c929619b36
gnu: python-pytorch-for-r-torch: Explicitly keep at 1.11.0.
...
* gnu/packages/machine-learning.scm (python-pytorch-for-r-torch): Separate
from python-pytorch by overriding version and source.
2022-07-07 14:02:33 +02:00
563bb6eab1
gnu: Add python-torchvision.
...
* gnu/packages/machine-learning.scm (python-torchvision): New variable.
2022-07-06 17:16:15 +02:00
43cf8861b8
gnu: liblantern: Update to 0.8.0.
...
* gnu/packages/machine-learning.scm (liblantern): Update to 0.8.0.
2022-07-05 16:56:05 +02:00
20f55375dc
gnu: python-pytorch: Update to 1.11.0.
...
* gnu/packages/machine-learning.scm (python-pytorch): Update to 1.11.0.
[source](snippet): Remove now unnecessary "caffe2/onnx/backend.cc"
substitution.
[arguments]: Add 'remove-caffe2-onnx-scripts' phase.
* gnu/packages/patches/python-pytorch-runpath.patch,
gnu/packages/patches/python-pytorch-system-libraries.patch: Update.
2022-07-05 16:56:04 +02:00
b211824f0a
gnu: onnx: Update to 1.12.0.
...
* gnu/packages/machine-learning.scm (onnx): Update to 1.12.0.
2022-07-05 16:56:04 +02:00
64c043e63a
Merge remote-tracking branch 'origin/master' into staging
2022-06-01 12:42:04 +03:00
9a550ba8c9
gnu: Remove python2-autograd.
...
* gnu/packages/machine-learning.scm (python2-autograd): Delete variable.
2022-05-31 14:52:31 -04:00
0837d0aaf1
gnu: Remove python2-fastlmm.
...
* gnu/packages/machine-learning.scm (python2-fastlmm): Delete variable.
2022-05-31 14:52:25 -04:00
1c865e8e1c
gnu: Remove python2-scikit-learn.
...
* gnu/packages/machine-learning.scm (python2-scikit-learn): Delete variable.
(python-scikit-learn)[properties]: Remove the python2-variant property.
2022-05-31 14:52:24 -04:00
e5e0e283ff
Merge branch 'master' into staging
2022-05-16 11:14:42 +03:00
7c204281ff
gnu: openfst: Update to 1.8.2, enable ngram extension
...
This extension is required by some programs that depend on openfst that aren't
yet packaged.
* gnu/packages/machine-learning.scm (openfst): Update to 1.8.2.
[arguments]: New field.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-15 22:49:50 +02:00
d60b9f8d0f
gnu: openfst-1.7.3: Enable ngram-fst extension & C++14 build
...
The extension doesn't build in old versions of openfst such as 1.7.3 without
manually setting CXXFLAGS.
This package definition, including this workaround to build extensions
successfully, will need to be removed once kaldi is fixed upstream and can be
used with up-to-date versions of openfst.
* gnu/packages/machine-learning.scm (openfst-1.7.3)[arguments]: New field.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-15 22:49:50 +02:00
d57a2c2b33
gnu: kaldi: Update to dd107fd, bypass tests
...
Either kaldi's tests are broken or openblas has reintroduced a bug:
- https://github.com/kaldi-asr/kaldi/pull/4421
More testing & fixes required upstream to re-enable the tests later. For now
they'll just have to be ignored.
* gnu/packages/machine-learning.scm (kaldi): Update to dd107fd.
[arguments]: In 'configure' phase, modify "matrix/Makefile".
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-15 22:49:50 +02:00
8c7e4a9698
gnu: openfst: Add 1.7.3 for kaldi
...
Kaldi is currently broken with openfst versions newer than 1.7.3 as it changed
some of its function signatures.
Once Kaldi is patched/fixed, this should be removed.
Reference Issues:
- https://github.com/kaldi-asr/kaldi/issues/4131
- https://github.com/kaldi-asr/kaldi/issues/4393
* gnu/packages/machine-learning.scm (openfst-1.7.3): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-05-15 22:49:50 +02:00
34106c85d8
gnu: python-umap-learn: Update to 0.5.3.
