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114241 Commits (b0a6411b8546ee3f2159253c0a6886ea37c85a47)

Author SHA1 Message Date
Ricardo Wurmus ee4f843e46
gnu: r-bgmix: Update to 1.59.0. 
* gnu/packages/bioconductor.scm (r-bgmix): Update to 1.59.0.
[arguments]: Add build phase 'avoid-naming-conflict.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus e8d5475045
gnu: r-acde: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-acde): Update to 1.30.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 89a1bc74ce
gnu: r-acme: Update to 2.56.0. 
* gnu/packages/bioconductor.scm (r-acme): Update to 2.56.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus f09fd77618
gnu: r-acgh: Update to 1.78.0. 
* gnu/packages/bioconductor.scm (r-acgh): Update to 1.78.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 9b4ebaec75
gnu: r-ace: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-ace): Update to 1.18.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus b212b9ca62
gnu: r-universalmotif: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.18.0.
[propagated-inputs]: Add r-matrixgenerics.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 47b35d3459
gnu: r-unifiedwmwqpcr: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-unifiedwmwqpcr): Update to 1.36.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus f7c2c248d5
gnu: r-htqpcr: Update to 1.54.0. 
* gnu/packages/bioconductor.scm (r-htqpcr): Update to 1.54.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus b352e03d83
gnu: r-variancepartition: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.30.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus c1b48012e6
gnu: r-variantfiltering: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-variantfiltering): Update to 1.36.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 9340b270f7
gnu: r-tilingarray: Update to 1.78.0. 
* gnu/packages/bioconductor.scm (r-tilingarray): Update to 1.78.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus d04f67f677
gnu: r-wavcluster: Update to 2.34.0. 
* gnu/packages/bioconductor.scm (r-wavcluster): Update to 2.34.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 77d55ff8e6
gnu: r-reqon: Update to 1.46.0. 
* gnu/packages/bioconductor.scm (r-reqon): Update to 1.46.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 5d99ad4da4
gnu: r-seqbias: Update to 1.48.0. 
* gnu/packages/bioconductor.scm (r-seqbias): Update to 1.48.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 3dd7d3bf9e
gnu: r-bigmelon: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-bigmelon): Update to 1.26.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 2d821f86cb
gnu: r-gdsfmt: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.36.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 217c1275ac
gnu: r-watermelon: Update to 2.6.0. 
* gnu/packages/bioconductor.scm (r-watermelon): Update to 2.6.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 69ed0c145f
gnu: r-roc: Update to 1.76.0. 
* gnu/packages/bioconductor.scm (r-roc): Update to 1.76.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 733b8a2e0d
gnu: r-genie3: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-genie3): Update to 1.22.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus a6361a752d
gnu: r-circrnaprofiler: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-circrnaprofiler): Update to 1.14.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 52fd33e996
gnu: r-cicero: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-cicero): Update to 1.18.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 3481a56a13
gnu: r-chicago: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-chicago): Update to 1.28.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 44aeef066d
gnu: r-rcistarget: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-rcistarget): Update to 1.20.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus c5aba0be7c
gnu: r-depecher: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-depecher): Update to 1.16.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 043d2dd022
gnu: r-mixomics: Update to 6.24.0. 
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.24.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus afb011a051
gnu: r-flowsom: Update to 2.8.0. 
* gnu/packages/bioconductor.scm (r-flowsom): Update to 2.8.0.
[propagated-inputs]: Remove r-cytoml, r-flowworkspace, r-ggpointdensity, r-ggrepel,
r-pheatmap, r-rcolorbrewer, and r-scattermore.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 974dba4509
gnu: r-cytoml: Update to 2.12.0. 
* gnu/packages/bioconductor.scm (r-cytoml): Update to 2.12.0.
[inputs]: Remove zlib.
[propagated-inputs]: Remove r-base64enc, r-corpcor, r-lattice, r-plyr, r-rcpp,
r-rcpparmadillo, r-rcppparallel, r-runit, and r-xml2; add r-cpp11.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 43b33d7992
gnu: r-opencyto: Update to 2.12.0. 
* gnu/packages/bioconductor.scm (r-opencyto): Update to 2.12.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus fadfa9cc60
gnu: r-flowstats: Update to 4.12.0. 
* gnu/packages/bioconductor.scm (r-flowstats): Update to 4.12.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus c31ae38d58
gnu: r-flowworkspace: Update to 4.12.0. 
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.12.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 2cf5e0cb7a
gnu: r-rprotobuflib: Update to 2.12.0. 
* gnu/packages/bioconductor.scm (r-rprotobuflib): Update to 2.12.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 9eade45bfb
gnu: r-flowclust: Update to 3.38.0. 
* gnu/packages/bioconductor.scm (r-flowclust): Update to 3.38.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus ea4adaa7e8
gnu: r-flowviz: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-flowviz): Update to 1.64.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus c83337a943
gnu: r-ggcyto: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-ggcyto): Update to 1.28.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 557cbfd68c
gnu: r-ncdfflow: Update to 2.46.0. 
* gnu/packages/bioconductor.scm (r-ncdfflow): Update to 2.46.0.
[propagated-inputs]: Remove r-rcpp and r-rcpparmadillo; add r-cpp11.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus e346747a7b
gnu: r-flowmeans: Update to 1.60.0. 
* gnu/packages/bioconductor.scm (r-flowmeans): Update to 1.60.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 0b653ec7f9
gnu: r-flowcore: Update to 2.12.0. 
* gnu/packages/bioconductor.scm (r-flowcore): Update to 2.12.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 643bf1a6c7
gnu: r-cytolib: Update to 2.12.0. 
* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.12.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus bff572d037
gnu: r-consensusclusterplus: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-consensusclusterplus): Update to 1.64.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 52719d2995
gnu: r-flowai: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-flowai): Update to 1.30.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus f730a027c8
gnu: r-rsubread: Update to 2.14.0. 
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.14.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus ec0fc09a26
gnu: r-annotatr: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-annotatr): Update to 1.26.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 96ae714e28
gnu: r-biosigner: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-biosigner): Update to 1.28.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus bd322e08de
gnu: r-ropls: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-ropls): Update to 1.32.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 74591bcb64
gnu: r-multidataset: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-multidataset): Update to 1.28.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus addd78c953
gnu: r-birewire: Update to 3.32.0. 
* gnu/packages/bioconductor.scm (r-birewire): Update to 3.32.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 29649ada9e
gnu: r-rqc: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-rqc): Update to 1.34.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 8d3676e217
gnu: r-quasr: Update to 1.40.0. 
* gnu/packages/bioconductor.scm (r-quasr): Update to 1.40.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus b8c4548ac0
gnu: r-rhisat2: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-rhisat2): Update to 1.16.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 3a2a833691
gnu: r-sgseq: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-sgseq): Update to 1.34.0.
 2023-04-29 20:28:02 +02:00