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105652 Commits (de32c09563921bee33c907d2f6f6ea4d57541f21)

Author SHA1 Message Date
Ricardo Wurmus 8bfac375aa
gnu: r-bioccheck: Update to 1.34.2. 
* gnu/packages/bioconductor.scm (r-bioccheck): Update to 1.34.2.
 2022-11-24 12:32:11 +01:00
Ricardo Wurmus f9747ecc2c
gnu: r-dose: Update to 3.24.2. 
* gnu/packages/bioconductor.scm (r-dose): Update to 3.24.2.
 2022-11-24 12:32:10 +01:00
Ricardo Wurmus a5ee462b7a
gnu: r-shortread: Update to 1.56.1. 
* gnu/packages/bioconductor.scm (r-shortread): Update to 1.56.1.
 2022-11-24 12:32:10 +01:00
Ricardo Wurmus 3bc54ddeab
gnu: r-chipseeker: Update to 1.34.1. 
* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.34.1.
 2022-11-24 12:32:10 +01:00
Ricardo Wurmus d3696e71a9
gnu: r-deconvr: Update to 1.4.2. 
* gnu/packages/bioconductor.scm (r-deconvr): Update to 1.4.2.
 2022-11-24 12:32:10 +01:00
Ricardo Wurmus 04340b27ba
gnu: r-bambu: Update to 3.0.2. 
* gnu/packages/bioconductor.scm (r-bambu): Update to 3.0.2.
 2022-11-24 12:32:10 +01:00
Ricardo Wurmus 4c0449ba8f
gnu: r-minimal: Simplify build phase. 
* gnu/packages/statistics.scm (r-minimal)[arguments]: Simplify phase
"remove-extraneous-references".
 2022-11-24 12:32:10 +01:00
Ricardo Wurmus a8082fefe0
gnu: r-minimal: Use %store-directory instead of /gnu/store. 
* gnu/packages/statistics.scm (r-minimal)[arguments]: Use %store-directory
instead of hard-coding "/gnu/store" prefix.
 2022-11-24 12:32:10 +01:00
Ricardo Wurmus eeeca2341d
gnu: r-with-tests: Update to 4.2.2. 
* gnu/packages/statistics.scm (r-with-tests): Update to 4.2.2.
[arguments]: Patch DESCRIPTION file of "tools" package to avoid
non-deterministic line break.
 2022-11-24 12:32:09 +01:00
Ricardo Wurmus ffe149ccc5
gnu: r-with-tests: Drop labels from input lists. 
* gnu/packages/statistics.scm (r-with-tests)[native-inputs]: Drop input
labels.
[inputs]: Same.
(r-minimal)[arguments]: Remove lookup of "texlive" package.
 2022-11-24 12:32:09 +01:00
Ricardo Wurmus f3004710fa
gnu: r-ggtern: Update to 3.4.0. 
* gnu/packages/cran.scm (r-ggtern): Update to 3.4.0.
 2022-11-24 12:32:09 +01:00
zimoun 54afdb3de1
gnu: r-phyloseq: Update to 1.42.0. 
* gnu/packages/bioconductor.scm (r-phyloseq): Update to 1.42.0.
 2022-11-24 12:32:09 +01:00
zimoun 9988c60ea3
gnu: r-tximeta: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.16.0.
 2022-11-24 12:32:09 +01:00
zimoun 5140be4c81
gnu: r-tricycle: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-tricycle): Update to 1.6.0.
 2022-11-24 12:32:09 +01:00
zimoun 7a33311bfd
gnu: r-tcgabiolinks: Update to 2.25.3. 
* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.25.3.
 2022-11-24 12:32:09 +01:00
zimoun dde0da5a95
gnu: r-biscuiteer: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-biscuiteer): Update to 1.12.0.
 2022-11-24 12:32:09 +01:00
zimoun 926fe78f73
gnu: r-omnipathr: Update to 3.5.25. 
* gnu/packages/bioconductor.scm (r-omnipathr): Update to 3.5.25.
[propagated-inputs]: Add r-rmarkdown and r-rvest.
 2022-11-24 12:32:08 +01:00
zimoun 3f58454739
gnu: r-omicade4: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-omicade4): Update to 1.38.0.
 2022-11-24 12:32:08 +01:00
zimoun e524c12e06
gnu: r-dmrseq: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.18.0.
 2022-11-24 12:32:08 +01:00
zimoun 95792cda89
gnu: r-dada2: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-dada2): Update to 1.26.0.
 2022-11-24 12:32:08 +01:00
zimoun c2c91d9dfe
gnu: r-bsseq: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-bsseq): Update to 1.34.0.
 2022-11-24 12:32:08 +01:00
zimoun 3b8df103f7
gnu: r-biotmle: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-biotmle): Update to 1.22.0.
 2022-11-24 12:32:08 +01:00
zimoun 3ed0a63106
gnu: r-biotip: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-biotip): Update to 1.12.0.
