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125960 Commits (dcfdd70d538d9bb7f82ce2ea1a93d8206d54a4b6)

Author SHA1 Message Date
Sharlatan Hellseher dcfdd70d53
gnu: go-golang-org-x-crypto: Update to 0.14.0.
* gnu/packages/golang-build.scm (go-golang-org-x-crypto): Update to 0.14.0.
[propagated-inputs]: Add go-golang-org-x-net, go-golang-org-x-term and
go-golang-org-x-text.

Change-Id: I0b064137070be75545f012fc7a89280522855e27
2024-06-29 09:37:41 +01:00
Sharlatan Hellseher 0540c0ccb2
gnu: go-golang-org-x-sys: Fix indentation.
* gnu/packages/golang-build.scm (go-golang-org-x-sys): Re indent.

Change-Id: I63f95e9fb8d6d633fbb0642100c60d5df9121730
2024-06-29 09:37:41 +01:00
Sharlatan Hellseher fc9eb91b0c
gnu: go-golang-org-x-sys: Update to 0.21.0.
* gnu/packages/golang-build.scm (go-golang-org-x-sys): Update to 0.21.0.

Change-Id: I0509e9aad319f55641807a28ebbd32b50cf34ede
2024-06-29 09:37:41 +01:00
Sharlatan Hellseher bae99a0c44
gnu: go-golang-org-x-sys: Enable tests.
* gnu/packages/golang-build.scm (go-golang-org-x-sys) [arguments]:
<#:tests>: Enable them.
<#:phases>: Add custom 'check phase.

Change-Id: Ie58ea6f0aa677742307d18cfaafcf6ec381c85c9
2024-06-29 09:37:41 +01:00
Sharlatan Hellseher 5a2a870a58
gnu: go-golang-org-x-sync: Improve description.
* gnu/packages/golang-build.scm (go-golang-org-x-sync) [description]:
Extend and improve description.

Change-Id: Ie5b48230d7bc7bbd03e2af76d3a3660960282291
2024-06-29 09:37:41 +01:00
Sharlatan Hellseher 7e300af164
gnu: go-golang-org-x-sync: Fix indentation.
* gnu/packages/golang-build.scm (go-golang-org-x-sync): Re indent.

Change-Id: I0399635dc8ddd2917b2f5920da883fa0459e7e30
2024-06-29 09:37:40 +01:00
Sharlatan Hellseher 2ead215712
gnu: go-golang-org-x-sync: Update to 0.7.0.
* gnu/packages/golang-build.scm (go-golang-org-x-sync): Update to 0.7.0.

Change-Id: Ifd4e2035b2d6e2e9cec93342a8871cf0ed9f0443
2024-06-29 09:37:40 +01:00
Sharlatan Hellseher 16cf2fea8d
gnu: go-golang-org-x-sync: Enable tests.
* gnu/packages/golang-build.scm (go-golang-org-x-sync): Refresh package style.
[arguments]: <#:phases>: Add custom 'check phase.

Change-Id: Ibee36b53934faed80561d461090cfcfea32b5bfa
2024-06-29 09:37:40 +01:00
Sharlatan Hellseher afbc1cc8b3
gnu: Remove go-golang.org-x-sync-semaphore.
* gnu/packages/golang-build.scm (go-golang.org-x-sync-semaphore): Delete variable.
* gnu/packages/check.scm (actionlint): Adjust inputs.
[inputs]: Remove go-golang.org-x-sync-semaphore.
* gnu/packages/version-control.scm (git-lfs): Likewise.
[propagated-inputs]: Remove go-golang.org-x-sync-semaphore; add go-golang-org-x-sync.

