9478c05955
gnu: getmail: Update to 5.1.
...
* gnu/packages/mail.scm (getmail): Update to 5.1.
Signed-off-by: Leo Famulari <leo@famulari.name>
2017-07-22 20:34:47 -04:00
f3f68a442c
gnu: metabat: Update to 2.11.1.
...
* gnu/packages/bioinformatics.scm (metabat): Update to 2.11.1.
[source]: Add patch to fix compilation.
[arguments]: Adjust regular expressions modifying 'SConstruct'.
* gnu/packages/patches/metabat-fix-compilation.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-07-23 10:29:36 +10:00
897ab082b2
gnu: python-plastid: Update to 0.4.8.
...
* gnu/packages/bioinformatics.scm (python-plastid): Update to 0.4.8.
2017-07-23 10:29:36 +10:00
0620387a59
gnu: bcftools: Update to 1.5.
...
* gnu/packages/bioinformatics.scm (bcftools): Update to 1.5.
[origin]: Remove fix-makefile patch.
[arguments]: Add configure flags, add LIBS make flag. Do not delete
configure phase.
* gnu/packages/patches/bcftools-fix-makefile.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-07-23 10:29:36 +10:00
63fa0ffcd4
gnu: samtools: Update to 1.5.
...
* gnu/packages/bioinformatics.scm (samtools): Update to 1.5.
2017-07-23 10:29:36 +10:00
4fb6d1280e
gnu: htslib: Update to 1.5.
...
* gnu/packages/bioinformatics.scm (htslib): Update to 1.5.
2017-07-23 10:29:35 +10:00
60739965da
gnu: python-pysam: Update to 0.11.2.2.
...
* gnu/packages/bioinformatics.scm (python-pysam): Update to 0.11.2.2.
2017-07-23 10:29:35 +10:00
bca2c57658
gnu: bamm: Use htslib-1.3.
...
* gnu/packages/bioinformatics (htslib-1.3): New variable.
(bamm)[inputs]: Replace htslib with htslib-1.3.
2017-07-23 10:29:35 +10:00
98593f9f51
gnu: bcftools: Update to 1.4.1.
...
* gnu/packages/bioinformatics.scm (bcftools): Update to 1.4.1.
[arguments]: Move Makefile modifications from here ...
[source]: ... to added patch. Adjust patch for update to 1.4.
* gnu/packages/patches/bcftools-fix-makefile.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2017-07-23 10:29:35 +10:00
4ab1644049
gnu: samtools: Update to 1.4.1.
...
* gnu/packages/bioinformatics.scm (samtools): Update to 1.4.1.
[arguments]: Add '--with-htslib=system' configure flag.
[inputs]: Add htslib.
2017-07-23 10:29:34 +10:00
a9e4a1e641
gnu: htslib: Update to 1.4.1.
...
* gnu/packages/bioinformatics.scm (htslib): Update to 1.4.1.
[inputs]: Add curl, openssl.
2017-07-23 10:29:34 +10:00
c842d42593
gnu: samtools: Use "modify-phases" syntax.
...
* gnu/packages/bioinformatics.scm (samtools)[arguments]: Use "modify-phases"
syntax.
2017-07-23 10:29:34 +10:00
c62d1a6e6c
gnu: bspwm: Update to 0.9.3.
...
* gnu/packages/wm.scm (bspwm): Update to 0.9.3.
Signed-off-by: Leo Famulari <leo@famulari.name>
2017-07-22 20:17:46 -04:00
7e3c977da6
gnu: Add oksh.
...
* gnu/packages/shells.scm (oksh): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
2017-07-22 20:15:21 -04:00
36378bd57e
gnu: quassel: Enable TLS.
...
* gnu/packages/patches/quassel-fix-tls-check.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/irc.scm (quassel)[source]: Use it.
Signed-off-by: Leo Famulari <leo@famulari.name>
2017-07-22 20:04:53 -04:00
e745221408
gnu: youtube-dl: Update to 2017.07.23.
...
* gnu/packages/video.scm (youtube-dl): Update to 2017.07.23.
2017-07-23 01:59:32 +02:00
4b8b245b83
gnu: mosh: Update to 1.3.2.
...
* gnu/packages/ssh.scm (mosh): Update to 1.3.2.
2017-07-23 01:27:29 +02:00
a68a83f015
gnu: Add openmolar.
...
* gnu/packages/medical.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
Co-authored-by: Quiliro <quiliro@fsfla.org>
2017-07-22 23:48:58 +02:00
2456153adc
gnu: Add python-pyqt+qscintilla.
...
* gnu/packages/qt.scm (python-pyqt+qscintilla): New variable.
2017-07-22 23:48:58 +02:00
06d04dbcfc
gnu: Add python-qscintilla.
...
* gnu/packages/qt.scm (python-qscintilla): New variable.
Co-authored-by: Quiliro <quiliro@fsfla.org>
2017-07-22 23:48:57 +02:00
3befd0a97c
gnu: Add qscintilla.
...
* gnu/packages/qt.scm (qscintilla): New variable.
Co-authored-by: Quiliro <quiliro@fsfla.org>
2017-07-22 23:48:57 +02:00
056468dc5f
gnu: Add cran module.
...
* gnu/packages/cran.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/statistics.scm (r-colorspace): Move to cran.scm.
2017-07-22 23:48:57 +02:00
30f8349efb
gnu: linux-libre: Update to 4.12.3.
...
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.3.
(%linux-libre-hash): Update hash.
2017-07-22 14:46:00 -04:00
d422eac54e
gnu: linux-libre@4.9: Update to 4.9.39.
...
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.39.
2017-07-22 14:45:06 -04:00
f97c67a275
gnu: linux-libre@4.4: Update to 4.4.78.
...
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.78.
2017-07-22 14:44:24 -04:00
3a4b0b126b
gnu: r-s4vectors: Update to 0.14.3.