...
* gnu/packages/machine-learning.scm (python-umap-learn): Update to 0.5.3.
[source]: Use git.
[arguments]: New field.
[native-inputs]: Delete python-joblib and python-nose. Add python-pytest.
[propagated-inputs]: Add python-pynndescent and python-tqdm.
[synopsis]: Fix indentation.
[description]: Fix typo and re-indent.
2022-05-12 12:45:55 -04:00
06b0512260
gnu: python-pynndescent: Update to 0.5.6.
...
* gnu/packages/machine-learning.scm (python-pynndescent): Update to 0.5.6.
[phases]{check}: Skip the test_weighted_minkowski test.
[native-inputs, propagated-inputs]: Re-indent.
2022-05-12 12:45:55 -04:00
1d1f44b709
gnu: python-scikit-learn: Parallelize build and test suite.
...
* gnu/packages/machine-learning.scm (python-scikit-learn)
[phases]{configure}: New phase.
{build-ext}: Add '-j' option.
{check}: Add '-n' option.
[native-inputs]: Add python-pytest-xdist.
2022-05-12 12:45:55 -04:00
53a8e8fd6c
gnu: python-hmmlearn: Remove cythonized file.
...
* gnu/packages/machine-learning.scm (python-hmmlearn)[source]: Add
snippet to remove cythonized file.
2022-04-15 02:11:03 +03:00
e378e7a855
gnu: liblantern: Update to 0.7.2.
...
* gnu/packages/machine-learning.scm (liblantern): Update to 0.7.2.
2022-03-15 22:14:39 +01:00
95f9c44362
gnu: liblantern: Update to 0.7.0.
...
* gnu/packages/machine-learning.scm (liblantern): Update to 0.7.0.
2022-03-15 20:18:42 +01:00
d7636c8bb7
gnu: python-pytorch-for-r-torch: Reuse python-pytorch.
...
* gnu/packages/machine-learning.scm (python-pytorch-for-r-torch): Use
definition on python-pytorch, thereby updating to 1.10.2.
2022-03-15 20:18:42 +01:00
7146e553b9
gnu: Add liblantern.
...
* gnu/packages/machine-learning.scm (liblantern): New variable.
2022-02-11 15:44:42 +01:00
7b676317b3
gnu: Add python-pytorch-for-r-torch.
...
* gnu/packages/patches/python-pytorch-1.9.0-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/machine-learning.scm (python-pytorch-for-r-torch): New variable.
2022-02-11 15:44:42 +01:00
8b787eb929
gnu: python-pytorch: Update to 1.10.2.
...
* gnu/packages/machine-learning.scm (python-pytorch): Update to 1.10.2.
2022-02-11 15:44:42 +01:00
c30fa177f3
gnu: xgboost: Update to 1.5.2.
...
* gnu/packages/machine-learning.scm (xgboost, python-xgboost): Update to
1.5.2.
(python-xgboost)[arguments]: Enable previously failing test.
* gnu/packages/patches/xgboost-use-system-dmlc-core.patch: Update patch.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-01-24 12:15:29 +01:00
af36848fb3
gnu: python-scikit-learn: Update to 1.0.2.
...
* gnu/packages/machine-learning.scm (python-scikit-learn): Update to 1.0.2.
2022-01-19 21:41:13 +01:00
276f40fdc3
Merge branch 'version-1.4.0'
...
With resolved conflicts in:
gnu/packages/gnome.scm
gnu/packages/openstack.scm
gnu/packages/python-xyz.scm
2022-01-17 11:47:09 -05:00
18e872b805
gnu: python-scikit-learn: Remove obsolete phase.
...
* gnu/packages/machine-learning.scm (python-scikit-learn)[arguments]
<#:phases>: Remove 'make-files-writable phase.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2022-01-10 11:44:49 -05:00
2522ea38a3
gnu: python-opentsne: Update to 0.6.1.
...
* gnu/packages/machine-learning.scm (python-opentsne): Update to 0.6.1.
[source]<file-name>: Use git-file-name.
[arguments]<#:phases>: Don't return #t. Add 'skip-test phase after 'unpack to
skip a failing test.
