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1325 Commits (e9e08b02b5eb7eaaf2af2f381505c720fefec54c)

Author SHA1 Message Date
Vinicius Monego 35a00cf3dc
gnu: Add pagmo.
* gnu/packages/maths.scm (pagmo): New variable.
2023-09-30 10:37:47 -03:00
Vinicius Monego 39eb0d8a94
gnu: Add bonmin.
* gnu/packages/maths.scm (bonmin): New variable.
2023-09-30 10:37:47 -03:00
Vinicius Monego 5cb1766ad8
gnu: Add cminpack.
* gnu/packages/maths.scm (cminpack): New variable.
2023-09-30 10:37:47 -03:00
Vinicius Monego eb871ffd76
gnu: Add primesieve.
* gnu/packages/maths.scm (primesieve): New variable.
2023-09-30 10:37:47 -03:00
Vinicius Monego 7a53bd61a0
gnu: Add hmat.
* gnu/packages/maths.scm (hmat): New variable.
2023-09-30 10:37:43 -03:00
David Elsing d78bbb912c
gnu: hdf-eos5: Update to 2.0.
* gnu/packages/maths.scm (hdf-eos5): Update to 2.0.
[source]: Change URL and add snippet to remove generated files.
[native-inputs]: Add autoconf, automake and libtool.
[inputs]: Replace hdf5-1.8 with hdf5-1.14.
[arguments]: Do not use quasiquote and add the phases
remove-single-module-flag and fix-parallel-tests.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-09-30 10:29:59 +01:00
Efraim Flashner a473d562ff
gnu: openblas-ilp64: Add symbol suffix.
* gnu/packages/maths.scm (openblas-ilp64)[arguments]<#:make-flags>: Add the
symbol '64_' as suffix.
2023-09-28 13:48:31 +03:00
Guillaume Le Vaillant 4f35ff1275
Merge branch 'lisp-team' 2023-09-23 10:29:31 +02:00
Guillaume Le Vaillant 17c13b4a42
gnu: maxima: Update to 5.47.0.
* gnu/packages/maths.scm (maxima): Update to 5.47.0.
  [inputs]: Remove labels.
  [arguments]: Use gexps. Remove trailing booleans.
2023-09-04 13:49:22 +02:00
Andreas Enge b51e45d3aa
gnu: matio: Update to 1.5.23.
* gnu/packages/maths.scm (matio): Update to 1.5.23.
2023-08-31 12:53:36 +02:00
Andreas Enge e5ce59e212
gnu: matio: Use standard hd5 as input.
* gnu/packages/maths.scm (matio)[inputs]: Replace hdf5-1.8 by hdf5,
  which is version 1.10.
2023-08-31 12:53:36 +02:00
Andy Tai 67268d9a81
gnu: octave-cli: Update to 8.3.0
* gnu/packages/maths.scm (octave-cli): Update to 8.3.0

Signed-off-by: Eric Bavier <bavier@posteo.net>
2023-09-13 09:22:28 -05:00
Andreas Enge 6a01c1142b
gnu: hdf4, hdf4-alt: Update to 4.2.16-2.
* gnu/packages/maths.scm (hdf4)[source]: Update to 4.2.16-2. Drop patches
that do not apply any more.
[arguments]: Drop configure flag related to libtirpc. Add configure flag
to build xdr library and drop unneeded substitutions.
* gnu/packages/patches/hdf4-architectures.patch,
gnu/packages/patches/hdf4-tirpc.patch: Remove files.
* gnu/local.mk (dist_patch_DATA): Unregister patches.
2023-09-13 11:18:42 +02:00
Andy Tai 2d366e309b
gnu: Add ruy.
* gnu/packages/maths.scm (ruy): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2023-09-08 10:53:37 +02:00
Andreas Enge b08178a053
gnu: hdf5: Remove 1.12.2.
* gnu/packages/maths.scm (hdf5-1.12): Remove variable.
