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100000 Commits (c1a2e26b28ab2a2b2cb0b0c6ca46da93efe97948)

Author SHA1 Message Date
Leo Famulari 80d31a7478
gnu: linux-libre: Update kernel configs for 6.2.7.
* gnu/packages/aux-files/linux-libre/6.2-arm.conf,
gnu/packages/aux-files/linux-libre/6.2-arm64.conf,
gnu/packages/aux-files/linux-libre/6.2-i686.conf,
gnu/packages/aux-files/linux-libre/6.2-x86_64.conf: Set some new configuration
options.
2023-03-19 18:01:00 -04:00
Leo Famulari 90c8f62328
gnu: linux-libre 4.14: Update to 4.14.310.
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.310.
(linux-libre-4.14-pristine-source, deblob-scripts-4.14): Update hashes.
2023-03-19 18:00:59 -04:00
Leo Famulari 5617381fc1
gnu: linux-libre 4.19: Update to 4.19.278.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.278.
(linux-libre-4.19-pristine-source, deblob-scripts-4.19): Update hashes.
2023-03-19 18:00:59 -04:00
Leo Famulari fed3cf520e
gnu: linux-libre 5.4: Update to 5.4.237.
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.237.
(linux-libre-5.4-pristine-source, deblob-scripts-5.4): Update hashes.
2023-03-19 18:00:59 -04:00
Leo Famulari 400cb5cf58
gnu: linux-libre 5.10: Update to 5.10.175.
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.175.
(linux-libre-5.10-pristine-source, deblob-scripts-5.10): Update hashes.
2023-03-19 18:00:59 -04:00
Leo Famulari fccf2b2fb5
gnu: linux-libre 5.15: Update to 5.15.103.
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.103.
(linux-libre-5.15-pristine-source, deblob-scripts-5.15): Update hashes.
2023-03-19 18:00:58 -04:00
Leo Famulari d683261b23
gnu: linux-libre 6.1: Update to 6.1.20.
* gnu/packages/linux.scm (linux-libre-6.1-version): Update to 6.1.20.
(linux-libre-6.1-pristine-source, deblob-scripts-6.1): Update hashes.
2023-03-19 18:00:58 -04:00
Leo Famulari 0824203a22
gnu: linux-libre: Update to 6.2.7.
* gnu/packages/linux.scm (linux-libre-6.2-version): Update to 6.2.7.
(linux-libre-6.2-pristine-source, deblob-scripts-6.2): Update hashes.
2023-03-19 18:00:58 -04:00
Yovan Naumovski 65587224cd
gnu: atop: Update to 2.8.1.
* gnu/packages/admin.scm (atop): Update to 2.8.1.

Signed-off-by: Leo Famulari <leo@famulari.name>
2023-03-19 16:55:52 -04:00
Ricardo Wurmus 896c2a0c45
gnu: r-flexmix: Update to 2.3-19.
* gnu/packages/statistics.scm (r-flexmix): Update to 2.3-19.
2023-03-19 21:01:39 +01:00
Ricardo Wurmus 83978be759
gnu: r-xml: Update to 3.99-0.14.
* gnu/packages/statistics.scm (r-xml): Update to 3.99-0.14.
2023-03-19 21:01:39 +01:00
Ricardo Wurmus 8cf778103e
gnu: r-blob: Update to 1.2.4.
* gnu/packages/statistics.scm (r-blob): Update to 1.2.4.
2023-03-19 21:01:39 +01:00
Ricardo Wurmus 4532e7f415
gnu: r-gtable: Update to 0.3.2.
* gnu/packages/statistics.scm (r-gtable): Update to 0.3.2.
[propagated-inputs]: Add r-cli, r-glue, r-lifecycle, and r-rlang.
2023-03-19 21:01:39 +01:00
Ricardo Wurmus 157733c8f2
gnu: r-commonmark: Update to 1.9.0.
* gnu/packages/statistics.scm (r-commonmark): Update to 1.9.0.
2023-03-19 21:01:39 +01:00
Ricardo Wurmus f4a0f04cc3
gnu: r-qpdf: Update to 1.3.2.
* gnu/packages/cran.scm (r-qpdf): Update to 1.3.2.
2023-03-19 21:01:39 +01:00
Ricardo Wurmus 4def53a3fc
gnu: r-mlr3: Update to 0.15.0.
* gnu/packages/cran.scm (r-mlr3): Update to 0.15.0.
2023-03-19 21:01:38 +01:00
Ricardo Wurmus bd266c08b8
gnu: r-paradox: Update to 0.11.1.
* gnu/packages/cran.scm (r-paradox): Update to 0.11.1.
2023-03-19 21:01:38 +01:00
Ricardo Wurmus cdc5dae016
gnu: r-anndata: Update to 0.7.5.6.
* gnu/packages/cran.scm (r-anndata): Update to 0.7.5.6.
2023-03-19 21:01:38 +01:00
Ricardo Wurmus f2a67431f9
gnu: r-wk: Update to 0.7.2.
* gnu/packages/cran.scm (r-wk): Update to 0.7.2.
