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58278 Commits (c1d81df93d4b67671fc4a8e0a80c0f02c5821663)

Author SHA1 Message Date
Ricardo Wurmus c639485645
gnu: r-performance: Update to 0.4.5.
* gnu/packages/cran.scm (r-performance): Update to 0.4.5.
2020-04-01 11:15:26 +02:00
Ricardo Wurmus 76fb1e8f3f
gnu: r-heatmaply: Update to 1.1.0.
* gnu/packages/cran.scm (r-heatmaply): Update to 1.1.0.
2020-04-01 11:15:26 +02:00
Ricardo Wurmus c7e4a01669
gnu: r-quantmod: Update to 0.4.17.
* gnu/packages/cran.scm (r-quantmod): Update to 0.4.17.
2020-04-01 11:15:26 +02:00
Ricardo Wurmus dbf4aaeab8
gnu: r-tinytex: Update to 0.21.
* gnu/packages/cran.scm (r-tinytex): Update to 0.21.
2020-04-01 11:15:26 +02:00
Ricardo Wurmus 29825fe290
gnu: r-callr: Update to 3.4.3.
* gnu/packages/cran.scm (r-callr): Update to 3.4.3.
2020-04-01 11:15:26 +02:00
Ricardo Wurmus 0b4067277e
gnu: r-sn: Update to 1.6-0.
* gnu/packages/statistics.scm (r-sn): Update to 1.6-0.
[propagated-inputs]: Add r-quantreq.
2020-04-01 11:15:25 +02:00
Ricardo Wurmus 13472a670c
gnu: r-gtools: Update to 3.8.2.
* gnu/packages/statistics.scm (r-gtools): Update to 3.8.2.
2020-04-01 11:15:25 +02:00
Ricardo Wurmus 383895dde4
gnu: r-foreach: Update to 1.5.0.
* gnu/packages/statistics.scm (r-foreach): Update to 1.5.0.
[native-inputs]: Add r-knitr.
2020-04-01 11:15:25 +02:00
Ricardo Wurmus 53477d9786
gnu: r-tibble: Update to 3.0.0.
* gnu/packages/statistics.scm (r-tibble): Update to 3.0.0.
[propagated-inputs]: Add r-ellipsis, r-lifecycle, r-magrittr, and r-vctrs.
[native-inputs]: Add r-knitr.
2020-04-01 11:15:25 +02:00
John Soo 31e47945d3
gnu: Add emacs-elf-mode.
* gnu/packages/emacs-xyz.scm (emacs-elf-mode): New variable.
2020-04-01 10:43:44 +02:00
John Soo 61e10fa839
gnu: Add emacs-imenu-list.
* gnu/packages/emacs-xyz.scm (emacs-imenu-list): New variable.
2020-04-01 10:36:39 +02:00
John Soo 1d5c93d9f8
gnu: Add emacs-evil-tmux-navigator.
* gnu/packages/emacs-xyz.scm (emacs-evil-tmux-navigator): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-04-01 09:04:53 +01:00
Efraim Flashner fba0fea4a6
gnu: toot: Adjust custom phases.
* gnu/packages/mastodon.scm (toot)[arguments]: 'check is already run
after 'install so replace 'check rather than re-inserting it.
2020-04-01 10:22:33 +03:00
Efraim Flashner b7417f3d54
gnu: toot: Update to 0.25.2.
* gnu/packages/mastodon.scm (toot): Update to 0.25.2.
2020-04-01 10:21:48 +03:00
Efraim Flashner 5619741752
gnu: vim-asyncrun: Update to 2.7.1.
* gnu/packages/vim.scm (vim-asyncrun): Update to 2.7.1.
2020-04-01 10:19:33 +03:00
Efraim Flashner 2a844af991
gnu: mpv-mpris: Switch to copy-build-system.
* gnu/packages/video.scm (mpv-mpris)[build-system]: Switch to
copy-build-system.
[arguments]: Add custom 'build phase before 'install phase.
2020-04-01 10:17:47 +03:00
Efraim Flashner b51a37b116
gnu: mpv-mpris: Update to 0.4.
* gnu/packages/video.scm (mpv-mpris): Update to 0.4.
2020-04-01 10:11:35 +03:00
Efraim Flashner dbb58f28ea
gnu: font-gnu-unifont: Update to 13.0.01.
* ngu/packages/fonts.scm (font-gnu-unifont): Update to 13.0.01.
[home-page]: Follow redirect.
2020-04-01 09:39:13 +03:00
Efraim Flashner 17264e362c
gnu: emacs-discover-my-major: Don't use unstable tarball.
* gnu/packages/emacs-xyz.scm (emacs-discover-my-major)[source]: Download
using git-fetch. Use new upstream URI.
[home-page]: Update to new home-page.
2020-04-01 09:16:24 +03:00
Efraim Flashner f12bd0bedd
system: Move nanorc to XDG_CONFIG_HOME.
* gnu/system/shadow.scm (skeleton-directory): Move .nanorc to
.config/nano/nanorc.
2020-04-01 07:50:48 +03:00
Ricardo Wurmus 92dae7a605
gnu: mumi: Update to 0.0.0-11.0e9af8d.
* gnu/packages/mail.scm (mumi): Update to 0.0.0-11.0e9af8d.
2020-04-01 06:07:28 +02:00
Raghav Gururajan f1cf62f5dc
gnu: Add libantlr3c.
* gnu/packages/java.scm (libantlr3c): New variable.