2023-08-21 22:35:34 +02:00
Andreas Enge c82b83a859
gnu: scilab: Update to 5.5.2.
* gnu/packages/maths.scm (scilab): Update to 5.5.2.
2023-08-18 20:12:22 +02:00
Nicolas Graves 48648031a5
gnu: scilab: Fix compilation error.
Signed-off-by: Andreas Enge <andreas@enge.fr>
2023-08-18 18:11:36 +02:00
Ludovic Courtès dcf05f2321
gnu: libflame: Update to 70c19e7.
* gnu/packages/maths.scm (libflame): Update to 70c19e7.
[arguments]: Add #:make-flags.
2023-08-17 17:33:53 +02:00
Janneke Nieuwenhuizen 11c9743350
gnu: mcrl2: Update to 202206.1.
* gnu/packages/maths.scm (mcrl2): Update to 202206.1.
[source]: Remove patches.
* gnu/packages/patches/mcrl2-fix-1687.patch,
gnu/packages/patches/mcrl2-fix-counterexample.patch: Remove files.
* gnu/local.mk (dist_patch_DATA): Remove their references.
2023-08-17 08:08:59 +02:00
Ludovic Courtès 2a4047e540
gnu: libflame: Remove input labels and use gexps.
* gnu/packages/maths.scm (libflame)[arguments]: Use gexps and remove
trailing #t in phases.
[inputs, native-inputs]: Remove labels.
2023-08-11 00:50:47 +02:00
Ludovic Courtès 229faac39b
gnu: libflame: Remove dependency on OpenBLAS.
This dependency was build-time-only and unused at compile time (the test
suite is unaffected).

* gnu/packages/maths.scm (libflame)[native-inputs]: Remove OPENBLAS.
2023-08-11 00:50:47 +02:00
Ludovic Courtès aae69b7163
gnu: libflame: Tweak synopsis.
* gnu/packages/maths.scm (libflame)[synopsis]: Expand acronym.
2023-08-08 18:01:55 +02:00
Ludovic Courtès 508458de03
gnu: blis: Provide the CBLAS interface.
* gnu/packages/maths.scm (blis)[arguments]: Add #:configure-flags.
2023-08-08 18:01:54 +02:00
Andreas Enge c47f5587a2
gnu: maths: Remove a duplicate module import.
Reported-by: Andy Tai <atai@atai.org>

* gnu/packages/maths.scm: Remove duplicate line.
2023-08-07 17:26:40 +02:00
Tobias Geerinckx-Rice ae3a58cf84
gnu: libpoly: Update to 0.1.12.
* gnu/packages/maths.scm (libpoly): Update to 0.1.12.
2023-07-30 02:00:00 +02:00
Tobias Geerinckx-Rice a27d172ee6
gnu: calc: Update to 2.14.2.1.
* gnu/packages/maths.scm (calc): Update to 2.14.2.1.
2023-07-23 02:00:00 +02:00
Distopico 67cc7b1635
gnu: Add calc.
* gnu/packages/maths.scm (calc): New variable.

Co-authored-by: Andreas Enge <andreas@enge.fr>
2023-07-26 16:31:36 +02:00
Tobias Geerinckx-Rice 24d4e8182d
gnu: vc: Use G-expressions.
* gnu/packages/maths.scm (vc)[arguments]:
Rewrite as G-expressions.
2023-07-16 02:00:01 +02:00
Tobias Geerinckx-Rice d6cb55b395
gnu: vc: Update to 1.4.3.
* gnu/packages/maths.scm (vc): Update to 1.4.3.
[arguments]: Don't explicitly return #t from phases.
2023-07-16 02:00:01 +02:00
Tobias Geerinckx-Rice 7abf96a2ec
gnu: frama-c: Build verbosely.
As verbosely as most other packages, that is.

* gnu/packages/maths.scm (frama-c)[arguments]: Add "--enable-verbosemake"
to #:configure-flags.