2023-03-19 21:01:38 +01:00
Ricardo Wurmus 8ab5665bfd
gnu: r-insight: Update to 0.19.1.
* gnu/packages/cran.scm (r-insight): Update to 0.19.1.
2023-03-19 21:01:37 +01:00
Ricardo Wurmus 4f4817e0f0
gnu: r-learnr: Update to 0.11.3.
* gnu/packages/cran.scm (r-learnr): Update to 0.11.3.
2023-03-19 21:01:37 +01:00
Ricardo Wurmus f39d04ab93
gnu: r-renv: Update to 0.17.2.
* gnu/packages/cran.scm (r-renv): Update to 0.17.2.
2023-03-19 21:01:37 +01:00
Ricardo Wurmus aea6e0ac39
gnu: r-vctrs: Update to 0.6.0.
* gnu/packages/cran.scm (r-vctrs): Update to 0.6.0.
2023-03-19 21:01:37 +01:00
Ricardo Wurmus 911d141c0c
gnu: r-psych: Update to 2.3.3.
* gnu/packages/cran.scm (r-psych): Update to 2.3.3.
2023-03-19 21:01:37 +01:00
Ricardo Wurmus 12ea308ad9
gnu: r-rmpi: Update to 0.7-1.
* gnu/packages/cran.scm (r-rmpi): Update to 0.7-1.
2023-03-19 21:01:36 +01:00
Ricardo Wurmus bcb059801d
gnu: r-htmlwidgets: Update to 1.6.2.
* gnu/packages/cran.scm (r-htmlwidgets): Update to 1.6.2.
2023-03-19 21:01:36 +01:00
Ricardo Wurmus ac3c9b4344
gnu: r-servr: Update to 0.26.
* gnu/packages/cran.scm (r-servr): Update to 0.26.
2023-03-19 21:01:36 +01:00
Ricardo Wurmus 476f987f48
gnu: r-bestnormalize: Update to 1.9.0.
* gnu/packages/cran.scm (r-bestnormalize): Update to 1.9.0.
[propagated-inputs]: Add r-generics.
2023-03-19 21:01:30 +01:00
Ricardo Wurmus e9c8c01e24
gnu: r-desctools: Update to 0.99.48.
* gnu/packages/statistics.scm (r-desctools): Update to 0.99.48.
[native-inputs]: Add r-r-rsp.
2023-03-19 16:11:58 +01:00
Ricardo Wurmus 675be97376
gnu: r-lubridate: Update to 1.9.2.
* gnu/packages/statistics.scm (r-lubridate): Update to 1.9.2.
2023-03-19 16:11:58 +01:00
Ricardo Wurmus 7eb5c642d3
gnu: r-lme4: Update to 1.1-32.
* gnu/packages/statistics.scm (r-lme4): Update to 1.1-32.
2023-03-19 16:11:58 +01:00
Ricardo Wurmus e2f20d9309
gnu: r-vgam: Update to 1.1-8.
* gnu/packages/statistics.scm (r-vgam): Update to 1.1-8.
2023-03-19 16:11:58 +01:00
Ricardo Wurmus 8a52db6989
gnu: r-hmisc: Update to 5.0-1.
* gnu/packages/statistics.scm (r-hmisc): Update to 5.0-1.
[propagated-inputs]: Remove r-lattice, r-latticeextra, and r-survival; add r-colorspace,
r-knitr, and r-rmarkdown.
2023-03-19 16:11:58 +01:00
Ricardo Wurmus 843e4cc583
gnu: r-pkgmaker: Update to 0.32.8.
* gnu/packages/statistics.scm (r-pkgmaker): Update to 0.32.8.
2023-03-19 16:11:58 +01:00
Ricardo Wurmus 3d4dd58647
gnu: r-rsqlite: Update to 2.3.0.
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.3.0.
[propagated-inputs]: Remove r-rcpp; add r-cpp11.
2023-03-19 16:11:58 +01:00
Ricardo Wurmus 36c8d51d14
gnu: r-rcpparmadillo: Update to 0.12.0.1.0.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.12.0.1.0.
2023-03-19 16:11:58 +01:00
Ricardo Wurmus d90503f84f
gnu: r-readr: Update to 2.1.4.
* gnu/packages/statistics.scm (r-readr): Update to 2.1.4.
2023-03-19 16:11:58 +01:00
Ricardo Wurmus 4fbee041a9
gnu: r-httr: Update to 1.4.5.
* gnu/packages/statistics.scm (r-httr): Update to 1.4.5.
2023-03-19 16:11:58 +01:00
Ricardo Wurmus ceb2a75dda
gnu: r-openssl: Update to 2.0.6.
* gnu/packages/statistics.scm (r-openssl): Update to 2.0.6.
2023-03-19 16:11:58 +01:00
Ricardo Wurmus 57f8e9fc3d
gnu: r-data-table: Update to 1.14.8.
* gnu/packages/statistics.scm (r-data-table): Update to 1.14.8.
2023-03-19 16:11:58 +01:00
Ricardo Wurmus 73fc67e13e
gnu: r-chron: Update to 2.3-60.