Co-authored by Maxim Cournoyer.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2020-03-31 22:31:43 -04:00
Ricardo Wurmus 284b27c5ae
gnu: mumi: Update to 0.0.0-10.f7d6a54.
* gnu/packages/mail.scm (mumi): Update to 0.0.0-10.f7d6a54.
2020-04-01 04:28:19 +02:00
Kyle Meyer 9cbc5fae80
gnu: git-annex: Update to 8.20200330.
* gnu/packages/haskell-apps.scm (git-annex): Update to 8.20200330.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2020-04-01 01:20:42 +02:00
Jack Hill a7cc13ed83
gnu: gimp: Disable automatic update checking
* gnu/packages/gimp.scm (gimp)[arguments]: Disable update checking
in #:configure-flags.

Signed-off-by: Leo Famulari <leo@famulari.name>
2020-03-31 18:39:56 -04:00
Ludovic Courtès e62f6f77fe
gnu: gnumach: Fix compilation.
* gnu/packages/hurd.scm (gnumach)[arguments]: Inherit arguments from
GNUMACH-HEADERS.
[native-inputs]: Add AUTOCONF, AUTOMAKE, and TEXINFO-4.
2020-04-01 00:12:31 +02:00
Ludovic Courtès b87d7002b7
Revert "gnu: coreutils: Fix cross-compilation to i586-pc-gnu."
This reverts commit 67cbfeae30, which is
not longer necessary now that the 'ld.so' linker script of the cross
glibc contains "libhurduser.so libmachuser.so".
2020-04-01 00:12:31 +02:00
Jan Nieuwenhuizen b3bd475696
gnu: cross-libc: Build fix for the Hurd.
This fixes cross building of coreutils, e.g.

    ./pre-inst-env guix build --target=i586-pc-gnu coreutils

* gnu/packages/cross-base.scm (cross-libc): Add -lhurduser, -lmachuser for the
Hurd.
2020-04-01 00:12:31 +02:00
Raghav Gururajan d82539d35f
gnu: Add spandsp.
* gnu/packages/telephony.scm (spandsp): New variable.

Co-authored by Maxim Cournoyer.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2020-03-31 17:02:58 -04:00
Vitaliy Shatrov 3de5b4047e
gnu: Add neverball
* gnu/packages/games.scm (neverball): New variable.
2020-03-31 20:19:21 +02:00
Leo Famulari 653a51cb28
gnu: pam-krb5: Fix CVE-2020-10595.
* gnu/packages/patches/pam-krb5-CVE-2020-10595.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/admin.scm (pam-krb5)[source]: Use it.
2020-03-31 13:31:57 -04:00
Leo Famulari 2206805c2c
gnu: python-pyyaml: Update to 5.3.1 [fixes CVE-2020-1747]
* gnu/packages/python-xyz.scm (python-pyyaml): Update to 5.3.1.
2020-03-31 13:18:47 -04:00
Paul Garlick 233e1ed3ad
gnu: Add perl-class-mix.
* gnu/packages/perl.scm (perl-class-mix): New variable.
2020-03-31 17:47:06 +01:00
Paul Garlick f73e7fea69
gnu: Add perl-params-classify.
* gnu/packages/perl.scm (perl-params-classify): New variable.
2020-03-31 17:47:05 +01:00
Paul Garlick e3f892ae91
gnu: Add perl-devel-callchecker.
* gnu/packages/perl.scm (perl-devel-callchecker): New variable.
2020-03-31 17:47:04 +01:00
Paul Garlick f83674aa46
gnu: Add perl-dynaloader-functions.
* gnu/packages/perl.scm (perl-dynaloader-functions): New variable.
2020-03-31 17:46:55 +01:00
Ricardo Wurmus 11ef009e7a
gnu: mumi: Update to 0.0.0-9.5fdbc3e.
* gnu/packages/mail.scm (mumi): Update to 0.0.0-9.5fdbc3e.
2020-03-31 17:50:51 +02:00
Arne Babenhauserheide ef4b5f2fed
profiles: Compute manual database entries in parallel.
This provides a 36% speedup on an SSD and 4 cores for the 1.5K man pages
in the manual database derivation of:

  guix environment --ad-hoc jupyter python-ipython python-ipykernel

* guix/profiles.scm (manual-database)[build]: Add 'print-string',
'print', and 'compute-entry'.  Change 'compute-entries' to call
'compute-entry' in 'n-par-map'.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2020-03-31 14:55:42 +02:00
Ludovic Courtès 67cbfeae30
gnu: coreutils: Fix cross-compilation to i586-pc-gnu.
Until now cross-compilation would fail with:

  i586-pc-gnu-ld: src/copy.o: undefined reference to symbol 'file_chauthor'
  i586-pc-gnu-ld: /gnu/store/…-glibc-cross-i586-pc-gnu-2.29/lib/libhurduser.so.0.3: error adding symbols: DSO missing from command line
  collect2: error: ld returned 1 exit status

* gnu/packages/base.scm (coreutils)[arguments]: When 'hurd-target?', add
 #:configure-flags.
2020-03-31 14:55:42 +02:00
Ludovic Courtès 2c33901fb1
ci: Fix 'evaluation-spec' binding.
* guix/ci.scm (<evaluation>)[spec]: Add "specification", which is what
the JSON field is actually called.
2020-03-31 14:55:42 +02:00
Ludovic Courtès 06efbe2fba
gnu: hwloc@2: Update to 2.2.0.
* gnu/packages/mpi.scm (hwloc-2): Update to 2.2.0.
2020-03-31 14:55:42 +02:00
Ludovic Courtès 8db4e704dc
gnu: hwloc@2: Skip test that fails on emulated hardware.
Works around <https://bugs.gnu.org/40342>.

* gnu/packages/mpi.scm (hwloc-2)[arguments]: Add
'skip-test-that-fails-on-qemu' phase.
2020-03-31 14:55:42 +02:00
Alexandru-Sergiu Marton 031610aa8a
gnu: scdoc: Update to 1.10.1.
* gnu/packages/man.scm (scdoc): Update to 1.10.1.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-03-31 15:51:07 +03:00
Tobias Geerinckx-Rice 4b163550bd
gnu: Order module imports in (gnu packages ntp).
This shouldn't cause any conflicts :-)

* gnu/packages/ntp.scm: Order module imports alphabetically.
2020-03-31 14:30:39 +02:00
Tobias Geerinckx-Rice 5acea98e4b
gnu: sonic: Fix installation directories.
* gnu/packages/speech.scm (sonic)[arguments]: Replace erroneous use of
DESTDIR with PREFIX.  Add the required ‘rpath’ LDFLAGS together with a
‘respect-LDFLAGS’ phase.
2020-03-31 14:30:39 +02:00
Tobias Geerinckx-Rice f255bec634
gnu: hexchat: Fix typo in synopsis.
* gnu/packages/messaging.scm (hexchat)[synopsis]: Lowercase ‘client’.
2020-03-31 14:30:39 +02:00
Tobias Geerinckx-Rice 4e839a83de
gnu: gmime: Update to 3.2.7.
* gnu/packages/mail.scm (gmime): Update to 3.2.7.
2020-03-31 14:30:39 +02:00
Tobias Geerinckx-Rice 61e079d6c5
gnu: font-rachana: Don't use unstable tarball.
* gnu/packages/fonts.scm (font-rachana)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2020-03-31 14:30:39 +02:00
Tobias Geerinckx-Rice 0736d973d6
gnu: font-rachana: Update to 7.0.3.
* gnu/packages/fonts.scm (font-rachana): Update to 7.0.3.
2020-03-31 14:30:39 +02:00
Ricardo Wurmus 008b1aecf7
gnu: mumi: Update to 0.0.0-8.9f66dbc.
* gnu/packages/mail.scm (mumi): Update to 0.0.0-8.9f66dbc.
2020-03-31 10:36:37 +02:00