2022-01-14 21:29:59 +01:00
0848b5595c
gnu: python-pynndescent: Update to 0.5.5.
...
* gnu/packages/machine-learning.scm (python-pynndescent): Update to 0.5.5.
[arguments]<#:phases>: Override 'check phase.
[native-inputs]: Remove python-nose. Add python-pytest.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-01-14 21:29:58 +01:00
c7ef428a18
gnu: python-scikit-rebate: Update to 0.62.
...
* gnu/packages/machine-learning.scm (python-scikit-rebate): Update to 0.62.
[arguments]: Disable tests.
[native-inputs]: Remove.
2022-01-11 18:36:39 +01:00
06b51c68de
gnu: Add guile-aiscm-next.
...
* gnu/packages/machine-learning.scm (guile-aiscm-next): New variable.
2021-12-28 19:05:32 +01:00
f44305bc13
gnu: guile-aiscm: Remove opencv and tensorflow.
...
* gnu/packages/machine-learning.scm (guile-aiscm)[inputs]: Remove opencv and
tensorflow.
2021-12-28 19:05:32 +01:00
50bd2b331c
gnu: guile-aiscm: Remove timestamp from documentation.
...
* gnu/packages/machine-learning.scm (guile-aiscm)[arguments]: Add phase
'build-reproducibly.
2021-12-28 19:05:32 +01:00
9e644d979d
gnu: tensorflow: Install C headers.
...
* gnu/packages/machine-learning.scm (tensorflow)[arguments]: Add build phase
'patch-cmake-file-to-install-c-headers; move setting of LDFLAGS from
'build-pip-package to 'unpack-third-party-sources; move 'build-pip-package
after 'install phase.
[source]: Add patch.
* gnu/packages/patches/tensorflow-c-api-fix.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-12-28 19:05:32 +01:00
f9d3f74ad2
gnu: Add guile-aiscm.
...
* gnu/packages/machine-learning.scm (guile-aiscm): New variable.
2021-12-27 13:21:05 +01:00
e1c91aae23
gnu: tensorflow: Fix build with newer numpy.
...
* gnu/packages/machine-learning.scm (tensorflow)[arguments]: Rename
'python3.7-compatibility to 'python3.9-compatibility and patch file to allow
building with newer numpy.
2021-12-15 08:31:50 +01:00
76ab15a7c9
gnu: tensorflow: Do not unpack directory.
...
* gnu/packages/machine-learning.scm (tensorflow)[arguments]: Copy Eigen source
code instead of trying to unpack it.
2021-12-14 15:34:44 +01:00
e3196755e6
gnu: Further simplify package inputs.
...
This is the result of running:
./pre-inst-env guix style --input-simplification=safe
and manually undoing changes on a dozen of packages to reduce
rebuilds (derivations for emacs, icecat, and libreoffice are unchanged.)
2021-12-13 22:15:07 +01:00
8394619bac
gnu: Simplify package inputs.
...
This commit was obtained by running:
./pre-inst-env guix style
without any additional argument.
2021-12-13 17:48:25 +01:00
ab445eb4b7
gnu: python2-scikit-learn: Disable one more test.
...
* gnu/packages/machine-learning.scm (python2-scikit-learn)[arguments]: Do not
inherit; remove obsolete 'make-files-writable phase; disable one more failing
test in 'check phase.
2021-12-09 11:17:45 +01:00
4fb363c906
gnu: libsvm: Install header and library.
...
* gnu/packages/machine-learning.scm (libsvm)[arguments]: Add build phase
'build-lib; also install header file and shared library in the 'install phase.
2021-12-09 11:17:45 +01:00
c8060055de
gnu: ocaml-mcl: Add -fcommon to compiler flags.
...
* gnu/packages/machine-learning.scm (ocaml-mcl)[arguments]: Add -fcommon.
2021-12-08 14:31:54 +01:00
c25a6d39f3
gnu: mcl: Add -fcommon to compiler flags.
...
* gnu/packages/machine-learning.scm (mcl)[arguments]: Set CFLAGS.