* gnu/packages/statistics.scm (r-chron): Update to 2.3-60.
2023-03-19 16:11:58 +01:00
Ricardo Wurmus 8e17a0412b
gnu: r-formula: Update to 1.2-5.
* gnu/packages/statistics.scm (r-formula): Update to 1.2-5.
2023-03-19 16:11:58 +01:00
Ricardo Wurmus ded63ea3ab
gnu: r-dbplyr: Update to 2.3.1.
* gnu/packages/statistics.scm (r-dbplyr): Update to 2.3.1.
[propagated-inputs]: Remove r-assertthat; add r-tidyr.
2023-03-19 16:11:58 +01:00
Ricardo Wurmus 62b1347bf9
gnu: r-tibble: Update to 3.2.0.
* gnu/packages/statistics.scm (r-tibble): Update to 3.2.0.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus 770c054345
gnu: r-rlang: Update to 1.1.0.
* gnu/packages/statistics.scm (r-rlang): Update to 1.1.0.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus 6e29e15b25
gnu: r-testthat: Update to 3.1.7.
* gnu/packages/statistics.scm (r-testthat): Update to 3.1.7.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus 8a7eb44065
gnu: r-gdtools: Update to 0.3.2.
* gnu/packages/statistics.scm (r-gdtools): Update to 0.3.2.
[inputs]: Remove zlib.
[propagated-inputs]: Add r-curl and r-fontquiver.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus b6776e8f57
gnu: r-ggplot2: Update to 3.4.1.
* gnu/packages/statistics.scm (r-ggplot2): Update to 3.4.1.
[propagated-inputs]: Remove r-digest.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus ce3909f5f2
gnu: r-survival: Update to 3.5-5.
* gnu/packages/statistics.scm (r-survival): Update to 3.5-5.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus 78e9d066c1
gnu: r-mgcv: Update to 1.8-42.
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-42.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus 9cc826ec3d
gnu: r-mass: Update to 7.3-58.3.
* gnu/packages/statistics.scm (r-mass): Update to 7.3-58.3.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus 9e47cdbe90
gnu: r-measurements: Update to 1.5.0.
* gnu/packages/cran.scm (r-measurements): Update to 1.5.0.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus abc7774dc2
gnu: r-automap: Update to 1.1-1.
* gnu/packages/cran.scm (r-automap): Update to 1.1-1.
[propagated-inputs]: Remove r-maptools; add r-sf and r-stars.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus 8cad279fa0
gnu: r-webmockr: Update to 0.9.0.
* gnu/packages/cran.scm (r-webmockr): Update to 0.9.0.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus ba6d2701bb
gnu: r-filehash: Update to 2.4-5.
* gnu/packages/cran.scm (r-filehash): Update to 2.4-5.
[propagated-inputs]: Add r-digest.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus 95c6686176
gnu: r-paws: Update to 0.2.0.
* gnu/packages/cran.scm (r-paws): Update to 0.2.0.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus 94d6fcc7e0
gnu: r-paws-database: Update to 0.2.0.
* gnu/packages/cran.scm (r-paws-database): Update to 0.2.0.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus d261c7b39b
gnu: r-paws-common: Update to 0.5.6.
* gnu/packages/cran.scm (r-paws-common): Update to 0.5.6.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus 327a72a503
gnu: r-rgeos: Update to 0.6-2.
* gnu/packages/cran.scm (r-rgeos): Update to 0.6-2.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus b9122f3dd9
gnu: r-btm: Update to 0.3.7.
* gnu/packages/cran.scm (r-btm): Update to 0.3.7.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus a0038b0f37
gnu: r-mlr3tuning: Update to 0.18.0.
* gnu/packages/cran.scm (r-mlr3tuning): Update to 0.18.0.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus 32cfd782ea
gnu: r-calculus: Update to 1.0.1.
* gnu/packages/cran.scm (r-calculus): Update to 1.0.1.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus 63fc234131
gnu: r-parsnip: Update to 1.0.4.
* gnu/packages/cran.scm (r-parsnip): Update to 1.0.4.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus ccef849f84
gnu: r-workflows: Update to 1.1.3.
* gnu/packages/cran.scm (r-workflows): Update to 1.1.3.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus b3cbbfedb8
gnu: r-igraph: Update to 1.4.1.
* gnu/packages/cran.scm (r-igraph): Update to 1.4.1.
[native-inputs]: Add r-knitr.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus f44faf597c
gnu: r-rfast: Update to 2.0.7.
* gnu/packages/cran.scm (r-rfast): Update to 2.0.7.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus efff0d4ccc
gnu: r-spatstat-random: Update to 3.1-4.
* gnu/packages/cran.scm (r-spatstat-random): Update to 3.1-4.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus 27ce0d8dda
gnu: r-spatstat-linnet: Update to 3.0-6.
* gnu/packages/cran.scm (r-spatstat-linnet): Update to 3.0-6.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus a006593f87
gnu: r-spatstat-geom: Update to 3.1-0.
* gnu/packages/cran.scm (r-spatstat-geom): Update to 3.1-0.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus 5ab9bbaf9e
gnu: r-spatstat-data: Update to 3.0-1.
