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134995 Commits (e0d920b7db3f71c02627d698676339218e03ad63)

Author SHA1 Message Date
Ricardo Wurmus 085cefc3b3
gnu: r-knitr: Update to 1.46.
* gnu/packages/statistics.scm (r-knitr): Update to 1.46.

Change-Id: I0f6cfb86353558514fdb0e50f5626ad493e5bf1f
2024-04-10 15:12:30 +02:00
Ricardo Wurmus 223cdffad2
gnu: r-delaporte: Update to 8.4.0.
* gnu/packages/cran.scm (r-delaporte): Update to 8.4.0.

Change-Id: Iaa241222b4c4d84bb9ded7603f7e5cdf857e40be
2024-04-10 15:12:30 +02:00
Ricardo Wurmus 704eb72d6b
gnu: r-stars: Update to 0.6-5.
* gnu/packages/cran.scm (r-stars): Update to 0.6-5.

Change-Id: I459475640f0626136c7c1b72528f9e38f7dd1b19
2024-04-10 15:12:30 +02:00
Ricardo Wurmus 81392d15c1
gnu: r-scatterpie: Update to 0.2.2.
* gnu/packages/cran.scm (r-scatterpie): Update to 0.2.2.

Change-Id: Iefea7b841a419a129ed69d436b80bf59a7ec8c3f
2024-04-10 15:12:30 +02:00
Ricardo Wurmus d3bb68db27
gnu: r-rsconnect: Update to 1.2.2.
* gnu/packages/cran.scm (r-rsconnect): Update to 1.2.2.
[propagated-inputs]: Add r-pki.

Change-Id: I6dcc1b5566be6117e957366f66e0af35c2242718
2024-04-10 15:12:30 +02:00
Ricardo Wurmus 7bd16ee23b
gnu: r-quanteda: Update to 4.0.1.
* gnu/packages/cran.scm (r-quanteda): Update to 4.0.1.
[inputs]: Add tbb.
[propagated-inputs]: Remove r-rcppparallel; add r-lifecycle.
[native-inputs]: Add pkg-config.

Change-Id: I988b076f65801c9e9f7ebe3fa6d19566aea6308a
2024-04-10 15:12:30 +02:00
Ricardo Wurmus 1fc8488c95
gnu: r-proxyc: Update to 0.4.1.
* gnu/packages/cran.scm (r-proxyc): Update to 0.4.1.
[inputs]: Add tbb.
[propagated-inputs]: Remove r-rcppparallel.

Change-Id: I091b340d9defc5876ab7187b7f890cb839fb23b8
2024-04-10 15:12:30 +02:00
Ricardo Wurmus 9c5e2a7604
gnu: r-dae: Update to 3.2.25.
* gnu/packages/cran.scm (r-dae): Update to 3.2.25.
[propagated-inputs]: Add r-trycatchlog.

Change-Id: I9dfc382185a6f83586fcfa35c9969036cf66193a
2024-04-10 15:12:30 +02:00
Ricardo Wurmus 00b9a0b766
gnu: r-styler: Update to 1.10.3.
* gnu/packages/cran.scm (r-styler): Update to 1.10.3.

Change-Id: I59909dfd5534863eef1a8502dd76c9c172914d56
2024-04-10 15:12:29 +02:00
Ricardo Wurmus affff3c220
gnu: r-nor1mix: Update to 1.3-3.
* gnu/packages/cran.scm (r-nor1mix): Update to 1.3-3.

Change-Id: Ie05b87763a47339c713b3a3c9d4f5c4238f26bd9
2024-04-10 15:12:29 +02:00
Ricardo Wurmus e5a28ad531
gnu: r-tmb: Update to 1.9.11.
* gnu/packages/cran.scm (r-tmb): Update to 1.9.11.

Change-Id: I2168b4a7452ae277eacd7414049ee6fd1429c3ca
2024-04-10 15:12:29 +02:00
Ricardo Wurmus 9d81a735f6
gnu: r-emmeans: Update to 1.10.1.
* gnu/packages/cran.scm (r-emmeans): Update to 1.10.1.

Change-Id: I8d072fdf667a6a267ddc4aeb173db6b88996ff85
2024-04-10 15:12:29 +02:00
Ricardo Wurmus 98d1cce5fa
gnu: r-ggstance: Update to 0.3.7.
* gnu/packages/cran.scm (r-ggstance): Update to 0.3.7.