2021-12-07 12:34:34 +01:00
9bc0f45df5
Merge remote-tracking branch 'origin/master' into core-updates-frozen
2021-12-05 19:17:41 +01:00
cd40978a4b
gnu: randomjungle: Fix compatibility errors.
...
* gnu/packages/machine-learning.scm (randomjungle)[arguments]: Add build phase
'fix-compatibility-errors to patch type errors.
2021-12-02 00:32:12 +01:00
b182e13638
gnu: python-scikit-learn: Update to 1.0.1.
...
* gnu/packages/machine-learning.scm (python-scikit-learn): Update to 1.0.1.
[arguments]: Disable one failing network test.
2021-11-20 16:22:53 +01:00
3d56b8af90
gnu: python-scikit-learn: Run tests conditionally.
...
* gnu/packages/machine-learning.scm (python-scikit-learn)[arguments]: Respect
TESTS? in 'check phase.
2021-11-20 16:22:53 +01:00
443f3e170a
gnu: python-pytorch: Warn of missing test inputs.
...
* gnu/packages/machine-learning.scm (python-pytorch): Add comment.
2021-11-20 12:02:19 +01:00
9a3dffc851
gnu: python-pytorch: Add missing input.
...
* gnu/packages/machine-learning.scm (python-pytorch)[propagated-inputs]: Add
python-click.
2021-11-20 12:02:19 +01:00
1e13f73605
gnu: python-pytorch: Use ADD-INSTALLED-PYTHONPATH.
...
* gnu/packages/machine-learning.scm (python-pytorch)[arguments]: Do not set
PYTHONPATH; use add-installed-pythonpath instead.
2021-11-20 12:02:19 +01:00
3a317f7476
Merge branch 'master' into core-updates-frozen
2021-11-17 23:43:14 +01:00
782e9975dc
gnu: python-pytorch: Update to 1.10.0.
...
* gnu/packages/machine-learning.scm (python-pytorch): Update to 1.10.0.
* gnu/packages/patches/python-pytorch-system-libraries.patch: Adjust.
2021-11-15 17:55:50 +01:00
8b11b4a829
gnu: python-keras: Skip a flaky test.
...
* gnu/packages/machine-learning.scm (python-keras)
[phases]{check}: Also skip the test_stateful_metrics test.
2021-11-11 10:31:29 -05:00
11e7a534f7
gnu: python-keras: Enable parallel tests.
...
* (python-keras)[phases]: Delete trailing #t.
{check}: Honor TESTS?. Run the tests in parallel. Disable PEP8 lint.
2021-11-11 10:31:28 -05:00
92c3d1c3d0
gnu: tensorflow: Enable parallel build (at least partially).
...
There are still many parts of the build that happen sequentially, but at least
this hastens the long build somewhat.
* gnu/packages/machine-learning.scm (tensorflow)[phases]: Remove trailing #t.
{build-pip-package}: Honor the PARALLEL-BUILD? argument.
2021-11-11 10:31:28 -05:00
f0ce5a6051
gnu: abseil-cpp: Update to 20210324.2.
...
But keep the older variant for Tensorflow.
* gnu/packages/cpp.scm (abseil-cpp-20200923.3): Renamed older variant.
(abseil-cpp): New variable.
* gnu/packages/machine-learning.scm (tensorflow-lite)
[inputs]: Adjust to use the older abseil-cpp-20200923.3.
* gnu/packages/rpc.scm (grpc-1.16.1)[native-inputs]: Likewise.
Co-authored-by: Greg Hogan <code@greghogan.com>
2021-11-11 10:31:25 -05:00
a1eca979fb
Merge remote-tracking branch 'origin/master' into core-updates-frozen.
2021-10-12 17:46:23 +00:00
40a6d8eb7d
gnu: Add python-xgboost.
...
* gnu/packages/machine-learning.scm (python-xgboost): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
2021-09-25 16:06:28 -04:00
6e5e60a20c
gnu: Add xgboost.
...
* gnu/packages/machine-learning.scm (xgboost): New variable.
* gnu/packages/patches/xgboost-use-system-dmlc-core.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: Leo Famulari <leo@famulari.name>
2021-09-25 16:06:28 -04:00
7e73fc3bb9
gnu: Add dmlc-core.