2023-07-16 02:00:08 +02:00
Nicolas Goaziou 29cc6b1cd6
gnu: Deprecate `texlive-tiny'.
At this point, there are three equivalent TeX Live sub-systems:
texlive-scheme-basic, texlive-tiny, and (texlive-updmap.cfg).  It is confusing
to keep so many around.

* doc/contributing.texi (Submitting Patches): Remove reference to
TEXLIVE-TINY.
* gnu/packages/algebra.scm (pari-gp)[native-inputs]:
(giac)[native-inputs]:
* gnu/packages/chez.scm (chez-sockets)[native-inputs]:
* gnu/packages/engineering.scm (fastcap)[native-inputs]:
* gnu/packages/gettext.scm (po4a)[native-inputs]:
* gnu/packages/maths.scm (cddlib)[native-inputs]:
(gnuplot)[native-inputs]:
(itpp)[native-inputs]:
* gnu/packages/ocaml.scm (unison)[native-inputs]:
* gnu/packages/pdf.scm (extractpdfmark)[native-inputs]:
* gnu/packages/photo.scm (enblend-enfuse): Replace TEXLIVE-TINY with a call to TEXLIVE-UPDMAP.CFG.
* gnu/packages/radio.scm (gnuradio)[native-inputs]: Remove unnecessary
TEXLIVE-TINY.
* gnu/packages/tex.scm (texlive-tiny): Deprecate it in favor of TEXLIVE-SCHEME-BASIC.
(texlive-makecmds)[native-inputs]:  Replace TEXLIVE-TINY with a call to TEXLIVE-UPDMAP.CFG.
* guix/lint.scm (check-inputs-should-be-native): Check only for
"texlive-updmap.cfg" input name.
2023-07-18 18:16:49 +02:00
Nicolas Goaziou 7a18bd9e74
gnu: Rationalize texlive-updmap.cfg and texlive-tiny inputs.
TEXLIVE-UPDMAP.CFG and TEXLIVE-TINY should only be used as native inputs.
Also remove texlive packages already provided by them.

* doc/build.scm (pdf-manual):
* gnu/packages/algebra.scm (pari-gp):
* gnu/packages/bioinformatics.scm (discrover):
(phyml):
(velvet):
* gnu/packages/chemistry.scm (yaehmop):
* gnu/packages/chez.scm (stex-bootstrap):
(chez-web):
(chez-sockets):
* gnu/packages/cran.scm (r-prereg):
* gnu/packages/docbook.scm (dblatex):
* gnu/packages/emacs-xyz.scm (emacs-auctex):
* gnu/packages/engineering.scm (fastcap):
* gnu/packages/fsf.scm (book-faif):
* gnu/packages/graphviz.scm (dot2tex):
* gnu/packages/maths.scm (hypre):
* gnu/packages/ocaml.scm (unison):
(ocaml-bibtex2html):
* gnu/packages/plotutils.scm (asymptote):
* gnu/packages/python-xyz.scm (python-nbconvert):
(python-pypandoc):
* gnu/packages/radio.scm (gnuradio):
(libosmo-dsp):
* gnu/packages/statistics.scm (r-with-tests):
* gnu/packages/tex.scm (texlive-makecmds):
(texlive-innerscript):
(teximpatient):
(texlive-xkeyval): Remove texlive packages already provided by
TEXLIVE-UPDMAP.CFG.  Don't add TEXLIVE-TINY or TEXLIVE-UPDMAP.CFG as inputs.
2023-07-18 18:16:47 +02:00
Nicolas Goaziou e8f3b8bdc7
gnu: hypre: Fix error when building documentation.
* gnu/packages/maths.scm (hypre)[native-inputs]: Add TEXLIVE-LATEXMK.
2023-07-18 18:16:42 +02:00
Nicolas Goaziou eab3b80369
gnu: texlive-jknappen: Deprecate package.