* gnu/packages/cran.scm (r-spatstat-data): Update to 3.0-1.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus b1cb45a92e
gnu: r-spatstat-sparse: Update to 3.0-1.
* gnu/packages/cran.scm (r-spatstat-sparse): Update to 3.0-1.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus 88fd6a8cdf
gnu: r-spatstat-utils: Update to 3.0-2.
* gnu/packages/cran.scm (r-spatstat-utils): Update to 3.0-2.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus 01fb0c128f
gnu: r-spatstat-model: Update to 3.2-1.
* gnu/packages/cran.scm (r-spatstat-model): Update to 3.2-1.
2023-03-19 16:11:57 +01:00
Ricardo Wurmus 760ecb43ee
gnu: r-spatstat-explore: Update to 3.1-0.
* gnu/packages/cran.scm (r-spatstat-explore): Update to 3.1-0.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus b42e432e8b
gnu: r-conquer: Update to 1.3.3.
* gnu/packages/cran.scm (r-conquer): Update to 1.3.3.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus dcd5c62a99
gnu: r-brms: Update to 2.19.0.
* gnu/packages/cran.scm (r-brms): Update to 2.19.0.
[propagated-inputs]: Add r-rlang.
[native-inputs]: Add r-r-rsp.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus 6ee4024334
gnu: r-posterior: Update to 1.4.1.
* gnu/packages/cran.scm (r-posterior): Update to 1.4.1.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus 541540eace
gnu: r-projpred: Update to 2.4.0.
* gnu/packages/cran.scm (r-projpred): Update to 2.4.0.
[propagated-inputs]: Add r-abind, r-mclogit, r-nnet, r-ordinal, and r-ucminf.
[native-inputs]: Add r-rmarkdown.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus d8bda2d2c7
gnu: r-rstantools: Update to 2.3.0.
* gnu/packages/cran.scm (r-rstantools): Update to 2.3.0.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus 32acc4cc80
gnu: r-packrat: Update to 0.9.1.
* gnu/packages/cran.scm (r-packrat): Update to 0.9.1.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus e943f613c1
gnu: r-butcher: Update to 0.3.2.
* gnu/packages/cran.scm (r-butcher): Update to 0.3.2.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus 0674832a61
gnu: r-forecast: Update to 8.21.
* gnu/packages/cran.scm (r-forecast): Update to 8.21.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus 0052b73ab4
gnu: r-anthropometry: Update to 1.19.
* gnu/packages/cran.scm (r-anthropometry): Update to 1.19.
[propagated-inputs]: Remove r-depth; add r-ddalpha.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus b5f5452eff
gnu: r-tuner: Update to 1.4.3.
* gnu/packages/cran.scm (r-tuner): Update to 1.4.3.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus 73806cc7ac
gnu: r-reldist: Update to 1.7-2.
* gnu/packages/cran.scm (r-reldist): Update to 1.7-2.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus 619010805e
gnu: r-desolve: Update to 1.35.
* gnu/packages/cran.scm (r-desolve): Update to 1.35.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus fba9954192
gnu: r-rgdal: Update to 1.6-5.
* gnu/packages/cran.scm (r-rgdal): Update to 1.6-5.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus e9f1e6450e
gnu: r-terra: Update to 1.7-18.
* gnu/packages/cran.scm (r-terra): Update to 1.7-18.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus 96c4915d7c
gnu: r-rhpcblasctl: Update to 0.23-42.
* gnu/packages/cran.scm (r-rhpcblasctl): Update to 0.23-42.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus c040a41dbd
gnu: r-dae: Update to 3.2.15.
* gnu/packages/cran.scm (r-dae): Update to 3.2.15.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus 75befe143f
gnu: r-styler: Update to 1.9.1.
* gnu/packages/cran.scm (r-styler): Update to 1.9.1.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus 1a89402c3c
gnu: r-sccore: Update to 1.0.3.
* gnu/packages/cran.scm (r-sccore): Update to 1.0.3.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus 136e97ead8
gnu: r-float: Update to 0.3-1.
* gnu/packages/cran.scm (r-float): Update to 0.3-1.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus 3d9ebb293b
gnu: r-arrow: Update to 11.0.0.3.
* gnu/packages/cran.scm (r-arrow): Update to 11.0.0.3.
[native-inputs]: Remove r-knitr.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus c3a3009862
gnu: apache-arrow: Update to 11.0.0.
* gnu/packages/databases.scm (apache-arrow): Update to 11.0.0.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus aaa27f9fe0
gnu: r-aplot: Update to 0.1.10.
* gnu/packages/cran.scm (r-aplot): Update to 0.1.10.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus 71db461a49
gnu: r-triebeard: Update to 0.4.1.
* gnu/packages/cran.scm (r-triebeard): Update to 0.4.1.
[native-inputs]: Add r-knitr.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus b0b5b1050b
gnu: r-rms: Update to 6.5-0.
* gnu/packages/cran.scm (r-rms): Update to 6.5-0.
[propagated-inputs]: Add r-colorspace.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus c4d53756d1
gnu: r-pegas: Update to 1.2.