Change-Id: Icf3edfc46696c8b9af79787ff77f7e65852bfef4
2024-06-29 09:37:40 +01:00
Sharlatan Hellseher 9708590d20
gnu: Remove go-golang.org-x-sync-errgroup.
* gnu/packages/golang-build.scm (go-golang.org-x-sync-errgroup): Delete variable.
* gnu/packages/check.scm (actionlint): Adjust inputs.
[inputs]: Remove go-golang.org-x-sync-errgroup; add go-golang-org-x-sync.
* gnu/packages/golang.scm (gotestsum): Likewise.
[native-inputs]: Remove go-golang.org-x-sync-errgroup; add go-golang-org-x-sync.
* gnu/packages/golang.scm (go-github-com-prometheus-procfs): Likewise.
[propagated-inputs]: Remove go-golang.org-x-sync-errgroup; add go-golang-org-x-sync.
* gnu/packages/terminals.scm (go-github-com-junegunn-fzf): Likewise.
[inputs]: Remove go-golang.org-x-sync-errgroup; add go-golang-org-x-sync.
* gnu/packages/version-control.scm (ghq): Likewise.
[inputs]: Remove go-golang.org-x-sync-errgroup; add go-golang-org-x-sync.

Change-Id: If64c30da47ed9cd043798f427f2927b76394f3c4
2024-06-29 09:37:40 +01:00
Sharlatan Hellseher 9cfcc16c2f
gnu: dstask: Apply "-trimpath" flag.
* gnu/packages/task-management.scm (dstask) [arguments]: <#:phases>:
Apply "-trimpath" flag to custom 'build phase.

Change-Id: I71b145cc4cae587fa898d479e1d5580b5f3750da
2024-06-29 09:37:40 +01:00
Sharlatan Hellseher e7349f1f81
gnu: nncp: Apply "-trimpath" flag.
* gnu/packages/uucp.scm (nncp) [arguments]:
<#:phases>: Remove 'remove-go-references phase.
Set BUILDFLAGS=-trimpath to replace 'remove-go-references phase in
'configure phase.

Change-Id: I7cfe14174e38708d36329d8e33ed6bb1ce0ae220
2024-06-29 09:37:40 +01:00
Sharlatan Hellseher 6d520b8c0c
gnu: docker: Apply "-trimpath" flag.
* gnu/packages/docker.scm (docker) [arguments]:
<#:phases>: Remove 'remove-go-references phase.
Set BUILDFLAGS=-trimpath to replace 'remove-go-references phase in
'build phase.

Change-Id: Iada1a8764808d26e476ca8ca87a23061834f78be
2024-06-29 09:37:40 +01:00
Sharlatan Hellseher caf5cfaa0d
gnu: skopeo: Apply "-trimpath" flag.
* gnu/packages/virtualization.scm (skopeo) [arguments]: <#:make-flags>:
Add "-trimpath" to replace 'remove-go-references phase.
<#:phases>: Remove 'remove-go-references phase.

Change-Id: Idab669576282c81d55ec989dc1a64e87b89699ee
2024-06-29 09:37:39 +01:00
Sharlatan Hellseher d2d5a3af3e
gnu: go-github-com-golang-protobuf-proto: Adjust package name.
Rename go-github-com-golang-protobuf-proto to the Golang module name as
seen in go.mod. Due to lack of support of building submodules in
go-build-system 'build phase is omitted and 'check phase is substituted by
custom one providing nested path tests.

* gnu/packages/golang.scm (go-github-com-golang-protobuf-proto): Rename to...
(go-github-com-golang-protobuf): ... this.
<#:unpack-path>: Remove argument.
<#:phases>: Delete 'build phase. Add custom 'check phase and run tests
for all submodules.
(go-github-com-prometheus-common,
go-github-com-matttproud-golang-protobuf-extensions-pbutil)
[propagated-inputs]: Adjust accordingly.

* gnu/packages/golang-check.scm (go-github-com-onsi-gomega)
[propagated-inputs]: Likewise

* gnu/packages/golang-web.scm (go-github-com-golang-groupcache,
go-github-com-quic-go-quic-go)
[propagated-inputs]: Likewise

* gnu/packages/golang-xyz.scm (go-github-com-prometheus-client-model)
[propagated-inputs]: Likewise

* gnu/packages/syncthing.scm (go-github-com-matttproud-golang-protobuf-extensions-pbutil)
[propagated-inputs]: Likewise

Change-Id: I28c11739247a5ebafefd032d04a548a683fa0454
Co-authored-by: Hilton Chain <hako@ultrarare.space>
2024-06-29 09:37:35 +01:00
Hilton Chain 12c72ab2cc
gnu: go-github-com-golang-protobuf-proto: Update to 1.5.3.
* gnu/packages/golang.scm (go-github-com-golang-protobuf-proto): Update to
1.5.3.
[arguments]: Enable tests.
[propagated-inputs]: Add go-google-golang-org-protobuf.

Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-06-29 09:36:57 +01:00
Hilton Chain 3da36f50a1
gnu: go-google-golang-org-protobuf: Update to 1.31.0.
* gnu/packages/golang.scm (go-google-golang-org-protobuf): Update to 1.31.0.
[arguments]: <#:phases>: Remove 'build phase. Add custom 'check phase.
[propagated-inputs]: Remove go-github-com-golang-protobuf-proto.

Co-authored-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Change-Id: Iba7fe94b2a2fa245e24d17affa5edb1531ac835b
2024-06-29 09:36:57 +01:00
Katherine Cox-Buday a8d9741a15
gnu: go-1.22: Disable flakey tests.
* gnu/packages/golang.scm (go-1.22): Disable flakey tests.

Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Change-Id: Iae54b66ca9e330a8a6fafdba23869fccf875aab4
2024-06-29 09:36:56 +01:00
Brennan Vincent e7132e2385
gnu: go-1.22: Update to 1.22.2.
* gnu/packages/golang.scm (go-1.22): Update to 1.22.2.

Change-Id: I2f30d9d851e97399be771e878a9158b56ff08e1b
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-06-29 09:36:56 +01:00
Brennan Vincent db3d397df8
gnu: go-1.22: Update to 1.22.1.
* gnu/packages/golang.scm (go-1.22): Update to 1.22.1.

Change-Id: I4c007f43448b391dfa53c932b6adf8622efc9e43
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-06-29 09:36:56 +01:00
Sharlatan Hellseher dbf3b5daf5
gnu: Remove go-golang-org-x-net-html.
golang.org/x/net is distributed as a single module according to provided
go.mod file. This changes remove the last reference to
golang.org/x/net/html.

* gnu/packages/golang-build.scm (go-golang-org-x-net) [propagated-inputs]: Add
go-golang-org-x-sys, go-golang-org-x-term and go-golang-org-x-text.
(go-golang-org-x-net-html): Remove variable.

* gnu/packages/version-control.scm (ghq) [inputs]: Remove
go-golang-org-x-net-html. Add go-golang-org-x-net.

* gnu/packages/textutils.scm (vale) [inputs]: Remove
go-golang-org-x-net-html. Add go-golang-org-x-net.

Change-Id: Ic275f2f7ccd145edfd376d65bd24599a550e849a
2024-06-29 09:36:56 +01:00
Troy Figiel 11313556c5
gnu: Remove go-etcd-io-bbolt.
go-go-etcd-io-bbolt and go-etcd-io-bbolt are the same version and source
packages. This change removes go-etcd-io-bbolt and keeps
go-go-etcd-io-bbolt.

* gnu/packages/configuration-management.scm (chezmoi) [native-inputs]:
Add go-go-etcd-io-bbolt. Remove go-etcd-io-bbolt.
* gnu/packages/golang.scm (go-etcd-io-bbolt): Remove variable.

Co-authored-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Change-Id: I482f22b77b61d4761390742db2ced570cd4de3bd
2024-06-29 09:36:53 +01:00
Troy Figiel 89e844d825
gnu: go-go-etcd-io-bbolt: Move to (gnu packages golang-xyz).
* gnu/packages/databases.scm (go-go-etcd-io-bbolt): Move from here ...
* gnu/packages/golang-xyz.scm: ... to here.

Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Change-Id: I52e6ea227c417c1997210ecc22725387143df32f
2024-06-29 09:35:58 +01:00
Sharlatan Hellseher 85df67d365
gnu: Add go-go-etcd-io-gofail.
* gnu/packages/golang-check.scm (go-go-etcd-io-gofail): New variable.

