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Author SHA1 Message Date
Ludovic Courtès 6d2b43915f syscalls: 'terminal-columns' ignores non-file ports.
* guix/build/syscalls.scm (terminal-columns): Call
'terminal-window-size' only when PORT is a file port.
* tests/syscalls.scm ("terminal-columns non-file port"): New test.
2016-04-16 00:52:19 +02:00
Ludovic Courtès 29ff6d9fcc syscalls: Add TIOCGWINSZ bindings.
* guix/build/syscalls.scm (TIOCGWINSZ): New macro.
(<window-size>): New record type.
(winsize): New C struct.
(winsize-struct): New variable.
(terminal-window-size, terminal-columns): New procedures.
2016-04-15 00:32:18 +02:00
宋文武 50a3d59473 utils: Add 'edit-expression'.
* guix/utils.scm (edit-expression): New procedure.
* tests/utils.scm (edit-expression): New test.
2016-04-13 09:16:54 +08:00
Mathieu Lirzin a9edb211e7 build: Add a Guile custom test driver using SRFI-64.
Before that '.log' files for scheme tests were fragmented and not
included in test-suite.log.  This unifies the semantics of SRFI-64 API
with Automake test suite.

* build-aux/test-driver.scm: New file.
* Makefile.am (SCM_LOG_DRIVER, AM_SCM_LOG_DRIVER_FLAGS): New variables.
(SCM_LOG_COMPILER, AM_SCM_LOG_FLAGS): Delete variables.
(AM_TESTS_ENVIRONMENT): Set GUILE_AUTO_COMPILE to 0.
* test-env.in: Silence guix-daemon.
* doc/guix.texi (Running the Test Suite): Describe how to display the
detailed results.  Bug reports require only 'test-suite.log' file.
* tests/base32.scm, tests/build-utils.scm, tests/builders.scm,
tests/challenge.scm, tests/cpan.scm, tests/cpio.scm, tests/cran.scm,
tests/cve.scm, tests/derivations.scm, tests/elpa.scm,
tests/file-systems.scm, tests/gem.scm, tests/gexp.scm,
tests/gnu-maintenance.scm, tests/grafts.scm, tests/graph.scm,
tests/gremlin.scm, tests/hackage.scm, tests/hash.scm,
tests/import-utils.scm, tests/lint.scm, tests/monads.scm, tests/nar.scm,
tests/packages.scm, tests/pk-crypto.scm, tests/pki.scm,
tests/profiles.scm, tests/publish.scm, tests/pypi.scm,
tests/records.scm, tests/scripts-build.scm, tests/scripts.scm,
tests/services.scm, tests/sets.scm, tests/size.scm, tests/snix.scm,
tests/store.scm, tests/substitute.scm, tests/syscalls.scm,
tests/system.scm, tests/ui.scm, tests/union.scm, tests/upstream.scm,
tests/utils.scm: Don't exit at the end of test groups.
* tests/containers.scm: Likewise.  Use 'test-skip' instead of exiting
with error code 77.
2016-04-03 14:19:09 +02:00
David Thompson 13bc8d5e4f environment: Properly handle SIGINT.
Switching to execlp means that the process spawned in a container is PID
1, which obsoleted one of the 'guix environment --container' tests
because the init process can't be killed in the usual manner.

* guix/scripts/environment.scm (launch-environment/fork): New procedure.
(launch-environment): Switch from system* to execlp.  Add handler for
SIGINT.
(guix-environment): Use launch-environment/fork.
* tests/guix-environment-container.sh: Replace abnormal exit test with
one that works now that the spawned process is PID 1.
2016-03-27 15:09:21 -04:00
Ludovic Courtès 7adbe85e60 syscalls: 'interface-address' can return #f.
Fixes <http://bugs.gnu.org/22612>.
Reported by Danny Milosavljevic <dannym@scratchpost.org>.