...
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.14.3.
2017-07-22 17:31:19 +02:00
a35a1e9c13
gnu: r-genomicranges: Update to 1.28.4.
...
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.28.4.
2017-07-22 17:22:07 +02:00
aa51da7eef
gnu: Remove python-fake-factory leftovers.
...
This is a followup to c799eb2eb8
2017-07-22 15:07:45 +02:00
c799eb2eb8
gnu: Remove python-fake-factory.
...
Superseded by python-faker since ce7911ddae
2017-07-22 14:31:28 +02:00
2580c2f07f
gnu: python-pyopenssl: Update to 17.2.0.
...
* gnu/packages/patches/python-pyopenssl-17.1.0-test-overflow.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/python.scm (python-pyopenssl, python2-pyopenssl): Update to 17.2.0.
[native-inputs]: Add PYTHON-FLAKY.
[source](patches): Remove.
2017-07-22 14:31:28 +02:00
4e52739c61
gnu: Add python-flaky.
...
* gnu/packages/python.scm (python-flaky, python2-flaky): New variables.
2017-07-22 14:31:27 +02:00
6027cb8a82
gnu: maim: Update to 5.4.64.
...
* gnu/packages/xdisorg.scm (maim): Update to 5.4.64.
2017-07-22 14:31:27 +02:00
eb2b5f9d03
gnu: slop: Update to 6.3.47.
...
* gnu/packages/xdisorg.scm (slop): Update to 6.3.47.
[inputs]: Add GLEW.
2017-07-22 14:31:27 +02:00
0cd95cefe0
gnu: parallel: Update to 20170722.
...
* gnu/packages/parallel.scm (parallel): Update to 20170722.
2017-07-22 13:47:26 +02:00
bc35c9d318
gnu: font-gnu-unifont: Update to 10.0.05.
...
* gnu/packages/fonts.scm (font-gnu-unifont): Update to 10.0.05.
2017-07-22 13:47:26 +02:00
f7975a3bde
gnu: nano: Update to 2.8.6.
...
* gnu/packages/nano.scm (nano): Update to 2.8.6.
2017-07-22 13:47:25 +02:00
f03d8d67a5
gnu: acct: Update to 6.6.4.
...
* gnu/packages/acct.scm (acct): Update to 6.6.4.
2017-07-22 13:47:25 +02:00
84fcb58050
gnu: Add conda.
...
* gnu/packages/package-management.scm (conda): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-07-22 12:26:30 +02:00
4bc08b6e79
gnu: Add python-conda.
...
* gnu/packages/package-management.scm (python-conda, python2-conda): New
variables.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-07-22 12:26:29 +02:00
513d35f191
gnu: Add python-anaconda-client.
...
* gnu/packages/package-management.scm (python-anaconda-client,
python2-anaconda-client): New variables.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-07-22 12:26:29 +02:00
1f84ff5135
gnu: Add python-clyent.
...
* gnu/packages/python.scm (python-clyent, python2-clyent): New variables.
2017-07-22 12:26:29 +02:00
3fee003950
gnu: Update python-pytz to 2017.2.
...
* gnu/packages/python.scm (python-pytz, python2-pytz): Update to 2017.2.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-07-22 12:26:29 +02:00
de469015c4
gnu: man-pages: Update to 4.12.
...
* gnu/packages/man.scm (man-pages): Update to 4.12.
2017-07-22 12:18:58 +02:00
1ffe41711b
gnu: tint2: Update to 0.14.6.
...
* gnu/packages/xdisorg.scm (tint2): Update to 0.14.6.
2017-07-21 22:41:24 -05:00
e9185cbac6
gnu: icedtea@3: Update to 3.5.0 [security fixes].
...
Fixes CVE-2017-{10053,10067,10074,10074,10078,10081,10087,10089,10090,10096,
10101,10102,10107,10108,10109,10110,10111,10115,10116,10118,10135,10176,10193,
10198}.
* gnu/packages/java.scm (icedtea-8): Update to 3.5.0.
2017-07-21 17:30:08 -04:00
c800fd564b
services: cuirass: Add fallback parameter.
...
* gnu/services/cuirass.scm (<cuirass-configuration>)[fallback?]: New field.
(cuirass-shepherd-service): Take it into account.
* doc/guix.texi (Continuous Integration): Document it.
2017-07-21 21:46:47 +02:00
3c14378381
gnu: vim: Update to 8.0.0727 [fixes CVE-2017-11109].
...
* gnu/packages/vim.scm (vim): Update to 8.0.0727.
(vim-full)[source]: Add field and hold back at version 8.0.0600.
2017-07-21 15:20:23 -04:00
6f226c078c
gnu: mysql: Update to 5.7.19.
...
* gnu/packages/databases.scm (mysql): Update to 5.7.19.
2017-07-21 14:50:24 -04:00
0cf9f9b1e3
gnu: libpsl: Update to 0.18.0.
...
* gnu/packages/web.scm (libpsl): Update to 0.18.0.
[native-inputs]: Add pkg-config.
[inputs]: Replace icu4c with libidn2; add libunistring.
2017-07-21 12:24:47 +02:00
cd4f35c379
gnu: borg: Update to 1.0.11.
...
* gnu/packages/backup.scm (borg): Update to 1.0.11.
2017-07-21 01:23:25 -04:00
f8fabfc99f
gnu: bitcoin-core: Actually build the graphical client.
...
* gnu/packages/finance.scm (bitcoin-core)[inputs]: Replace qtbase with qt.
2017-07-20 18:42:28 -04:00
81c35029d4
gnu: heimdal: Fix CVE-2017-{6594,11103}.
...
* gnu/packages/patches/heimdal-CVE-2017-6594.patch,
gnu/packages/patches/heimdal-CVE-2017-11103.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/kerberos.scm (heimdal)[source]: Use them.