* gnu/packages/tex.scm (texlive-jknappen): Deprecate variable.
(texlive-paralist):
(texlive-jadetex):
(texlive-xindy):
* gnu/packages/maths.scm (hypre):
* gnu/packages/python-xyz.scm (python-nbconvert): Use TEXLIVE-JKNAPLTX instead.
2023-07-18 18:11:41 +02:00
Nicolas Goaziou 50e49cf9b4
gnu: texlive-latex-needspace -> texlive-needspace.
* gnu/packages/tex.scm (texlive-needspace): New variable.
(texlive-latex-needspace): Deprecate variable.
* gnu/packages/maths.scm (hypre)[native-inputs]:
* gnu/packages/sphinx.scm (python-sphinx)[propagated-inputs]: Use new name.
2023-07-18 18:11:00 +02:00
Nicolas Goaziou 3c3bb270da
gnu: texlive-latex-varwidth -> texlive-varwidth.
* gnu/packages/tex.scm (texlive-varwidth): New variable.
(texlive-latex-varwidth): Deprecate variable.
(texlive-adjustbox): Use new name.
* gnu/packages/maths.scm (hypre)[native-inputs]: Use new name. Re-order
alphabetically.
* gnu/packages/sphinx.scm (python-sphinx)[propagated-inputs]: Use new
name. Re-order alphabetically.
2023-07-18 18:10:59 +02:00
Nicolas Goaziou c81b4d6002
gnu: texlive-latex-tabulary -> texlive-tabulary.
* gnu/packages/tex.scm (texlive-tabulary): New variable.
(texlive-latex-tabulary): Deprecate variable.
* gnu/packages/maths.scm (hypre):
* gnu/packages/sphinx.scm (python-sphinx): Use new name.
2023-07-18 18:10:55 +02:00
Nicolas Goaziou daf6f34c1e
gnu: texlive-latex-parskip -> texlive-parskip.
* gnu/packages/tex.scm (texlive-parskip): New variable.
(texlive-latex-parskip): Deprecate variable.
* gnu/packages/maths.scm (hypre):
* gnu/packages/plotutils.scm (asymptote):
* gnu/packages/python-xyz.scm (python-nbconvert):
* gnu/packages/sphinx.scm (python-sphinx): Use new name.
2023-07-18 18:10:54 +02:00
Nicolas Goaziou f0a491f717
gnu: texlive-latex-multirow -> texlive-multirow.
* gnu/packages/tex.scm (texlive-multirow): New variable.
(texlive-latex-multirow): Deprecate variable.
(texlive-metalogo):
* gnu/packages/docbook.scm (dblatex):
* gnu/packages/maths.scm (hypre): Use new name.
2023-07-18 18:10:53 +02:00
Nicolas Goaziou bd12824e56
gnu: texlive-latex-float -> texlive-float.
* gnu/packages/tex.scm (texlive-float): New variable.
(texlive-latex-float): Deprecate variable.
(texlive-showexpl):
(texlive-minted):
(texlive-apa6):
* gnu/packages/docbook.scm (dblatex):
* gnu/packages/maths.scm (hypre):
* gnu/packages/python-xyz.scm (python-nbconvert):
* gnu/packages/sphinx.scm (python-sphinx): Use new name.
2023-07-18 18:10:51 +02:00
Nicolas Goaziou 51a55ec735
gnu: texlive-latex-colortbl -> texlive-colortbl.
* gnu/packages/tex.scm (texlive-colortbl): New variable.
(texlive-latex-colortbl): Deprecate variable.
(texlive-jadetex):
* gnu/packages/docbook.scm (dblatex):
* gnu/packages/maths.scm (hypre): Use new name.
2023-07-18 18:10:50 +02:00
Nicolas Goaziou e5e13d03f0
gnu: texlive-latex-cmap -> texlive-cmap.
* gnu/packages/tex.scm (texlive-cmap): New variable.
(texlive-latex-cmap): Deprecate variable.