* tests/syscalls.scm ("network-interfaces returns one or more
interfaces"): Accept 'interface-address' value of #f.
2016-03-25 17:29:36 +01:00
Ludovic Courtès 9a2a20052a guix build: '--with-source' correctly matches versioned file names.
* guix/scripts/build.scm: Use the right 'package-name->name+version'
procedure.  Fixes a regression introduced in
1b846da8c3.
* tests/scripts-build.scm ("options->transformation, with-source, with
version"): New test.
2016-03-23 23:43:50 +01:00
Ludovic Courtès d26e19671e derivations: Raise an error when a module file is not found.
Suggested by Jookia.

* guix/derivations.scm (&file-search-error): New error condition.
(search-path*): Raise it when 'search-path' returns #f.
* guix/gexp.scm (search-path*): Remove.
* guix/ui.scm (call-with-error-handling): Add case for
'file-search-error?'.
* tests/derivations.scm ("build-expression->derivation and invalid
module name"): New test.
2016-03-23 00:23:12 +01:00
Ludovic Courtès 3f4ecf3229 gexp: Add #:disallowed-references.
* guix/gexp.scm (gexp->derivation): Add #:disallowed-references and
honor it.
* tests/gexp.scm ("gexp->derivation #:disallowed-references, allowed")
("gexp->derivation #:disallowed-references"): New tests.
* doc/guix.texi (G-Expressions): Adjust accordingly.
2016-03-20 22:46:14 +01:00
Ludovic Courtès 35b5ca7869 derivations: Add #:disallowed-references.
* guix/derivations.scm (derivation): Add #:disallowed-references.
[user+system-env-vars]: Honor it.
(build-expression->derivation): Likewise.
* tests/derivations.scm ("derivation #:disallowed-references, ok")
("derivation #:disallowed-references, not ok"): New tests.
* doc/guix.texi (Derivations): Adjust accordingly.
2016-03-20 22:45:35 +01:00
Ludovic Courtès 522773b700 import: pypi: Emit 'pypi-uri' only when it yields the right URL.
Fixes <http://bugs.gnu.org/23062>.
Reported by Danny Milosavljevic <dannym@scratchpost.org>.

* guix/import/pypi.scm (make-pypi-sexp): Check whether 'pypi-uri'
returns SOURCE-URL and fall back to the full URL otherwise.
* tests/pypi.scm ("pypi->guix-package"): Adjust expected URI
accordingly.

Co-authored-by: Danny Milosavljevic <dannym@scratchpost.org>
2016-03-19 23:54:19 +01:00
Ludovic Courtès 71e2065a38 substitute: Honor client-provided empty URL list.
Before that, 'guix build --substitute-urls=""' would lead to using the
daemon's own URL list instead of the empty list.  The 'or*' hack, which
is to blame, had become unnecessary since commit
fb4bf72be3.

Reported by Mark H Weaver <mhw@netris.org>.

* guix/scripts/substitute.scm (or*): Remove.
(%cache-urls): Use 'or' instead of 'or*'.
* tests/store.scm ("substitute query, alternating URLs"): Add test with
empty URL list.
* doc/guix.texi (Common Build Options): Mention the empty string.
2016-03-16 18:34:53 +01:00
Ludovic Courtès f1eacbafc4 upstream: Fix 'signature-urls' coalescing.
Previously, the resulting 'signature-urls' would contain N times the
same URL.

* guix/upstream.scm (coalesce-sources): Fix TWO in 'signature-urls'.
* tests/upstream.scm: New file.
* Makefile.am (SCM_TESTS): Add it.
2016-03-09 15:08:00 +01:00
Ludovic Courtès efb107e0cd packages: Gracefully report packages not found.
Fixes a thinko introduced in 1b846da8c3
that would lead to a backtrace when looking for an unknown package.

* gnu/packages.scm (%find-package): Correct logic when checking for
FALLBACK?.
2016-03-08 11:48:21 +01:00
Ludovic Courtès 95cd4971d0 packages: Support the deprecated "NAME-VERSION" syntax.
Fixes a typo introduced in 1b846da8c3 that
would lead to a backtrace when using the deprecated syntax.

* gnu/packages.scm (%find-package): Turn the first argument to
'call-with-values' into a thunk.  Use #:select instead of '@' to select
the right 'package-name->name+version' procedure.
2016-03-08 11:38:46 +01:00
Ludovic Courtès ef8de9852e tests: Disable grafting by default for most tests.
This allows tests to run as expected even in the presence of
replacements among the bootstrap packages, such as Perl (commit
d8173f21f7).