2017-07-20 15:33:53 -04:00
cfd6a3b1ee
gnu: Add bmon.
...
* gnu/packages/networking.scm (bmon): New variable.
2017-07-20 23:19:24 +05:30
fb5dfa86b1
gnu: texlive-latex-mdwtools: Fix syntax error in description.
...
* gnu/packages/tex.scm (texlive-latex-mdwtools)[description]: Fix texinfo
syntax error.
2017-07-20 16:40:29 +02:00
09acbb02c7
gnu: texlive-latex-environ: Fix invalid texinfo markup.
...
* gnu/packages/tex.scm (texlive-latex-environ)[description]: Fix texinfo
syntax errors.
2017-07-20 16:36:31 +02:00
0daa1d646a
gnu: Add mksh.
...
* gnu/packages/shells.scm (mksh): New variable.
2017-07-20 19:55:22 +05:30
8582e03ae5
gnu: Remove a left-over patch.
...
This is a followup to commit 426b0b898f
2017-07-20 09:00:36 -04:00
426b0b898f
gnu: pcre: Update replacement to 8.41 [fixes CVE-2017-{7244,7245,7246}].
...
* gnu/packages/pcre.scm (pcre)[replacement]: Update to pcre-8.41.
(pcre/fixed): Replace with ...
(pcre-8.41): ... new variable.
2017-07-20 08:26:40 -04:00
8b113790fa
tests: Use 'virtual-machine' records instead of monadic procedures.
...
* gnu/tests/base.scm (%test-basic-os): Use 'let*' instead of 'mlet*' and
'virtual-machine' instead of 'system-qemu-image/shared-store-script'.
(run-mcron-test): Likewise.
(run-nss-mdns-test): Likewise.
* gnu/tests/dict.scm (run-dicod-test): Likewise.
* gnu/tests/mail.scm (run-opensmtpd-test): Likewise.
(run-exim-test): Likewise.
* gnu/tests/messaging.scm (run-xmpp-test): Likewise.
* gnu/tests/networking.scm (run-inetd-test): Likewise.
* gnu/tests/nfs.scm (run-nfs-test): Likewise.
* gnu/tests/ssh.scm (run-ssh-test): Likewise.
* gnu/tests/web.scm (run-nginx-test): Likewise.
2017-07-20 11:57:13 +02:00
ed419fa0c5
vm: Add a <virtual-machine> type and associated gexp compiler.
...
* gnu/system/vm.scm (system-qemu-image/shared-store-script): Add
#:options parameter and honor it.
(<virtual-machine>): New record type.
(virtual-machine): New macro.
(port-forwardings->qemu-options, virtual-machine-compiler): New
procedures.
2017-07-20 11:57:13 +02:00
c97cef0a91
gnu: Add premake4.
...
* gnu/packages/build-tools.scm (premake4): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-07-20 11:57:13 +02:00
742242a5be
gnu: Add java-commons-cli@1.2.
...
* gnu/packages/java.scm(java-commons-cli-1.2): New variable.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2017-07-20 11:57:12 +02:00
6158309450
gnu: Update g-wrap to use guile-2.2.
...
* gnu/packages/guile.scm (g-wrap): [propagated-inputs]: Use guile-2.2.
[arguments]: Add "--disable-Werror" to configure-flags.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-07-20 11:57:12 +02:00
ab466d79e1
gnu: Add eolie.
...
* gnu/packages/gnome.scm (eolie): New variable.
2017-07-20 08:41:28 +02:00
0762a1dbf4
gnu: perl-html-template: Update to 2.97.
...
* gnu/packages/web.scm (perl-html-template): Update to 2.97.
2017-07-20 02:10:55 +02:00
1a34ca0e8f
gnu: openh264: Update to 1.7.0.
...
* gnu/packages/video.scm (openh264): Update to 1.7.0.
2017-07-20 01:36:51 +02:00
ba4e15ae85
gnu: gnome-mpv: Update to 0.12.
...
* gnu/packages/video.scm (gnome-mpv): Update to 0.12.
2017-07-20 01:36:50 +02:00
29ac89a635
gnu: Add 0xffff.
...
* gnu/packages/flashing-tools.scm (0xffff): New variable.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-07-20 00:54:52 +02:00
05c8851695
gnu: Add libusb@0.1.
...
* gnu/packages/libusb.scm (libusb-0.1): New variable.
* gnu/packages/patches/libusb-0.1-disable-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-07-20 00:54:52 +02:00
7c0d4c3a6b
gnu: lapack: Fix hash of release 3.7.1
...
Apparently the release was modified (cleaned-up) in-place. An issue was opened
at https://github.com/Reference-LAPACK/lapack-release/issues/4 .
* gnu/packages/maths.scm (lapack): Fix sha256 hash.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-07-20 00:54:51 +02:00
ca8fb248de
gnu: Add patches missing from dist_patch_DATA.
...
Reported by Eric Bavier.
* gnu/local.mk (dist_patch_DATA): Add
gnu/packages/patches/hmmer-remove-cpu-specificity.patch,
gnu/packages/patches/jacal-fix-texinfo.patch,
gnu/packages/patches/python-pbr-fix-man-page-support.patch and
gnu/packages/patches/vsearch-unbundle-cityhash.patch.
2017-07-20 08:51:56 +10:00
dc05f6523e
gnu: qsyncthingtray: Update to 0.5.8.
...
* gnu/packages/sync.scm (qsyncthingtray): Update to 0.5.8.
2017-07-20 00:35:02 +02:00
53cea7594c
gnu: dub: Update to 1.4.0.
...
* gnu/packages/ldc.scm (dub): Update to 1.4.0.
2017-07-20 00:34:57 +02:00
e7304ab18b
gnu: Add python-sphinx-1.6.
...