* gnu/packages/maths.scm (hypre):
* gnu/packages/sphinx.scm (python-sphinx): Use new name.
2023-07-18 18:10:49 +02:00
Nicolas Goaziou 9550a20361
gnu: texlive-latex-upquote -> texlive-upquote.
* gnu/packages/tex.scm (texlive-upquote): New variable.
(texlive-latex-upquote): Deprecate variable.
* gnu/packages/cran.scm (r-prereg):
* gnu/packages/maths.scm (hypre):
* gnu/packages/python-xyz.scm (python-nbconvert):
* gnu/packages/sphinx.scm (python-sphinx):
* gnu/packages/statistics.scm (r-with-tests): Use new name.
2023-07-18 18:10:46 +02:00
Nicolas Goaziou 9e4adea8ad
gnu: texlive-latex-geometry -> texlive-geometry.
* gnu/packages/tex.scm (texlive-geometry): New variable.
(texlive-latex-geometry): Deprecate variable.
(texlive-xindy):
* gnu/packages/chemistry.scm (yaehmop):
* gnu/packages/cran.scm (r-prereg):
* gnu/packages/graphviz.scm (dot2tex):
* gnu/packages/maths.scm (hypre):
* gnu/packages/plotutils.scm (asymptote):
* gnu/packages/python-xyz.scm (python-nbconvert):
* gnu/packages/sphinx.scm (python-sphinx): Use new name.
2023-07-18 18:10:44 +02:00
Nicolas Goaziou 49928a5dc2
gnu: texlive-latex-framed -> texlive-framed.
* gnu/packages/tex.scm (texlive-framed): New variable.
(texlive-latex-framed): Deprecate variable.
(texlive-minted):
* gnu/packages/maths.scm (hypre):
* gnu/packages/sphinx.scm (python-sphinx): Use new name.
2023-07-18 18:10:42 +02:00
Nicolas Goaziou ec56993c84
gnu: texlive-latex-fncychap -> texlive-fncychap.
* gnu/packages/tex.scm (texlive-fncychap): New variable.
(texlive-latex-fncychap): Deprecate variable.
* gnu/packages/maths.scm (hypre):
* gnu/packages/sphinx.scm (python-sphinx): Use new name.
2023-07-18 18:10:41 +02:00
Nicolas Goaziou c0b3254568
gnu: texlive-latex-tocloft -> texlive-tocloft.
* gnu/packages/tex.scm (texlive-tocloft): New variable.
(texlive-latex-tocloft): Deprecate variable.
* gnu/packages/maths.scm (hypre): Use new name.
2023-07-18 18:10:41 +02:00
Nicolas Goaziou c9347f438b
gnu: texlive-latex-stackengine -> texlive-stackengine.
* gnu/packages/tex.scm (texlive-stackengine): New variable.
(texlive-latex-stackengine): Deprecate variable.
* gnu/packages/maths.scm (hypre): Use new name.
2023-07-18 18:10:40 +02:00
Nicolas Goaziou 40b0c09d27
gnu: texlive-generic-listofitems -> texlive-listofitems.
* gnu/packages/tex.scm (texlive-listofitems): New variable.
(texlive-generic-listofitems): Deprecate variable.
(texlive-latex-readarray):
* gnu/packages/maths.scm (hypre): Use new name.
2023-07-18 18:10:40 +02:00
Nicolas Goaziou e1e0e08451
gnu: texlive-latex-newunicodechar -> texlive-newunicodechar.
* gnu/packages/tex.scm (texlive-newunicodechar): New variable.
(texlive-latex-newunicodechar): Deprecate variable.
* gnu/packages/maths.scm (hypre): Use new name.
2023-07-18 18:10:39 +02:00
Nicolas Goaziou b42e997e85
gnu: texlive-latex-natbib -> texlive-natbib.
* gnu/packages/tex.scm (texlive-natbib): New variable.