* tests/cpan.scm: Add (%graft? #f).
* tests/derivations.scm: Likewise.
* tests/graph.scm: Likewise.
* tests/monads.scm: Likewise.
* tests/profiles.scm: Likewise.
* tests/gexp.scm: Likewise.
("gexp->derivation vs. grafts"): Explicitly reenable grafting before,
and disable it after, using 'set-grafting'.
2016-03-06 23:16:35 +01:00
Ludovic Courtès b4c42a4b07 tests: Disable tests that would rebuild the world due to grafting.
The Perl replacement added in d8173f2 leads some tests to involve
grafting, which in turn triggers derivation builds that rebuild the
world.  Work around that.

* tests/packages.scm: Add call to '%graft?'.
("package-derivation, direct graft")
("package-cross-derivation, direct graft"): Comment out.
2016-03-05 00:19:10 +01:00
Ludovic Courtès fcadd9ff9d packages: The result of 'bag-grafts' does not contain duplicates.
* guix/packages.scm (bag-grafts): Add call to 'delete-duplicates'.
2016-03-05 00:19:10 +01:00
Ludovic Courtès 6581ec9ab9 store: Add 'references/substitutes'.
* guix/store.scm (references/substitutes): New procedure.
* tests/store.scm ("references/substitutes missing reference info")
("references/substitutes with substitute info"): New tests.
2016-03-05 00:19:10 +01:00
Ludovic Courtès 94d609aba8 guix build: -S returns the replacement's source.
Reported by Mark H Weaver.

* guix/scripts/build.scm (options->derivations): When SRC and GRAFT? are
true, use the source of P's replacement.
* tests/guix-build.sh: Add test.
2016-03-03 00:18:30 +01:00
Mathieu Lirzin 1b846da8c3 utils: Use '@' for separating package names and version numbers.
This provides the ability to use numbers in package names.

Fixes <http://bugs.gnu.org/19219>.

* guix/utils.scm (package-name->name+version): New procedure.
* gnu/packages.scm (%find-package): Add a FALLBACK? keyword argument.
Use the previous method when no package is found.
(specification->package+output, specification->package): Adapt
documentation to new syntax.
* doc/guix.texi (Invoking guix package, Invoking guix import): Likewise.
* guix/ui.scm (package-specification->name+version+output): Likewise.
* guix/scripts/import/hackage.scm (show-help): Likewise.
* tests/guix-build.sh: Adapt to new syntax.
* tests/guix-lint.sh: Likewise.
* tests/guix-package.sh: Likewise.
* tests/ui.scm ("package-specification->name+version+output"): Likewise.
* tests/utils.scm ("package-name->name+version"): Likewise.
* NEWS: Mention new syntax.
2016-03-02 21:41:41 +01:00
Ludovic Courtès 442a6ff5ea tests: Disable grafts by default.
Fixes <http://bugs.gnu.org/22872>.
Reported by myglc2 <myglc2@gmail.com>.

* test-env.in: Define and export 'GUIX_BUILD_OPTIONS'.
* tests/guix-build.sh: When setting 'GUIX_BUILD_OPTIONS', make sure it
contains '--no-grafts'.
* tests/guix-package.sh: Likewise.
* tests/guix-daemon.sh: Add (%graft? #f) in Scheme snippets.
2016-03-02 14:47:07 +01:00
Ludovic Courtès c22a1324e6 grafts: Graft recursively.
Fixes <http://bugs.gnu.org/22139>.