Change-Id: I86478db4267cd8559c1d87497f1b635ffe86192d
2024-06-29 09:35:58 +01:00
Efraim Flashner 0fe4e6425e
gnu: Remove go-1.14.
* gnu/packages/golang.scm (go-1.14, go-std-1.14): Remove variables.
(go-1.16): Inherit from go-1.4.

Change-Id: Ie92019e3aa733a8c6f12dfefbc7b140eb1b76c5c
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-06-29 09:35:58 +01:00
Brennan Vincent bbb1a7b5ed
gnu: Add go-1.22 and its standard library.
* gnu/packages/golang.scm (go-1.22): New variable.

* gnu/packages/golang.scm (go-std-1.22): New variable.

Change-Id: I18d92874d4131843e7c6cf0e8d89f2946f7b972d
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-06-29 09:35:58 +01:00
Lars-Dominik Braun 0bce74d458
gnu: Upgrade to Stackage 20.26.
* guix/import/stackage.scm (%default-lts-version): Upgrade to Stackage
20.26.
* gnu/packages/patches/ghc-aeson-encodeDouble.patch: New file.
* gnu/packages/patches/ghc-clock-realfrag.patch: New file.
* gnu/local.mk: Register them.
* gnu/packages/haskell-check.scm (ghc-tasty-hedgehog): Update.
(ghc-tasty-hspec): Update.
(ghc-tasty-expected-failure): Update.
(ghc-quickcheck-instances): Update.
(ghc-quickcheck-io): Update.
(ghc-hspec-contrib): Update.
* gnu/packages/haskell-crypto.scm (ghc-curve25519): Update.
(ghc-tls): Update.
* gnu/packages/haskell-web.scm (ghc-tagsoup): Update.
(ghc-http2): Update.
(ghc-wai-websockets): Update.
(ghc-aeson): Update.
(ghc-clientsession): Update.
(ghc-yesod-core): Update.
(ghc-yesod-persistent): Update.
(ghc-wai-cors): Update.
* gnu/packages/haskell-xyz.scm (ghc-abstract-par): Update.
(ghc-adjunctions): Update.
(ghc-aeson-diff): Update.
(ghc-base16-bytestring): Update.
(ghc-base-compat): Update.
(ghc-base-compat-batteries): Update.
(ghc-basement): Update.
(ghc-bencode): Update.
(ghc-bytestring-handle): Update.
(ghc-c2hs): Update.
(ghc-cassava-megaparsec): Update.
(ghc-cborg): Update.
(ghc-charset): Update.
(ghc-chasingbottoms): Update.
(ghc-clock): Update.
(ghc-cmark-gfm): Update.
(ghc-concurrent-extra): Update.
(ghc-concurrent-output): Update.
(ghc-conduit-extra): Update.
(ghc-constraints): Update.
(ghc-convertible): Update.
(ghc-csv): Update.
(ghc-data-accessor): Update.
(ghc-data-ordlist): Update.
(ghc-dense-linear-algebra): Update.
(ghc-diagrams-core): Update.
(ghc-diff): Update.
(ghc-dual-tree): Update.
(ghc-either): Update.
(ghc-errors): Update.
(ghc-esqueleto): Update.
(ghc-exactprint): Update.
(ghc-extensible-exceptions): Update.
(ghc-fail): Update.
(ghc-filepath-bytestring): Update.
(ghc-fingertree): Update.
(ghc-fmlist): Update.
(ghc-foldl): Update.
(ghc-free): Update.
(ghc-fsnotify): Update.
(ghc-generic-random): Update.
(ghc-genvalidity-property): Update.
(ghc-groups): Update.
(ghc-hackage-security): Update.
(ghc-half): Update.
(ghc-hashtables): Update.
(ghc-haskell-src): Update.
(ghc-haskell-src-exts-util): Update.
(ghc-hourglass): Update.
(ghc-hpack): Update.
(ghc-hslua): Update.
(ghc-hslua-module-system): Update.
(ghc-http-api-data): Update.
(ghc-ini): Update.
(ghc-inline-c): Update.
(ghc-inline-c-cpp): Update.
(ghc-interpolate): Update.
(ghc-intervals): Update.
(ghc-invariant): Update.
(ghc-io-streams): Update.
(ghc-ipynb): Update.
(ghc-kan-extensions): Update.
(ghc-lens): Update.
(ghc-libmpd): Update.
(ghc-libyaml): Update.
(ghc-lifted-async): Update.
(ghc-linear): Update.
(ghc-listlike): Update.
(ghc-logict): Update.
(ghc-lucid): Update.
(ghc-lzma-conduit): Update.
(ghc-magic): Update.