Change-Id: I29c3f248afc717cf6e623db1d9a6e3cd19fe055f
2024-04-10 15:12:29 +02:00
Ricardo Wurmus 36d643ae21
gnu: r-promises: Update to 1.3.0.
* gnu/packages/cran.scm (r-promises): Update to 1.3.0.

Change-Id: I50c005b222d1beac05e14bf98e719c5e0b06eaf4
2024-04-10 15:12:29 +02:00
Ricardo Wurmus 560a720df1
gnu: r-smoother: Update to 1.3.
* gnu/packages/cran.scm (r-smoother): Update to 1.3.

Change-Id: Ia428b5c8c2896cfdae1445d0dbbe19e75c23ac77
2024-04-10 15:12:29 +02:00
Ricardo Wurmus e5acdf788b
gnu: r-argparser: Update to 0.7.2.
* gnu/packages/cran.scm (r-argparser): Update to 0.7.2.

Change-Id: I2dd93ed20822070b92fe48d4400eb4e87543d5a2
2024-04-10 15:12:29 +02:00
Ricardo Wurmus c6c846c044
gnu: r-hardyweinberg: Update to 1.7.8.
* gnu/packages/cran.scm (r-hardyweinberg): Update to 1.7.8.
[native-inputs]: Add r-knitr and r-rmarkdown.

Change-Id: I877343e49057c8218adcfcf44ad42c26556829fb
2024-04-10 15:12:29 +02:00
Ricardo Wurmus 1b3a417cb6
gnu: r-pvclust: Update to 2.2-0.
* gnu/packages/cran.scm (r-pvclust): Update to 2.2-0.

Change-Id: Ia3397baada3ca9ca0546be7d717f96004c214566
2024-04-10 15:12:29 +02:00
Ricardo Wurmus 00515e7e69
gnu: r-htmltools: Update to 0.5.8.1.
* gnu/packages/cran.scm (r-htmltools): Update to 0.5.8.1.

Change-Id: Ib40ad8eb79e10247d306196894ad4e03c04a582e
2024-04-10 15:12:29 +02:00
Ricardo Wurmus 91d23c1acc
gnu: r-secretbase: Update to 0.4.0.
* gnu/packages/cran.scm (r-secretbase): Update to 0.4.0.

Change-Id: I60499def8f224bb93944448e0c23186641c2c892
2024-04-10 15:12:28 +02:00
Ricardo Wurmus c94de5b451
gnu: r-rticles: Update to 0.27.
* gnu/packages/cran.scm (r-rticles): Update to 0.27.

Change-Id: I7191c908b8df1c98293daa152927a77b91e8dac7
2024-04-10 15:12:28 +02:00
Ricardo Wurmus 86a28d0370
gnu: r-ggstatsplot: Update to 0.12.3.
* gnu/packages/cran.scm (r-ggstatsplot): Update to 0.12.3.

Change-Id: If7ff6313571682ef2380acaca82038539dbca48c
2024-04-10 15:12:28 +02:00
Ricardo Wurmus 49fc4644df
gnu: r-ggstats: Update to 0.6.0.
* gnu/packages/cran.scm (r-ggstats): Update to 0.6.0.

Change-Id: I9997cc7342f829339b8461d609d84dc76057692b
2024-04-10 15:12:28 +02:00
Ricardo Wurmus e3cf4366c9
gnu: r-broom-helpers: Update to 1.15.0.
* gnu/packages/cran.scm (r-broom-helpers): Update to 1.15.0.

Change-Id: I7761a057a694119f56c3e2bd5dd6f0702136d975
2024-04-10 15:12:28 +02:00
Ricardo Wurmus a82e38586a
gnu: r-codedepends: Update to 0.6.6.
* gnu/packages/bioconductor.scm (r-codedepends): Update to 0.6.6.
[native-inputs]: Add r-knitr.

Change-Id: I38378f3c7406166007da48eed749526d6ddb9277
2024-04-10 15:12:28 +02:00
Ricardo Wurmus daf31b4043
gnu: r-valr: Update to 0.8.0.
* gnu/packages/bioconductor.scm (r-valr): Update to 0.8.0.

