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1696 Commits (dfc8ccbf5da96a67eb1cade499f0def21e7fdb02)

Author SHA1 Message Date
Ricardo Wurmus 0b13a75716
gnu: Add r-adagio. 
* gnu/packages/cran.scm (r-adagio): New variable.
 2019-12-14 13:35:57 +01:00
Ricardo Wurmus 2a1fd51864
gnu: Add r-adabag. 
* gnu/packages/cran.scm (r-adabag): New variable.
 2019-12-14 13:35:57 +01:00
Ricardo Wurmus 154555e42f
gnu: Add r-acuityview. 
* gnu/packages/cran.scm (r-acuityview): New variable.
 2019-12-14 13:35:57 +01:00
Ricardo Wurmus 5e2ad37684
gnu: Add r-imager. 
* gnu/packages/cran.scm (r-imager): New variable.
 2019-12-14 13:35:57 +01:00
Ricardo Wurmus 7dd1fbf9ee
gnu: Add r-readbitmap. 
* gnu/packages/cran.scm (r-readbitmap): New variable.
 2019-12-14 13:35:57 +01:00
Ricardo Wurmus 6968aa2fe7
gnu: Add r-bmp. 
* gnu/packages/cran.scm (r-bmp): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus 7faa05377e
gnu: Add r-actuar. 
* gnu/packages/cran.scm (r-actuar): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus 1830e0383b
gnu: Add r-expint. 
* gnu/packages/cran.scm (r-expint): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus 5f08fa64f0
gnu: Add r-actogrammr. 
* gnu/packages/cran.scm (r-actogrammr): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus a5d4dc7efb
gnu: Add r-activpalprocessing. 
* gnu/packages/cran.scm (r-activpalprocessing): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus bbaab25396
gnu: Add r-activpal. 
* gnu/packages/cran.scm (r-activpal): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus 6f94a3e5f5
gnu: Add r-activityindex. 
* gnu/packages/cran.scm (r-activityindex): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus 89d4f154b9
gnu: Add r-activitycounts. 
* gnu/packages/cran.scm (r-activitycounts): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus 7f960d81fb
gnu: Add r-activedriver. 
* gnu/packages/cran.scm (r-activedriver): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus 402dae07b5
gnu: Add r-actigraphy. 
* gnu/packages/cran.scm (r-actigraphy): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus 77a5bf938f
gnu: Add r-fda. 
* gnu/packages/cran.scm (r-fda): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus c090b9977c
gnu: Add r-actfrag. 
* gnu/packages/cran.scm (r-actfrag): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus 6790adf338
gnu: Add r-ineq. 
* gnu/packages/cran.scm (r-ineq): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus d024207e7b
gnu: Add r-actcd. 
* gnu/packages/cran.scm (r-actcd): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus 70c0dbe73f
gnu: Add r-gdina. 
* gnu/packages/cran.scm (r-gdina): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus 6f0a5ab098
gnu: Add r-alabama. 
* gnu/packages/cran.scm (r-alabama): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus ffecbcbf51
gnu: Add r-acswr. 
* gnu/packages/cran.scm (r-acswr): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus 0ea0b2dd46
gnu: Add r-acss. 
* gnu/packages/cran.scm (r-acss): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus 07d958fe0e
gnu: Add r-acss-data. 
* gnu/packages/cran.scm (r-acss-data): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus 49e9a9aea2
gnu: Add r-acs. 
* gnu/packages/cran.scm (r-acs): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus d015db6f57
gnu: Add r-acrt. 
* gnu/packages/cran.scm (r-acrt): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus 4b44bfb6ec
gnu: Add r-acrosstic. 
* gnu/packages/cran.scm (r-acrosstic): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus c3f5989c8f
gnu: Add r-treeclust. 
* gnu/packages/cran.scm (r-treeclust): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus 3bc2c21043
gnu: Add r-acrm. 
* gnu/packages/cran.scm (r-acrm): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus 6c2dcba99d
gnu: Add r-dummies. 
* gnu/packages/cran.scm (r-dummies): New variable.
 2019-12-14 13:35:54 +01:00
Ricardo Wurmus 6afc037e74
gnu: Add r-kernelfactory. 
* gnu/packages/cran.scm (r-kernelfactory): New variable.
 2019-12-14 13:35:54 +01:00
Ricardo Wurmus 270529f633
gnu: Add r-genalg. 
* gnu/packages/cran.scm (r-genalg): New variable.
 2019-12-14 13:35:54 +01:00
Ricardo Wurmus f18c0544f6
gnu: Add r-ada. 
* gnu/packages/cran.scm (r-ada): New variable.
 2019-12-14 13:35:54 +01:00
Ricardo Wurmus 56cba940c3
gnu: Add r-acp. 
* gnu/packages/cran.scm (r-acp): New variable.
 2019-12-14 13:35:54 +01:00
Ricardo Wurmus c12227d971
gnu: Add r-acousticndlcoder. 
* gnu/packages/cran.scm (r-acousticndlcoder): New variable.
 2019-12-14 13:35:54 +01:00
Ricardo Wurmus 19172e12ef
gnu: Add r-seewave. 
* gnu/packages/cran.scm (r-seewave): New variable.
 2019-12-14 13:35:54 +01:00
Ricardo Wurmus cb350053da
gnu: Add r-tuner. 
* gnu/packages/cran.scm (r-tuner): New variable.