(ghc-microlens-ghc): Update.
(ghc-microlens-mtl): Update.
(ghc-microlens-platform): Update.
(ghc-missingh): Update.
(ghc-mmorph): Update.
(ghc-monad-control): Update.
(ghc-monad-logger): Update.
(ghc-monoid-extras): Update.
(ghc-murmur-hash): Update.
(ghc-ncurses): Update.
(ghc-network-info): Update.
(ghc-newtype-generics): Update.
(ghc-openglraw): Update.
(ghc-text-conversions): Update.
(ghc-text-icu): Update.
(ghc-text-short): Update.
(ghc-text-zipper): Update.
(ghc-parsers): Update.
(ghc-path): Update.
(ghc-peano): Update.
(ghc-persistent): Update.
(ghc-persistent-sqlite): Update.
(ghc-process-extras): Update.
(ghc-indexed-profunctors): Update.
(ghc-project-template): Update.
(ghc-psqueues): Update.
(ghc-random): Update.
(ghc-reducers): Update.
(ghc-refact): Update.
(ghc-regex-posix): Update.
(ghc-resourcet): Update.
(ghc-sdl): Update.
(ghc-sdl2-image): Update.
(ghc-sdl2-mixer): Update.
(ghc-sdl2-ttf): Update.
(ghc-sdl2-gfx): Update.
(ghc-semigroupoids): Update.
(ghc-semigroups): Update.
(ghc-shakespeare): Update.
(ghc-shelly): Update.
(ghc-simple-reflect): Update.
(ghc-size-based): Update.
(ghc-skylighting-format-latex): Update.
(ghc-skylighting-format-ansi): Update.
(ghc-skylighting): Update.
(ghc-sop-core): Update.
(ghc-split): Update.
(ghc-splitmix): Update.
(ghc-statevar): Update.
(ghc-statistics): Update.
(ghc-stm-conduit): Update.
(ghc-storable-complex): Update.
(ghc-storablevector): Update.
(ghc-svg-builder): Update.
(ghc-temporary-rc): Update.
(ghc-terminal-size): Update.
(ghc-text-manipulate): Update.
(ghc-th-abstraction): Update.
(ghc-th-expand-syns): Update.
(ghc-th-lift-instances): Update.
(ghc-th-orphans): Update.
(ghc-timezone-series): Update.
(ghc-timezone-olson): Update.
(ghc-tldr): Update.
(ghc-transformers-compat): Update.
(ghc-exception-transformers): Update.
(ghc-trifecta): Update.
(ghc-turtle): Update.
(ghc-unagi-chan): Update.
(ghc-unexceptionalio): Update.
(ghc-unicode-transforms): Update.
(ghc-unix-compat): Update.
(ghc-unix-time): Update.
(ghc-unliftio): Update.
(ghc-commutative-semigroups): Update.
(ghc-utf8-string): Update.
(ghc-void): Update.
(ghc-wl-pprint-text): Update.
(ghc-x11-xft): Update.
(ghc-xml): Update.
(ghc-xml-hamlet): Update.
(ghc-yaml): Update.
(ghc-zip-archive): Update.
(ghc-zlib): Update.
(ghc-zstd): Update.
(ghc-keys): Update.
(ghc-pointed): Update.
(ghc-lift-type): Update.
(ghc-unicode-collation): Update.
(ghc-citeproc): Update.
(ghc-commonmark): Update.
(ghc-commonmark-extensions): Update.
(ghc-genvalidity-hspec): Update.
(ghc-netlink): Update.
(ghc-doctest-driver-gen): Update.
(ghc-mysql): Update.
(ghc-persistent-qq): Update.
(ghc-persistent-mysql): Update.
(ghc-string-conversions): Update.
(ghc-postgresql-simple): Update.
(ghc-persistent-postgresql): Update.
(ghc-filtrable): Update.
(ghc-hsyaml-aeson): Update.
(ghc-singleton-bool): Update.
(ghc-git-lfs): Update.
(ghc-nothunks): Update.
(ghc-onetuple): Update.
(ghc-doctest-parallel): Update.
(ghc-ordered-containers): Update.
(ghc-hslua-marshalling): Update.
(ghc-gridtables): Update.
(ghc-should-not-typecheck): Update.
(ghc-servant-server): Update.
(ghc-recv): Update.
(ghc-glib): Update.
(ghc-pango): Update.
(ghc-monoidal-containers): Update.
(ghc-newtype): Update.
(ghc-random-shuffle): Update.
(ghc-ref-tf): Update.
* gnu/packages/irc.scm (glirc): Update.
* gnu/packages/purescript.scm (purescript): Update.
* gnu/packages/wm.scm (icewm): Update.
(ghc-xmobar): Update.