* gnu/packages/python.scm (python-sphinx-1.6): New variable.
2017-07-19 22:27:03 +02:00
5f94ec913f
gnu: Add python-sphinxcontrib-websupport.
...
* gnu/packages/python.scm (python-sphinxcontrib-websupport): New variable.
2017-07-19 22:27:02 +02:00
423d2136f0
gnu: Add python-xapian-bindings.
...
* gnu/packages/search.scm (python-xapian-bindings): New variable.
2017-07-19 22:27:02 +02:00
6d5deda16d
gnu: graphicsmagick: Update to 1.3.26.
...
* gnu/packages/imagemagick.scm (graphicsmagick): Update to 1.3.26.
[source]: Use url-fetch and add SourceForge URL. Remove snippet.
2017-07-19 13:56:43 -04:00
8016393eab
gnu: mpv: Update to 0.26.0.
...
* gnu/packages/video.scm (mpv): Update to 0.26.0.
2017-07-19 10:33:31 -04:00
fd40857938
gnu: r-bsgenome-hsapiens-ucsc-hg19: Update hash.
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* gnu/packages/bioinformatics.scm (r-bsgenome-hsapiens-ucsc-hg19)[source]:
Update hash because the tarball changed in place.
2017-07-19 14:39:37 +02:00
1fb9b6782b
gnu: snakemake: Update to 3.13.3.
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* gnu/packages/python.scm (snakemake): Update to 3.13.3.
2017-07-19 14:39:37 +02:00
688fbf572e
gnu: guitarix: Update to 0.35.5.
...
* gnu/packages/audio.scm (guitarix): Update to 0.35.5.
2017-07-19 14:39:37 +02:00
2324541bd0
gnu: sortmerna: Limit support to x86_64 and i686 only.
...
* gnu/packages/bioinformatics.scm (sortmerna)[supported-systems]: New field.
2017-07-19 14:37:47 +03:00
a388c951dd
gnu: totem: Do not build static libraries.
...
* gnu/packages/gnome.scm (totem)[arguments]: Pass "--disable-static".
This reduces the size of Totem from 11 MiB to 9 MiB.
2017-07-19 11:33:02 +02:00
644e5f17df
download: Add OpenBSD mirrors.
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* guix/download.scm (%mirrors) <openbsd>: Add HTTPS OpenBSD mirrors.
* gnu/packages/ntp.scm (openntpd)[source]: Use them.
* gnu/packages/ssh.scm (openssh)[source]: Likewise.
* gnu/packages/tls.scm (libressl)[source]: Likewise.
2017-07-19 01:42:08 +02:00
b225b1bec2
gnu: openntpd: Update to 6.1p1.
...
* gnu/packages/ntp.scm (openntpd): Update to 6.1p1.
2017-07-19 01:06:55 +02:00
c48fa0ad32
gnu: tlp: Update to 1.0.
...
* gnu/packages/linux.scm (tlp): Update to 1.0.
2017-07-19 01:06:54 +02:00
137a330988
gnu: meson: Update to 0.41.1.
...
* gnu/packages/build-tools.scm (meson) Update to 0.41.1.
2017-07-19 01:06:54 +02:00
ec5c24f9a8
gnu: totem: Disable automatic plugin installation.
...
* gnu/packages/gnome.scm (totem)[arguments]: Add #:configure-flags.
2017-07-18 22:46:47 +02:00
8d033e3e16
vm: 'iso9660-image' produces a single-file output.
...
* gnu/system/vm.scm (expression->derivation-in-linux-vm): Add
#:single-file-output? and pass it to 'load-in-linux-vm'.
(iso9660-image): Pass #:single-file-output? to
'expression->derivation-in-linux-vm'.
* gnu/build/vm.scm (load-in-linux-vm): Add #:single-file-output? and
honor it.
2017-07-18 21:41:35 +02:00
45c18f8529
gnu: node: Add search path specification for 'NODE_PATH'.
...
* gnu/packages/node.scm (node)[native-search-paths]: New field.
2017-07-18 17:49:02 +02:00
21ffcd65c5
vm: Increase disk size overhead estimate.
...
* gnu/build/vm.scm (estimated-partition-size): Add 25% to the graph size.
2017-07-18 17:14:38 +02:00
e333efd53a
gnu: libstaroffice: Update to 0.0.4.
...
* gnu/packages/libreoffice.scm (libstaroffice): Update to 0.0.4.
2017-07-18 17:14:38 +02:00
852241eb7d
system: Add 'newuidmap' and 'newgidmap' to %SETUID-PROGRAMS.
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* gnu/system.scm (%setuid-programs): Add 'newuidmap' and 'newgidmap'.
2017-07-18 22:16:08 +08:00
172b3e2cc2
services: sysctl: Fix typo.
...
* gnu/services/sysctl.scm: Fix typo of 'make-sysctl-configuration'.
2017-07-18 20:16:03 +08:00
e4e525096b
gnu: moka-icon-theme: Update to 5.3.6.
...
* gnu/packages/gnome.scm (moka-icon-theme): Update to 5.3.6.
2017-07-18 13:46:23 +02:00
29ddf4b6e8
gnu: edi: Update to 0.5.1.
...
* gnu/packages/enlightenment.scm (edi): Update to 0.5.1.
2017-07-18 13:46:23 +02:00
84de27c83b
gnu: enblend-enfuse: Use texlive-tiny.
...
* gnu/packages/photo.scm (enblend-enfuse)[native-inputs]: Replace
texlive-minimal with texlive-tiny.
2017-07-18 10:00:51 +02:00
9840b8faaf
gnu: c-toxcore: Update to 0.1.9.
...
* gnu/packages/messaging.scm (c-toxcore): Update to 0.1.9.
[build-system]: Switch to cmake-build-system.
[native-inputs]: Remove autoconf, automake, libtool, and check.