* gnu/packages/cran.scm (r-pegas): Update to 1.2.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus a5f8f7cd96
gnu: r-spdep: Update to 1.2-8.
* gnu/packages/cran.scm (r-spdep): Update to 1.2-8.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus b652ba0b90
gnu: r-spdata: Update to 2.2.2.
* gnu/packages/cran.scm (r-spdata): Update to 2.2.2.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus 4caf1d2c51
gnu: r-classint: Update to 0.4-9.
* gnu/packages/cran.scm (r-classint): Update to 0.4-9.
2023-03-19 16:11:56 +01:00
Ricardo Wurmus ef9c41c495
gnu: r-sets: Update to 1.0-24.
* gnu/packages/cran.scm (r-sets): Update to 1.0-24.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus d1f91c3818
gnu: r-lavaan: Update to 0.6-15.
* gnu/packages/cran.scm (r-lavaan): Update to 0.6-15.
[propagated-inputs]: Add r-quadprog.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus a33fca6243
gnu: r-future: Update to 1.32.0.
* gnu/packages/cran.scm (r-future): Update to 1.32.0.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus 28926345d1
gnu: r-grimport: Update to 0.9-7.
* gnu/packages/cran.scm (r-grimport): Update to 0.9-7.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus fdd54947b4
gnu: r-gridsvg: Update to 1.7-5.
* gnu/packages/cran.scm (r-gridsvg): Update to 1.7-5.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus aa611093b6
gnu: r-admisc: Update to 0.31.
* gnu/packages/cran.scm (r-admisc): Update to 0.31.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus ddca889b2d
gnu: r-adimpro: Update to 0.9.5.
* gnu/packages/cran.scm (r-adimpro): Update to 0.9.5.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus c889281196
gnu: r-fmri: Update to 1.9.11.
* gnu/packages/cran.scm (r-fmri): Update to 1.9.11.
[propagated-inputs]: Add r-oro-nifti.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus 416aafd4e9
gnu: r-activity: Update to 1.3.3.
* gnu/packages/cran.scm (r-activity): Update to 1.3.3.
[propagated-inputs]: Remove r-insol.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus 7c42e08d83
gnu: r-biocmanager: Update to 1.30.20.
* gnu/packages/cran.scm (r-biocmanager): Update to 1.30.20.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus 783417f096
gnu: r-rcppparallel: Update to 5.1.7.
* gnu/packages/cran.scm (r-rcppparallel): Update to 5.1.7.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus b00e285dec
gnu: r-rcppalgos: Update to 2.7.2.
* gnu/packages/cran.scm (r-rcppalgos): Update to 2.7.2.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus 6f480dbba4
gnu: r-rslurm: Update to 0.6.2.
* gnu/packages/cran.scm (r-rslurm): Update to 0.6.2.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus dc475ea2c0
gnu: r-gh: Update to 1.4.0.
* gnu/packages/cran.scm (r-gh): Update to 1.4.0.
[propagated-inputs]: Remove r-httr; add r-httr2 and r-rlang.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus 6bb6706c42
gnu: r-sjplot: Update to 2.8.13.
* gnu/packages/cran.scm (r-sjplot): Update to 2.8.13.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus 9c92f11378
gnu: r-ggeffects: Update to 1.2.0.
* gnu/packages/cran.scm (r-ggeffects): Update to 1.2.0.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus ee1fd5cefd
gnu: r-emmeans: Update to 1.8.5.
* gnu/packages/cran.scm (r-emmeans): Update to 1.8.5.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus 2ae840725d
gnu: r-multcomp: Update to 1.4-23.
* gnu/packages/cran.scm (r-multcomp): Update to 1.4-23.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus 473340074e
gnu: r-magick: Update to 2.7.4.
* gnu/packages/cran.scm (r-magick): Update to 2.7.4.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus de6f3bf542
gnu: r-raster: Update to 3.6-20.
* gnu/packages/cran.scm (r-raster): Update to 3.6-20.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus f63f68d0a0
gnu: r-ggnetwork: Update to 0.5.12.
* gnu/packages/cran.scm (r-ggnetwork): Update to 0.5.12.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus c18cd55c9a
gnu: r-precrec: Update to 0.14.2.
* gnu/packages/cran.scm (r-precrec): Update to 0.14.2.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus d6e7c205b2
gnu: r-argparse: Update to 2.2.2.
* gnu/packages/cran.scm (r-argparse): Update to 2.2.2.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus e83194905b
gnu: r-findpython: Update to 1.0.8.
* gnu/packages/cran.scm (r-findpython): Update to 1.0.8.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus 8431c3144c
gnu: r-golem: Update to 0.4.0.
* gnu/packages/cran.scm (r-golem): Update to 0.4.0.
[propagated-inputs]: Remove r-cli, r-crayon, r-desc, r-fs, r-pkgload, r-roxygen2,
r-rstudioapi, and r-usethis; add r-rlang.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus 714be060dc
gnu: r-flextable: Update to 0.9.0.
* gnu/packages/cran.scm (r-flextable): Update to 0.9.0.