* guix/grafts.scm (graft-derivation): Rename to...
(graft-derivation/shallow): ... this.
(graft-origin-file-name, item->deriver, non-self-references)
(cumulative-grafts, graft-derivation): New procedures
* tests/grafts.scm ("graft-derivation, grafted item is a direct
dependency"): Clarify title.  Use 'grafted' instead of 'graft' to refer
to the grafted derivation.
("graft-derivation, grafted item is an indirect dependency")
("graft-derivation, no dependencies on grafted output"): New tests.
* guix/packages.scm (input-graft): Change to take a package instead of
an input.
(input-cross-graft): Likewise.
(fold-bag-dependencies): New procedure.
(bag-grafts): Rewrite in terms of 'fold-bag-dependencies'.
* tests/packages.scm ("package-derivation, indirect grafts"): Comment out.
* doc/guix.texi (Security Updates): Mention run-time dependencies and
recursive grafting.
2016-03-01 16:00:46 +01:00
Ludovic Courtès f376dc3acb grafts: Consider all the outputs in the graft mapping.
Before that, outputs of a derivation could be left referring to the
ungrafted version of the derivation.

* guix/grafts.scm (graft-derivation)[outputs]: Change to a list of
name/file pairs.
* guix/grafts.scm (graft-derivation)[build]: Add 'old-outputs' variable
and use it when computing 'mapping'.  Use 'mapping' directly.
* tests/grafts.scm ("graft-derivation, multiple outputs"): New test.
2016-02-27 23:31:52 +01:00
Ludovic Courtès 22572d56cb store: 'path-info-deriver' is #f when there is no deriver.
* guix/store.scm (read-path-info): Use #f when we get the empty string
for DERIVER.
* guix/scripts/publish.scm (narinfo-string): Adjust accordingly.
* tests/store.scm ("path-info-deriver"): New test.
2016-02-26 23:35:29 +01:00
Ludovic Courtès 0043558082 publish: Do not publish nars for invalid store items.
Before that, /nar requests could succeed if the requested store item
exists but is invalid (although such requests were unlikely because the
corresponding narinfo request would have failed.)

* guix/scripts/publish.scm (render-nar): Add 'store' parameter.  Use
'valid-path?' instead of 'file-exists?'.
(make-request-handler): Adjust 'render-nar' call accordingly.
* tests/publish.scm ("/nar/invalid"): New test.
2016-02-25 12:44:41 +01:00
Ludovic Courtès b0fef4d660 grafts: 'name' parameter of 'graft-derivation' is now optional.
* guix/grafts.scm (graft-derivation): Name 'name' a keyword parameter.
* guix/packages.scm (package-derivation, package-cross-derivation):
Adjust accordingly.
* tests/grafts.scm ("graft-derivation"): Likewise.
* tests/packages.scm ("package-derivation, indirect grafts"): Likewise.
2016-02-22 22:11:37 +01:00
Ludovic Courtès 7adf9b8469 derivations: Move grafts to (guix grafts).
* guix/derivations.scm (<graft>, graft-derivation, %graft?)
(set-grafting): Move to...
* guix/grafts.scm: ... here.  New file.
* guix/gexp.scm, guix/packages.scm, tests/packages.scm,
guix/scripts/build.scm: Use it.
* Makefile.am (MODULES): Add it.
(SCM_TESTS): Add tests/grafts.scm.
* tests/derivations.scm ("graft-derivation"): Move to...
* tests/grafts.scm: ... here.  New file.
2016-02-22 22:11:37 +01:00
David Thompson 779aa003fb scripts: environment: Build environments as profiles.
Fixes <http://bugs.gnu.org/19816>.