...
* gnu/packages/machine-learning.scm (dmlc-core): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
2021-09-25 16:06:23 -04:00
d326dec811
gnu: python-pytorch: Unbundle NNPACK.
...
* gnu/packages/machine-learning.scm (python-pytorch)[source]: Delete
"third_party/NNPACK".
[inputs]: Add NNPACK.
[propagated-inputs]: Remove PYTHON-PEACHPY.
* gnu/packages/patches/python-pytorch-system-libraries.patch: Remove
hunk modifying NNPACK; add hunk to allow the use of our own NNPACK.
2021-09-24 13:48:50 +02:00
8df301d467
gnu: Add NNPACK.
...
* gnu/packages/machine-learning.scm (nnpack): New variable.
* gnu/packages/patches/nnpack-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-09-24 13:48:49 +02:00
d9dfbf886d
Merge branch 'master' into core-updates-frozen
2021-09-07 14:19:08 +02:00
c4133c43c7
Merge branch 'master' into core-updates-frozen
...
Conflicts:
gnu/packages/algebra.scm
gnu/packages/games.scm
gnu/packages/golang.scm
gnu/packages/kerberos.scm
gnu/packages/mail.scm
gnu/packages/python.scm
gnu/packages/ruby.scm
gnu/packages/scheme.scm
gnu/packages/tex.scm
gnu/packages/tls.scm
gnu/packages/version-control.scm
2021-08-12 00:30:27 +02:00
d2e102d4e4
Merge branch 'master' into core-updates-frozen
2021-08-01 23:23:32 +02:00
b029be2ee0
Merge branch 'master' into core-updates-frozen
...
Conflicts:
gnu/packages/bioinformatics.scm
gnu/packages/cmake.scm
gnu/packages/curl.scm
gnu/packages/emacs-xyz.scm
gnu/packages/gpodder.scm
gnu/packages/music.scm
gnu/packages/patches/glibc-bootstrap-system.patch
gnu/packages/python-xyz.scm
gnu/packages/shells.scm
gnu/packages/statistics.scm
2021-07-29 22:34:57 +02:00
630c39d8df
gnu: onnx: Change source to 'git-fetch'.
...
* gnu/packages/machine-learning.scm (onnx)[source]: Change to
'git-fetch'. Add "onnx-skip-model-downloads.patch".
[arguments]: Add 'make-test-directory-writable' phase.
* gnu/packages/patches/onnx-skip-model-downloads.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-07-31 01:03:24 +02:00
fa2d94b5e3
gnu: python-onnx: Rename to "onnx".
...
* gnu/packages/machine-learning.scm (python-onnx): Rename to...
(onnx): ... this, and change 'name' field accordingly.
(python-onnx): New variable.
* gnu/packages/patches/python-onnx-shared-libraries.patch: Rename to...
* gnu/packages/patches/onnx-shared-libraries.patch: ... this.
* gnu/packages/patches/python-onnx-use-system-googletest.patch: Rename
to...
* gnu/packages/patches/onnx-use-system-googletest.patch: ... this.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2021-07-31 01:03:24 +02:00
2b55f914c3
gnu: python-onnx: Install libonnx.so and libonnx_proto.so.
...
* gnu/packages/patches/python-onnx-shared-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/machine-learning.scm (python-onnx)[source]: Use it.
[arguments]: New field.
2021-07-31 01:03:23 +02:00
bb5b6b09dc
gnu: python-onnx: Delete bundled software.
...
* gnu/packages/machine-learning.scm (python-onnx)[source]: Delete
the 'third_party' directory.
2021-07-31 01:03:23 +02:00
3ac3ca367a
gnu: python-onnx: Move comment to the patch header.
...
* gnu/packages/machine-learning.scm (python-onnx): Move patch comment to...
* gnu/packages/patches/python-onnx-use-system-googletest.patch: ... here.
2021-07-31 01:03:23 +02:00
5f9dc326d9
gnu: python-onnx: Update to 1.9.0.
...
* gnu/packages/machine-learning.scm (python-onnx): Update to 1.9.0.
2021-07-31 01:03:23 +02:00
b402a3ec86
gnu: Add XNNPACK.