Change-Id: I26ef7c2ef06e3075eba3da21947f16708c437f98
2024-06-29 08:56:16 +02:00
Lars-Dominik Braun 55b5c7c9b1
gnu: ghc-9.2: Update to 9.2.8.
* gnu/packages/haskell.scm (ghc-9.2): Update to 9.2.8.

Change-Id: I4cbb48ad166f893a5b7c707505a77effce208b86
2024-06-29 08:56:16 +02:00
Sören Tempel 9236047476
gnu: ghc-9.2: Make Cabal respect GHC_PACKAGE_PATH
**tl;dr** Applying this patch makes Cabal work in Guix environments
and ensures that Cabal picks up Haskell packages installed via Guix.

Guix makes heavy use of GHC_PACKAGE_PATH to make GHC pickup Haskell
packages installed via the Guix package manager. The environment
variable is set using native-search-paths from the GHC packages.

Unfortunately, upstream Cabal does presently not respect
GHC_PACKAGE_PATH. If this environment variable is set, `cabal build`
and other commands will terminate. For building packages, Guix does
not make much use of cabal-install hence this is not as big of an
issue. However, cabal-install does therefore presently not work
out-of-the-box in environments created by Guix. For example,
in `guix shell` environments. This makes it essentially impossible
to use Guix for setting up development environments for Haskell software.

Cabal upstream is aware of this issue and a patch exists to workaround
this problem. The patch is currently not merged upstream due to issues
related to reconfiguration (changing GHC_PACKAGE_PATH between `cabal
configure` and `cabal build`). However, I would argue that this edge
case is not that relevant for Guix and therefore propose including
this patch with the Cabal Guix package. As outlined above, cabal-install
is not usable by default presently, and I would therefore argue that
this is a major improvement over the current situation. I am willing to
work with Cabal upstream to have this issue fixed upstream eventually.

Note that this requires patching the GHC package instead of the
cabal-install package as Guix uses the version of the Cabal package
<https://hackage.haskell.org/package/Cabal> distributed with GHC.

See: https://github.com/haskell/cabal/issues/3728

* gnu/packages/haskell-apps.scm (cabal-install): Include patch
to support the GHC_PACKAGE_PATH environment variable.

Signed-off-by: Sören Tempel <soeren@soeren-tempel.net>
Signed-off-by: Lars-Dominik Braun <lars@6xq.net>
Change-Id: Ib77ffa937b878690d0e2d8964b534842b99da039
2024-06-29 08:56:16 +02:00
Roman Scherer 208c2d63bb
gnu: emacs-ellama: Update to 0.9.11.
* gnu/packages/emacs-xyz.scm (emacs-ellama): Update to 0.9.11.

Change-Id: I80149cc6fb4b48bce8ecc0c031fbceedb21da4d9
Signed-off-by: Andrew Tropin <andrew@trop.in>
2024-06-29 10:53:20 +04:00
Andy Tai 01ea5ebc71
gnu: parallel: Update to 20240622.
* gnu/packages/parallel.scm (parallel): Update to 20240622.