 2019-12-14 13:35:54 +01:00
Ricardo Wurmus 5d887a0355
gnu: Add r-acopula. 
* gnu/packages/cran.scm (r-acopula): New variable.
 2019-12-14 13:35:54 +01:00
Ricardo Wurmus eff3e8a471
gnu: Add r-acnr. 
* gnu/packages/cran.scm (r-acnr): New variable.
 2019-12-14 13:35:54 +01:00
Ricardo Wurmus 217cd2e3ee
gnu: Add r-r-devices. 
* gnu/packages/cran.scm (r-r-devices): New variable.
 2019-12-14 13:35:53 +01:00
Ricardo Wurmus 2fe1e66c4d
gnu: Add r-r-filesets. 
* gnu/packages/cran.scm (r-r-filesets): New variable.
 2019-12-14 13:35:53 +01:00
Ricardo Wurmus 1c2e3d7d31
gnu: Add r-r-huge. 
* gnu/packages/cran.scm (r-r-huge): New variable.
 2019-12-13 22:41:41 +01:00
Ricardo Wurmus 2dc8723abd
gnu: Add r-acmer. 
* gnu/packages/cran.scm (r-acmer): New variable.
 2019-12-13 22:41:40 +01:00
Ricardo Wurmus 73f055df34
gnu: Add r-acmeeqtl. 
* gnu/packages/cran.scm (r-acmeeqtl): New variable.
 2019-12-13 22:41:40 +01:00
Ricardo Wurmus fa82997fea
gnu: Add r-filematrix. 
* gnu/packages/cran.scm (r-filematrix): New variable.
 2019-12-13 22:41:40 +01:00
Ricardo Wurmus 542590c5a3
gnu: Add r-acm4r. 
* gnu/packages/cran.scm (r-acm4r): New variable.
 2019-12-13 22:41:40 +01:00
Ricardo Wurmus 220557a7f3
gnu: Add r-acid. 
* gnu/packages/cran.scm (r-acid): New variable.
 2019-12-13 22:41:40 +01:00
Ricardo Wurmus 6cc356c353
gnu: Add r-gamlss. 
* gnu/packages/cran.scm (r-gamlss): New variable.
 2019-12-13 22:41:40 +01:00
Ricardo Wurmus 3b89a8af7a
gnu: Add r-gamlss-data. 
* gnu/packages/cran.scm (r-gamlss-data): New variable.
 2019-12-13 22:41:40 +01:00
Ricardo Wurmus a8a7ba9acb
gnu: Add r-acfmperiod. 
* gnu/packages/cran.scm (r-acfmperiod): New variable.
 2019-12-13 22:41:40 +01:00
Ricardo Wurmus 43a70edc29
gnu: Add r-acet. 
* gnu/packages/cran.scm (r-acet): New variable.
 2019-12-13 22:41:40 +01:00
Ricardo Wurmus 1442ca7340
gnu: Add r-acebayes. 
* gnu/packages/cran.scm (r-acebayes): New variable.
 2019-12-13 22:41:40 +01:00
Ricardo Wurmus 390bc8726b
gnu: Add r-lhs. 
* gnu/packages/cran.scm (r-lhs): New variable.
 2019-12-13 22:41:39 +01:00
Ricardo Wurmus e6bf147293
gnu: Add r-randtoolbox. 
* gnu/packages/cran.scm (r-randtoolbox): New variable.
 2019-12-13 22:41:39 +01:00
Ricardo Wurmus ca1bc50cad
gnu: Add r-rngwell. 
* gnu/packages/cran.scm (r-rngwell): New variable.
 2019-12-13 22:41:39 +01:00
Ricardo Wurmus b441dac7af
gnu: Add r-ace2fastq. 
* gnu/packages/cran.scm (r-ace2fastq): New variable.
 2019-12-13 22:41:39 +01:00
Ricardo Wurmus b8d52fe277
gnu: Add r-accsda. 
* gnu/packages/cran.scm (r-accsda): New variable.
 2019-12-13 22:41:39 +01:00
Ricardo Wurmus 7199d2a5fc
gnu: Add r-sparselda. 
* gnu/packages/cran.scm (r-sparselda): New variable.
 2019-12-13 22:41:39 +01:00
Ricardo Wurmus c909b710a4
gnu: Add r-elasticnet. 
* gnu/packages/cran.scm (r-elasticnet): New variable.
 2019-12-13 22:41:39 +01:00
Ricardo Wurmus 7e2e46cbe2
gnu: Add r-mda. 
* gnu/packages/cran.scm (r-mda): New variable.
 2019-12-13 22:41:39 +01:00
Ricardo Wurmus 592d423ca5
gnu: Add r-accrued. 
* gnu/packages/cran.scm (r-accrued): New variable.
 2019-12-13 22:41:39 +01:00
Ricardo Wurmus c5b86d3a18
gnu: Add r-accrual. 
* gnu/packages/cran.scm (r-accrual): New variable.
 2019-12-13 22:41:39 +01:00
Ricardo Wurmus f9d9c83183
gnu: Add r-tcltk2. 
* gnu/packages/cran.scm (r-tcltk2): New variable.
 2019-12-13 22:41:38 +01:00
Ricardo Wurmus 5a5431e406
gnu: Add r-fgui. 
* gnu/packages/cran.scm (r-fgui): New variable.