...
* gnu/packages/machine-learning.scm (xnnpack): New variable.
* gnu/packages/patches/xnnpack-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-07-29 21:54:55 +02:00
c9aee89abf
gnu: python-scikit-learn: Update to 0.24.2.
...
* gnu/packages/machine-learning.scm (python-scikit-learn): Update to 0.24.2.
[arguments]: Remove trailing #t.
2021-08-30 18:29:57 +02:00
5795fbbd0f
gnu: Add python-hmmlearn.
...
* gnu/packages/machine-learning.scm (python-hmmlearn): New variable.
2021-08-27 13:37:30 +02:00
a537ef5e0c
gnu: python-pytorch: Remove leftover comment.
...
* gnu/packages/machine-learning.scm (python-pytorch)[arguments]: Remove
leftover comment.
2021-08-04 18:03:28 +02:00
dd55ad7ff8
gnu: Add python-pytorch.
...
* gnu/packages/machine-learning.scm (python-pytorch): New variable.
* gnu/packages/patches/python-pytorch-runpath.patch,
gnu/packages/patches/python-pytorch-system-libraries.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
2021-08-04 17:22:19 +02:00
38d319d38a
gnu: gemmlowp: Add "generic" variant.
...
* gnu/packages/machine-learning.scm (gemmlowp): New variable, based on
'gemmlowp-for-tensorflow'.
(gemmlowp-for-tensorflow): Rewrite to inherit from GEMMLOWP.
[properties]: New field.
2021-08-04 17:22:19 +02:00
c83d7d68f3
gnu: gloo: Honor #:tests? in 'check' phase.
...
* gnu/packages/machine-learning.scm (gloo)[arguments]: In 'check' phase,
honor #:tests?.
2021-08-04 17:22:19 +02:00
36f7e1d783
gnu: gloo: Update to c22a5cf.
...
* gnu/packages/machine-learning.scm (gloo): Update to c22a5cf.
[inputs]: New field.
2021-08-04 17:22:19 +02:00
c1e4110971
gnu: Add tensorflow-lite.
...
* gnu/packages/machine-learning.scm (tensorflow-lite): New variable.
2021-08-04 11:09:05 +02:00
6da2b35b60
gnu: Add onnx-optimizer.
...
* gnu/packages/machine-learning.scm (onnx-optimizer): New variable.
* gnu/packages/patches/onnx-optimizer-system-library.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-08-02 18:11:33 +02:00
8854acd434
gnu: Add python-hyperopt.
...
* gnu/packages/machine-learning.scm (python-hyperopt): New variable.
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2021-07-25 17:56:58 +02:00
377e9453ca
gnu: Use 'search-input-file' when looking for *.so and *.a.
...
* gnu/packages/bioinformatics.scm (sailfish)[arguments]: Use
'search-input-file' when looking for *.a and *.so.
* gnu/packages/emulators.scm (dolphin-emu): Likewise.
* gnu/packages/engineering.scm (lepton-eda): Likewise.
(pcb): Likewise.
* gnu/packages/golang.scm (go-1.4): Likewise.
(go-1.14): Likewise.
* gnu/packages/haskell.scm (ghc-7): Likewise.
* gnu/packages/irods.scm (irods): Likewise.
* gnu/packages/language.scm (python2-tegaki-pygtk): Likewise.
* gnu/packages/lisp-xyz.scm (sbcl-lzlib): Likewise.
(sbcl-cl-gobject-introspection): Likewise.
(sbcl-cl-ana): Likewise.
(sbcl-cl-libuv): Likewise.
(sbcl-cl-async): Likewise.
(sbcl-mcclim): Likewise.
(sbcl-zstd): Likewise.
(sbcl-cl-opengl): Likewise.
(sbcl-lev): Likewise.
(sbcl-cl-glfw3): Likewise.
* gnu/packages/machine-learning.scm (tensorflow): Likewise.
* gnu/packages/messaging.scm (utox): Likewise.
* gnu/packages/mpi.scm (java-openmpi): Likewise.
* gnu/packages/music.scm (jack-select): Likewise.
