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63462 Commits (bcdacb0072a7666e2c6d440f90aa3c8503afb0ed)

Author SHA1 Message Date
Mathieu Othacehe d3eee3c064
gnu: guix: Update to 1.1.0-15.03deb1e.
* gnu/packages/package-management.scm (guix): Update to 1.1.0-15.03deb1e.
2020-07-02 13:19:30 +02:00
Mathieu Othacehe 6c59eb1da2
Revert "gnu: guix-minimal: Remove as failing and unused."
This reverts commit 044cffdf34.
2020-07-02 13:19:30 +02:00
Mathieu Othacehe 214874e820
Fix build without SSH support.
* gnu/local.mk (GNU_SYSTEM_MODULES): Only include
gnu/machine/digital-ocean.scm and gnu/machine/ssh.scm if HAVE_GUILE_SSH is
set.
2020-07-02 13:19:30 +02:00
Ricardo Wurmus 4be969fb7e
gnu: r-mnormt: Update to 2.0.1.
* gnu/packages/statistics.scm (r-mnormt): Update to 2.0.1.
2020-07-02 12:45:57 +02:00
Ricardo Wurmus 3c45241274
gnu: r-mda: Update to 0.5-2.
* gnu/packages/cran.scm (r-mda): Update to 0.5-2.
2020-07-02 12:45:56 +02:00
Ricardo Wurmus 80897f9622
gnu: r-ingredients: Update to 1.3.0.
* gnu/packages/cran.scm (r-ingredients): Update to 1.3.0.
2020-07-02 12:45:56 +02:00
Ricardo Wurmus 53ea4ae4ce
gnu: r-spdep: Update to 1.1-5.
* gnu/packages/cran.scm (r-spdep): Update to 1.1-5.
[native-inputs]: Add r-knitr.
2020-07-02 12:45:56 +02:00
Ricardo Wurmus 1a4f3739fa
gnu: r-blockmodeling: Update to 1.0.0.
* gnu/packages/cran.scm (r-blockmodeling): Update to 1.0.0.
2020-07-02 12:45:56 +02:00
Ricardo Wurmus f74542782b
gnu: r-future-apply: Update to 1.6.0.
* gnu/packages/cran.scm (r-future-apply): Update to 1.6.0.
2020-07-02 12:45:56 +02:00
Ricardo Wurmus aa9cd2d4a3
gnu: r-fs: Update to 1.4.2.
* gnu/packages/cran.scm (r-fs): Update to 1.4.2.
2020-07-02 12:45:56 +02:00
Ricardo Wurmus ddff76aae0
gnu: r-rdpack: Update to 1.0.0.
* gnu/packages/cran.scm (r-rdpack): Update to 1.0.0.
2020-07-02 12:45:56 +02:00
Ricardo Wurmus bd978be3ae
gnu: r-annotationdbi: Update to 1.50.1.
* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.50.1.
2020-07-02 12:45:53 +02:00
Nicolas Goaziou 95ccca19df
gnu: python-folium: Update to 0.11.0.
* gnu/packages/python-xyz.scm (python-folium): Update to 0.11.0.
2020-07-02 12:12:54 +02:00
Nicolas Goaziou dba255c033
gnu: wireshark: Update to 3.2.5.
* gnu/packages/networking.scm (wireshark): Update to 3.2.5.
2020-07-02 12:10:09 +02:00
Nicolas Goaziou 7e97137734
gnu: emacs-tramp: Update to 2.4.4.
* gnu/packages/emacs-xyz.scm (emacs-tramp): Update to 2.4.4.
2020-07-02 12:09:48 +02:00
Efraim Flashner f1f7054bb2
gnu: rust-bumpalo-2: Update to 2.6.0.
* gnu/packages/crates-io.scm (rust-bumpalo-2): Update to 2.6.0.
[arguments]: Don't skip build. Skip tests.
2020-07-02 12:25:23 +03:00
Efraim Flashner 502590f45a
gnu: rust-bumpalo-2.5: Rename to rust-bumpalo-2.