Change-Id: I9d5a7d2c3600f82db4b291af1485f9d075d26627
2024-04-10 15:12:28 +02:00
Ricardo Wurmus 467e13ce50
gnu: Add r-pki.
* gnu/packages/cran.scm (r-pki): New variable.

Change-Id: Ic8bd9a449b040e66093939e2d64b05e4f97f9bd3
2024-04-10 15:12:28 +02:00
Ricardo Wurmus 525beb6c37
gnu: Add r-trycatchlog.
* gnu/packages/cran.scm (r-trycatchlog): New variable.

Change-Id: I092c8ada3e139e21e07f000041a5e2fc345af977
2024-04-10 15:12:18 +02:00
Zheng Junjie db49eed2d3
gnu: plasma: Fix QtQuickControls2 theme.
Suggested in <https://github.com/NixOS/nixpkgs/issues/79713>.

* gnu/packages/kde-plasma.scm (plasma)[propagated-inputs]: Add qqc2-desktop-style.

Change-Id: I6bbed3ddaa339c25a996b6ab74acbc3179e28269
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2024-04-10 20:02:44 +08:00
Sughosha a1a13268b7
gnu: falkon: Enable KDE Frameworks Integration plugin.
* gnu/packages/kde-internet.scm (falkon)[inputs]: Add kcoreaddons and kcrash.

Change-Id: I5cacc660daea8167bb072c41875d29fbf2caf74b
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2024-04-10 19:54:22 +08:00
宋文武 9acc056725
gnu: kdelibs4support: Fix tests.
Reported in:
  <https://issues.guix.gnu.org/70100>
  <https://issues.guix.gnu.org/70176>

* gnu/packages/kde-frameworks.scm (kdelibs4support)[source]: Add snippet.

Change-Id: I12e16b8003e9b7e857492e51105d7c3580e1c35f
2024-04-10 19:50:33 +08:00
Leo Famulari 8bfa49444d
teams: Remove Björn Höfling from their team due to inactivity.
* etc/teams.scm (Björn Höfling): Remove from the JAVA team.

Change-Id: I384e4aebff18485ea5c5bf444a46dc88a64af72d
2024-04-09 16:21:25 -04:00
Leo Famulari cff5ecaf67
teams: Remove Raghav Gururajan from their teams due to inactivity.
* etc/teams.scm (Raghav Gururajan): Remove from the GNOME and MENTORS teams.

Change-Id: Ic1a583f08636f4cfd34635ab04091844b9957e08
2024-04-09 16:21:24 -04:00
Leo Famulari 0945e9f17a
.guix-authorizations: Remove Björn Höfling due to inactivity.
* .guix-authorizations: Remove hoebjo.

Change-Id: I270cef605de30e1924749ad143f166cca0b54e8d
2024-04-09 16:17:23 -04:00
Leo Famulari d6a6af892a
.guix-authorizations: Remove Raghav Gururajan due to inactivity.
* .guix-authorizations: Remove raghavgururajan.

Change-Id: Iec45c971c4ec4cd1721d9b6299dc44bc7bb1a94e
2024-04-09 16:10:48 -04:00
Efraim Flashner 9a1abc1352
gnu: netpbm: Fix build on powerpc-linux.
* gnu/packages/netpbm.scm (netpbm)[arguments]: Adjust the 'setup-check
phase to skip 2 tests when building for powerpc-linux.

Change-Id: Ie8f23bed0f5d442df3a19e227bbdc3a17fa77511
2024-04-09 20:55:30 +03:00
Sharlatan Hellseher 9a4c57f55f
gnu: vale: Unbundle more packages.
* gnu/packages/textutils.scm (vale):
[source]: Remove more vendored modules.
[native-inputs]: Add go-github-com-fatih-color, go-github-com-gobwas-glob,
go-github-com-mitchellh-go-homedir, go-github-com-yuin-goldmark,
go-golang-org-x-net-html, go-gopkg-in-ini-v1, and
go-gopkg-in-yaml-v2.

Change-Id: Ia7e87888fd286b54157382d01c8a3ca8475e3cb0
2024-04-09 17:14:52 +01:00
Sharlatan Hellseher eed3fcceed
gnu: vale: Refresh package style.
* gnu/packages/textutils.scm (vale):
[source]: Remove some packaged module from vendor.
[arguments]: Move above native-inputs. Swap to list style, do not
install source.
[description]: Fix indentation.