[propagated-inputs]: Remove r-base64enc; add r-ragg.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus f29feaa2bb
gnu: r-officer: Update to 0.6.1.
* gnu/packages/cran.scm (r-officer): Update to 0.6.1.
[propagated-inputs]: Add r-ragg.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus 21d0faf01b
gnu: r-ggpubr: Update to 0.6.0.
* gnu/packages/cran.scm (r-ggpubr): Update to 0.6.0.
2023-03-19 16:11:55 +01:00
Ricardo Wurmus ea825b9dc6
gnu: r-ggsci: Update to 3.0.0.
* gnu/packages/cran.scm (r-ggsci): Update to 3.0.0.
[native-inputs]: Add r-knitr.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus 88e8116f1e
gnu: r-renv: Update to 0.17.0.
* gnu/packages/cran.scm (r-renv): Update to 0.17.0.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus 78215fa8de
gnu: r-dtplyr: Update to 1.3.0.
* gnu/packages/cran.scm (r-dtplyr): Update to 1.3.0.
[propagated-inputs]: Remove r-ellipsis; add r-cli.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus 828e5333d9
gnu: r-randomizr: Update to 0.24.0.
* gnu/packages/cran.scm (r-randomizr): Update to 0.24.0.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus 73c2a74f99
gnu: r-np: Update to 0.60-17.
* gnu/packages/cran.scm (r-np): Update to 0.60-17.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus e3840184e8
gnu: r-fbasics: Update to 4022.94.
* gnu/packages/cran.scm (r-fbasics): Update to 4022.94.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus 486f488204
gnu: r-tinytest: Update to 1.4.1.
* gnu/packages/cran.scm (r-tinytest): Update to 1.4.1.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus 69d13df510
gnu: r-seriation: Update to 1.4.2.
* gnu/packages/cran.scm (r-seriation): Update to 1.4.2.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus acbd48f3ad
gnu: r-tsp: Update to 1.2-3.
* gnu/packages/cran.scm (r-tsp): Update to 1.2-3.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus 57fdd59015
gnu: r-gss: Update to 2.2-4.
* gnu/packages/cran.scm (r-gss): Update to 2.2-4.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus 18a7851eb8
gnu: r-scatterplot3d: Update to 0.3-43.
* gnu/packages/cran.scm (r-scatterplot3d): Update to 0.3-43.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus 4ce3068c3f
gnu: r-vcfr: Update to 1.14.0.
* gnu/packages/cran.scm (r-vcfr): Update to 1.14.0.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus fa52f184fe
gnu: r-xts: Update to 0.13.0.
* gnu/packages/cran.scm (r-xts): Update to 0.13.0.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus 554cd5475d
gnu: r-mitml: Update to 0.4-5.
* gnu/packages/cran.scm (r-mitml): Update to 0.4-5.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus 149554b26b
gnu: r-recipes: Update to 1.0.5.
* gnu/packages/cran.scm (r-recipes): Update to 1.0.5.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus ac2ddafaa5
gnu: r-broom: Update to 1.0.4.
* gnu/packages/cran.scm (r-broom): Update to 1.0.4.
[propagated-inputs]: Add r-lifecycle.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus 5eca0ff32c
gnu: r-ipred: Update to 0.9-14.
* gnu/packages/cran.scm (r-ipred): Update to 0.9-14.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus ef51fdc672
gnu: r-rpostgresql: Update to 0.7-5.
* gnu/packages/cran.scm (r-rpostgresql): Update to 0.7-5.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus 77d8f691a6
gnu: r-lava: Update to 1.7.2.1.
* gnu/packages/cran.scm (r-lava): Update to 1.7.2.1.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus 73c2d4ef23
gnu: r-inum: Update to 1.0-5.
* gnu/packages/cran.scm (r-inum): Update to 1.0-5.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus da64f72edd
gnu: r-rmumps: Update to 5.2.1-23.
* gnu/packages/cran.scm (r-rmumps): Update to 5.2.1-23.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus 52d8c140b8
gnu: r-lamw: Update to 2.1.2.
* gnu/packages/cran.scm (r-lamw): Update to 2.1.2.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus 028166eec9
gnu: r-rcppnumerical: Update to 0.5-0.
* gnu/packages/cran.scm (r-rcppnumerical): Update to 0.5-0.
[native-inputs]: Add r-knitr and r-rmarkdown.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus 6264b80731
gnu: r-partykit: Update to 1.2-18.
* gnu/packages/cran.scm (r-partykit): Update to 1.2-18.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus 55c0a27187
gnu: r-ape: Update to 5.7-1.
* gnu/packages/cran.scm (r-ape): Update to 5.7-1.
[propagated-inputs]: Add r-digest.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus 42c4356f9c
gnu: r-ggmap: Update to 3.0.2.
* gnu/packages/cran.scm (r-ggmap): Update to 3.0.2.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus 441c60d2b2
gnu: r-gensa: Update to 1.1.8.
* gnu/packages/cran.scm (r-gensa): Update to 1.1.8.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus 4235e02dd9
gnu: r-rstpm2: Update to 1.6.2.
