corfu. 
* gnu/packages/emacs-xyz.scm (emacs-corfu): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-04-23 10:48:48 +02:00
Xinglu Chen 19bd25172c
gnu: Add emacs-notmuch-maildir. 
* gnu/packages/emacs-xyz.scm (emacs-notmuch-maildir): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-04-23 10:48:48 +02:00
Sharlatan Hellseher 4bef55db1d
gnu: Add cl-terrable. 
* gnu/packages/lisp-xyz.scm (sbcl-terrable, cl-terrable, ecl-terrable):
  New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-04-23 10:39:50 +02:00
Ludovic Courtès 09ce4568f2
file-systems: read-partition-{uuid,label} don't swallow ENOENT & co. 
Previously, (read-partition-uuid "/does/not/exist") would return #f.
With this change, a 'system-error exception is raised as expected.

* gnu/build/file-systems.scm (ENOENT-safe): Clarify docstring.
(partition-field-reader): Remove use of 'ENOENT-safe'.
(partition-predicate): Wrap READER in 'ENOENT-safe'.
 2021-04-23 00:32:30 +02:00
Leo Prikler c22204cf7b
gnu: wine64-staging: copy wine32-staging libraries. 
A similar phase has been added to wine64 since version 5.21 in order to fix
linkage issues of binaries copied from wine32.
See also <https://bugs.gnu.org/42342>.

* gnu/packages/wine.scm (wine64-staging)[#phases]: Add ‘copy-wine32-libraries’.
 2021-04-22 23:40:21 +02:00
Leo Prikler 6b99c52207
gnu: wine-staging: Update to 6.6. 
* gnu/packages/wine.scm (wine-staging-patchset-data): Update to 6.6.
 2021-04-22 23:40:21 +02:00
Christopher Baines 5a0098e152
gnu: guix-build-coordinator: Update to 0-25.c49b1c8. 
* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-25.c49b1c8.
 2021-04-22 19:25:21 +01:00
Leo Famulari 38a37d5f10
gnu: linux-libre 5.4: Update to 5.4.114. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.114.
(linux-libre-5.4-pristine-source): Update hash.
 2021-04-22 14:16:23 -04:00
Leo Famulari 8e92dba116
gnu: linux-libre 5.10: Update to 5.10.32. 
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.32.
(linux-libre-5.10-pristine-source): Update hash.
 2021-04-22 14:16:23 -04:00
Leo Famulari ffae54504e
gnu: linux-libre: Update to 5.11.16. 
* gnu/packages/linux.scm (linux-libre-5.11-version): Update to 5.11.16.
(linux-libre-5.11-pristine-source): Update hash.
 2021-04-22 14:16:20 -04:00
Tobias Geerinckx-Rice f93a2dd540
gnu: wireshark: Update to 3.4.5 [security fixes]. 
* gnu/packages/networking.scm (wireshark): Update to 3.4.5.
 2021-04-22 16:11:04 +02:00
Tobias Geerinckx-Rice 78fb1dbca2
gnu: libupnp: Update to 1.14.6. 
* gnu/packages/upnp.scm (libupnp): Update to 1.14.6.
 2021-04-22 15:02:51 +02:00
Tobias Geerinckx-Rice 6992407180
gnu: waybar: Update to 0.9.7. 
* gnu/packages/wm.scm (waybar): Update to 0.9.7.
 2021-04-22 15:02:51 +02:00
宋文武 0609713120
gnu: libretro-lowresnx: Update to 1.2. 
* gnu/packages/emulators.scm (libretro-lowresnx): Update to 1.2.
 2021-04-22 20:52:37 +08:00
宋文武 24293db24e
gnu: retroarch: Update to 1.9.1. 
* gnu/packages/emulators.scm (retroarch): Update to 1.9.1.
[arguments]: Add '--disable-git_version' to configure flags.
 2021-04-22 20:32:21 +08:00
Guillaume Le Vaillant 2eb9e57c0c
Revert "gnu: Add cl-weir." 
This reverts commit 5763eba94c.