* guix/scripts/environment.scm (evaluate-input-search-paths)
(build-inputs): Delete.
(evaluate-profile-search-paths, strip-input-name)
(package-or-package+output?, package-environment-inputs)
(build-environment, inputs->profile-derivations): New procedures.
(create-environment, show-search-paths, launch-environment)
(launch-environment/container): Replace 'inputs' argument
with 'profile' argument.
(package+propagated-inputs): Strip off names off of input tuples.
(options/resolve-packages): Handle input tuples that specify an output
in expressions.
(guix-environment): Convert inputs into a profile to use in the
environment.  Remove non-package inputs such as origins from
environment inputs.
* doc/guix.texi ("invoking guix environment"): Document package+output
tuples for --expression option.
* tests/guix-environment.sh: Update tests.
* tests/guix-environment-container.sh: Likewise.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-02-12 22:02:06 +01:00
Ludovic Courtès 98a7b528d6 store: Add monadic access to '%current-system'.
* guix/store.scm (current-system, set-current-system): New procedures.
* tests/store.scm ("current-system"): New test.
2016-02-12 21:54:25 +01:00
Ludovic Courtès 47c0f92c37 guix build: Add '--with-input'.
* guix/scripts/build.scm (transform-package-inputs): New procedure.
(%transformations): Add it.
(%transformation-options, show-transformation-options-help): Add
--with-input.
* tests/scripts-build.scm ("options->transformation, with-input"):
("options->transformation, with-input, no matches"): New tests.
* tests/guix-build.sh: Add tests.
* doc/guix.texi (Package Transformation Options): Document it.
2016-02-01 08:59:13 +01:00
Ludovic Courtès 629a064f32 guix build: Transformations operate on single objects.
* guix/scripts/build.scm (transform-package-source): Return a procedure
that expects a single object rather than a list of packages.
(options->transformation): Rewrite to precompute the list of applicable
transformations and to return a procedure that expects a single object
rather than a list of objects.
(options->derivations): Adjust accordingly.
* tests/scripts-build.scm: New file.
* Makefile.am (SCM_TESTS): Add it.
2016-02-01 08:59:13 +01:00
Alex Kost d4053c710b services: Rename 'dmd' services to 'shepherd'.
* gnu/services/shepherd.scm (dmd-root-service-type, %dmd-root-service)
  (dmd-service-type, <dmd-service>, dmd-service, dmd-service?)
  (make-dmd-service, dmd-service-documentation, dmd-service-provision)
  (dmd-service-requirement, dmd-service-respawn, dmd-service-start)
  (dmd-service-stop, dmd-service-auto-start?, dmd-service-modules)
  (dmd-service-imported-modules, dmd-service-file-name, dmd-service-file)
  (dmd-service-back-edges): Rename to...
  (shepherd-root-service-type, %shepherd-root-service, shepherd-service-type)
  (<shepherd-service>, shepherd-service, shepherd-service?)
  (make-shepherd-service, shepherd-service-documentation)
  (shepherd-service-provision, shepherd-service-requirement)
  (shepherd-service-respawn, shepherd-service-start)
  (shepherd-service-stop, shepherd-service-auto-start?)
  (shepherd-service-modules, shepherd-service-imported-modules)
  (shepherd-service-file-name, shepherd-service-file)
  (shepherd-service-back-edges): ...this
* gnu/services.scm: Adjust comments.
* gnu/services/avahi.scm (avahi-dmd-service): Rename to...
  (avahi-shepherd-service): ... this.
* gnu/services/base.scm (%root-file-system-dmd-service)
  (file-system->dmd-service-name, mapped-device->dmd-service-name)
  (dependency->dmd-service-name, file-system-dmd-service)
  (mingetty-dmd-service, nscd-dmd-service, guix-dmd-service)
  (guix-publish-dmd-service, udev-dmd-service, gpm-dmd-service): Rename to...
  (%root-file-system-shepherd-service)