 2019-12-13 22:41:38 +01:00
Ricardo Wurmus bba4ec62e3
gnu: Add r-smpracticals. 
* gnu/packages/cran.scm (r-smpracticals): New variable.
 2019-12-13 22:41:38 +01:00
Ricardo Wurmus 0379a16761
gnu: Add r-accept. 
* gnu/packages/cran.scm (r-accept): New variable.
 2019-12-13 22:41:38 +01:00
Ricardo Wurmus bd74d7e6fc
gnu: Add r-abtest. 
* gnu/packages/cran.scm (r-abtest): New variable.
 2019-12-13 22:41:38 +01:00
Ricardo Wurmus a99c4c7584
gnu: Add r-abstractr. 
* gnu/packages/cran.scm (r-abstractr): New variable.
 2019-12-13 22:41:38 +01:00
Ricardo Wurmus 2ecd4e3bfd
gnu: Add r-emojifont. 
* gnu/packages/cran.scm (r-emojifont): New variable.
 2019-12-13 22:41:38 +01:00
Ricardo Wurmus d7937243ba
gnu: Add r-showtext. 
* gnu/packages/cran.scm (r-showtext): New variable.
 2019-12-13 22:41:38 +01:00
Ricardo Wurmus 369e1bb6a8
gnu: Add r-showtextdb. 
* gnu/packages/cran.scm (r-showtextdb): New variable.
 2019-12-13 22:41:38 +01:00
Ricardo Wurmus 322e8d8579
gnu: Add r-sysfonts. 
* gnu/packages/cran.scm (r-sysfonts): New variable.
 2019-12-13 22:41:38 +01:00
Ricardo Wurmus 8990fc1584
gnu: Add r-rintrojs. 
* gnu/packages/cran.scm (r-rintrojs): New variable.
 2019-12-13 22:41:37 +01:00
Ricardo Wurmus 3e33377767
gnu: Add r-abemus. 
* gnu/packages/cran.scm (r-abemus): New variable.
 2019-12-13 22:41:37 +01:00
Ricardo Wurmus ae07172c65
gnu: Add r-abcrlda. 
* gnu/packages/cran.scm (r-abcrlda): New variable.
 2019-12-13 22:41:37 +01:00
Ricardo Wurmus 84822497c2
gnu: Add r-abcdefba. 
* gnu/packages/cran.scm (r-abcdefba): New variable.
 2019-12-13 22:41:37 +01:00
Ricardo Wurmus 72e5c6e95f
gnu: Add r-rglpk. 
* gnu/packages/cran.scm (r-rglpk): New variable.
 2019-12-13 22:41:37 +01:00
Ricardo Wurmus 647ff4a98b
gnu: Add r-abcadm. 
* gnu/packages/cran.scm (r-abcadm): New variable.
 2019-12-13 22:41:37 +01:00
Ricardo Wurmus 8fed766a7d
gnu: Add r-abc-rap. 
* gnu/packages/cran.scm (r-abc-rap): New variable.
 2019-12-13 22:41:37 +01:00
Ricardo Wurmus 595d950223
gnu: Add r-abacus. 
* gnu/packages/cran.scm (r-abacus): New variable.
 2019-12-13 22:41:37 +01:00
Ricardo Wurmus 6e6fa954af
gnu: r-shiny: Update to 1.4.0. 
* gnu/packages/cran.scm (r-shiny): Update to 1.4.0.
[arguments]: Update list of JavaScript files to replace.
[propagated-inputs]: Add r-fastmap.
 2019-12-13 22:41:37 +01:00
Ricardo Wurmus c20a81eed1
gnu: Add r-fastmap. 
* gnu/packages/cran.scm (r-fastmap): New variable.
 2019-12-13 22:41:37 +01:00
Ricardo Wurmus 303c7d1dff
gnu: Add r-aasea. 
* gnu/packages/cran.scm (r-aasea): New variable.
 2019-12-13 22:41:37 +01:00
Ricardo Wurmus 59beb0d23f
gnu: Add r-networkd3. 
* gnu/packages/cran.scm (r-networkd3): New variable.
 2019-12-13 22:41:36 +01:00
Ricardo Wurmus db07641a67
gnu: Add r-bios2cor. 
* gnu/packages/cran.scm (r-bios2cor): New variable.
 2019-12-13 22:41:36 +01:00
Ricardo Wurmus e44c4cd73c
gnu: Add r-bio3d. 
* gnu/packages/cran.scm (r-bio3d): New variable.
 2019-12-13 22:41:36 +01:00
Ricardo Wurmus ba4fcea499
gnu: r-desolve: Update description. 
* gnu/packages/cran.scm (r-desolve)[description]: Use texinfo syntax.
 2019-12-13 22:41:33 +01:00
Nicolò Balzarotti 6c3021a840
gnu: Add r-lintr. 
* gnu/packages/cran.scm (r-lintr): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-12-11 12:10:15 +01:00
Nicolò Balzarotti bd538a031e
gnu: Add r-cyclocomp. 
* gnu/packages/cran.scm (r-cyclocomp): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-12-11 12:08:19 +01:00
Nicolò Balzarotti f00da07471
gnu: Add r-xmlparsedata. 
* gnu/packages/cran.scm (r-xmlparsedata): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-12-11 12:06:41 +01:00
Nicolò Balzarotti 5d387030e8
gnu: Add r-statcheck. 