[inputs]: Rename to...
[propagated-inputs]: ...this.
[arguments]: Remove field.
2017-07-18 09:58:56 +02:00
8b5bf30804
gnu: Rename (gnu packages gforth) to (gnu packages forth).
...
* gnu/local.mk (GNU_SYSTEM_MODULES): Rename gforth.scm to forth.scm.
* gnu/packages/gforth.scm: Rename file to forth.scm.
* gnu/packages/forth.scm: Renamed from gforth.scm.
2017-07-18 09:58:56 +02:00
8b89c1717c
gnu: python-numpy-documentation: Use texlive-union.
...
* gnu/packages/python.scm (python-numpy-documentation)[native-inputs]: Replace
"texlive" with a texlive-union.
2017-07-18 09:58:56 +02:00
2805f9b2a0
gnu: raxml: Limit to x86_64 and i686 only.
...
* gnu/packages/bioinformatics.scm (raxml)[supported-systems]: New field.
2017-07-18 09:00:10 +03:00
4c4485f304
gnu: qemu: Fix CVE-2017-11334.
...
* gnu/packages/patches/qemu-CVE-2017-11334.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/virtualization.scm (qemu)[source]: Use it.
2017-07-17 23:47:03 -04:00
144c8db9bd
gnu: chicken: Fix CVE-2017-11343.
...
* gnu/packages/patches/chicken-CVE-2017-11343.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/scheme.scm (chicken)[source]: Use it.
2017-07-17 23:47:00 -04:00
27305769de
gnu: python-cryptograpy: Update to 2.0.
...
* gnu/packages/python.scm (python-cryptography-vectors,
python2-cryptography-vectors, python-cryptography, python2-cryptography):
Update to 2.0.
2017-07-18 01:31:10 +02:00
b77cc624ec
gnu: orc: Update to 0.4.27.
...
* gnu/packages/gstreamer.scm (orc): Update to 0.4.27.
2017-07-18 01:30:16 +02:00
867baed07f
gnu: imagemagick: Update to 6.9.9-0.
...
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-0.
2017-07-17 18:20:51 -04:00
b19a49d015
locale: Demonadify the locale creation API.
...
* gnu/system/locale.scm (single-locale-directory): Use 'computed-file'
instead of 'gexp->derivation'.
(locale-directory): Adjust accordingly and do the same.
* gnu/system.scm (operating-system-directory-base-entries): Adjust
accordingly.
2017-07-17 23:41:36 +02:00
6d833b13b7
gnu: Remove glibc@2.21 and its traces.
...
* gnu/packages/base.scm (glibc-2.21): Remove.
* gnu/system/locale.scm (localedef-command)[maybe-version-directory]:
Remove. Replace call with use of 'package-version'.
(single-locale-directory): Remove 'version>=' conditional.
2017-07-17 23:41:36 +02:00
1cbcbc8600
gnu: screen: Update to 4.6.1.
...
* gnu/packages/screen.scm (screen): Update to 4.6.1.
2017-07-17 22:35:06 +03:00
0862b95433
build, vm: Use a less common label.
...
* gnu/build/vm.scm (initialize-hard-disk): Use "GuixSD_image" as label.
* gnu/system/install.scm (installation-os): Likewise.
* gnu/system/vm.scm (system-disk-image): Likewise.
2017-07-17 20:20:24 +02:00
70e7367df1
gnu: emacs-ahungry-theme: Upgrade to 1.4.0.
...
* gnu/packages/emacs.scm (emacs-ahungry-theme): Upgrade to 1.4.0.
Signed-off-by: Leo Famulari <leo@famulari.name>
2017-07-17 12:06:39 -04:00
da20c38f35
gnu: dash: Use the release tarball.
...
* gnu/packages/shells.scm (dash)[source]: Use the release tarball
instead of a Git checkout.
[native-inputs]: Remove field.
[arguments]: Remove 'bootstrap' phase.
2017-07-17 11:48:46 -04:00
371ca85f52
gnu: font-wqy-zenhei: Use 'font-build-system'.
...
* gnu/packages/fonts.scm (font-wqy-zenhei): Switch to font-build-system.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-07-17 15:13:41 +02:00
7fc6ce46f9
gnu: font-wqy-microhei: Use 'font-build-system'.
...
* gnu/packages/fonts.scm (font-wqy-microhei): Switch to font-build-system.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-07-17 15:13:41 +02:00
9b7ee28d57
gnu: Add Poly/ML.
...
* gnu/packages/sml.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-07-17 15:13:41 +02:00
7ad2a4f1d5
gnu: supertuxkart: Fix build on aarch64.
...
* gnu/packages/games.scm (supertuxkart)[source]: Add patch.
* gnu/packages/patches/supertuxkart-angelscript-ftbfs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2017-07-17 15:29:56 +03:00
5beecc320e
gnu: Add sooperlooper.
...
* gnu/packages/patches/sooperlooper-build-with-wx-30.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/music.scm (sooperlooper): New variable.
2017-07-17 14:01:47 +02:00
c58d1b5f55
gnu: texlive-union: Silence union-build.
...
* gnu/packages/tex.scm (texlive-union)[arguments]: Suppress the output of
"union-build".
2017-07-17 14:01:47 +02:00
274e3d4f3e
gnu: Add texlive-latex-type1cm.
...
* gnu/packages/tex.scm (texlive-latex-type1cm): New variable.
2017-07-17 14:01:47 +02:00
1b10d49405
gnu: Add texlive-fonts-txfonts.
...
* gnu/packages/tex.scm (texlive-fonts-txfonts): New variable.
2017-07-17 14:01:47 +02:00
245f1f31e8
gnu: Add texlive-latex-enumitem.
...
* gnu/packages/tex.scm (texlive-latex-enumitem): New variable.
2017-07-17 14:01:47 +02:00
4701946775
gnu: texlive-dvips: Install font maps.