(texlive-latex-natbib): Deprecate variable.
(texlive-apacite):
* gnu/packages/bioinformatics.scm (discrover):
* gnu/packages/maths.scm (hypre): Use new name.
2023-07-18 18:10:38 +02:00
Nicolas Goaziou 4270d94ee3
gnu: texlive-latex-hanging -> texlive-hanging.
* gnu/packages/tex.scm (texlive-hanging): New variable.
(texlive-latex-hanging): Deprecate variable.
* gnu/packages/maths.scm (hypre): Use new name.
2023-07-18 18:10:37 +02:00
Nicolas Goaziou 3522e1970a
gnu: texlive-dvips-l3backend -> texlive-l3backend.
* gnu/packages/tex.scm (texlive-dvips-l3backend): Deprecate package.
* gnu/packages/chez.scm (stex-bootstrap):
* gnu/packages/maths.scm (cddlib):
* gnu/packages/ocaml.scm (unison):
* gnu/packages/plotutils.scm (asymptote): Use new name.
2023-07-18 18:10:36 +02:00
Nicolas Goaziou a9634e2f23
gnu: texlive-latex-backend -> texlive-backend.
* gnu/packages/tex.scm (texlive-l3backend): New variable.
(texlive-latex-l3backend): Deprecate package.
(texlive-latex-base):
(texlive-xetex):
* gnu/packages/maths.scm (cddlib): Apply renaming.
2023-07-18 18:10:36 +02:00
Nicolas Goaziou 376059576e
gnu: texlive-latex-etoc -> texlive-etoc.
* gnu/packages/tex.scm (texlive-etoc): New variable.
(texlive-latex-etoc): Deprecate variable.
* gnu/packages/maths.scm (hypre): Apply renaming.
2023-07-18 18:10:28 +02:00
Vivien Kraus 1cd3eb66b1
gnu: frama-c: depend on zlib
* gnu/packages/maths.scm (frama-c) [inputs]: Add zlib.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2023-07-17 21:30:08 +02:00
Tobias Geerinckx-Rice 69c3a06a1c
gnu: btor2tools: Use HTTPS home page.
* gnu/packages/maths.scm (btor2tools)[home-page]: Use HTTPS.
2023-07-09 02:00:09 +02:00
Tobias Geerinckx-Rice 86e95b2205
gnu: boolector: Use HTTPS home page.
* gnu/packages/maths.scm (boolector)[home-page]: Use HTTPS.
2023-07-09 02:00:01 +02:00
Tobias Geerinckx-Rice 2be1a6795f
gnu: 4ti2: Update home page.
* gnu/packages/maths.scm (4ti2)[home-page]: Update.
2023-07-09 02:00:11 +02:00
Tobias Geerinckx-Rice 0f766e8439
gnu: armadillo: Update to 12.4.1.
* gnu/packages/maths.scm (armadillo): Update to 12.4.1.
2023-07-09 02:00:10 +02:00
Tobias Geerinckx-Rice d3fa3e7313
gnu: aiger: Use HTTPS source & home page.
* gnu/packages/maths.scm (aiger)[source, home-page]: Use HTTPS.
2023-07-09 02:00:01 +02:00
Ludovic Courtès ff208b4b62
gnu: arpack-ng: Update to 3.9.0.
* gnu/packages/maths.scm (arpack-ng): Update to 3.9.0.
[source]: Add 'patches'.
[build-system]: Switch to CMAKE-BUILD-SYSTEM.
[native-inputs]: Remove AUTOCONF, AUTOMAKE, and LIBTOOL.
(arpack-ng-openmpi)[inputs]: Use 'modify-inputs'.
[arguments]: Use gexps.
* gnu/packages/patches/arpack-ng-propagate-rng-state.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2023-07-13 17:59:57 +02:00
Paul A. Patience 7858b74b77
gnu: gnuplot: Update to 5.4.8.