* gnu/packages/cran.scm (r-statcheck): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-12-11 12:06:41 +01:00
Ricardo Wurmus bf770d9240
gnu: r-metap: Update to 1.2. 
* gnu/packages/cran.scm (r-metap): Move this from here...
* gnu/packages/bioconductor.scm (r-metap): ...to here and update to 1.2.
[propagated-inputs]: Add r-mutoss and r-tfisher.
 2019-12-09 18:11:20 +01:00
Ricardo Wurmus 151965fab4
gnu: Add r-tfisher. 
* gnu/packages/cran.scm (r-tfisher): New variable.
 2019-12-09 18:11:20 +01:00
Ricardo Wurmus ca0b340142
gnu: r-umap: Update to 0.2.4.0. 
* gnu/packages/cran.scm (r-umap): Update to 0.2.4.0.
 2019-12-09 18:11:20 +01:00
Ricardo Wurmus 88fdfd792f
gnu: r-globals: Update to 0.12.5. 
* gnu/packages/cran.scm (r-globals): Update to 0.12.5.
 2019-12-09 18:11:20 +01:00
Ricardo Wurmus e7e87d3840
gnu: r-renv: Update to 0.9.1. 
* gnu/packages/cran.scm (r-renv): Update to 0.9.1.
 2019-12-09 18:11:19 +01:00
Ricardo Wurmus 59ed55df27
gnu: r-cli: Update to 2.0.0. 
* gnu/packages/cran.scm (r-cli): Update to 2.0.0.
[propagated-inputs]: Add r-fansi and r-glue.
 2019-12-09 18:11:19 +01:00
Ricardo Wurmus 73827e8431
gnu: r-energy: Update to 1.7-7. 
* gnu/packages/cran.scm (r-energy): Update to 1.7-7.
 2019-12-09 18:11:19 +01:00
Ricardo Wurmus 5e97576bc1
gnu: r-callr: Update to 3.4.0. 
* gnu/packages/cran.scm (r-callr): Update to 3.4.0.
 2019-12-09 18:11:19 +01:00
Ricardo Wurmus d8d606300c
gnu: r-uwot: Update to 0.1.5. 
* gnu/packages/cran.scm (r-uwot): Update to 0.1.5.
 2019-12-06 21:39:25 +01:00
Ricardo Wurmus 96fe120b4e
gnu: r-irkernel: Update to 1.1. 
* gnu/packages/cran.scm (r-irkernel): Update to 1.1.
 2019-12-06 21:39:24 +01:00
Ricardo Wurmus bf3ea5ec5e
gnu: r-listenv: Update to 0.8.0. 
* gnu/packages/cran.scm (r-listenv): Update to 0.8.0.
 2019-12-06 21:39:24 +01:00
Ricardo Wurmus 3c8d39e5c0
gnu: r-spam: Update to 2.5-0. 
* gnu/packages/cran.scm (r-spam): Update to 2.5-0.
 2019-12-06 21:39:24 +01:00
Ricardo Wurmus b159b8a760
gnu: r-multicool: Update to 0.1-11. 
* gnu/packages/cran.scm (r-multicool): Update to 0.1-11.
 2019-12-06 21:39:24 +01:00
Ricardo Wurmus 6051268076
gnu: r-factoextra: Update to 1.0.6. 
* gnu/packages/cran.scm (r-factoextra): Update to 1.0.6.
 2019-12-06 21:39:24 +01:00
Ricardo Wurmus 9d617f53ab
gnu: r-renv: Update to 0.9.0. 
* gnu/packages/cran.scm (r-renv): Update to 0.9.0.
 2019-12-06 21:39:24 +01:00
Ricardo Wurmus e8ae22a6e5
gnu: r-openxlsx: Update to 4.1.4. 
* gnu/packages/cran.scm (r-openxlsx): Update to 4.1.4.
[propagated-inputs]: Remove r-rlang.
 2019-12-06 21:39:24 +01:00
Ricardo Wurmus 91a38c56e4
gnu: r-heatmaply: Update to 1.0.0. 
* gnu/packages/cran.scm (r-heatmaply): Update to 1.0.0.
[propagated-inputs]: Add r-egg.
 2019-12-06 21:39:24 +01:00
Ricardo Wurmus 0c836f58cf
gnu: Add r-egg. 
* gnu/packages/cran.scm (r-egg): New variable.
 2019-12-06 21:39:24 +01:00
Ricardo Wurmus 75f021f4a6
gnu: r-cubature: Update to 2.0.4. 
* gnu/packages/cran.scm (r-cubature): Update to 2.0.4.
 2019-12-06 21:39:24 +01:00
Ricardo Wurmus ff653ace8f
gnu: r-geometry: Update to 0.4.5. 
* gnu/packages/cran.scm (r-geometry): Update to 0.4.5.
 2019-12-06 21:39:24 +01:00
Ricardo Wurmus 103eef6442
gnu: r-htmltable: Update to 1.13.3. 
* gnu/packages/cran.scm (r-htmltable): Update to 1.13.3.
 2019-12-06 21:39:24 +01:00
Pierre Neidhardt 88f06fd015
gnu: Really move lisp libraries to lisp-xyz, uglify-js to javascript and stumpwm to wm. 
* gnu/local.mk: Include lisp-xyz.scm.
* gnu/packages/lisp-xyz.scm: New file.
* gnu/packages/lisp.scm: Move all lisp libraries to lisp-xyz.scm, uglify-js to
  javascript.scm and stumpwm to wm.scm.