...
* gnu/packages/tex.scm (texlive-dvips)[native-inputs]: Add dvips-font-maps and
dvips-base-enc.
[arguments]: Install them.
2017-07-17 14:01:46 +02:00
263d0c829e
gnu: texlive-union: Add texlive-fontname to defaults.
...
* gnu/packages/tex.scm (texlive-union): Add texlive-fontname to the default
packages
2017-07-17 14:01:46 +02:00
dea67d8afe
gnu: Add texlive-fontname.
...
* gnu/packages/tex.scm (texlive-fontname): New variable.
2017-07-17 14:01:46 +02:00
2584beaedd
gnu: python-ipython: Use texlive-union.
...
* gnu/packages/python.scm (python-ipython)[native-inputs]: Replace "texlive"
with a texlive-union.
2017-07-17 14:01:46 +02:00
5a1ee7d835
gnu: Add texlive-latex-pstool.
...
* gnu/packages/tex.scm (texlive-latex-pstool): New variable.
2017-07-17 14:00:17 +02:00
f3540dbd47
gnu: Add texlive-latex-trimspaces.
...
* gnu/packages/tex.scm (texlive-latex-trimspaces): New variable.
2017-07-17 14:00:16 +02:00
d770d07fb5
gnu: Add texlive-latex-psfrag.
...
* gnu/packages/tex.scm (texlive-latex-psfrag): New variable.
2017-07-17 14:00:16 +02:00
8c23f238e9
gnu: Add texlive-latex-ifplatform.
...
* gnu/packages/tex.scm (texlive-latex-ifplatform): New variable.
2017-07-17 14:00:16 +02:00
893e3fc1c0
gnu: Add texlive-latex-filemod.
...
* gnu/packages/tex.scm (texlive-latex-filemod): New variable.
2017-07-17 14:00:16 +02:00
74e9c9a463
gnu: Add texlive-latex-environ.
...
* gnu/packages/tex.scm (texlive-latex-environ): New variable.
2017-07-17 14:00:16 +02:00
3236599f50
gnu: Add texlive-latex-bigfoot.
...
* gnu/packages/tex.scm (texlive-latex-bigfoot): New variable.
2017-07-17 14:00:16 +02:00
fedb80ee0e
gnu: Add texlive-generic-pdftex.
...
* gnu/packages/tex.scm (texlive-generic-pdftex): New variable.
2017-07-17 14:00:15 +02:00
63ed869bdd
gnu: Add texlive-latex-wrapfig.
...
* gnu/packages/tex.scm (texlive-latex-wrapfig): New variable.
2017-07-17 14:00:15 +02:00
3966ebbbe7
gnu: Add texlive-latex-varwidth.
...
* gnu/packages/tex.scm (texlive-latex-varwidth): New variable.
2017-07-17 14:00:15 +02:00
e3088297f1
gnu: Add texlive-latex-threeparttable.
...
* gnu/packages/tex.scm (texlive-latex-threeparttable): New variable.
2017-07-17 14:00:15 +02:00
c73d0e9d5e
gnu: Add texlive-latex-tabulary.
...
* gnu/packages/tex.scm (texlive-latex-tabulary): New variable.
2017-07-17 14:00:15 +02:00
e0d307d154
gnu: Add texlive-latex-parskip.
...
* gnu/packages/tex.scm (texlive-latex-parskip): New variable.
2017-07-17 14:00:15 +02:00
0de81b09a9
gnu: Add texlive-latex-upquote.
...
* gnu/packages/tex.scm (texlive-latex-upquote): New variable.
2017-07-17 14:00:14 +02:00
d48091bed0
gnu: Add texlive-latex-mdwtools.
...
* gnu/packages/tex.scm (texlive-latex-mdwtools): New variable.
2017-07-17 14:00:14 +02:00
ef1e2ef07b
gnu: Add texlive-latex-framed.
...
* gnu/packages/tex.scm (texlive-latex-framed): New variable.
2017-07-17 14:00:14 +02:00
a8ac7c0bb4
gnu: Add texlive-latex-etoolbox.
...
* gnu/packages/tex.scm (texlive-latex-etoolbox): New variable.
2017-07-17 14:00:14 +02:00
7709d4d86a
gnu: Add texlive-latex-capt-of.
...
* gnu/packages/tex.scm (texlive-latex-capt-of): New variable.
2017-07-17 14:00:14 +02:00
dcc8af4a64
gnu: texlive-latex-babel: Install to generic/babel.
...
* gnu/packages/tex.scm (texlive-latex-babel)[arguments]: Change tex-directory
to install to the "generic" tree.
2017-07-17 14:00:14 +02:00
d9d44e84f6
gnu: texlive-union: Add texlive-generic-babel-english to defaults.
...
* gnu/packages/tex.scm (texlive-union): Add "texlive-generic-babel-english" to
the default inputs.
2017-07-17 14:00:14 +02:00
876a198058
gnu: Add texlive-generic-babel-english.
...
* gnu/packages/tex.scm (texlive-generic-babel-english): New variable.
2017-07-17 14:00:13 +02:00
fedd77c102
gnu: Add texlive-latex-cmap.
...
* gnu/packages/tex.scm (texlive-latex-cmap): New variable.
2017-07-17 14:00:13 +02:00
17dce7e5d6
gnu: Add texlive-latex-fncychap.
...
* gnu/packages/tex.scm (texlive-latex-fncychap): New variable.
2017-07-17 14:00:13 +02:00
32e623d0d7
gnu: Add texlive-latex-expdlist.
...
* gnu/packages/tex.scm (texlive-latex-expdlist): New variable.
2017-07-17 14:00:13 +02:00
adfa7a2a8e
gnu: Add texlive-latex-eqparbox.
...
* gnu/packages/tex.scm (texlive-latex-eqparbox): New variable.