Change-Id: I4cc8b2ded6a3ddcdfebbd1737a4f4268d7909ee8
Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
2024-06-29 12:08:36 +08:00
Wilko Meyer b5dea86d64
gnu: php: Update to 8.3.8.
* gnu/packages/php.scm (php): Update to 8.3.8.

Change-Id: Ia0714520973b537a82d12fb346f3efbadfc11e61
Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
2024-06-29 12:06:29 +08:00
Zheng Junjie 9590fa7617
gnu: flatpak: Pass system icons and fonts.
* gnu/packages/patches/flatpak-fix-fonts-icons.patch: New patch.
* gnu/packages/package-management.scm(flatpak): Use it.
* gnu/local.mk(dist_patch_DATA): Register it.

Change-Id: I0359d0d9bf10120a8b784c910c50d0e4a9b7a616
2024-06-29 12:03:00 +08:00
Afkhami, Navid 385fb14f64
gnu: Add r-rphyloxml.
* gnu/packages/bioinformatics.scm (r-rphyloxml): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
Change-Id: I5b799986064f2af5fe74454f2e78fea7d9947260
2024-06-28 22:37:36 +02:00
Sharlatan Hellseher ae55410e07
gnu: go-github-com-dlclark-regexp2: Move to golang-xyz.
* gnu/packages/golang.scm (go-github-com-dlclark-regexp2): Move from
here ...
* gnu/packages/golang-xyz.scm: ... to here.

Change-Id: I0e355d6d21c604d89c623eaf9c5276c61b40d4c6
2024-06-28 15:15:44 +01:00
Sharlatan Hellseher 51ea1d2fa8
gnu: Add go-github-com-bmatcuk-doublestar-v4.
* gnu/packages/golang.scm (go-github-com-bmatcuk-doublestar-v4): New variable.

Change-Id: I81c9b04f1932b29e2bda7bf06df1ff3bef5caaa3
2024-06-28 15:15:44 +01:00
Sharlatan Hellseher f01a2dd80a
gnu: Add go-github-com-klauspost-cpuid-v2.
* gnu/packages/golang-xyz.scm (go-github-com-klauspost-cpuid-v2): New variable.

Change-Id: I0465af816409325cd8b5b5f339c155d0326338a7
2024-06-28 15:15:44 +01:00
Sharlatan Hellseher e48e8fe8d5
gnu: go-github-com-klauspost-cpuid: Move to golang-xyz.
* gnu/packages/golang.scm (go-github-com-klauspost-cpuid): Move from
here ...
* gnu/packages/golang-xyz.scm: ... to here.

Change-Id: I85bc873816f653bf5e4ce2882259708d5f37ca28
2024-06-28 15:15:43 +01:00
Sharlatan Hellseher 6fed47ad94
gnu: go-github-com-masterminds-semver-v3: Update to 3.2.1.
* gnu/packages/golang-xyz.scm (go-github-com-masterminds-semver-v3): Update to 3.2.1.
[native-inputs]: Add go-github-com-stretchr-testify-next.

Change-Id: I6313394293de4d953a1ef344701d117eab35d237
2024-06-28 15:15:43 +01:00
Sharlatan Hellseher 6d6a344a08
gnu: go-github-com-masterminds-semver: Rename variable.
* gnu/packages/golang-xyz.scm (go-github-com-masterminds-semver): Rename
to go-github-com-masterminds-semver-v3.
[arguments]: <#:import-path>: Reflect import path as seen in go.mod.

* gnu/packages/golang-xyz.scm (go-github-com-masterminds-sprig)
[propagated-inputs]: Replace go-github-com-masterminds-semver with
go-github-com-masterminds-semver-v3.

Change-Id: I43f2231241f02b6f2f01f89f98a72f29929b9376
2024-06-28 15:15:43 +01:00
Sharlatan Hellseher 1526c615bc
gnu: go-github-com-masterminds-semver: Move to golang-xyz.
* gnu/packages/golang.scm (go-github-com-masterminds-semver): Move from
here ...
* gnu/packages/golang-xyz.scm: ... to here.