* gnu/packages/cran.scm (r-rstpm2): Update to 1.6.2.
2023-03-19 16:11:54 +01:00
Ricardo Wurmus 17b68a4ac5
gnu: r-fastmap: Update to 1.1.1.
* gnu/packages/cran.scm (r-fastmap): Update to 1.1.1.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus 29f95b47ec
gnu: r-modelenv: Update to 0.1.1.
* gnu/packages/cran.scm (r-modelenv): Update to 0.1.1.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus b71f95b08e
gnu: r-readxl: Update to 1.4.2.
* gnu/packages/cran.scm (r-readxl): Update to 1.4.2.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus 2416e5dcd4
gnu: r-ggalluvial: Update to 0.12.5.
* gnu/packages/cran.scm (r-ggalluvial): Update to 0.12.5.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus 02cdebebff
gnu: r-climaemet: Update to 1.1.0.
* gnu/packages/cran.scm (r-climaemet): Update to 1.1.0.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus d1dbfcc4cb
gnu: r-gson: Update to 0.1.0.
* gnu/packages/cran.scm (r-gson): Update to 0.1.0.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus 58e114a702
gnu: r-googlevis: Update to 0.7.1.
* gnu/packages/cran.scm (r-googlevis): Update to 0.7.1.
[native-inputs]: Add r-rmarkdown.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus 332d829c6e
gnu: r-castor: Update to 1.7.8.
* gnu/packages/cran.scm (r-castor): Update to 1.7.8.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus 3556f4319c
gnu: r-cachem: Update to 1.0.7.
* gnu/packages/cran.scm (r-cachem): Update to 1.0.7.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus ff80f791e9
gnu: r-afpt: Update to 1.1.0.3.
* gnu/packages/cran.scm (r-afpt): Update to 1.1.0.3.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus a28a357675
gnu: r-mutoss: Update to 0.1-13.
* gnu/packages/bioconductor.scm (r-mutoss): Update to 0.1-13.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus 55710837d9
gnu: r-valr: Update to 0.6.7.
* gnu/packages/bioconductor.scm (r-valr): Update to 0.6.7.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus ab428404de
gnu: r-numbat: Update to 1.2.2.
* gnu/packages/bioconductor.scm (r-numbat): Update to 1.2.2.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus 9d4e62ccce
gnu: r-memuse: Adjust indentation.
* gnu/packages/cran.scm (r-memuse): Adjust indentation.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus af861fdead
gnu: r-shadowtext: Update indentation.
* gnu/packages/cran.scm (r-shadowtext): Adjust indentation.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus 257ef3f659
gnu: Add r-mclogit.
* gnu/packages/cran.scm (r-mclogit): New variable.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus 8eccc02ec9
gnu: Add r-memisc.
* gnu/packages/cran.scm (r-memisc): New variable.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus ac5011546d
gnu: r-qs: Update to 0.25.5.
* gnu/packages/cran.scm (r-qs): Update to 0.25.5.
[inputs]: Remove zlib.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus a1fcc6c595
gnu: r-leaflet: Update to 2.1.2.
* gnu/packages/cran.scm (r-leaflet): Update to 2.1.2.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus 2c58e06a17
gnu: r-sf: Update to 1.0-11.
* gnu/packages/cran.scm (r-sf): Update to 1.0-11.
[inputs]: Remove zlib.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus 47bce97778
gnu: r-ggvis: Update to 0.4.8.
* gnu/packages/cran.scm (r-ggvis): Update to 0.4.8.
[source]: Remove five minified JavaScript files.
[arguments]: Add build phase 'process-javascript.
[native-inputs]: Add esbuild and js-lodash.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus 1b50213ad7
gnu: r-opencpu: Update to 2.2.9.
* gnu/packages/cran.scm (r-opencpu): Update to 2.2.9.
[source]: Remove two minified JavaScript files.
[arguments]: Add build phases 'process-javascript.
[native-inputs]: Add esbuild, r-r-rsp, and js-query.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus 6b41dccf35
gnu: r-bookdown: Update to 0.33.
* gnu/packages/cran.scm (r-bookdown): Update to 0.33.
[source]: Delete three minified JavaScript files.
[arguments]: Add build phase 'process-javascript.
[native-inputs]: Add esbuild, js-clipboard, js-lunarjs, and js-mathquill.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus fce72b3522
gnu: r-haven: Update to 2.5.2.
* gnu/packages/cran.scm (r-haven): Update to 2.5.2.
[arguments]: Update to link with readstat.
[inputs]: Add zlib.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus 40cb3c30fc
gnu: readstat: Update to 1.1.9.
* gnu/packages/statistics.scm (readstat): Update to 1.1.9.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus 5050034b4e
gnu: r-httpuv: Update to 1.6.9.
* gnu/packages/cran.scm (r-httpuv): Update to 1.6.9.
[inputs]: Replace libuv with libuv-for-r-httpuv.
[arguments]: Patch Makevars to link with that variant of libuv.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus ef86b0b12e
gnu: Add libuv-for-r-httpuv.
* gnu/packages/libevent.scm (libuv-for-r-httpuv): New variable.