* gnu/packages/javascript.scm: Add uglify-js.
* gnu/packages/wm.scm: Add stumpwm.
* gnu/packages/bioinformatics.scm: Find uglify-js in javascript.scm.
* gnu/packages/machine-learning.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* gnu/packages/web.scm: Find uglify-js in javascript.scm.
* gnu/packages/web-browsers.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* guix/build-system/minify.scm (default-uglify-js): Find uglify-js in
  javascript module instead of lisp.
 2019-12-05 16:23:06 +01:00
Tobias Geerinckx-Rice d9544d91a6
Revert "gnu: Properly move lisp libraries to lisp-xyz, uglify-js to javascript and stumpwm to wm." 
This reverts commit ac1ee30f4f, which
still breaks ‘guix pull’.
 2019-12-05 15:38:52 +01:00
Pierre Neidhardt ac1ee30f4f
gnu: Properly move lisp libraries to lisp-xyz, uglify-js to javascript and stumpwm to wm. 
* gnu/local.mk: Include lisp-xyz.scm.
* gnu/packages/lisp-xyz.scm: New file.
* gnu/packages/lisp.scm: Move all lisp libraries to lisp-xyz.scm, uglify-js to
  javascript.scm and stumpwm to wm.scm.
* gnu/packages/javascript.scm: Add uglify-js.
* gnu/packages/wm.scm: Add stumpwm.
* gnu/packages/bioinformatics.scm: Find uglify-js in javascript.scm.
* gnu/packages/machine-learning.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* gnu/packages/web.scm: Find uglify-js in javascript.scm.
* gnu/packages/web-browsers.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* guix/build-system/minify.scm (default-uglify-js): Find uglify-js in
  javascript module instead of lisp.
 2019-12-05 13:48:47 +01:00
Marius Bakke 33b59c1a3e
Merge branch 'staging' 2019-12-04 20:12:41 +01:00
Ricardo Wurmus 6a7ac0a829
gnu: r-rspectra: Update to 0.16-0. 
* gnu/packages/cran.scm (r-rspectra): Update to 0.16-0.
 2019-12-03 14:53:59 +01:00
Ricardo Wurmus 8aab9b98cf
gnu: r-sjplot: Update to 2.8.1. 
* gnu/packages/cran.scm (r-sjplot): Update to 2.8.1.
 2019-12-03 14:53:50 +01:00
Ricardo Wurmus de5092bab0
gnu: r-bayesplot: Update to 1.7.1. 
* gnu/packages/cran.scm (r-bayesplot): Update to 1.7.1.
 2019-12-03 14:53:42 +01:00
Ricardo Wurmus 27c2a6a160
gnu: r-maptools: Update to 0.9-9. 
* gnu/packages/cran.scm (r-maptools): Update to 0.9-9.
 2019-12-03 14:53:30 +01:00
Ricardo Wurmus a477a5c357
gnu: r-network: Update to 1.16.0. 
* gnu/packages/cran.scm (r-network): Update to 1.16.0.
 2019-12-03 14:53:22 +01:00
Ricardo Wurmus bce0fcae12
gnu: r-dendextend: Update to 1.13.2. 
* gnu/packages/cran.scm (r-dendextend): Update to 1.13.2.
 2019-12-03 14:53:14 +01:00
Ricardo Wurmus ea5af6e74b
gnu: r-curl: Update to 4.3. 
* gnu/packages/cran.scm (r-curl): Update to 4.3.
 2019-12-03 14:53:01 +01:00
Ricardo Wurmus 5378a1ae49
gnu: r-rvcheck: Update to 0.1.7. 
* gnu/packages/cran.scm (r-rvcheck): Update to 0.1.7.
 2019-12-01 10:57:35 +01:00
Ricardo Wurmus a346c93665
gnu: r-insight: Update to 0.7.1. 
* gnu/packages/cran.scm (r-insight): Update to 0.7.1.
 2019-12-01 10:35:59 +01:00
Ricardo Wurmus 3e3fd3b0f2
gnu: r-algdesign: Update to 1.2.0. 
* gnu/packages/cran.scm (r-algdesign): Update to 1.2.0.
 2019-12-01 10:30:46 +01:00
Ricardo Wurmus 670a010161
gnu: r-sdmtools: Update to 1.1-221.2. 
* gnu/packages/cran.scm (r-sdmtools): Update to 1.1-221.2.
 2019-12-01 10:30:38 +01:00
Ricardo Wurmus 2899a9d439
gnu: r-vioplot: Update to 0.3.4. 
* gnu/packages/cran.scm (r-vioplot): Update to 0.3.4.
 2019-12-01 10:30:31 +01:00
Ricardo Wurmus 7055c62dde
gnu: r-extremes: Update to 2.0-11. 
* gnu/packages/cran.scm (r-extremes): Update to 2.0-11.
 2019-12-01 10:30:18 +01:00
Ricardo Wurmus 076527c354
Revert "gnu: Move lisp libraries to lisp-xyz, uglify-js to javascript and stumpwm to wm." 
This reverts commit abf43a67d5 as it broke "guix pull".
 2019-11-28 21:09:24 +01:00
Pierre Neidhardt abf43a67d5
gnu: Move lisp libraries to lisp-xyz, uglify-js to javascript and stumpwm to wm. 
* gnu/local.mk: Include lisp-xyz.scm.