Change-Id: I267210f30143c29fe1927e7fbf9ae8cdff633092
2024-06-28 15:15:43 +01:00
Sharlatan Hellseher d9f720b7ef
gnu: go-github-com-masterminds-sprig-v3: Enable tests.
* gnu/packages/golang-xyz.scm (go-github-com-masterminds-sprig-v3)
[arguments]: <#:tests?>: Enable them.
<#:phases>: Add 'remove-network-tests phase.

Change-Id: I526f8c7d273ea3d88f8844da97293a1080471c62
2024-06-28 15:15:31 +01:00
Sharlatan Hellseher 1afefe0f0f
gnu: go-github-com-masterminds-sprig: Rename variable.
* gnu/packages/golang-xyz.scm (go-github-com-masterminds-sprig): Rename
to go-github-com-masterminds-sprig-v3.
[arguments]: <#:import-path>: Reflect import path as seen in go.mod.

* gnu/packages/configuration-management.scm (chezmoi) [native-inputs]:
Replace go-github-com-masterminds-sprig with
go-github-com-masterminds-sprig-v3.

Change-Id: I2d171ff9f719e6664266723ae0483f73cef343c5
2024-06-28 14:57:07 +01:00
Sharlatan Hellseher 77ec077071
gnu: chezmoi: Refresh package style.
* gnu/packages/configuration-management.scm (chezmoi): Use G-expressions
and list style, re-indent.
[arguments]: <#:go>: Set to go-1.21.

Change-Id: I5a7a4deffcd8b9102614b3f628a7ddd33ee82633
2024-06-28 14:57:07 +01:00
Sharlatan Hellseher aa32bdfa78
gnu: chezmoi: Remove propagated inputs.
* gnu/packages/configuration-management.scm (chezmoi): Remove propagated inputs.
[native-inputs]: Remove go-github-com-google-uuid,
go-github-com-huandu-xstrings, go-github-com-imdario-mergo,
go-github-com-masterminds-goutils, go-github-com-masterminds-semver,
go-github-com-mitchellh-copystructure,
go-github-com-mitchellh-reflectwalk, and go-golang-org-x-crypto.

Change-Id: Ifeb42652b07827e76c57a0165683200af312faf3
2024-06-28 11:35:06 +01:00
Sharlatan Hellseher 8cf6d28329
gnu: go-github-com-masterminds-sprig: Move to golang-xyz.
* gnu/packages/golang.scm (go-github-com-masterminds-sprig): Move from
here ...
* gnu/packages/golang-xyz.scm: ... to here.

Change-Id: I424ea6887286bdaee67b3f367024c6d7982bcbd2
2024-06-28 11:31:45 +01:00
Sharlatan Hellseher f9a3d7a3d7
gnu: go-github-com-nwaples-rardecode-v2: Rename variable.
* gnu/packages/golang-compression.scm (go-github-com-nwaples-rardecode-v2):
Rename as seen in go.mod to go-github-com-nwaples-rardecode.

Change-Id: Id492ee6c4e5aebdbec9487b6990e2c5fa5dfe62c
2024-06-28 11:30:11 +01:00
Afkhami, Navid 6a7d5cda17
gnu: Add r-rnacrosslinkoo.
* gnu/packages/bioinformatics.scm (r-rnacrosslinkoo): New variable.

Change-Id: I1ca6dcef9c093627c3743d1176e587cf40053ba0
2024-06-28 11:53:19 +02:00
Afkhami, Navid 2c0a3896c1
gnu: Add r-rrna.
* gnu/packages/cran.scm (r-rrna): New variable.

Change-Id: I8ed081ba32453fdae3a10b492a1c5b4f64b50925
2024-06-28 11:44:38 +02:00
Afkhami, Navid cb6e721ea1
gnu: Add r-topdom.
* gnu/packages/cran.scm (r-topdom): New variable.

Change-Id: I63d265470499affc8f0de94f88739c6631281a0d
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2024-06-28 11:41:50 +02:00