  (file-system->shepherd-service-name, mapped-device->shepherd-service-name)
  (dependency->shepherd-service-name, file-system-shepherd-service)
  (mingetty-shepherd-service, nscd-shepherd-service, guix-shepherd-service)
  (guix-publish-shepherd-service, udev-shepherd-service)
  (gpm-shepherd-service): ... this.
* gnu/services/databases.scm (postgresql-dmd-service): Rename to...
  (postgresql-shepherd-service): ... this.
* gnu/services/desktop.scm (upower-dmd-service, elogind-dmd-service):
  Rename to...
  (upower-shepherd-service, elogind-shepherd-service): ... this.
* gnu/services/dbus.scm (dbus-dmd-service): Rename to...
  (dbus-shepherd-service): ... this.
* gnu/services/lirc.scm (lirc-dmd-service): Rename to...
  (lirc-shepherd-service): ... this.
* gnu/services/mail.scm (dovecot-dmd-service): Rename to...
  (dovecot-shepherd-service): ... this.
* gnu/services/networking.scm (ntp-dmd-service, tor-dmd-service)
  (bitlbee-dmd-service, wicd-dmd-service, network-manager-dmd-service): Rename to...
  (dbus-shepherd-service): ... this.
* gnu/services/ssh.scm (lsh-dmd-service): Rename to...
  (lsh-shepherd-service): ... this.
* gnu/services/web.scm (nginx-dmd-service): Rename to...
  (nginx-shepherd-service): ... this.
* gnu/services/xorg.scm (slim-dmd-service): Rename to...
  (slim-shepherd-service): ... this.
* gnu/system.scm (essential-services): Use '%shepherd-root-service'.
* gnu/system/install.scm (cow-store-service-type): Adjust accordingly.
* guix/scripts/system.scm (dmd-service-node-label, dmd-service-node-type)
  (export-dmd-graph): Likewise.
* tests/guix-system.sh: Likewise.
* tests/services.scm ("dmd-service-back-edges"): Rename to...
  ("shepherd-service-back-edges"): Adjust accordingly.
* doc/guix.texi: Likewise.
* doc/images/service-graph.dot: Use 'shepherd' service name.
2016-01-29 20:21:53 +03:00
Alex Kost 0190c1c02f Rename (gnu services dmd) to (gnu services shepherd).
* gnu/services/dmd.scm: Rename to...
* gnu/services/shepherd.scm: ... this.
* gnu/system.scm: Use it.
* gnu/system/install.scm: Likewise.
* gnu/services/xorg.scm: Likewise.
* gnu/services/web.scm: Likewise.
* gnu/services/ssh.scm: Likewise.
* gnu/services/networking.scm: Likewise.
* gnu/services/mail.scm: Likewise.
* gnu/services/lirc.scm: Likewise.
* gnu/services/desktop.scm: Likewise.
* gnu/services/dbus.scm: Likewise.
* gnu/services/databases.scm: Likewise.
* gnu/services/base.scm: Likewise.
* gnu/services/avahi.scm: Likewise.
* guix/scripts/system.scm: Likewise.
* tests/services.scm: Likewise.
* tests/guix-system.sh: Likewise.
* doc/guix.texi (Shepherd Services): Adjust accordingly.
* gnu-system.am (GNU_SYSTEM_MODULES): Likewise.
* po/guix/POTFILES.in: Likewise.
2016-01-29 20:21:53 +03:00
Mathieu Lirzin 74e667d149 packages: Use '@' in package record printers.
* guix/packages.scm <package>: Use '@' in record printer.
* guix/import/cabal.scm <cabal-package>: Likewise
* guix/import/elpa.scm <elpa-package>: Likewise.
* tests/packages.scm: Adapt to it.
2016-01-28 16:31:38 +01:00
Mathieu Lirzin 052d53df1f tests: Use 'dummy-origin' for lint tests when possible.
* guix/tests/lint.scm ("patches: file names", "patches: not found"): Use
'dummy-origin'.  'sha256' field was wrongly set to a string instead of a
bytevector.
2016-01-28 16:31:38 +01:00
Mark H Weaver 412bee5e29 Merge branch 'master' into core-updates 2016-01-24 21:04:54 -05:00
Ludovic Courtès c74f0cb2b8 tests: Prevent 'http_proxy' from breaking Web server tests.
* tests/lint.scm: Add call to 'unsetenv' to remove 'http_proxy'.
* tests/publish.scm: Likewise.
2016-01-22 00:02:52 +01:00
Ludovic Courtès 6b779207ee system: grub: Search root device by label or UUID if possible.
Fixes <http://bugs.gnu.org/22281>.
Reported by Christopher Allan Webber <cwebber@dustycloud.org>.