* gnu/packages/lisp-xyz.scm: New file.
* gnu/packages/lisp.scm: Move all lisp libraries to lisp-xyz.scm, uglify-js to
  javascript.scm and stumpwm to wm.scm.
* gnu/packages/javascript.scm: Add uglify-js.
* gnu/packages/wm.scm: Add stumpwm.
* gnu/packages/bioinformatics.scm: Find uglify-js in javascript.scm.
* gnu/packages/machine-learning.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* gnu/packages/web.scm: Find uglify-js in javascript.scm.
* gnu/packages/web-browsers.scm: Depend on lisp-xyz.scm instead of lisp.scm.
 2019-11-28 19:36:12 +01:00
Ricardo Wurmus 77e7158c1b
gnu: r-jpeg: Move to (gnu packages cran). 
* gnu/packages/image.scm (r-jpeg): Move from here...
* gnu/packages/cran.scm (r-jpeg): ...to here.
 2019-11-28 18:04:28 +01:00
Marius Bakke 34f849a945
Merge branch 'master' into staging 2019-11-28 16:47:01 +01:00
Ricardo Wurmus f71b16e8e4
gnu: r-emmeans: Update to 1.4.3.01. 
* gnu/packages/cran.scm (r-emmeans): Update to 1.4.3.01.
 2019-11-28 14:36:58 +01:00
Ricardo Wurmus 28d940961c
gnu: r-rgdal: Update to 1.4-8. 
* gnu/packages/cran.scm (r-rgdal): Update to 1.4-8.
 2019-11-28 10:03:20 +01:00
Ricardo Wurmus 7b18e6d000
gnu: r-covr: Update to 3.4.0. 
* gnu/packages/cran.scm (r-covr): Update to 3.4.0.
 2019-11-28 10:03:20 +01:00
Ricardo Wurmus 7dcd823978
gnu: r-kohonen: Update to 3.0.10. 
* gnu/packages/cran.scm (r-kohonen): Update to 3.0.10.
[propagated-inputs]: Remove r-mass.
 2019-11-28 10:03:20 +01:00
Ricardo Wurmus bb180e8a7a
gnu: r-grimport2: Update to 0.2-0. 
* gnu/packages/cran.scm (r-grimport2): Update to 0.2-0.
 2019-11-28 10:03:19 +01:00
Ricardo Wurmus e2448b4b14
gnu: r-grimport: Update to 0.9-3. 
* gnu/packages/cran.scm (r-grimport): Update to 0.9-3.
 2019-11-28 10:03:19 +01:00
Ricardo Wurmus 04c3fd85ea
gnu: r-rnifti: Update to 1.0.1. 
* gnu/packages/cran.scm (r-rnifti): Update to 1.0.1.
 2019-11-28 10:03:19 +01:00
Ricardo Wurmus ad6ab1a881
gnu: r-emmeans: Update to 1.4.3. 
* gnu/packages/cran.scm (r-emmeans): Update to 1.4.3.
 2019-11-28 10:03:19 +01:00
Ricardo Wurmus fda807da90
gnu: r-writexl: Update to 1.2. 
* gnu/packages/cran.scm (r-writexl): Update to 1.2.
 2019-11-28 10:03:19 +01:00
Ricardo Wurmus efec58e7ff
gnu: r-factominer: Update to 2.0. 
* gnu/packages/cran.scm (r-factominer): Update to 2.0.
[propagated-inputs]: Add r-ggplot2 and ggrepel.
 2019-11-28 10:03:19 +01:00
Marius Bakke 0897ad7fac
Merge branch 'master' into staging 2019-11-28 00:38:25 +01:00
Ricardo Wurmus dcc7fad001
gnu: r-txtplot: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-txtplot): Move from here...
* gnu/packages/cran.scm (r-txtplot): ...to here.
 2019-11-27 18:36:39 +01:00
zimoun ef7944b94f
gnu: r-subplex: Move to (gnu packages cran). 
* gnu/packages/maths.scm (r-subplex): Move from here...
* gnu/packages/cran.scm (r-subplex): ...to here.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-11-27 18:15:34 +01:00
zimoun 682768deb0
gnu: r-pracma: Move to (gnu packages cran). 
* gnu/packages/maths.scm (r-pracma): Move from here...
* gnu/packages/cran.scm (r-pracma): ...to here.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-11-27 18:15:34 +01:00
zimoun 9bd56b1a77
gnu: r-desolve: Move to (gnu packages cran). 
* gnu/packages/maths.scm (r-desolve): Move from here...
* gnu/packages/cran.scm (r-desolve): ...to here.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-11-27 18:15:34 +01:00
zimoun 0eb59d9eac
gnu: r-quadprog: Move to (gnu packages cran). 
* gnu/packages/maths.scm (r-quadprog): Move from here...
* gnu/packages/cran.scm (r-quadprog): ...to here.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-11-27 18:15:34 +01:00
Ricardo Wurmus 166995af92
gnu: r-future: Update to 1.15.1. 
* gnu/packages/cran.scm (r-future): Update to 1.15.1.
 2019-11-25 15:25:10 +01:00
Ricardo Wurmus 0ee5e9fb75
gnu: r-epi: Update to 2.40. 
* gnu/packages/cran.scm (r-epi): Update to 2.40.
 2019-11-25 15:25:10 +01:00
Ricardo Wurmus b674f87a46
gnu: r-vioplot: Update to 0.3.3. 