Change-Id: I3efbffc74e76ba2c88467bfc7e79b06d4d05ee18
2024-04-09 17:14:52 +01:00
Sharlatan Hellseher 0f3f787043
gnu: csvdiff: Adjust inputs.
* gnu/packages/textutils.scm (csvdiff): Adjust inputs.
[arguments]: Swap to list style, do not install sources.
[native-inputs]: Swap from propagated-inputs to native-inputs.
Remove indirect Golang modules: go-github-com-mattn-go-colorable,
go-github-com-oneofone-xxhash, go-github-com-spaolacci-murmur3, and
go-golang-org-x-sys.

Change-Id: I903d8869b8c468c15a2e78a565bcaaf34594e34b
2024-04-09 17:14:52 +01:00
Wilko Meyer e8d3d5224e
gnu: Add miller.
* gnu/packages/textutils.scm (miller): New variable.

Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Change-Id: Ic381b5e28e561382c49f843aa1baadf2d2d6f294
2024-04-09 17:14:52 +01:00
Wilko Meyer d43b4d7758
gnu: Add go-github-com-facette-natsort.
* gnu/packages/golang-xyz.scm (go-github-com-facette-natsort): New
variable.

Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Change-Id: I23ab432b5a7f35d2f3144cfd68cfff75683eb592
2024-04-09 17:14:52 +01:00
Wilko Meyer fd38158d7f
gnu: Add go-github-com-johnkerl-lumin.
* gnu/packages/golang-xyz.scm (go-github-com-johnkerl-lumin): New variable.

Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-04-09 17:14:52 +01:00
Wilko Meyer 152b636f88
gnu: Add go-github-com-lestrrat-go-strftime.
* gnu/packages/golang-xyz.scm (go-github-com-lestrrat-go-strftime): New
variable.

Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Change-Id: I8f4fcc42608357c409dc38e63c1b2b1d3083b268
2024-04-09 17:14:52 +01:00
Wilko Meyer 4d1079b9c9
gnu: Add go-github-com-lestrrat-go-envload.
* gnu/packages/golang-xyz.scm (go-github-com-lestrrat-go-envload): New
variable.

Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Change-Id: I6bdf0b026779556bf5a0a89de0c7e868f13c286d
2024-04-09 17:14:52 +01:00
Wilko Meyer ff5ef67110
gnu: diffoscope: Update to 263.
* gnu/packages/diffoscope.scm (diffoscope): Update to 263.

Change-Id: I8c9fce87dcf78fbc0f5ed319fa9e8b6d2e37fee1
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-04-09 17:07:05 +01:00
Andre A. Gomes 83e39340ea
gnu: nyxt: Update to 3.11.6.
* gnu/packages/web-browsers.scm (nyxt): Update to 3.11.6.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-04-09 17:06:44 +01:00
VÖRÖSKŐI András 3ee46d58a4
gnu: tracy: Update to 0.10.
* gnu/packages/profiling.scm (tracy, tracy-wayland): Update to 0.10.

Change-Id: Iee2d306e97aff88575286e2da78430be8014b35c
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-04-09 17:05:17 +01:00
Simon Tournier cf29c427e9
gnu: python-deeptools: Update to 3.5.5.
* gnu/packages/bioinformatics.scm (python-deeptools): Update to 3.5.5.
[build-system]: Replace by pyproject-build-system.
[arguments]: Add phase that fixes 'test/test_tools.py'.

Change-Id: Ibb51939275c96df2c4a1e248a03d683f2f4904ac
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-04-09 17:04:02 +01:00
Andy Tai ac3f7bad67
gnu: stow: Update to 2.4.0.
* gnu/packages/package-management.scm (stow): Update to 2.4.0.

Change-Id: Icc5b81b98fc3dc53d03430fa90c2793e7ef8970d
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-04-09 17:03:38 +01:00
Wilko Meyer 191a4bfe1a
gnu: glmark2: Update to 2023.01.
* gnu/packages/gl.scm (glmark2): Update to 2023.01.

Change-Id: Ia3a468d5da28801fc9c13de6995ca6599bbbb87c
Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-04-09 17:03:06 +01:00