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301 Commits (a65ce9dd500460af4f97e7398fb35dd817f4c677)

Author SHA1 Message Date
Ricardo Wurmus 2766235f30
gnu: liblantern: Update to 0.9.0.
* gnu/packages/machine-learning.scm (liblantern): Update to 0.9.0.
2022-11-04 10:01:05 +01:00
Ricardo Wurmus 90d7dd1967
gnu: python-pytorch-for-r-torch: Update to 1.12.1.
* gnu/packages/machine-learning.scm (python-pytorch-for-r-torch): Update to
1.12.1.
2022-11-04 10:01:05 +01:00
Vagrant Cascadian bebbf3558f
gnu: Fix various case and whitespace issues in synopsis.
* gnu/packages/kodi.scm (fstrcmp)[synopsis]: Fix case.
* gnu/packages/lisp-xyz.scm (sbcl-cl-form-types)[synopsis]: Fix case.
* gnu/packages/machine-learning.scm (python-torchvision)[synopsis]: Remove
  leading whitespace.
* gnu/packages/networking.scm (lcrq)[synopsis]: Fix case.
  (lcsync)[synopsis]: Likewise.
* gnu/packages/ruby.scm (ruby-mustache)[synopsis]: Fix case.
2022-11-03 18:14:04 -07:00
Ricardo Wurmus 868a1e7f32
gnu: randomjungle: Use older gfortran.
* gnu/packages/machine-learning.scm (randomjungle)[native-inputs]: Use
gfortran-7.
2022-11-02 12:38:10 +01:00
Ricardo Wurmus da5df7970f
gnu: randomjungle: Fix unpack by providing a conventional file name.
* gnu/packages/machine-learning.scm (randomjungle)[source]: Override file name
to avoid an unpack error.
2022-11-02 12:08:10 +01:00
Vagrant Cascadian 15ff5eebb6
gnu: Fix various lint issues in synopsis and descriptions.
* gnu/packages/android.scm (etc1tool)[synopsis]: Drop trailing period.
* gnu/packages/bioinformatics.scm (mudskipper)[synopsis]: Likewise.
* gnu/packages/crates-io.scm (rust-async-log-attributes-1)[synopsis]: Likewise.
  (rust-atomic-polyfill-1)[synopsis]: Likewise.
  (rust-modifier-0.1)[synopsis]: Likewise.
  (rust-openssl-macros-0.1)[synopsis]: Likewise.
  (rust-syn-mid-0.5)[synopsis]: Likewise.
  (rust-toml-edit-0.14)[synopsis]: Likewise.
  (rust-valuable-derive-0.1)[synopsis]: Likewise.
  (rust-inflections-1)[synopsis]: Likewise.
* gnu/packages/databases.scm (python-databases)[synopsis]: Likewise.
* gnu/packages/games.scm (liquidwar6)[synopsis]: Likewise.
* gnu/packages/golang.scm (go-golang.org-x-sync-errgroup)[synopsis]: Likewise.
* gnu/packages/guile-xyz.scm (guile-config)[synopsis]: Likewise.
* gnu/packages/haskell-web.scm (ghc-hxt-xpath)[synopsis]: Likewise.
* gnu/packages/haskell-xyz.scm (ghc-string-qq)[synopsis]: Likewise.
* gnu/packages/machine-learning.scm (python-lap)[synopsis]: Likewise.
  (python-pyro-api)[synopsis]: Likewise.
* gnu/packages/messaging.scm (python-librecaptcha)[synopsis]: Likewise.
* gnu/packages/python-check.scm (python-pytest-cram)[synopsis]: Likewise.
* gnu/packages/python-web.scm (python-jschema-to-python)[synopsis]: Likewise.
  (python-sarif-om)[synopsis]: Likewise.
  (python-socksio)[synopsis]: Likewise.
  (python-msrest)[synopsis]: Likewise.
* gnu/packages/tor.scm (torsocks)[synopsis]: Likewise.
* gnu/packages/cran.scm (r-rlist)[synopsis]: Remove leading article.
* gnu/packages/crates-io.scm (rust-clippy-lints-0.0.153)[synopsis]: Likewise.
  (rust-simplelog-0.11)[synopsis]: Likewise.