2017-07-17 14:00:13 +02:00
de224adba7
gnu: Add texlive-latex-draftwatermark.
...
* gnu/packages/tex.scm (texlive-latex-draftwatermark): New variable.
2017-07-17 14:00:13 +02:00
7cda03bd87
gnu: Add texlive-latex-dinbrief.
...
* gnu/packages/tex.scm (texlive-latex-dinbrief): New variable.
2017-07-17 14:00:12 +02:00
8e732b4994
gnu: Add texlive-latex-blindtext.
...
* gnu/packages/tex.scm (texlive-latex-blindtext): New variable.
2017-07-17 14:00:12 +02:00
80bf1f2138
gnu: Add texlive-latex-polyglossia.
...
* gnu/packages/tex.scm (texlive-latex-polyglossia): New variable.
2017-07-17 14:00:12 +02:00
84f8035a62
gnu: Add texlive-latex-supertabular.
...
* gnu/packages/tex.scm (texlive-latex-supertabular): New variable.
2017-07-17 14:00:12 +02:00
f47d1a52e4
gnu: Add texlive-latex-geometry.
...
* gnu/packages/tex.scm (texlive-latex-geometry): New variable.
2017-07-17 14:00:12 +02:00
5f691e2e8f
gnu: Add texlive-latex-gcite.
...
* gnu/packages/tex.scm (texlive-latex-gcite): New variable.
2017-07-17 14:00:12 +02:00
9b4d5c09ab
gnu: Add texlive-latex-galois.
...
* gnu/packages/tex.scm (texlive-latex-galois): New variable.
2017-07-17 14:00:12 +02:00
588b5e9611
gnu: Add texlive-latex-g-brief.
...
* gnu/packages/tex.scm (texlive-latex-g-brief): New variable.
2017-07-17 14:00:11 +02:00
60b5e228c4
gnu: Add texlive-latex-amsrefs.
...
* gnu/packages/tex.scm (texlive-latex-amsrefs): New variable.
2017-07-17 14:00:11 +02:00
87b4360ee8
gnu: Add texlive-latex-acronym.
...
* gnu/packages/tex.scm (texlive-latex-acronym): New variable.
2017-07-17 14:00:11 +02:00
86af0f2a34
gnu: Add texlive-latex-preview.
...
* gnu/packages/tex.scm (texlive-latex-preview): New variable.
2017-07-17 14:00:11 +02:00
c178ffcaf2
gnu: Add texlive-latex-ucs.
...
* gnu/packages/tex.scm (texlive-latex-ucs): New variable.
2017-07-17 14:00:11 +02:00
b167937900
gnu: Add emacs-org-pomodoro.
...
* gnu/packages/emacs.scm (emacs-org-pomodoro): New variable.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2017-07-17 14:59:52 +05:30
f38d54f0ce
gnu: Add python-ruamel.yaml.
...
* gnu/packages/serialization.scm (python-ruamel.yaml, python2-ruamel.yaml): New variables.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-07-16 22:32:06 +02:00
188ba38e85
gnu: libsodium: Update to 1.0.13.
...
* gnu/packages/crypto.scm (libsodium): Update to 1.0.13.
2017-07-16 22:13:01 +02:00
657f18158b
gnu: nzbget: Update to 19.1.
...
* gnu/packages/networking.scm (nzbget): Update to 19.1.
[source]: Fix building with gnutls in a snippet.
[arguments]: Fix indentation.
2017-07-16 08:49:23 +02:00
a2dd927091
gnu: par2cmdline: Fix typo.
...
* gnu/packages/backup.scm (par2cmdline)[description]: Fix typo only visible
on white backgrounds. Use less ambiguous word.
2017-07-16 06:49:25 +02:00
f6d59ecf92
gnu: par2cmdline: Improve synopsis & description.
...
* gnu/packages/backup.scm (par2cmdline)[synopsis, description]: Fix a typo,
end up re-writing most of it.
2017-07-16 06:45:06 +02:00
0d200e9f3f
gnu: par2cmdline: Update to 0.7.3.
...
* gnu/packages/backup.scm (par2cmdline): Update to 0.7.3.
2017-07-16 06:45:06 +02:00
b21ceaafab
gnu: tiled: Update to 1.0.2.
...
* gnu/packages/game-development.scm (tiled): Update to 1.0.2.
2017-07-16 06:45:06 +02:00
29d432a7ad
gnu: youtube-dl: Update to 2017.07.15.
...
* gnu/packages/video.scm (youtube-dl): Update to 2017.07.15.
2017-07-16 06:45:06 +02:00
ec6ea0fea2
gnu: linux-libre: Update to 4.12.2.
...
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.2.
(%linux-libre-hash): Update hash.
2017-07-15 22:32:44 -04:00
0b990b9611
gnu: linux-libre@4.9: Update to 4.9.38.
...
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.38.
2017-07-15 22:32:09 -04:00
6adf9d18d1
gnu: linux-libre@4.4: Update to 4.4.77.
...
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.77.
2017-07-15 22:31:31 -04:00
d5b357ec43
gnu: shntool: Improve description.
...
* gnu/packages/audio.scm (shntool)[description]: Mention support for CUE files.
2017-07-15 20:50:48 -04:00
e39aae4fa9
gnu: python-mutagen: Update to 1.38.
...
* gnu/packages/music.scm (python-mutagen, python2-mutagen): Update to 1.38.
2017-07-15 15:30:01 -04:00
5d4a8f9b9e
gnu: Add lxc.
...
* gnu/packages/virtualization.scm (lxc): New package.
2017-07-15 19:17:37 +08:00
59132b8000
gnu: Rename (gnu packages qemu) to (gnu packages virtualization).
...
* gnu/packages/qemu.scm: Rename this ...
* gnu/packages/virtualization.scm: ... to this.