* gnu/packages/maths.scm (gnuplot): Update to 5.4.8.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-07-11 16:58:04 +02:00
Paul A. Patience 7761495ccb
gnu: gmsh: Update to 4.11.1.
* gnu/packages/maths.scm (gmsh): Update to 4.11.1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-07-11 16:15:01 +02:00
Tobias Geerinckx-Rice f5f9db1514
gnu: bitwise: Update to 0.43.
* gnu/packages/maths.scm (bitwise): Update to 0.43.
2023-07-02 02:01:23 +02:00
Paul A. Patience d08cb9bf44
gnu: nomad-optimizer: Fix build.
* gnu/packages/maths.scm (nomad-optimizer)
[arguments]<#:phases>: Remove 'delete-superfluous-egg-info' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-06-25 23:46:03 +02:00
Ludovic Courtès dd587a4fef
gnu: lapack: Build CBLAS.
This adds libcblas.so, which users typically expect to have.

* gnu/packages/maths.scm (lapack)[arguments]: Pass "-DCBLAS=ON".
2023-06-09 14:50:43 +02:00
Andy Tai 5a761ff6ae
gnu: octave-cli: Update to 8.2.0
* gnu/packages/maths.scm (octave-cli): Update to 8.2.0

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-06-08 23:37:10 +02:00
Ricardo Wurmus c3f7823670
gnu: Add python-blis-for-thinc.
* gnu/packages/maths.scm (python-blis-for-thinc): New variable.
2023-06-08 10:37:08 +02:00
Ricardo Wurmus 069618522d
gnu: Add python-blis.
* gnu/packages/maths.scm (python-blis): New variable.
2023-06-08 10:37:08 +02:00
Ricardo Wurmus 28d5ec153c
gnu: blis: Update to 0.9.0.
* gnu/packages/maths.scm (blis): Update to 0.9.0.
[arguments]: Use G-expression; remove trailing #T from build phases.
2023-06-08 10:37:08 +02:00
Efraim Flashner a6e21911bf
gnu: hdf4: Add support for riscv64-linux.
* gnu/packages/maths.scm (hdf4)[arguments]: Rename custom phase
'add-more-aarch64-support to 'add-more-architecture-support and add
support for riscv64-linux.
* gnu/packages/patches/hdf4-architectures.patch: Refresh from upstream.
2023-06-07 09:30:52 +03:00
Efraim Flashner 4abf0af4b1
gnu: openblas: Update make-flags comments and coding style.
* gnu/packages/maths.scm (openblas)[arguments]: In the make-flags use
the target-* macros. Adjust the wording describing why the different
architectures have the flags they do.
2023-06-01 11:14:03 +03:00
Efraim Flashner 076688fa1e
gnu: openblas: Update architectures we provide substitutes for.
* gnu/packages/maths.scm (openblas)[arguments]: Adjust the substitutable?
flag to only not provide substitutes when building for powerpc-linux.
Adjust the comment accordingly.
2023-06-01 11:14:03 +03:00
Efraim Flashner 872e1434f1
gnu: openblas-ilp64: Add powerpc64le-linux as a supported system.
* gnu/packages/maths.scm (openblas-ilp64)[supported-systems]: Add
powerpc64le-linux.
2023-06-01 11:14:03 +03:00
Ludovic Courtès a860dcbba9
gnu: armadillo: Remove input labels.
* gnu/packages/maths.scm (armadillo)[inputs]: Remove labels.
2023-05-04 17:06:43 +02:00
Felix Gruber 59640af1c5
gnu: dune-common: Skip tests that fail on aarch64-linux.
* gnu/packages/patches/dune-common-skip-failing-tests.patch: New file.
* gnu/packages/maths.scm (dune-common)[source]: Add it
* gnu/local.mk (dist_patch_DATA): Register it.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2023-05-04 13:08:59 +02:00
Felix Gruber 44d7044094
gnu: dune-pdelab: Update to 2.8.0-0.d5dddb6.