There may be a license issue with this package making it non-free.
Reported by Giovanni Biscuolo <g@xelera.eu> in
<https://issues.guix.gnu.org/47943>.
 2021-04-22 13:30:31 +02:00
Sharlatan Hellseher 5763eba94c
gnu: Add cl-weir. 
* gnu/packages/lisp-xyz.scm (cl-weir, ecl-weir, sbcl-weir): New variables.

Co-authored-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-04-22 10:36:51 +02:00
Sharlatan Hellseher 3de01371dc
gnu: Add cl-pathname-utils. 
* gnu/packages/lisp-xyz.scm (sbcl-pathname-utils, cl-pathname-utils,
  ecl-pathname-utils): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-04-22 10:36:51 +02:00
WinterHound 296e230896
gnu: Add daemonize. 
* gnu/packages/admin.scm (daemonize): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-04-22 10:33:52 +02:00
Ricardo Wurmus 92032d8081
gnu: Add kraken2. 
* gnu/packages/bioinformatics.scm (kraken2): New variable.
 2021-04-22 08:31:17 +02:00
Tobias Geerinckx-Rice f3eb13df69
gnu: libxlsxwriter: Update to 1.0.3. 
* gnu/packages/xml.scm (libxlsxwriter): Update to 1.0.3.
 2021-04-22 02:21:47 +02:00
Tobias Geerinckx-Rice 1fc10d9414
gnu: openvpn: Update to 2.5.2. 
* gnu/packages/vpn.scm (openvpn): Update to 2.5.2.
 2021-04-22 02:21:47 +02:00
Tobias Geerinckx-Rice c13b9ae3b9
gnu: openconnect-sso: Update to 0.7.3. 
* gnu/packages/vpn.scm (openconnect-sso): Update to 0.7.3.
 2021-04-22 02:21:47 +02:00
Tobias Geerinckx-Rice 37c8f313ce
gnu: exfatprogs: Update to 1.1.1. 
* gnu/packages/file-systems.scm (exfatprogs): Update to 1.1.1.
 2021-04-22 00:32:40 +02:00
Jonathan Brielmaier 58d96474bd
gnu: icedove: Update to 78.10.0. 
* gnu/packages/gnuzilla.scm (icedove): Update to 78.10.0.
 2021-04-22 00:07:57 +02:00
Kei Kebreau 50616a7dfb
gnu: emacspeak: Fix Tclx and espeak server loading. 
Fixes <https://issues.guix.gnu.org/42861>.

