7c033c4627
gnu: Add ruby-systemu.
...
* gnu/packages/ruby.scm (ruby-systemu): New variable.
2016-01-14 07:51:44 +10:00
ca7ef4d418
gnu: cross-gcc-arguments: Enable C++, disable building of libstdc++-v3.
...
* gnu/packages/cross-base.scm (cross-gcc-arguments)[arguments]: Disable
building libstdc++-v3 and enable building C++ compiler.
2016-01-13 22:32:37 +01:00
724eaef1b2
tests: Use sed instead of grep as a package with no dependencies.
...
* tests/graph.scm ("node-edges"): Choose SED instead of GREP as the
example.
2016-01-13 18:19:01 +01:00
8c986ab120
Merge branch 'master' into core-updates
2016-01-13 18:18:48 +01:00
7a2eed3aac
hydra: Add missing phase and inputs for 'make dist' job.
...
* build-aux/hydra/guix.scm (tarball-package): Inherit from 'guix-devel'
rather than 'guix'. Pass #:phases to 'dist-package'.
2016-01-13 17:43:21 +01:00
b8a35309f8
build-system/gnu: 'dist-package' can be passed the phases.
...
* guix/build-system/gnu.scm (dist-package): Add #:phases parameter and
honor it.
2016-01-13 17:43:21 +01:00
8c9ef2c3a2
monad-repl: Close connection when leaving the monad REPL.
...
* guix/monad-repl.scm (store-monad-language): Add 'store' parameter and
use it. Remove call to 'open-connection'.
(enter-store-monad): Use 'with-store' and pass the store to
'store-monad-language.
2016-01-13 17:43:21 +01:00
e5a19fed19
gnu: julia: Update to 0.4.3.
...
* gnu/packages/julia.scm (julia): Update to 0.4.3.
(libuv-julia): Update to 07730c4bd595.
2016-01-13 17:05:38 +01:00
6d268e5281
emacs: Move loading packages to "guix-emacs.el".
...
* emacs/guix-init.el: Move the code for auto-loading Emacs packages to...
(guix-package-enable-at-startup): Move to...
* emacs/guix-emacs.el (guix-package-enable-at-startup): ... here.
2016-01-13 17:56:14 +03:00
e4e2154644
emacs: Make "guix-emacs.el" independent.
...
"guix-emacs.el" may be used just for "instructing" Emacs where to find
Emacs packages installed with Guix, so it should have as few
dependencies as possible.
See <http://lists.gnu.org/archive/html/guix-devel/2016-01/msg00022.html >.
* emacs/guix-emacs.el: Require 'guix-profiles' optionally.
(guix-emacs-load-autoloads): Use 'guix-profile-prompt' only if it is
available.
2016-01-13 17:56:14 +03:00
08207339aa
emacs: Complete --file in 'guix build' popup.
...
* emacs/guix-command.el (guix-command-improve-build-argument): Use
'guix-read-file-name' to complete --file option.
2016-01-13 17:55:47 +03:00
883fc5ed42
emacs: Add missing shell completions.
...
* emacs/guix-pcomplete.el (guix-pcomplete-complete-option-arg): Complete
file name for '--install-from-file' option of 'guix package' command,
and for '--file' and '--with-source' options of 'guix build' command.
2016-01-13 17:55:47 +03:00
75418ae0fd
gnu: isc-dhcp: Update to 4.3.3-P1 [fixes CVE-2015-8605].
...
* gnu/packages/admin.scm (isc-dhcp): Update to 4.3.3-P1.
2016-01-13 09:38:57 -05:00
c44734115a
gnu: samtools: Update to 1.3.
...
* gnu/packages/bioinformatics.scm (samtools): Update to 1.3.
[arguments]: Enable tests for all architectures; set ncurses in
configure-flags instead of make-flags; simplify "patch-tests" phase;
restore "configure" phase.
2016-01-13 15:12:22 +01:00
93ce8a8e00
build: Use 127 as the Linux hash-bang limit.
...
Reported by taylanbayirli@gmail.com (Taylan Ulrich Bayırlı/Kammer).
* m4/guix.m4 (LINUX_HASH_BANG_LIMIT): Set to 127.
2016-01-13 11:13:34 +01:00
98f2339189
gnu: skribilo: Update to 0.9.3.
...
* gnu/packages/skribilo.scm (skribilo): Update to 0.9.3.
[native-inputs]: New field.
2016-01-13 11:13:34 +01:00
0917e80ea8
doc: Fix typo in "Build Systems".
...
* doc/guix.texi (Build Systems): Remove extra 's'.
2016-01-12 17:55:59 -05:00
c91d3fb7f4
gnu: boost: Update to 1.60.0.
...
* gnu/packages/boost.scm (boost): Update to 1.60.0.
[source]: Remove patch.
* gnu/packages/patches/boost-mips-avoid-m32.patch: Delete patch
* gnu-system.am (dist_patch_DATA): Remove patch.