* gnu/packages/cran.scm (r-vioplot): Update to 0.3.3.
 2019-11-25 15:25:10 +01:00
Ricardo Wurmus 19600e0810
gnu: r-bookdown: Update to 0.16. 
* gnu/packages/cran.scm (r-bookdown): Update to 0.16.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus 401cc85e61
gnu: r-protviz: Update to 0.5.1. 
* gnu/packages/cran.scm (r-protviz): Update to 0.5.1.
[inputs]: Remove perl and python-2.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus 138fbdf354
gnu: r-rnifti: Update to 1.0.0. 
* gnu/packages/cran.scm (r-rnifti): Update to 1.0.0.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus 2eff036278
gnu: r-tidytree: Update to 0.3.0. 
* gnu/packages/cran.scm (r-tidytree): Update to 0.3.0.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus 3356eb511c
gnu: r-sjplot: Update to 2.8.0. 
* gnu/packages/cran.scm (r-sjplot): Update to 2.8.0.
[propagated-inputs]: Remove r-broom and r-nlme; add r-effectsize and
r-parameters.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus 10faf81097
gnu: r-tidyverse: Update to 1.3.0. 
* gnu/packages/cran.scm (r-tidyverse): Update to 1.3.0.
[propagated-inputs]: Add r-pillar.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus eb6aad884f
gnu: r-parameters: Update to 0.3.0. 
* gnu/packages/cran.scm (r-parameters): Update to 0.3.0.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus a6828e0bf5
gnu: r-abn: Update to 2.2. 
* gnu/packages/cran.scm (r-abn): Update to 2.2.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus f94705d606
gnu: r-limsolve: Update to 1.5.6. 
* gnu/packages/cran.scm (r-limsolve): Update to 1.5.6.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus 3b2c3878f5
gnu: r-prodlim: Update to 2019.11.13. 
* gnu/packages/cran.scm (r-prodlim): Update to 2019.11.13.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus 3d391d2df4
gnu: r-webshot: Update to 0.5.2. 
* gnu/packages/cran.scm (r-webshot): Update to 0.5.2.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus 2cef54c060
gnu: r-insight: Update to 0.7.0. 
* gnu/packages/cran.scm (r-insight): Update to 0.7.0.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus 24edd279e4
gnu: Add r-effectsize. 
* gnu/packages/cran.scm (r-effectsize): New variable.
 2019-11-25 14:05:38 +01:00
Ricardo Wurmus 5b720c15d1
gnu: r-pheatmap: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-pheatmap): Move from here...
* gnu/packages/cran.scm (r-pheatmap): ...to here.
 2019-11-25 14:05:37 +01:00
Ricardo Wurmus 54a8cb963d
gnu: r-scales: Update to 1.1.0. 
* gnu/packages/cran.scm (r-scales): Update to 1.1.0.
[propagated-inputs]: Remove r-rcpp; add r-farver and r-lifecycle.
 2019-11-25 14:05:37 +01:00
Ricardo Wurmus 46130b7bee
gnu: r-scales: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-scales): Move variable from here...
* gnu/packages/cran.scm (r-scales): ...to here.
 2019-11-25 14:05:32 +01:00
Tobias Geerinckx-Rice b93a32977e
gnu: r-biocmanager: Update to 1.30.10. 
* gnu/packages/cran.scm (r-biocmanager): Update to 1.30.10.
 2019-11-23 02:00:41 +01:00
Tobias Geerinckx-Rice 33ac190105
gnu: r-selectr: Update to 0.4-2. 
* gnu/packages/cran.scm (r-selectr): Update to 0.4-2.
 2019-11-23 02:00:40 +01:00
Tobias Geerinckx-Rice 36ca7898b6
gnu: r-algdesign: Update to 1.1-7.3.1. 
* gnu/packages/cran.scm (r-algdesign): Update to 1.1-7.3.1.
 2019-11-23 01:34:21 +01:00
Tobias Geerinckx-Rice 9a3d4216f5
gnu: r-shinyfiles: Update to 0.7.5. 
* gnu/packages/cran.scm (r-shinyfiles): Update to 0.7.5.
 2019-11-23 01:06:39 +01:00
Tobias Geerinckx-Rice ec2014d556
gnu: r-sjstats: Update to 0.17.7. 
* gnu/packages/cran.scm (r-sjstats): Update to 0.17.7.
 2019-11-22 00:22:09 +01:00
Tobias Geerinckx-Rice 0645e72fdd
gnu: r-rms: Update to 5.1-4. 
* gnu/packages/cran.scm (r-rms): Update to 5.1-4.
 2019-11-22 00:22:09 +01:00
Marius Bakke f056553c6b
Merge branch 'master' into staging 2019-11-15 20:11:35 +01:00
Ricardo Wurmus f4061505dc
gnu: r-farver: Update to 2.0.1. 
* gnu/packages/cran.scm (r-farver): Update to 2.0.1.
[propagated-inputs]: Remove r-rcpp.
 2019-11-14 10:14:08 +01:00
Ricardo Wurmus f72874fe26
gnu: r-ggeffects: Update to 0.13.0. 
* gnu/packages/cran.scm (r-ggeffects): Update to 0.13.0.
[propagated-inputs]: Remove r-scales.
 2019-11-14 10:14:08 +01:00
Ricardo Wurmus 389f169a7e
gnu: r-learnr: Update to 0.10.0. 