* gnu/packages/samba.scm (wsdd)[synopsis]: Likewise.
* gnu/packages/crates-io.scm (rust-spki-0.4)[synopsis]: Remove trailing
  whitespace.
* gnu/packages/golang.scm (go-github-com-mattn-go-zglob)[description]: Remove
  leading whitespace.
* gnu/packages/haskell-check.scm (ghc-crypto-cipher-tests)[description]:
  Likewise.
* gnu/packages/lisp-xyz.scm (sbcl-ctype)[synopsis]: Remove trailing
  whitespace.
* gnu/packages/mpi.scm (openmpi-thread-multiple)[description]: Remove leading
  whitespace.
* gnu/packages/node-xyz.scm (node-string-decoder)[synopsis]: Remove trailing
  whitespace.
2022-10-31 18:13:48 -07:00
Nicolas Graves d5b54e0137
gnu: Add nerd-dictation/wayland.
* gnu/packages/machine-learning.scm (nerd-dictation/wayland): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-10-17 09:47:51 +02:00
Nicolas Graves eecb288ca2
gnu: Add nerd-dictation.
* gnu/packages/machine-learning.scm (nerd-dictation): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-10-17 09:47:49 +02:00
Nicolas Graves a3e20f35f5
gnu: Add python-vosk.
* gnu/packages/machine-learning.scm (python-vosk): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-10-17 09:47:44 +02:00
Nicolas Graves fadfeeede5
gnu: Add vosk-api.
* gnu/packages/machine-learning.scm (vosk-api): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-10-17 09:47:38 +02:00
Nicolas Graves 0c7a2639bb
gnu: Add kaldi-for-vosk.
* gnu/packages/machine-learning.scm (kaldi-for-vosk): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-10-17 09:47:31 +02:00
Nicolas Graves 9ca6416a19
gnu: Add openfst-for-vosk.
* gnu/packages/machine-learning.scm (openfst-for-vosk): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-10-17 09:47:23 +02:00
Ricardo Wurmus f256614891
gnu: guile-aiscm-next: Deprecate in favor of guile-aiscm.
* gnu/packages/machine-learning.scm (guile-aiscm-next): Define as a deprecated
name for guile-aiscm.
2022-09-20 23:57:18 +02:00
Ricardo Wurmus 0d7f2469b5
gnu: guile-aiscm: Update to 0.24.2.
* gnu/packages/machine-learning.scm (guile-aiscm): Update to 0.24.2.
[arguments]: Add configure flags for OpenCV modules; add build phase
'find-clearsilver; adjust phase 'use-llvm-config; add phase
'disable-broken-test.
[inputs]: Add clearsilver, libgc, opencv, and tensorflow; replace ffmpeg with
ffmpeg-4.
[native-inputs]: Add protobuf-c; replace clang-13 and llvm-13 with clang-11
and llvm-11, respectively.
2022-09-20 23:57:18 +02:00
Ricardo Wurmus 2b39d85ac4
gnu: liblantern: Update to 0.8.1.
* gnu/packages/machine-learning.scm (liblantern): Update to 0.8.1.
2022-09-20 17:02:09 +02:00
Ricardo Wurmus 7531efe54d
gnu: liblantern: Do not hardcode Python version.
* gnu/packages/machine-learning.scm (liblantern)[arguments]: Do not hardcode
Python version.
2022-09-20 17:02:09 +02:00
Marius Bakke 883d4e0abf
gnu: python-scikit-learn: Update to 1.1.2.
* gnu/packages/machine-learning.scm (python-scikit-learn): Update to 1.1.2.
2022-09-14 21:08:34 +02:00
Tobias Geerinckx-Rice 5a9c2abf9e
gnu: Remove ‘open source’ from package descriptions.
Also do some (trivial) editing where appropriate.