Also fix dependent packages:
* gnu/packages/patches/csound-header-ordering.patch: New patch.
* gnu/packages/audio.scm (csound)[source]: Use it.
[arguments]: Add 'set-flags phase.
* gnu/packages/patches/libcmis-fix-test-onedrive.patch: New patch.
* gnu/packages/libreoffice.scm (libcmis)[source]: Use it.
(libreoffice)[arguments]: Add LDFLAGS to #:configure-flags.
(librevenge)[inputs]: Move boost from here...
[propogated-inputs]: to here.
[arguments]: Add LDFLAGS to #:configure-flags.
* gnu/packages/patches/openimageio-boost-1.60.patch: New patch.
* gnu/packages/graphics.scm (openimageio): Use it.
* gnu-system.am (dist_patch_DATA): Add patches.
2016-01-12 21:07:53 +01:00
3abe8136fd
gnu: boost: Use modify-phases.
...
* gnu/packages/boost.scm (boost)[arguments]: Use modify-phases.
2016-01-12 20:53:14 +01:00
203795acea
gnu: perl: Add fix for CVE-2015-8607.
...
* gnu/packages/patches/perl-CVE-2015-8607.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/perl.scm (perl)[source]: Add patch.
2016-01-12 13:12:07 -05:00
ce3ac6670c
gnu: perl: Update to 5.22.1.
...
* gnu/packages/perl.scm (perl): Update to 5.22.1.
2016-01-12 13:10:05 -05:00
bb25130764
build: 'make check' errors out if file name limits would be hit.
...
* Makefile.am (SCM_TESTS, SH_TESTS, TESTS, AM_TESTS_ENVIRONMENT)
(SCM_LOG_COMPILER, SH_LOG_COMPILER, AM_SCM_LOG_FLAGS)
(AM_SH_LOG_FLAGS): Move within 'if CAN_RUN_TESTS'.
(check-local) [!CAN_RUN_TESTS]: New target.
* daemon.am (AM_TESTS_ENVIRONMENT, TESTS): Ditto.
* m4/guix.m4 (GUIX_CHECK_FILE_NAME_LIMITS): Add parameter and set it.
2016-01-12 17:47:36 +01:00
27ab3cee75
build: Warn against long hash bang lines for tests.
...
* m4/guix.m4 (GUIX_TEST_HASH_BANG_LENGTH): New macro.
(GUIX_CHECK_FILE_NAME_LIMITS): Use it. Warn against long hash bang
lines in tests.
2016-01-12 17:47:36 +01:00
d33fa0c714
doc: Show bootstrapping at the package level.
...
* doc/images/bootstrap-packages.dot: New file.
* doc.am (DOT_FILES): Add it.
* doc/guix.texi (Bootstrapping): Show 'guix graph' commands. Includes
'images/bootstrap-packages' and comment it.
2016-01-12 17:47:36 +01:00
16aa649117
gnu: sudo: Add fix for CVE-2015-5602.
...
* gnu/packages/patches/sudo-CVE-2015-5602.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/admin.scm (sudo)[source]: Add patch.
2016-01-12 11:23:06 -05:00
9d9951d6a6
gnu: global: Use modify-phases syntax.
...
* gnu/packages/code.scm (global)[arguments]: Use modify-phases syntax.
2016-01-12 14:47:10 +02:00
94c3a6f1a6
gnu: global: Update to 6.5.2.
...
* gnu/packages/code.scm (global): Update to 6.5.2.
2016-01-12 14:39:15 +02:00
9f40b1171b
gnu: icedtea-6: Fix directory name in "unpack" phase.
...
* gnu/packages/java.scm (icedtea-6)[arguments]: Change the directory
prefix in the "unpack" phase to "icedtea6-".
2016-01-12 11:39:21 +01:00
6b0d24b17c
gnu: linux-libre: Update to 4.4.
...
* gnu/packages/linux.scm (linux-libre): Update to 4.4.
* gnu/packages/linux-libre-i686.conf,
gnu/packages/linux-libre-x86_64.conf: Update from
<https://jxself.org/git/kernel-configs.git >.
2016-01-11 19:13:37 -05:00
81f3e0c1f3
gnu: Add fxtract.
...
* gnu/packages/bioinformatics.scm (fxtract): New variable.
2016-01-12 07:49:19 +10:00
65e84e3176
gnu: ruby: Update to 2.3.0.
...
* gnu/packages/ruby.scm (ruby): Update to 2.3.0.
[source]: Remove bundled libffi.
[arguments]: Use parallel tests.
(ruby-2.2): New variable.
2016-01-11 21:59:06 +10:00
9656b8bec5
gnu: ruby: Use modify-phases.
...
* gnu/packages/ruby.scm (ruby)[arguments]: Use modify-phases.
2016-01-11 21:59:06 +10:00
761e7042f6
ruby: Abstract out path to GEM_HOME.
