1dd8359fa2
gnu: bbmap: Update to 39.01.
...
* gnu/packages/bioinformatics.scm (bbmap): Update to 39.01.
2023-01-06 15:12:07 +01:00
f72dc615ab
gnu: bbmap: Use gexp.
...
* gnu/packages/bioinformatics.scm (bbmap)[arguments]: Use gexp.
2023-01-06 15:11:48 +01:00
04ea0e7de4
gnu: nanopolish: Drop input labels.
...
* gnu/packages/bioinformatics.scm (nanopolish)[inputs]: Drop labels.
2023-01-06 15:01:05 +01:00
24e5dbb57a
gnu: nanopolish: Update to 0.14.0.
...
* gnu/packages/bioinformatics.scm (nanopolish): Update to 0.14.0.
[source]: Update snippet.
[arguments]: Use gexp; use cc-for-target; drop #T from build phases.
[inputs]: Add minimap2.
[native-inputs]: Add cmake-minimal.
2023-01-06 14:51:55 +01:00
8ace894681
gnu: filtlong: Use Python 3.
...
* gnu/packages/bioinformatics.scm (filtlong)[inputs]: Replace python-2 with
python-wrapper.
2023-01-06 14:06:13 +01:00
067c8a7445
gnu: filtlong: Use gexp.
...
* gnu/packages/bioinformatics.scm (filtlong)[arguments]: Use gexp.
2023-01-06 14:05:58 +01:00
0070e52ade
gnu: filtlong: Drop input labels.
...
* gnu/packages/bioinformatics.scm (filtlong)[inputs]: Drop labels.
2023-01-06 13:59:04 +01:00
f5ffcd31c2
gnu: filtlong: Remove trailing #T from build phases.
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* gnu/packages/bioinformatics.scm (filtlong)[arguments]: Remove trailing #T.
2023-01-06 13:58:05 +01:00
e20ca244db
gnu: ngless: Use gexp.
...
* gnu/packages/bioinformatics.scm (ngless)[arguments]: Use gexp.
2023-01-06 13:56:34 +01:00
648c370f33
gnu: ngless: Remove trailing #T from build phases.
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* gnu/packages/bioinformatics.scm (ngless)[arguments]: Remove trailing #T.
2023-01-06 13:45:06 +01:00
ba35d6ba12
gnu: Add guile-newra.
...
* gnu/packages/guile-xyz.scm (guile-newra): New variable.
2023-01-06 13:13:32 +01:00
a768b0433e
gnu: Add psascan.
...
* gnu/packages/cpp.scm (psascan): New variable.
2023-01-06 12:28:15 +01:00
8be0a97a81
maint: Add missing modules to the kernel manifest.
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* etc/kernels-manifest.scm: Add missing modules.
2023-01-06 00:16:06 -05:00
4c8149a5f6
gnu: ruby-asciidoctor: Install man page.
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* gnu/packages/ruby.scm (ruby-asciidoctor)
[phases] {install-man-page}: New phase.
2023-01-05 22:49:20 -05:00
ec47da8f49
gnu: ruby-asciidoctor: Update to 2.0.18.
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* gnu/packages/ruby.scm (ruby-asciidoctor): Update to 2.0.18.
[native-inputs]: Sort inputs. Add ruby-open-uri-cached.
[phases]: Delete trailing #t.
[description]: Remove mention of Docbook 4.5, no longer supported.
2023-01-05 22:37:00 -05:00
c2501fa8fc
gnu: anystyle: Update to 1.3.2.
...
* gnu/packages/ruby.scm (anystyle): Update to 1.3.2.
[source]: Adjust URL.
2023-01-05 22:37:00 -05:00
83e6953021
gnu: ruby-unicode-scripts: Update to 1.8.0.
...
* gnu/packages/ruby.scm (ruby-unicode-scripts): Update to 1.8.0. Adjust
indentation.
2023-01-05 22:36:09 -05:00
339382abd7
gnu: ruby-minitest: Update to 5.17.0.
...
* gnu/packages/ruby.scm (ruby-minitest): Update to 5.17.0.
(ruby-minitest-5.14): New variable.
(ruby-minitest-4): Delete trailing #t.
(ruby-byebug): Delete trailing #t.
[native-inputs]: Replace ruby-minitest with ruby-minitest-5.14.
2023-01-05 21:52:52 -05:00
c39b0461d4
gnu: ath9k-htc-firmware: Fix deprecation warnings.
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* gnu/packages/firmware.scm (ath9k-htc-firmware): Invoke cross-binutils using
keyword arguments.
2023-01-05 21:49:25 -05:00
6f8a03fad3
gnu: zfs: Update to 2.1.7.