 2022-11-24 12:32:08 +01:00
zimoun f230df5f4f
gnu: r-bioqc: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-bioqc): Update to 1.26.0.
 2022-11-24 12:32:07 +01:00
zimoun 219b98fee9
gnu: r-bionetstat: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-bionetstat): Update to 1.18.0.
 2022-11-24 12:32:07 +01:00
zimoun 01fb7c35e7
gnu: r-bionet: Update to 1.58.0. 
* gnu/packages/bioconductor.scm (r-bionet): Update to 1.58.0.
 2022-11-24 12:32:07 +01:00
zimoun 1118d6e856
gnu: r-bionero: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-bionero): Update to 1.6.0.
 2022-11-24 12:32:07 +01:00
zimoun 858d9ccd9b
gnu: r-biomvrcns: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-biomvrcns): Update to 1.38.0.
 2022-11-24 12:32:07 +01:00
zimoun c0412736d8
gnu: r-biomvcclass: Update to 1.66.0. 
* gnu/packages/bioconductor.scm (r-biomvcclass): Update to 1.66.0.
 2022-11-24 12:32:07 +01:00
zimoun 3879ddbdb9
gnu: r-mvcclass: Update to 1.72.0. 
* gnu/packages/bioconductor.scm (r-mvcclass): Update to 1.72.0.
 2022-11-24 12:32:07 +01:00
zimoun 4875f37cb6
gnu: r-biomformat: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-biomformat): Update to 1.26.0.
 2022-11-24 12:32:06 +01:00
zimoun ffd5e53e87
gnu: r-biodb: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-biodb): Update to 1.6.0.
 2022-11-24 12:32:06 +01:00
zimoun efc663040b
gnu: r-biocdockermanager: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-biocdockermanager): Update to 1.10.0.
 2022-11-24 12:32:06 +01:00
zimoun 4fcf1f08ec
gnu: r-biocthis: Update to 1.8.1. 
* gnu/packages/bioconductor.scm (r-biocthis): Update to 1.8.1.
 2022-11-24 12:32:06 +01:00
zimoun 3aea2c40d8
gnu: r-basilisk: Update to 1.10.2. 
* gnu/packages/bioconductor.scm (r-basilisk): Update to 1.10.2.
 2022-11-24 12:32:06 +01:00
zimoun f5a514b605
gnu: r-basilisk-utils: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-basilisk-utils): Update to 1.10.0.
 2022-11-24 12:32:06 +01:00
zimoun 925642f837
gnu: r-dir-expiry: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-dir-expiry): Update to 1.6.0.
 2022-11-24 12:32:06 +01:00
zimoun 727cd07d1a
gnu: r-genetclassifier: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-genetclassifier): Update to 1.38.0.
 2022-11-24 12:32:05 +01:00
zimoun dbaad2365a
gnu: r-minet: Update to 3.56.0. 
* gnu/packages/bioconductor.scm (r-minet): Update to 3.56.0.
 2022-11-24 12:32:05 +01:00
zimoun 8ba466faff
gnu: r-biobtreer: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-biobtreer): Update to 1.10.0.
 2022-11-24 12:32:05 +01:00
zimoun 009ac4e3a9
gnu: r-bgeedb: Update to 2.24.0. 
* gnu/packages/bioconductor.scm (r-bgeedb): Update to 2.24.0.
 2022-11-24 12:32:05 +01:00
zimoun 3912f43996
gnu: r-bgeecall: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-bgeecall): Update to 1.14.0.
 2022-11-24 12:32:05 +01:00
zimoun 81cea8424d
gnu: r-beclear: Update to 2.14.0. 
* gnu/packages/bioconductor.scm (r-beclear): Update to 2.14.0.
[propagated-inputs]: Add r-ids.
 2022-11-24 12:32:05 +01:00
zimoun 5604f64c34
gnu: r-megadepth: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-megadepth): Update to 1.8.0.
 2022-11-24 12:32:05 +01:00
zimoun 3823aa40a3
gnu: r-ballgown: Update to 2.30.0. 
* gnu/packages/bioconductor.scm (r-ballgown): Update to 2.30.0.
 2022-11-24 12:32:04 +01:00
zimoun 3ca58a4ff3
gnu: r-guitar: Update to 2.14.0. 
* gnu/packages/bioconductor.scm (r-guitar): Update to 2.14.0.
 2022-11-24 12:32:04 +01:00
zimoun 5950a171ba
gnu: r-chromstar: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-chromstar): Update to 1.24.0.
 2022-11-24 12:32:04 +01:00
zimoun 1ff0bc4e7b
gnu: r-snpstats: Update to 1.48.0. 
* gnu/packages/bioconductor.scm (r-snpstats): Update to 1.48.0.
 2022-11-24 12:32:04 +01:00
zimoun ddc7edf0b3
gnu: r-pathview: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-pathview): Update to 1.38.0.
 2022-11-24 12:32:04 +01:00
zimoun 1315c532de
gnu: r-ldblock: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-ldblock): Update to 1.28.0.
 2022-11-24 12:32:04 +01:00