* gnu/packages/emacs-xyz.scm (emacspeak)[arguments]: In the 'configure' phase,
add Tclx library to the load path of Tcl in the espeak server script.  Remove
'wrap-program' phase.
 2021-04-21 17:15:37 -04:00
Kei Kebreau 235f2c98b9
gnu: wxmaxima: Update to 21.04.0. 
* gnu/packages/maths.scm (wxmaxima): Update to 21.04.0.
 2021-04-21 17:09:37 -04:00
Arun Isaac ae5128e21e
gnu: Add crm114. 
* gnu/packages/mail.scm (crm114): New variable.
 2021-04-21 23:36:21 +05:30
Ekaitz Zarraga 88fd57fd1f
gnu: kitty: Update to 0.20.1. 
gnu/packages/terminals.scm (kitty): Update to 0.20.1.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-04-21 12:26:25 -04:00
Ekaitz Zarraga 823752646f
gnu: Blender: Add the missing Voxel Remesher. 
* gnu/packages/graphics.scm (blender)[inputs]: Add openvdb.
[arguments]: Pass "-DWITH_OPENVDB=ON" to #:configure-flags.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-04-21 12:17:30 -04:00
Vagrant Cascadian 969b80ef60
gnu: julia-inifile: Fix grammar. 
* gnu/packages/julia-xyz.scm (julia-inifile)[description]: Remove
  gratuitous use of "allows to".
 2021-04-21 08:34:46 -07:00
Vagrant Cascadian 790b2f880e
gnu: emacs-webpaste: Fix grammar. 
* gnu/packages/emacs-xyz.scm (emacs-webpaste)[description]: Remove
  gratuitous use of "allows to".
 2021-04-21 08:34:43 -07:00
Vagrant Cascadian e0f983c0d5
gnu: emacs-svg-icon: Fix grammar. 
* gnu/packages/emacs-xyz.scm (emacs-svg-icon)[description]: Remove
  gratuitous use of "allows to".
 2021-04-21 08:34:35 -07:00
Vagrant Cascadian eb34afe1be
gnu: r-circrnaprofiler: Fix grammar. 
* gnu/packages/bioconductor.scm (r-circrnaprofiler)[description]:
  Remove gratuitous use of "allows to".
 2021-04-21 08:34:21 -07:00
Vagrant Cascadian d80443f765
gnu: emacs-realgud: Fix grammar. 
* gnu/packages/emacs-xyz.scm (emacs-realgud)[description]: Remove
  gratuitous use of "allows to".
 2021-04-21 08:34:10 -07:00
Vagrant Cascadian 239f0259d2
gnu: julia-fillarrays: Fix grammar. 
* gnu/packages/julia-xyz.scm (julia-fillarrays)[description]: Remove
  gratuitous use of "allows to".
 2021-04-21 08:33:56 -07:00
Vagrant Cascadian 140a8841ef
gnu: qite: Fix grammar. 
* gnu/packages/qt.scm (qite)[description]: Remove gratuitous use of
  "allows to".
 2021-04-21 08:33:44 -07:00
Vagrant Cascadian 2967fa1634
gnu: ocaml-mdx: Fix grammar. 
* gnu/packages/ocaml.scm (ocaml-mdx)[description]: Remove gratuitous
  uses of "allows to".
 2021-04-21 08:33:33 -07:00
Vagrant Cascadian bdb1a3385d
gnu: emacs-consult: Fix grammar. 
* gnu/packages/emacs-xyz.scm (emacs-consult)[description]: Remove
  gratuitous use of "allows to".
 2021-04-21 08:33:22 -07:00
Vagrant Cascadian df1d426e6e
gnu: rust-jni-0.18: Fix grammar. 
* gnu/packages/crates-io.scm (rust-jni-0.18)[description]: Remove
  gratuitous use of "permits to".
 2021-04-21 08:33:11 -07:00
Vagrant Cascadian b7e1d03625
gnu: rust-wayland-egl-0.28: Fix grammar. 
* gnu/packages/crates-graphics.scm
  (rust-wayland-egl-0.28)[description]: Remove gratuitous use of
  "allows to".
 2021-04-21 08:32:59 -07:00
Vagrant Cascadian 084d3cac2b
gnu: ipxe: Fix grammar. 
* gnu/packages/bootloaders.scm (ipxe)[description]: Remove gratuitous
  use of "allows to".
 2021-04-21 08:32:49 -07:00
Vagrant Cascadian c69c220ae2
gnu: python-flake8-implicit-str-concat: Fix typo. 
* gnu/packages/python-xyz.scm
  (python-flake8-implicit-str-concat)[description]: Fix spelling of
  "formatting".
 2021-04-21 08:32:36 -07:00
Vagrant Cascadian cf423a3747
gnu: sbcl-clip: Fix typo. 
* gnu/packages/lisp-xyz.scm (sbcl-clip)[description]: Fix spelling of
  "dependent".
 2021-04-21 08:32:24 -07:00
Vagrant Cascadian efd3a1e542
gnu: rust-tint-1: Fix typo. 
* gnu/packages/crates-io.scm (rust-tint-1)[description]: Fix "This
  package" typo.
 2021-04-21 08:32:13 -07:00
Vagrant Cascadian e1c158aea1
gnu: rust-rawkey-0.1: Fix typo. 
* gnu/packages/crates-io.scm (rust-rawkey-0.1)[description]: Fix "This
  package" typo.
 2021-04-21 08:32:02 -07:00
Vagrant Cascadian 04521101dd
gnu: rust-parse-zoneinfo-0.3: Fix typo. 
* gnu/packages/crates-io.scm (rust-parse-zoneinfo-0.3)[description]:
  Fix "This package" typo.
 2021-04-21 08:31:50 -07:00
Vagrant Cascadian 6abac052ba
gnu: rust-parking-2: Fix typo. 
* gnu/packages/crates-io.scm (rust-parking-2)[description]: Fix "This
  package" typo.
 2021-04-21 08:31:38 -07:00
Vagrant Cascadian 8a37b45064
gnu: go-github-com-mesilliac-pulse-simple: Fix typo. 
* gnu/packages/golang.scm
  (go-github-com-mesilliac-pulse-simple)[description]: Fix typo "This
  package".
 2021-04-21 08:31:24 -07:00
Vagrant Cascadian 2fbf2d8b55
gnu: rust-gag-0.1: Fix typo. 
* gnu/packages/crates-io.scm (rust-gag-0.1)[description]: Fix "This
  package" typo.
 2021-04-21 08:31:07 -07:00
Vagrant Cascadian 0e434dad70
gnu: r-msmstests: Fix typo. 
* gnu/packages/bioconductor.scm (r-msmstests)[description]: Fix "This
  package" typo.
 2021-04-21 08:30:47 -07:00
Vagrant Cascadian 65b86c71ca
image: Fix spelling of "evaluate" 
* gnu/build/image.scm: Fix typo.
 2021-04-21 08:30:32 -07:00
Ludovic Courtès f8acd1aeef
gnu: openjdk: Disallow references to the JDK used for build. 
This ensures JDKs don't unintentionally keep references to the one used
to build them, as reported at <https://issues.guix.gnu.org/31719#7> and
fixed by 97a43db8b4.