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* gnu/packages/file-systems.scm (zfs): Update to 2.1.7.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-01-05 23:13:14 +01:00
22ce05b24d
gnu: flightgear: Update to 2020.3.17.
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* gnu/packages/games (flightgear): Update to 2020.3.17.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-01-05 23:11:31 +01:00
71ca992751
gnu: kicad: Update to 6.0.10.
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* gnu/packages/engineering.scm (kicad): Update to 6.0.10.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-01-05 23:09:02 +01:00
1fa8775505
gnu: Add charls.
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* gnu/packages/image-processing.scm (charls): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-01-05 23:05:41 +01:00
c7158acfba
gnu: gpodder: Update to 3.11.0.
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* gnu/packages/gpodder.scm (gpodder): Update to 3.11.0.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-01-05 23:04:16 +01:00
c9b383fb38
doc: Introduce using swap space for hibernation, with examples.
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* doc/guix.texi (Swap Space): Add a concise introduction to hibernation and
specifying a swap space to the kernel to make resume work. Mention space
requirements and the need of an offset for swap files. Include a trivial
example on how to set up a mapped swap volume for hibernation and another one
for a swap file, including how to compute the file offset.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-01-05 23:02:45 +01:00
c10164aee7
gnu: Add yaru-theme
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* gnu/packages/gnome-xyz (yaru-theme): New variable
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-01-05 23:02:42 +01:00
c015eb2a0a
gnu: Add zls.
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* gnu/packages/zig-xyz.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-01-05 22:37:45 +01:00
8b3d0b1849
gnu: Add emacs-ibrowse.
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* gnu/packages/emacs-xyz.scm (emacs-ibrowse): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-01-05 22:18:40 +01:00
e7da6dd6d6
home: shells: Do not escape backslashes in single-quoted strings.
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This is a followup to 73684dc90e
2023-01-05 15:36:29 +01:00
80902fc210
gnu: guile-avahi: Fix cross-compilation.
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Previously ./configure would fail because 'guile.m4' wouldn't be picked
up by 'autoreconf' when generating it.
* gnu/packages/guile-xyz.scm (guile-avahi)[native-inputs]: Add GUILE-3.0.
2023-01-05 15:16:17 +01:00
b5e3701f1a
environment: Avoid false positive on 'PS1' check.
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* guix/scripts/environment.scm (validate-child-shell-environment): Do
not warn when 'PS1' refers to 'GUIX_ENVIRONMENT'.
2023-01-05 15:01:29 +01:00
632e2f7ce1
environment: Simplify 'PS1' suggestion on '--check'.
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* guix/scripts/environment.scm (validate-child-shell-environment): In
'PS1' suggestion, remove 'export' and avoid 'if'.
2023-01-05 15:01:29 +01:00
086df6ef21
system: Define default 'PS1' in /etc/bashrc rather than ~/.bashrc.
...
Users can override 'PS1' in ~/.bashrc if they wish.
Previously, on Guix Home, the "default" 'PS1' would be set in ~/.bashrc
when 'home-bash-configuration-guix-defaults?' is true, preventing users
from overriding it via the 'environment-variables' field of
'home-bash-extension'.
* gnu/system/shadow.scm (%default-bashrc): Remove 'PS1' setting.
* gnu/system.scm (operating-system-etc-service): Define PS1 in
/etc/bashrc.
* gnu/home/services/shells.scm (add-bash-configuration): When
'home-bash-configuration-guix-defaults?' is true, add a default 'PS1' to
~/.bash_profile.
2023-01-05 15:00:27 +01:00
2127e56bd8
system, home: Factorize default '.bashrc'.
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* gnu/system/shadow.scm (%default-bashrc): New variable. Source
/etc/bashrc only if it exists.
(default-skeletons): Use it.
* gnu/home/services/shells.scm (guix-bashrc): Remove.
(add-bash-configuration): Refer to '%default-bashrc' instead.
2023-01-05 14:21:19 +01:00
73684dc90e
home: services: environment-variables: Add support for literal strings.
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* gnu/home/services.scm (<literal-string>): New record type.
(environment-variable-shell-definitions): Split 'shell-quote' into
'quote-string' and 'shell-double-quote'. Add 'shell-single-quote'.
Add clause for 'literal-string' records.
* tests/guix-home.sh: Test it.
* doc/guix.texi (Essential Home Services): Document it.
2023-01-05 14:20:23 +01:00
2c757e8fb4
home: '--version' really says "guix home".
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* guix/scripts/home.scm (%options): Fix argument to 'show-version-and-exit'.
2023-01-05 13:12:24 +01:00
dc7eb6f07a
nls: Update translations.
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* po/guix/ka.po: New file.
* po/guix/LINGUAS: Add it.
* po/packages/uk.po: New file.
* po/packages/LINGUAS: Add it.