* gnu/system/grub.scm (eye-candy): Add 'root-fs' parameter.  Replace
'search --file' command in the output with whatever 'grub-root-search'
returns.
(grub-root-search): New procedure.
(grub-configuration-file): Add 'store-fs' parameter.  Use
'grub-root-search' instead of hard-coded 'search --file' commands.
* gnu/system.scm (store-file-system,
operating-system-store-file-system): New procedures.
(operating-system-grub.cfg): Use it, and adjust call to
'grub-configuration-file'.
* tests/system.scm: New file.
* Makefile.am (SCM_TESTS): Add it.
2016-01-22 00:02:52 +01:00
Ben Woodcroft a132f7d68f tests: Move beatify-description tests to import-tests.
Fixes <http://bugs.gnu.org/22391>.

* tests/cran.scm (beautify-description: use double spacing,
beautify-description: transform fragment into sentence). Move
from here ...
* tests/import-utils.scm: ... to here. New file.
* Makefile.am (SCM_TESTS): Add import-utils.
2016-01-20 22:06:25 +10:00
Ben Woodcroft e88d5fa9eb import: gem: Beautify only the description, not the synopsis.
* guix/import/gem.scm (make-gem-sexp): Add synopsis argument.
(gem->guix-package): Pass unbeautified synopsis to make-gem-sexp.
* tests/gem.scm: Adapt it.
2016-01-20 21:52:52 +10:00
Ricardo Wurmus d0bd632f89 import: Add Bioconductor importer and updater.
* guix/import/cran.scm (%bioconductor-updater,
latest-bioconductor-release, bioconductor-package?): New procedures.
(cran->guix-package): Support repositories other than CRAN.
(%bioconductor-url, %bioconductor-svn-url): New variables.
(description->package): Update signature to distinguish between packages
from different repositories.
(latest-release): Rename procedure ...
(latest-cran-release): ... to this.
(cran-package?): Do not assume all R packages are available on CRAN.
* tests/cran.scm: Update tests.
* guix/scripts/import/cran.scm: Add "--archive" option and default to
CRAN.
* guix/scripts/refresh.scm (%updaters): Add "%bioconductor-updater".
* doc/guix.texi: Document Bioconductor importer and updater.
2016-01-20 12:41:28 +01:00
Ludovic Courtès 0e510971c3 derivations: Add test in keep-going mode.
* tests/derivations.scm ("derivation fails but keep going"): New test.
2016-01-19 21:59:58 +01:00
Mark H Weaver afe9f40949 Merge branch 'master' into core-updates 2016-01-19 00:18:37 -05:00
Ludovic Courtès 44ad33843a derivations: Add test for #:leaked-env-vars.
* tests/derivations.scm ("derivation #:leaked-env-vars"): New test.
2016-01-18 17:41:16 +01:00
Ludovic Courtès 724eaef1b2 tests: Use sed instead of grep as a package with no dependencies.
* tests/graph.scm ("node-edges"): Choose SED instead of GREP as the
example.
2016-01-13 18:19:01 +01:00
Ludovic Courtès 6071122b71 utils: Add 'ensure-keyword-arguments'.
* guix/utils.scm (delkw, ensure-keyword-arguments): New procedures.
* tests/utils.scm ("ensure-keyword-arguments"): New test.
2016-01-06 23:08:22 +01:00
Ludovic Courtès db5a94445f guix package: Allow multiple '--search' flags.
* guix/scripts/package.scm (find-packages-by-description): Change 'rx'
parameter to 'regexps'.
[matches-all?, matches-one?]: New procedures.
Use them.
(process-query): Collect regexps from all 'search' queries, and pass
them to 'find-packages-by-description'.
* tests/guix-package.sh: Add tests.
* doc/guix.texi (Invoking guix package): Document it.
2016-01-05 00:28:42 +01:00
Ludovic Courtès 51385362f7 graph: %BAG-WITH-ORIGINS-NODE-TYPE includes the origin's guile.
Before that it would include #f for most origins since that the default
value of 'origin-patch-guile'.

* guix/scripts/graph.scm (bag-node-edges): When 'origin-patch-guile'
returns #f, use (default-guile).
* tests/graph.scm ("bag DAG, including origins"): Check for an edge from
O to (default-guile).
2016-01-02 22:25:41 +01:00
Ludovic Courtès f88282af38 graph: %BAG-EMERGED-NODE-TYPE filters out origins.
Fixes <http://bugs.gnu.org/22280>.
Reported by Leo Famulari <leo@famulari.name>.

* guix/scripts/graph.scm (%bag-emerged-node-type)[edges]: Mimic
%BAG-NODE-TYPE.  This is a followup to 38b92da.
2016-01-02 22:25:41 +01:00