* gnu/packages/java.scm (icedtea-8)[arguments]: Add #:disallowed-references.
(openjdk9)[arguments]: Likewise.
(openjdk10)[arguments]: Likewise.
(openjdk11)[arguments]: Likewise.
 2021-04-21 14:33:28 +02:00
Ludovic Courtès e511a1d327
gnu: openjdk: Avoid non-top-level 'use-modules'. 
* gnu/packages/java.scm (icedtea-8, openjdk9, openjdk11)[arguments]:
Replace non-top-level 'use-modules' by '@'.
 2021-04-21 14:33:28 +02:00
Carlo Zancanaro 698c4365ba
gnu: openjdk: Fix library substitution when libraries aren't found. 
* gnu/packages/java.scm (icedtea-8, openjdk9, openjdk11)[arguments]:
Change 'find-library' to always return a string.  Change 'find-library'
callers to use 'string-append' rather than 'format'.  Starting from
97a43db8b4, 'find-library' could return #f
and JNI substitutions would emit a literal "#f".

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2021-04-21 14:33:27 +02:00
Guillaume Le Vaillant 8f04cb6c7f
gnu: python-djvulibre: Update to 0.8.6. 
* gnu/packages/python-xyz.scm (python-djvulibre): Update to 0.8.6.
 2021-04-21 14:24:33 +02:00
Guillaume Le Vaillant 95ad844b6a
gnu: jgmenu: Update to 4.3.0. 
* gnu/packages/xdisorg.scm (jgmenu): Update to 4.3.0.
  [arguments]: Add 'test-target' keyword. Remove 'fix-tests' phase. Use
  'cc-for-target' instead of hard-coding gcc.
 2021-04-21 14:23:34 +02:00