* gnu/packages/bioconductor.scm (r-anaquin, r-rcppnumerical)
[description]: Remove superfluous ‘open source’.
* gnu/packages/debian.scm (apt-mirror)[description]: Likewise.
Add @acronym{}.  Drop obscure Ubuntu for famous Trisquel.  Reorder.
* gnu/packages/documentation.scm (scrollkeeper)[description]:
Remove superfluous ‘open systems’.  Keep ‘Open Source’ in standard name.
* gnu/packages/engineering.scm (freecad, cura-engine)[description]:
Remove superfluous ‘open source’ and excessive puffery.
* gnu/packages/firmware.scm (make-opensbi-package)
[synopsis]: Remove ‘Open Source’.  Use @acronym{}.
[description]: Fix first sentence to follow guidelines.  Use @acronym{}.
* gnu/packages/game-development.scm (ioquake3, recastnavigation):
[description]: Remove ‘open source’.
* gnu/packages/graphics.scm (skia)[description]: Likewise.
* gnu/packages/lisp-xyz.scm (sbcl-s-sysdeps)[description]: Likewise.
* gnu/packages/machine-learning.scm (onnx)[description]: Likewise.
Use @acronym{}.
* gnu/packages/ocaml.scm (ocaml-cudf)[description]: Likewise.
2022-08-14 02:00:00 +02:00
Ricardo Wurmus 9b1a2dcd5b
gnu: python-umap-learn: Disable unreliable test.
* gnu/packages/machine-learning.scm (python-umap-learn)[arguments]: Disable
test_densmap_trustworthiness_on_iris_supervised.
2022-08-01 12:46:19 +02:00
Ricardo Wurmus a69f2cd076
gnu: python-umap-learn: Set NUMBA_CACHE_DIR.
* gnu/packages/machine-learning.scm (python-umap-learn)[arguments]: Add phase
to set NUMBA_CACHE_DIR.
2022-08-01 12:46:19 +02:00
Ricardo Wurmus 6416e77280
gnu: Add python-pyro-ppl.
* gnu/packages/machine-learning.scm (python-pyro-ppl): New variable.
2022-07-09 10:21:21 +02:00
Ricardo Wurmus ff37afb288
gnu: Add python-visdom.
* gnu/packages/machine-learning.scm (python-visdom): New variable.
2022-07-09 10:21:21 +02:00
Ricardo Wurmus 2cf138db76
gnu: Add python-lap.
* gnu/packages/machine-learning.scm (python-lap): New variable.
2022-07-09 10:21:21 +02:00
Ricardo Wurmus bafa7a00a1
gnu: Add python-pyro-api.
* gnu/packages/machine-learning.scm (python-pyro-api): New variable.
2022-07-08 18:41:35 +02:00
Ricardo Wurmus c6136b48c2
gnu: Add python-torchfile.
* gnu/packages/machine-learning.scm (python-torchfile): New variable.
2022-07-08 18:41:35 +02:00
Ricardo Wurmus ba86c7604d
gnu: python-torchvision: Update to 0.13.0.
* gnu/packages/machine-learning.scm (python-torchvision): Update to 0.13.0.
2022-07-07 14:02:33 +02:00
Ricardo Wurmus deae5d0df1
gnu: python-pytorch: Update to 1.12.0.
* gnu/packages/machine-learning.scm (python-pytorch): Update to 1.12.0.
[arguments]: Explicitly request the use of our pybind11 package.
2022-07-07 14:02:33 +02:00
Ricardo Wurmus 87b43ab562
gnu: xnnpack: Update to 0.0-2.ae108ef.
* gnu/packages/machine-learning.scm (xnnpack): Update to 0.0-2.ae108ef.
* gnu/packages/patches/xnnpack-system-libraries.patch: Update.
2022-07-07 14:02:33 +02:00
Ricardo Wurmus c929619b36
gnu: python-pytorch-for-r-torch: Explicitly keep at 1.11.0.
* gnu/packages/machine-learning.scm (python-pytorch-for-r-torch): Separate
from python-pytorch by overriding version and source.
2022-07-07 14:02:33 +02:00
Ricardo Wurmus 563bb6eab1
gnu: Add python-torchvision.
* gnu/packages/machine-learning.scm (python-torchvision): New variable.
2022-07-06 17:16:15 +02:00
Ludovic Courtès 43cf8861b8
gnu: liblantern: Update to 0.8.0.
* gnu/packages/machine-learning.scm (liblantern): Update to 0.8.0.
2022-07-05 16:56:05 +02:00
Ludovic Courtès 20f55375dc
gnu: python-pytorch: Update to 1.11.0.
* gnu/packages/machine-learning.scm (python-pytorch): Update to 1.11.0.
[source](snippet): Remove now unnecessary "caffe2/onnx/backend.cc"
substitution.
[arguments]: Add 'remove-caffe2-onnx-scripts' phase.
* gnu/packages/patches/python-pytorch-runpath.patch,
gnu/packages/patches/python-pytorch-system-libraries.patch: Update.
2022-07-05 16:56:04 +02:00
Ludovic Courtès b211824f0a
gnu: onnx: Update to 1.12.0.
* gnu/packages/machine-learning.scm (onnx): Update to 1.12.0.
2022-07-05 16:56:04 +02:00
Efraim Flashner 64c043e63a
Merge remote-tracking branch 'origin/master' into staging 2022-06-01 12:42:04 +03:00
Maxim Cournoyer 9a550ba8c9
gnu: Remove python2-autograd.
* gnu/packages/machine-learning.scm (python2-autograd): Delete variable.
2022-05-31 14:52:31 -04:00
Maxim Cournoyer 0837d0aaf1
gnu: Remove python2-fastlmm.
* gnu/packages/machine-learning.scm (python2-fastlmm): Delete variable.
2022-05-31 14:52:25 -04:00
Maxim Cournoyer 1c865e8e1c
gnu: Remove python2-scikit-learn.
* gnu/packages/machine-learning.scm (python2-scikit-learn): Delete variable.
(python-scikit-learn)[properties]: Remove the python2-variant property.
2022-05-31 14:52:24 -04:00
Efraim Flashner e5e0e283ff
Merge branch 'master' into staging 2022-05-16 11:14:42 +03:00
Aurora 7c204281ff
gnu: openfst: Update to 1.8.2, enable ngram extension
This extension is required by some programs that depend on openfst that aren't
yet packaged.