* gnu/packages/crates-io.scm (rust-bumpalo-2.5): Rename to ...
(rust-bumpalo-2): ... this.
2020-07-02 12:25:23 +03:00
Efraim Flashner 4ca62836a2
gnu: rust-crossbeam-utils-0.6: Update to 0.6.6.
* gnu/packages/crates-io.scm (rust-crossbeam-utils-0.6): Update to0.6.6.
[arguments]: Don't skip build. Replace rust-rand-0.4 with 0.6 in
cargo-development-inputs.
2020-07-02 12:25:23 +03:00
Efraim Flashner d636d5b46d
gnu: rust-crossbeam-queue-0.1: Don't skip build.
* gnu/packages/crates-io.scm (rust-crossbeam-queue-0.1[arguments]: Don't
skip build. Replace rust-rand-0.4 with 0.6 in cargo-development-inputs.
2020-07-02 12:25:08 +03:00
Efraim Flashner f8f61451fa
gnu: rust-crossbeam-epoch-0.7: Update to 0.7.2.
* gnu/packages/crates-io.scm (rust-crossbeam-epoch-0.7): Update to 0.7.2.
[arguments]: Don't skip build. In cargo-inputs replace
rust-memoffset-0.2 with 0.5, rust-scopeguard-0.3 with 1.0. Replace
rust-rand-0.4 with 0.6 in cargo-development-inputs.
2020-07-02 12:25:07 +03:00
Efraim Flashner 6d7d7a2d94
gnu: rust-crossbeam-epoch-0.8: Update to 0.8.2.
* gnu/packages/crates-io.scm (rust-crossbeam-epoch-0.8): Update to 0.8.2.
[arguments]: Don't skip build. In cargo-inputs replace rust-autocfg-0.1
with 1.0. Add rust-maybe-uninit-2.0.
2020-07-02 12:25:07 +03:00
Efraim Flashner aa3ccff1f9
gnu: rust-crossbeam-deque-0.7: Update to 0.7.3.
* gnu/packages/crates-io.scm (rust-crossbeam-deque-0.7): Update to 0.7.3.
[arguments]: Don't skip build. Add rust-maybe-unint-2.0 to cargo-inputs.
2020-07-02 12:25:07 +03:00
Efraim Flashner d7cd309a22
gnu: rust-crossbeam-channel-0.3: Don't skip build.
* gnu/packages/crates-io.scm (rust-crossbeam-channel-0.3)[arguments]:
Don't skip build.
2020-07-02 12:25:07 +03:00
Efraim Flashner 3679514ae6
gnu: rust-crossbeam-channel-0.4: Update to 0.4.2.
* gnu/packages/crates-io.scm (rust-crossbeam-channel-0.4): Update to 0.4.2.
[arguments]: Don't skip build. Add rust-maybe-uninit-2.0 to
cargo-inputs.
2020-07-02 12:25:07 +03:00
Efraim Flashner 793ea22045
gnu: rust-crossbeam-0.7: Update to 0.7.3.
* gnu/packages/crates-io.scm (rust-crossbeam-0.7): Update to 0.7.3.
[arguments]: Don't skip build. In cargo-inputs replace
rust-crossbeam-channel-0.3 with 0.4, rust-crossbeam-epoch-0.7 with 0.8,
rust-crossbeam-queue-0.1 with 0.2, rust-crossbeam-utils-0.6 with 0.7.
Replace rust-rand-0.4 with 0.6 in cargo-development-inputs.
2020-07-02 12:25:06 +03:00
Mathieu Othacehe 044cffdf34
gnu: guix-minimal: Remove as failing and unused.
* gnu/packages/package-management.scm (guix-minimal): Remove it.
2020-07-02 09:54:57 +02:00
Kyle Meyer 64fc2293ca
gnu: git-annex: Build and install man pages.
* gnu/packages/haskell-apps.scm (git-annex)[arguments]: Add phases for
building and installing the man pages.