* gnu/packages/pascal.scm (fpc): Likewise.
* gnu/packages/python-crypto.scm (python-libnacl): Likewise.
* gnu/packages/python-xyz.scm (python-cairocffi): Likewise.
(python-pyev): Likewise.
(python-pytidylib): Likewise.
* gnu/packages/radio.scm (unixcw): Likewise.
* gnu/packages/rust.scm (rust-1.32): Likewise.
* gnu/packages/security-token.scm (opensc): Likewise.
(python-pyscard): Likewise.
* gnu/packages/selinux.scm (python-setools): Likewise.
* gnu/packages/spice.scm (libcacard): Likewise.
* gnu/packages/telephony.scm (libtgvoip): Likewise.
2021-07-24 16:23:23 +02:00
1ec13efbd2
gnu: Use 'search-input-directory' for the Eigen header directory.
...
* gnu/packages/bioinformatics.scm (sailfish)[arguments]: Use
'search-input-directory' when searching for Eigen headers.
* gnu/packages/bioinformatics.scm (nanopolish): Likewise.
* gnu/packages/machine-learning.scm (tensorflow): Likewise.
2021-07-24 16:23:22 +02:00
0e47fcced4
Merge branch 'master' into core-updates
2021-07-18 19:50:01 +02:00
57a747e15a
gnu: Add python-cmaes.
...
* gnu/packages/machine-learning.scm (python-cmaes): New variable.
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2021-07-08 16:49:06 +02:00
f034264204
Merge branch 'master' into core-updates
...
Conflicts:
gnu/local.mk
gnu/packages/bioinformatics.scm
gnu/packages/django.scm
gnu/packages/gtk.scm
gnu/packages/llvm.scm
gnu/packages/python-web.scm
gnu/packages/python.scm
gnu/packages/tex.scm
guix/build-system/asdf.scm
guix/build/emacs-build-system.scm
guix/profiles.scm
2021-05-09 21:29:46 +02:00
9605f23ff4
gnu: python-opentsne: Update to 0.5.2.
...
* gnu/packages/machine-learning.scm (python-opentsne): Update to 0.5.2.
Signed-off-by: Leo Famulari <leo@famulari.name>
2021-04-25 14:49:57 -04:00
34c09669c9
gnu: python-pynndescent: Update to 0.5.2.
...
* gnu/packages/machine-learning.scm (python-pynndescent): Update to 0.5.2.
Signed-off-by: Leo Famulari <leo@famulari.name>
2021-04-25 14:49:57 -04:00
a8448da0f4
Merge branch 'master' into core-updates
2021-03-06 00:18:30 +00:00
df76cadf57
gnu: python-onnx: Update to 1.8.1.
...
* gnu/packages/machine-learning.scm (python-onnx): Update to 1.8.1.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-02-21 01:26:20 +01:00
96193caaa1
gnu: python-scikit-learn: Update to 0.24.1.
...
* gnu/packages/machine-learning.scm (python-scikit-learn): Update to 0.24.1.
[propagated-inputs]: Add python-threadpoolctl.
(python2-scikit-learn)[inputs,native-inputs,propagated-inputs]: Do not
inherit these fields.
2021-02-19 23:24:05 +01:00
e740cc6140
Merge branch 'master' into core-updates
2021-02-03 09:57:35 +00:00
ef302ba9c3
gnu: kaldi-gstreamer-server: Wrap with GUIX_PYTHONPATH.
...
* gnu/packages/machine-learning.scm (kaldi-gstreamer-server):
[phases]{install}: Replace PYTHONPATH with GUIX_PYTHONPATH.
2021-02-01 11:54:04 -05:00
d42245d401
gnu: Adjust package collection to Wrap using GUIX_PYTHONPATH.
...
This change was automated using:
$ git ls-files | grep .scm | \
xargs sed 's/(getenv "PYTHONPATH")/(getenv "GUIX_PYTHONPATH")/' -i
$ git ls-files | grep .scm | \
xargs sed 's/`("PYTHONPATH"/`("GUIX_PYTHONPATH"/' -i
* gnu/packages/admin.scm (nmap):
(dstat): Wrap using GUIX_PYTHONPATH.