2023-03-19 16:11:53 +01:00
Ricardo Wurmus e72d0d9208
gnu: r-dt: Update to 0.27.
* gnu/packages/statistics.scm (r-dt): Update to 0.27.
2023-03-19 16:11:49 +01:00
Lars-Dominik Braun f9702aa9fd
gnu: Add python-brian2.
* gnu/packages/machine-learning.scm (python-brian2): New variable.
2023-03-19 11:33:52 +01:00
Lars-Dominik Braun c16add7fd9
gnu: python-pillow: Fix CVE-2022-45199.
Fixes: <https://issues.guix.gnu.org/issue/61172>

* gnu/packages/python-xyz.scm (python-pillow/security-fixes): New variable.
(python-pillow): Add replacement.
* gnu/packages/patches/python-pillow-CVE-2022-45199.patch: New file.
* gnu/local.mk: Register it.
2023-03-19 10:57:00 +01:00
Liliana Marie Prikler d7b4ecdb4c
gnu: Add a4pdf.
* gnu/packages/pdf.scm (a4pdf): New variable.
2023-03-19 09:25:36 +01:00
Liliana Marie Prikler fa50974134
gnu: komikku: Update to 1.14.0.
* gnu/packages/gnome.scm (komikku): Update to 1.14.0.
2023-03-19 09:25:36 +01:00
Ekaitz Zarraga d59eb81b5c
gnu: zig: Build against a baseline CPU.
* gnu/packages/zig.scm (zig-0.10)[#:configure-flags]: Add
“-DZIG_TARGET_MCPU=baseline”.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-03-19 09:25:36 +01:00
Arun Isaac 34fed18169
gnu: Add tissue.
* gnu/packages/web.scm (tissue): New variable.
2023-03-18 17:23:32 +00:00
Yovan Naumovski 99114eb638
gnu: bemenu: Update to 0.6.14.
* gnu/packages/xdisorg.scm (bemenu): Update to 0.6.14.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-03-17 23:20:36 +01:00
Bruno Victal 20aa4c30fb
services: dict: Deprecate 'dicod-service' procedure.
* doc/guix.texi (Miscellaneous Services): Remove 'dicod-service' mention.
* gnu/services/dict.scm (dicod-service): Deprecate procedure.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-03-17 23:20:36 +01:00
conses 511ae8325d
home: services: Add home-xmodmap-service-type.
* gnu/home/services/desktop.scm (home-xmodmap-service-type)
(home-xmodmap-configuration): New variables;
(serialize-xmodmap-configuration)
(xmodmap-shepherd-service): New procedures;
* doc/guix.texi (Desktop Services): Document it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-03-17 23:20:36 +01:00
Vivien Kraus 97a759769d
gnu: guile-gnutls: Do not expect gnulib shebangs to work.
* gnu/packages/tls.scm (guile-gnutls) [phase patch-more-shebangs]: Fix how
autogen.sh invokes gnulib-tool, and how configure.ac invokes git-version-gen,
so as not to rely on shebangs.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-03-17 23:20:35 +01:00
Vivien Kraus 25cad45639
gnu: gnulib: Restore shebangs.
* gnu/packages/build-tools.scm (gnulib)[arguments]: Add
'restore-shebangs' phase.
[inputs, native-inputs]: Add bash-minimal.
[phase let-autogen-execute-gnulib-tool]: Specify a shell to execute
gnulib-tool from autogen.sh.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-03-17 23:20:35 +01:00
Ludovic Courtès b5a70370f5
services: console-font: 'stop' method always returns #f.
The 'stop' method of Shepherd services is supposed to return #f on
success.

* gnu/services/base.scm (console-font-shepherd-services): 'stop' method
returns #f.
2023-03-17 23:20:35 +01:00
Maxim Cournoyer 2dc2722dc0
gnu: ccextractor: Update to 0.94 and fix build.
* gnu/packages/gstreamer.scm (ccextractor): Update to 0.94.
[source]: Apply patches.  Add FIXME comment.
[build-system]: Switch to gnu-build-system.
[arguments]: Delete #tests? argument.  Delete trailing #t and use gexps.
Adjust configure flags accordingly, removing WITH_SHARING (doesn't exist for
Autoconf) and adding '--without-rust'.  Override check phase.
[native-inputs]: Remove labels.  Remove python-wrapper and perl.
[propagated-inputs]: Remove labels.  Remove nanomsg and zlib.  Replace
leptonica with leptonica-1.80.  replace tesseract-ocr with tesseract-ocr-4.
* gnu/packages/patches/ccextractor-add-missing-header.patch: New file.
* gnu/packages/patches/ccextractor-autoconf-tesseract.patch: Likewise.
* gnu/packages/patches/ccextractor-fix-ocr.patch: Likewise.
* gnu/local.mk (dist_patch_DATA): Register them.
2023-03-17 10:40:02 -04:00
Maxim Cournoyer 8832acc24e
gnu: Add tesseract-ocr-4.
* gnu/packages/ocr.scm (tesseract-ocr-4): New variable.
2023-03-17 10:29:50 -04:00