...
Previously paths to the GEM_HOME of certain Ruby packages were
hard-coded, so packages failed to build when Ruby was updated to 2.3.0.
* guix/build/ruby-build-system.scm (gem-home): New procedure.
* gnu/packages/ruby.scm (ruby-metaclass, ruby-instantiator,
ruby-introspection, ruby-mocha, ruby-minitest-tu-shim): Use it.
2016-01-11 21:58:55 +10:00
ec70fec559
gnu: youtube-dl: Update to 2016.01.09.
...
* gnu/packages/video.scm (youtube-dl): Update to 2016.01.09.
2016-01-11 13:30:50 +02:00
4879d2ff66
gnu: gp2c: Update to 0.0.9pl5.
...
* gnu/packages/algebra.scm (gp2c): Update to 0.0.9pl5.
2016-01-11 11:24:52 +01:00
4a6635f353
gnu: texlive: Use modify-phases syntax.
...
* gnu/packages/texlive.scm (texlive-bin, texlive-texmf): Use modify-phases
syntax.
2016-01-11 10:59:29 +01:00
a916c82649
gnu: man-pages: Update to 4.04.
...
* gnu/packages/man.scm (man-pages): Update to 4.04.
[source]: Add alternate location.
2016-01-11 09:37:50 +02:00
ce9a304251
build: Fix out-of-tree building of documentation.
...
* doc.am (.dot.png, .dot.pdf, .dot.eps): Put the generated files into
$(srcdir).
2016-01-10 22:30:29 +01:00
9b9b7ffd8e
gnu: bedtools: Update to 2.25.0.
...
* gnu/packages/bioinformatics.scm (bedtools): Update to 0.25.0.
[source]: Remove patch merged upstream.
[arguments]: Use 'modify-phases'. Remove
'patch-makefile-SHELL-definition' phase.
* gnu/packages/patches/bedtools-32bit-compilation.patch: Remove file.
* gnu-system.am (dist_patch_DATA): Remove it.
2016-01-11 00:36:13 +10:00
6573ac82ad
gnu: bedtools: Use modify-phases.
...
* gnu/packages/bioinformatics.scm (bedtools)[arguments]: Use modify-phases.
2016-01-11 00:36:13 +10:00
048036aee5
gnu: ruby-yard: Disable failing test.
...
* gnu/packages/ruby.scm (ruby-yard)[arguments]: Disable test which fails on
Ruby 2.3.0.
2016-01-10 21:10:29 +10:00
3918146b61
gnu: ruby-power-assert: Update to 0.2.7.
...
* gnu/packages/ruby.scm (ruby-power-assert): Update to 0.2.7.
2016-01-10 21:09:37 +10:00
695bea9803
gnu: r: Update to 3.2.3.
...
* gnu/packages/statistics.scm (r): Update to 3.2.3.
2016-01-09 23:18:28 +01:00
13035f5a03
gnu: icecat: Update to 38.5.2-gnu1.
...
* gnu/packages/gnuzilla.scm (icecat): Update to 38.5.2-gnu1.
2016-01-09 22:51:28 +01:00
4c40fa0229
gnu: ruby-2.1: Update to 2.1.8.
...
* gnu/packages/ruby.scm (ruby-2.1): Update to 2.1.8.
2016-01-09 14:53:58 +10:00
f32274a71e
gnu: i2c-tools: Update source and home-page URLs.
...
* gnu/packages/linux.scm (i2c-tools)[source]: Update URL.
[home-page]: Update URL.
2016-01-08 16:42:27 -05:00
3a04d5d4e4
gnu: lm-sensors: Update source and home-page URLs.
...
* gnu/packages/linux.scm (lm-sensors)[source]: Update URL.
[home-page]: Update URL.
2016-01-08 16:42:27 -05:00
bea25ae83c
gnu: nss: Update to 3.21 [fixes CVE-2015-7575].
...
* gnu/packages/gnuzilla.scm (nss): Update to 3.21.
[arguments]: In configure phase, setenv CC=gcc.
* gnu/packages/patches/nss-pkgconfig.patch: Adapt to NSS 3.21.
2016-01-08 15:29:50 -05:00
17ad0a2714
build-system/python: 'pypi-uri' takes an optional file name extension.
...
Suggested by swedebugia <swedebugia@riseup.net>.
* guix/build-system/python.scm (pypi-uri): Add 'extension' parameter and
use it.
2016-01-08 19:06:26 +01:00
195f557ed5
gnu: attr: Update to 2.4.47.
...
* gnu/packages/attr.scm (attr): Update to 2.4.47.
2016-01-08 16:45:32 +01:00
Ben Woodcroft
Ricardo Wurmus
Ludovic Courtès
Ricardo Wurmus
Alex Kost
Mark H Weaver
Leo Famulari
Eric Bavier
Efraim Flashner
Andreas Enge
Taylan Ulrich Bayırlı/Kammer