* gnu/packages/audio.scm (jack-2):
(carla): Likewise.
* gnu/packages/benchmark.scm (fio): Likewise.
* gnu/packages/bioinformatics.scm (couger): Likewise.
(gess, find-circ, filtlong, nanopolish): Likewise.
* gnu/packages/cdrom.scm (cdemu-client): Likewise.
* gnu/packages/chemistry.scm (avogadro): Likewise.
* gnu/packages/connman.scm (econnman): Likewise.
* gnu/packages/cups.scm (hplip): Likewise.
* gnu/packages/debug.scm (scanmem): Likewise.
* gnu/packages/display-managers.scm (lightdm): Likewise.
* gnu/packages/ebook.scm (cozy): Likewise.
* gnu/packages/education.scm (anki): Likewise.
* gnu/packages/engineering.scm (kicad, volk, freecad): Likewise.
* gnu/packages/game-development.scm (renpy): Likewise.
* gnu/packages/games.scm (roguebox-adventures)
(seahorse-adventures, kajongg): Likewise.
* gnu/packages/gimp.scm (gimp, glimpse): Likewise.
* gnu/packages/glib.scm (itstool): Likewise.
* gnu/packages/gnome.scm (gnome-music, gtg, rhythmbox): Likewise.
(eolie, d-feet, gedit, caribou, gnome-shell, authenticator)
(gnome-todo, orca, passwordsafe, terminator, setzer)
(libratbag, komikku): Likewise.
* gnu/packages/gps.scm (gpsd): Likewise.
* gnu/packages/gtk.scm (gtk-doc): Likewise.
* gnu/packages/ibus.scm (ibus, ibus-libpinyin, ibus-anthy)
(ibus-libhangul): Likewise.
* gnu/packages/inkscape.scm (inkscape-1.0): Likewise.
* gnu/packages/linux.scm (bcc): Likewise.
* gnu/packages/mail.scm (notifymuch): Likewise.
* gnu/packages/maths.scm (units): Likewise.
* gnu/packages/music.scm (solfege): Likewise.
* gnu/packages/networking.scm (blueman): Likewise.
* gnu/packages/patchutils.scm (patchwork): Likewise.
* gnu/packages/photo.scm (rapid-photo-downloader, entangle): Likewise.
* gnu/packages/plotutils.scm (asymptote): Likewise.
* gnu/packages/presentation.scm (presentty): Likewise.
* gnu/packages/screen.scm (byobu): Likewise.
* gnu/packages/storage.scm (ceph): Likewise.
* gnu/packages/syndication.scm (liferea): Likewise.
* gnu/packages/task-management.scm (blanket): Likewise.
* gnu/packages/text-editors.scm (manuskript): Likewise.
* gnu/packages/version-control.scm (gitless, cgit, git-when-merged)
(git-imerge): Likewise.
* gnu/packages/video.scm (pitivi): Likewise.
* gnu/packages/virtualization.scm (criu): Likewise.
* gnu/packages/xfce.scm (catfish): Likewise.
2021-02-01 11:54:01 -05:00
e3bc7881f2
gnu: ghmm: Do not set PYTHONPATH.
...
* gnu/packages/machine-learning.scm (ghmm): Remove trailing #t.
[phases]: Do not reorder the check phase after the install phase.
{fix-PYTHONPATH}: Remove phase.
2021-02-01 11:53:48 -05:00
4327f06ed5
gnu: tensorflow: Do not alter PYTHONPATH.
...
* gnu/packages/machine-learning.scm (tensorflow)[phases]: Delete trailing #t.
{fix-python-build}: Do not alter PYTHONPATH.
2021-02-01 11:53:48 -05:00
3d72867e10
gnu: Add python-threadpoolctl.
...
* gnu/packages/machine-learning.scm (python-threadpoolctl): New variable.
2021-01-31 16:31:32 +02:00
Ricardo Wurmus
Ludovic Courtès
Efraim Flashner
Maxim Cournoyer
Aurora
Vinicius Monego
Marius Bakke
Sarah Morgensen
Ludovic Courtès
Mathieu Othacehe
Christopher Baines