[native-inputs]: Add perl.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-07-02 10:29:10 +03:00
simendsjo 09502e0233
gnu: Update Iosevka fonts from 3.1.1 to 3.2.2.
* gnu/packages/fonts.scm (font-iosevka, font-iosevka-slab,
font-iosevka-term, font-iosevka-term-slab, font-iosevka-aile,
font-iosevka-etoile, font-iosevka-sparkle): Update to 3.2.2.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-07-02 10:22:44 +03:00
Mathieu Othacehe 6b77e7352d
gnu: guix: Update to 1.1.0-14.5bd8033.
* gnu/packages/package-management.scm (guix): Update to 1.1.0-14.5bd8033.
2020-07-02 09:01:31 +02:00
Efraim Flashner 1bab01c2db
gnu: libmicrohttpd: Update to 0.9.71,
* gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.71.
2020-07-02 09:58:25 +03:00
Jakub Kądziołka 5bd803339d
gnu: deutex: Build with PNG support.
* gnu/packages/game-development.scm (deutex)[inputs]: Add libpng.
  [native-inputs]: Add pkg-config.
2020-07-02 01:07:56 +02:00
Ludovic Courtès d774c7b121
channels: Dependencies listed in '.guix-channel' can have an introduction.
Suggested by Ricardo Wurmus and Simon Tournier.

* guix/channels.scm (sexp->channel-introduction): New procedure.
(read-channel-metadata): Use it.
(profile-channels)[sexp->channel-introduction]: Remove.
* tests/channels.scm ("latest-channel-instances, authenticate dependency"):
New test.
* doc/guix.texi (Channels)[Declaring Channel Dependencies]: Augment example.
2020-07-01 23:34:51 +02:00
Ludovic Courtès 884df77640
channels: Properly diagnose test failure.
This fixes a style issue similar to that of
a18d02def9.

* tests/channels.scm ("authenticate-channel, .guix-authorizations"):
Change to 'test-equal' so that test failures are properly diagnosed.
2020-07-01 23:34:51 +02:00
Ludovic Courtès eb5cf39e66
services: provenance: Save channel introductions.
* gnu/services.scm (channel->code): Include CHANNEL's introduction, if
any, unless CHANNEL is the singleton %DEFAULT-CHANNELS.
(channel->sexp): Add comment.
* guix/scripts/system.scm (sexp->channel): Change pattern to allow for
extensibility.
2020-07-01 23:34:51 +02:00
Ludovic Courtès 6d39f0cb77
guix describe: Display channel introductions and add 'channels-sans-intro'.
* guix/scripts/describe.scm (%available-formats): Add "channels-sans-intro".
(channel->sexp): Add #:include-introduction?.  Emit CHANNEL's intro if
INCLUDE-INTRODUCTION? is true and CHANNEL has an introduction.
(channel->json): Include CHANNEL's introduction, if any.
(channel->recutils): Likewise.
(display-profile-info): Add 'channels-sans-intro' case.
* doc/guix.texi (Invoking guix describe): Add introduction in example.
Add 'channels-sans-intro' case.
2020-07-01 23:34:51 +02:00
Ludovic Courtès 471550c28c
channels: Save and interpret 'introduction' field in provenance data.
With this change, profiles created by 'guix pull' & co. include channel
introductions as part of the channel metadata of each manifest entry.

* guix/channels.scm (channel-instances->manifest)[instance->entry]: Add
'introduction' field when CHANNEL has an introduction.
(profile-channels)[sexp->channel-introduction]: New procedure.
Use it to initialize the 'introduction' field.
2020-07-01 23:34:51 +02:00
Ludovic Courtès 22a9699257
channels: Remove 'signature' from <channel-introduction>.
In the end signing the commit/key pair does not buy us much.  Someone
publishing a valid but different commit/key pair would effectively be
publishing a different channel, which could be a fork (made by a former
authorized developer) or simply a mirror.  In the latter case, there's
nothing to be gained by publishing a different commit/key pair.

* guix/channels.scm (<channel-introduction>)[signature]: Remove.