* gnu/packages/cran.scm (r-learnr): Update to 0.10.0.
[propagated-inputs]: Add r-checkmate, r-ellipsis, and r-renv.
 2019-11-14 10:14:08 +01:00
Ricardo Wurmus a6412edf29
gnu: r-ggfortify: Update to 0.4.8. 
* gnu/packages/cran.scm (r-ggfortify): Update to 0.4.8.
 2019-11-14 10:14:08 +01:00
Ricardo Wurmus 17c5b6fcce
gnu: r-kernlab: Update to 0.9-29. 
* gnu/packages/cran.scm (r-kernlab): Update to 0.9-29.
 2019-11-14 10:14:07 +01:00
Ricardo Wurmus e6f1468c93
gnu: r-bookdown: Update to 0.15. 
* gnu/packages/cran.scm (r-bookdown): Update to 0.15.
 2019-11-14 10:14:07 +01:00
Ricardo Wurmus d4f4b30bbc
gnu: r-future: Update to 1.15.0. 
* gnu/packages/cran.scm (r-future): Update to 1.15.0.
 2019-11-14 10:14:07 +01:00
Ricardo Wurmus 610f2acc7c
gnu: r-rbamtools: Update to 2.16.17. 
* gnu/packages/cran.scm (r-rbamtools): Update to 2.16.17.
 2019-11-14 10:14:06 +01:00
Ricardo Wurmus e5a06add04
gnu: r-fields: Update to 10.0. 
* gnu/packages/cran.scm (r-fields): Update to 10.0.
 2019-11-14 10:14:06 +01:00
Ricardo Wurmus b32172cab6
gnu: r-spam: Update to 2.4-0. 
* gnu/packages/cran.scm (r-spam): Update to 2.4-0.
 2019-11-14 10:14:05 +01:00
Ricardo Wurmus 0da4cb546a
gnu: r-rcppannoy: Update to 0.0.14. 
* gnu/packages/cran.scm (r-rcppannoy): Update to 0.0.14.
 2019-11-14 10:14:05 +01:00
Ricardo Wurmus 5fbd92469d
gnu: r-rvcheck: Update to 0.1.6. 
* gnu/packages/cran.scm (r-rvcheck): Update to 0.1.6.
 2019-11-14 10:14:05 +01:00
Ricardo Wurmus aa3d1dca60
gnu: r-rootsolve: Update to 1.8.1. 
* gnu/packages/cran.scm (r-rootsolve): Update to 1.8.1.
 2019-11-14 10:14:05 +01:00
Ricardo Wurmus 56b88f6c8d
gnu: r-flextable: Update to 0.5.6. 
* gnu/packages/cran.scm (r-flextable): Update to 0.5.6.
 2019-11-14 10:14:05 +01:00
Ricardo Wurmus 7f4025aa83
gnu: r-officer: Update to 0.3.6. 
* gnu/packages/cran.scm (r-officer): Update to 0.3.6.
 2019-11-14 10:14:05 +01:00
Ricardo Wurmus b0fd313e38
gnu: r-rjags: Update to 4-10. 
* gnu/packages/cran.scm (r-rjags): Update to 4-10.
 2019-11-14 10:14:05 +01:00
Ricardo Wurmus 1ca049273c
gnu: r-ggpubr: Update to 0.2.4. 
* gnu/packages/cran.scm (r-ggpubr): Update to 0.2.4.
 2019-11-14 10:14:05 +01:00
Ricardo Wurmus 383ab0daa2
gnu: r-openxlsx: Update to 4.1.3. 
* gnu/packages/cran.scm (r-openxlsx): Update to 4.1.3.
[propagated-inputs]: Add r-rlang and r-stringi.
 2019-11-14 10:14:05 +01:00
Ricardo Wurmus 36b7a23f83
gnu: r-tinytex: Update to 0.17. 
* gnu/packages/cran.scm (r-tinytex): Update to 0.17.
 2019-11-14 10:14:04 +01:00
Ricardo Wurmus 58fb4f3207
gnu: r-xfun: Update to 0.11. 
* gnu/packages/cran.scm (r-xfun): Update to 0.11.
 2019-11-14 10:14:03 +01:00
Ricardo Wurmus aba7435f80
gnu: r-prodlim: Update to 2019.10.13. 
* gnu/packages/cran.scm (r-prodlim): Update to 2019.10.13.
 2019-11-14 10:14:03 +01:00
Ricardo Wurmus 8b4178cd94
gnu: r-rcpp: Update to 1.0.3. 
* gnu/packages/cran.scm (r-rcpp): Update to 1.0.3.
 2019-11-14 10:14:03 +01:00
Ricardo Wurmus 65d81e7513
gnu: r-haven: Update to 2.2.0. 
* gnu/packages/cran.scm (r-haven): Update to 2.2.0.
[propagated-inputs]: Add r-rlang and r-tidyselect.
 2019-11-14 10:14:03 +01:00
Ricardo Wurmus a9b6601908
gnu: Add r-renv. 
* gnu/packages/cran.scm (r-renv): New variable.
 2019-11-14 10:14:03 +01:00
Tobias Geerinckx-Rice 1f09284034
gnu: r-kernlab: Update to 0.9-28. 
* gnu/packages/cran.scm (r-kernlab): Update to 0.9-28.
 2019-11-11 04:50:29 +01:00