* gnu/local.mk (GNU_SYSTEM_MODULES),
gnu/packages/bootloaders.scm, gnu/packages/debug.scm,
gnu/packages/gnome.scm, gnu/system/vm.scm,
gnu/tests/install.scm: Adjust accordingly.
2017-07-15 19:17:37 +08:00
8d858010b3
bootloader: Add u-boot.
...
* gnu/bootloader/u-boot.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi: Document it.
2017-07-15 12:53:37 +02:00
c3b5b1bb49
gnu: python-internetarchive: Heed disabled test suite.
...
* gnu/packages/web.scm (python-internetarchive)[arguments]: Heed disable test
suite.
2017-07-15 12:48:24 +02:00
95c36822e8
gnu: Add python-internetarchive.
...
* gnu/packages/web.scm (python-internetarchive, python2-internetarchive):
New variable.
2017-07-15 11:58:19 +02:00
a12b30a05a
gnu: Add python-pytest-capturelog.
...
* gnu/packages/python.scm (python-pytest-capturelog,
python2-pytest-capturelog): New variables.
2017-07-15 11:46:18 +02:00
841e59083d
gnu: Add python-jsonpatch.
...
* gnu/packages/python.scm (python-jsonpatch, python2-jsonpatch,
python-jsonpatch-0.4, python2-jsonpatch-0.4): New variables.
2017-07-15 10:51:34 +02:00
4ff9e8685f
gnu: Add python-backports-csv.
...
* gnu/packages/python.scm (python-backports-csv, python2-backports-csv):
New variables.
2017-07-15 10:45:14 +02:00
7734ed7af7
gnu: Add python-schema.
...
* gnu/packages/python.scm (python-schema, python2-schema, python-schema-0.5,
python2-schema-0.5): New variables.
2017-07-15 10:40:24 +02:00
4d02e9ff90
gnu: Add guile-ncurses-with-gpm.
...
* gnu/packages/guile.scm (guile-ncurses/gpm): New variable.
2017-07-15 10:14:42 +02:00
87ffa416af
gnu: Add ncurses-with-gpm.
...
* gnu/packages/linux.scm (ncurses/gpm): New variable.
2017-07-15 10:14:31 +02:00
da83f0953a
gnu: expat: Update replacement to 2.2.2 [security fixes].
...
See 'Changes' in the source distribution for more information about the
fixed security issues.
* gnu/packages/xml.scm (expat)[replacement]: Update to 2.2.2.
(expat-2.2.1): Replace with ...
(expat-2.2.2): ... new variable.
2017-07-14 15:19:26 -04:00
51ccb1be55
gnu: gstreamer: Update to 1.12.2.
...
* gnu/packages/gstreamer.scm (gstreamer, gst-plugins-base, gst-plugins-good,
gst-plugins-bad, gst-plugins-ugly, gst-libav, python-gst): Update to 1.12.2.
2017-07-14 20:34:01 +02:00
7b323aff14
gnu: neomutt: Update to 20170714.
...
* gnu/packages/mail.scm (neomutt): Update to 20170714.
Signed-off-by: Leo Famulari <leo@famulari.name>
2017-07-14 14:22:50 -04:00
e049372a4a
gnu: yadifa: Re-enable NSID support.
...
* gnu/packages/dns.scm (yadifa)[arguments]: Remove ‘--disable-nsid’
configure flag.
2017-07-14 19:40:16 +02:00
e0d87f8e5a
gnu: yadifa: Update to 2.2.5.
...
* gnu/packages/dns.scm (yadifa): Update to 2.2.5.
[source]: Call the source revision a ‘build’ to match upstream terminology.
2017-07-14 19:40:15 +02:00
a592166505
gnu: knot: Update to 2.5.3.
...
* gnu/packages/dns.scm (knot): Update to 2.5.3.
2017-07-14 19:40:15 +02:00
a2bda5e4e3
gnu: icecat: Add more fixes from upstream mozilla-esr52.
...
* gnu/packages/gnuzilla.scm (icecat)[source]: Add selected fixes from
the upstream mozilla-esr52 repository.
2017-07-14 12:48:14 -04:00
81dfbffc54
gnu: samba: Update to 4.6.6 [fixes CVE-2017-11103].
...
* gnu/packages/samba.scm (samba): Update to 4.6.6.
2017-07-14 10:47:53 -04:00
a08a9b8c38
gnu: certbot, python-acme: Update to 0.16.0.
...
* gnu/pckages/tls.scm (certbot, python-acme, python2-acme): Update to 0.16.0.
2017-07-14 10:47:50 -04:00
06e372360e
gnu: bowtie: Use 'modify-phases'.
...
* gnu/packages/bioinformatics.scm (bowtie)[arguments]: Use 'modify-phases'
syntax.
2017-07-14 19:23:37 +10:00
d6e63cf31c
gnu: bowtie: Update to 2.3.2.
...
* gnu/packages/bioinformatics.scm (bowtie): Update to 2.3.2.
[inputs]: Add zlib.
2017-07-14 18:54:10 +10:00
78a81e37cd
gnu: terminals: Clean up module imports.
...
* gnu/packages/terminals.scm: Remove duplicate module imports and order the
remainder alphabetically.
2017-07-14 09:53:56 +02:00
ng0
Ben Woodcroft
Ryan Moe
Tobias Geerinckx-Rice
Ricardo Wurmus
Mark H Weaver
Marius Bakke
Muriithi Frederick Muriuki
Eric Bavier
Leo Famulari
Mathieu Othacehe
Alex Vong
Arun Isaac
Ludovic Courtès
Oleg Pykhalov
Gábor Boskovits
Theodoros Foradis
Jonathan Brielmaier
Maxim Cournoyer
Efraim Flashner
Jelle Licht
宋文武
Feng Shu
Andy Patterson
Danny Milosavljevic