(make-channel-introduction): Adjust accordingly.
2020-07-01 23:34:51 +02:00
Ludovic Courtès 8b7d982e6a
channels: Make channel introductions public.
* guix/channels.scm (<channel-introduction>): Rename constructor to
'%make-channel-introduction'.
(make-channel-introduction): New procedure.
* tests/channels.scm ("authenticate-channel, wrong first commit signer")
("authenticate-channel, .guix-authorizations"): Use
'make-channel-introduction' without '@@' and without third argument.
* doc/guix.texi (Channels)[Channel Authentication, Specifying Channel
Authorizations]: New subsections.
2020-07-01 23:34:51 +02:00
Ludovic Courtès 6577682a6c
channels: Add 'openpgp-fingerprint->bytevector'.
* guix/channels.scm (openpgp-fingerprint->bytevector): New procedure.
(openpgp-fingerprint): New macro.
(%guix-channel-introduction): Use it.
2020-07-01 23:34:50 +02:00
Efraim Flashner 67ba9815c9
gnu: rust-crossbeam-queue-0.2: Add missing input.
* gnu/packages/crates-io.scm (rust-crossbeam-queue-0.2)[arguments]: Add
rust-maybe-uninit-2.0 to cargo-inputs. Don't skip build.
2020-07-01 23:45:23 +03:00
Mark H Weaver 5db2736005
gnu: linux-libre: Update to 5.4.50.
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.50.
(linux-libre-5.4-pristine-source): Update hash.
2020-07-01 13:31:06 -04:00
Mark H Weaver 0cb4f1e6f1
gnu: linux-libre@5.7: Update to 5.7.7.
* gnu/packages/linux.scm (linux-libre-5.7-version): Update to 5.7.7.
(linux-libre-5.7-pristine-source): Update hash.
2020-07-01 13:30:22 -04:00
Mark H Weaver a43802bfca
gnu: linux-libre@4.19: Update to 4.19.131.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.131.
(linux-libre-4.19-pristine-source): Update hash.
2020-07-01 13:29:46 -04:00
Mark H Weaver e5aa0fd4eb
gnu: linux-libre@4.14: Update to 4.14.187.
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.187.
(linux-libre-4.14-pristine-source): Update hash.
2020-07-01 13:29:02 -04:00
Mark H Weaver 92ce2a0b5f
gnu: linux-libre@4.9: Update to 4.9.229.
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.229.
(linux-libre-4.9-pristine-source): Update hash.
2020-07-01 13:28:14 -04:00
Mark H Weaver e2449dfa1d
gnu: linux-libre@4.4: Update to 4.4.229.
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.229.
(linux-libre-4.4-pristine-source): Update hash.
2020-07-01 13:27:07 -04:00
Mark H Weaver f74e9277c1
gnu: icecat: Update to 68.10.0-guix0-preview1 [security-fixes].
Includes fixes for CVE-2020-12417, CVE-2020-12418, CVE-2020-12419,
CVE-2020-12420, and CVE-2020-12421.

* gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update.
(icecat-source): Update gnuzilla commit, base version, and hashes.  Remove
code that deleted the Onion Browser Button extension, which is no longer
bundled upstream.
* gnu/packages/patches/icecat-makeicecat.patch: Adapt to new version.
2020-07-01 12:45:08 -04:00
Efraim Flashner ade0f8ea0c
gnu: gama: Update to 2.09.
* gnu/packages/gps.scm (gama): Update to 2.09.
2020-07-01 19:40:24 +03:00
Tobias Geerinckx-Rice 78d473aaf9
gnu: squid: Update to 4.12.
* gnu/packages/networking.scm (squid): Update to 4.12.
2020-07-01 17:52:45 +02:00
Tobias Geerinckx-Rice 5ebab403b1
gnu: libndp: Use HTTPS.
* gnu/packages/networking.scm (libndp)[source]: Hard-code NAME.  Use HTTPS.
[home-page]: Use HTTPS.
2020-07-01 17:52:44 +02:00