2023-01-05 08:14:55 +01:00
658c09333d
gnu: kodi/wayland: Fix syntax error.
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This is a follow-up to commit dbd9305a56
2023-01-04 21:40:46 +01:00
5f83dd03a2
gnu: kodi/wayland: Do not use package/inherit.
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* gnu/packages/kodi.scm (kodi/wayland): Use regular inheritance.
2023-01-04 21:40:20 +01:00
ec5b9fe27e
gnu: bamtools: Build shared libraries.
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* gnu/packages/bioinformatics.scm (bamtools)[arguments]: Build shared
libraries instead of static libs.
2023-01-04 19:49:59 +01:00
c2c93abd18
gnu: zlib: Update to 1.2.12 [fixes CVE-2018-25032].
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https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2018-25032
https://seclists.org/oss-sec/2022/q1/191
* gnu/packages/compression.scm (zlib)[replacement]: New field.
(zlib-1.2.12): New variable.
2023-01-04 12:54:39 -05:00
5fd9d3ba82
gnu: Add sugar.
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* gnu/packages/sugar.scm (sugar): New variable.
2023-01-04 17:16:48 +01:00
2ba9fbd32e
gnu: sugar-toolkit-gtk3: Add missing inputs.
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* gnu/packages/sugar.scm (sugar-toolkit-gtk3)[propagated-inputs]: Add
python-pycairo and python-dateutil.
2023-01-04 17:14:59 +01:00
7bd9994384
gnu: Add python-gwebsockets.
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* gnu/packages/python-web.scm (python-gwebsockets): New variable.
2023-01-04 17:14:33 +01:00
10e1025c63
gnu: Add scallop.
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* gnu/packages/bioinformatics.scm (scallop): New variable.
2023-01-04 17:14:01 +01:00
ddebb5c563
gnu: Add sugar-artwork.
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* gnu/packages/sugar.scm (sugar-artwork): New variable.
2023-01-04 14:19:14 +01:00
e1e76b7ab8
gnu: Add sugar-datastore.
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* gnu/packages/sugar.scm (sugar-datastore): New variable.
2023-01-04 14:08:58 +01:00
12c815e985
gnu: sugar-toolkit-gtk3: Propagate some inputs.
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* gnu/packages/sugar.scm (sugar-toolkit-gtk3)[inputs]: Move gdk-pixbuf,
gobject-introspection, and librsvg-for-system from here...
[native-inputs]: ...and move gtk+ from here...
[propagated-inputs]: ...to here.
2023-01-04 14:06:51 +01:00
201793fd07
gnu: hunspell: Move hunspell and dictionaries to hunspell module.
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Consolidate hunspell and its dictionaries into the (gnu packages hunspell)
module instead of having them scattered about.
* gnu/packages/aspell.scm (aspell-word-list, define-word-list-dictionary,
hunspell-dict-{en, en-au, en-gb, en-gb-ize, en-us}): Remove variables.
* gnu/packages/libreoffice.scm (hunspell, dicollecte-french-dictionary,
define-french-dictionary, hunspell-dict-fr-{classique, moderne, réforme,
toutes-variantes}, hunspell-dict-pl, hunspell-dict-de, hunspell-dict-hu):
Remove variables.
* gnu/packages/hunspell.scm (hunspell, dicollecte-french-dictionary,
define-french-dictionary, hunspell-dict-fr-{classique, moderne, réforme,
toutes-variantes}, hunspell-dict-pl, hunspell-dict-de, hunspell-dict-hu,
aspell-word-list, define-word-list-dictionary, hunspell-dict-{en, en-au,
en-gb, en-gb-ize, en-us}): Add variables.
(hunspell-dictionary): Explicitly declare upstream libreoffice version to
prevent circular dependency.
* gnu/packages/ebook.scm,
gnu/packages/enchant.scm,
gnu/packages/freedesktop.scm,
gnu/packages/gnuzilla.scm,
gnu/packages/kde-frameworks.scm,
gnu/packages/messaging.scm,
gnu/packages/scribus.scm,
gnu/packages/task-management.scm,
gnu/packages/telegram.scm,
gnu/packages/tex.scm,
gnu/packages/text-editors.scm,
gnu/packages/video.scm: Adjust module imports.
2023-01-04 12:40:17 +01:00
d62c65d5ad
gnu: Add sugar-toolkit-gtk3.
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* gnu/packages/sugar.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2023-01-04 11:22:03 +01:00
Ricardo Wurmus
Leo Famulari
Maxim Cournoyer
Brian Cully
Parnikkapore
Peter Polidoro
Tor-björn Claesson
raingloom
Ivan Vilata-i-Balaguer
florhizome
Maya Tomasek
Nicolas Graves
Ludovic Courtès
Julien Lepiller