* gnu/packages/machine-learning.scm (openfst): Update to 1.8.2.
[arguments]: New field.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-15 22:49:50 +02:00
Aurora d60b9f8d0f
gnu: openfst-1.7.3: Enable ngram-fst extension & C++14 build
The extension doesn't build in old versions of openfst such as 1.7.3 without
manually setting CXXFLAGS.

This package definition, including this workaround to build extensions
successfully, will need to be removed once kaldi is fixed upstream and can be
used with up-to-date versions of openfst.

* gnu/packages/machine-learning.scm (openfst-1.7.3)[arguments]: New field.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-15 22:49:50 +02:00
Aurora d57a2c2b33
gnu: kaldi: Update to dd107fd, bypass tests
Either kaldi's tests are broken or openblas has reintroduced a bug:
- https://github.com/kaldi-asr/kaldi/pull/4421

More testing & fixes required upstream to re-enable the tests later. For now
they'll just have to be ignored.

* gnu/packages/machine-learning.scm (kaldi): Update to dd107fd.
[arguments]: In 'configure' phase, modify "matrix/Makefile".

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-15 22:49:50 +02:00
Aurora 8c7e4a9698
gnu: openfst: Add 1.7.3 for kaldi
Kaldi is currently broken with openfst versions newer than 1.7.3 as it changed
some of its function signatures.

Once Kaldi is patched/fixed, this should be removed.

Reference Issues:
- https://github.com/kaldi-asr/kaldi/issues/4131
- https://github.com/kaldi-asr/kaldi/issues/4393

* gnu/packages/machine-learning.scm (openfst-1.7.3): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-15 22:49:50 +02:00
Maxim Cournoyer 34106c85d8
gnu: python-umap-learn: Update to 0.5.3.
* gnu/packages/machine-learning.scm (python-umap-learn): Update to 0.5.3.
[source]: Use git.
[arguments]: New field.
[native-inputs]: Delete python-joblib and python-nose.  Add python-pytest.
[propagated-inputs]: Add python-pynndescent and python-tqdm.
[synopsis]: Fix indentation.
[description]: Fix typo and re-indent.
2022-05-12 12:45:55 -04:00
Maxim Cournoyer 06b0512260
gnu: python-pynndescent: Update to 0.5.6.
* gnu/packages/machine-learning.scm (python-pynndescent): Update to 0.5.6.
[phases]{check}: Skip the test_weighted_minkowski test.
[native-inputs, propagated-inputs]: Re-indent.
2022-05-12 12:45:55 -04:00
Maxim Cournoyer 1d1f44b709
gnu: python-scikit-learn: Parallelize build and test suite.
* gnu/packages/machine-learning.scm (python-scikit-learn)
[phases]{configure}: New phase.
{build-ext}: Add '-j' option.
{check}: Add '-n' option.
[native-inputs]: Add python-pytest-xdist.
2022-05-12 12:45:55 -04:00
Efraim Flashner 53a8e8fd6c
gnu: python-hmmlearn: Remove cythonized file.
* gnu/packages/machine-learning.scm (python-hmmlearn)[source]: Add
snippet to remove cythonized file.
2022-04-15 02:11:03 +03:00
Ricardo Wurmus e378e7a855
gnu: liblantern: Update to 0.7.2.
* gnu/packages/machine-learning.scm (liblantern): Update to 0.7.2.
2022-03-15 22:14:39 +01:00
Ricardo Wurmus 95f9c44362
gnu: liblantern: Update to 0.7.0.
* gnu/packages/machine-learning.scm (liblantern): Update to 0.7.0.
2022-03-15 20:18:42 +01:00
Ricardo Wurmus d7636c8bb7
gnu: python-pytorch-for-r-torch: Reuse python-pytorch.
* gnu/packages/machine-learning.scm (python-pytorch-for-r-torch): Use
definition on python-pytorch, thereby updating to 1.10.2.
2022-03-15 20:18:42 +01:00
Ricardo Wurmus 7146e553b9
gnu: Add liblantern.
* gnu/packages/machine-learning.scm (liblantern): New variable.
2022-02-11 15:44:42 +01:00