* gnu/packages/maths.scm (dune-pdelab): Update to 2.8.0-0.d5dddb6.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-05-02 11:58:16 +02:00
Felix Gruber e9248625d4
gnu: dune-functions: Update to 2.9.0.
* gnu/packages/maths.scm (dune-functions): Update to 2.9.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-05-02 11:58:15 +02:00
Felix Gruber 23e1a84f0a
gnu: dune-typetree: Update to 2.9.0.
* gnu/packages/maths.scm (dune-typetree): Update to 2.9.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-05-02 11:58:10 +02:00
Felix Gruber 3104c44ee2
gnu: dune-subgrid: Update to 2.9.0-1-e83f3f9.
* gnu/packages/maths.scm (dune-subgrid): Update to 2.9.0-1-e83f3f9.
  [source]: Update URL of dune-subgrid's Git repository.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-05-02 11:58:07 +02:00
Felix Gruber ab7de7df99
gnu: dune-alugrid: Update to 2.9.0.
* gnu/packages/maths.scm (dune-alugrid): Update to 2.9.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-05-02 11:58:06 +02:00
Felix Gruber d85ffbe381
gnu: dune-localfunctions: Update to 2.9.0.
* gnu/packages/maths.scm (dune-localfunctions): Update to 2.9.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-05-02 11:58:01 +02:00
Felix Gruber 53e4330774
gnu: dune-istl: Update to 2.9.0.
* gnu/packages/maths.scm (dune-istl): Update to 2.9.0.
  [source](patches): Add patch to fix test phase.
* gnu/packages/patches/dune-istl-fix-solver-playground.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-05-02 11:57:58 +02:00
Felix Gruber 2667b838c8
gnu: dune-grid: Update to 2.9.0.
* gnu/packages/maths.scm (dune-grid): Update to 2.9.0.
  [source](patches): Add patch to fix build.
* gnu/packages/patches/dune-grid-add-missing-include-cassert.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-05-02 11:57:55 +02:00
Felix Gruber 9d9fd54304
gnu: dune-uggrid: Update to 2.9.0.
* gnu/packages/maths.scm (dune-uggrid): Update to 2.9.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-05-02 11:57:54 +02:00
Felix Gruber 087f2f08a5
gnu: dune-geometry: Update to 2.9.0.
* gnu/packages/maths.scm (dune-geometry): Update to 2.9.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-05-02 11:57:52 +02:00
Felix Gruber ee9f5cef6e
gnu: dune-common: Update to 2.9.0.
* gnu/packages/maths.scm (dune-common): Update to 2.9.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-05-02 11:57:50 +02:00
Ludovic Courtès a46a6d8222
gnu: hypre: Add missing TeX Live packages.
* gnu/packages/maths.scm (hypre)[native-inputs]: Add texlive-alphalph
and texlive-enumitem to the list passed to 'texlive-updmap.cfg'.
2023-05-02 11:50:08 +02:00
Ricardo Wurmus 4d42fbd371
gnu: sleef: Adjust inputs.
* gnu/packages/maths.scm (sleef)[inputs]: Replace openssl with openssl-1.1;
remove mpfr.
[arguments]: Remove custom phase 'make-git-checkout-writable; use G-expression
for configure-flags.
2023-04-27 21:07:15 +02:00
Maxim Cournoyer 3bacd3c76a
Merge branch 'master' into core-updates.
Conflicts:
	gnu/local.mk
	gnu/packages/build-tools.scm
	gnu/packages/certs.scm
	gnu/packages/check.scm
	gnu/packages/compression.scm
	gnu/packages/cups.scm
	gnu/packages/fontutils.scm
	gnu/packages/gnuzilla.scm
	gnu/packages/guile.scm
	gnu/packages/ibus.scm
	gnu/packages/image-processing.scm
	gnu/packages/linux.scm
	gnu/packages/music.scm
	gnu/packages/nss.scm
	gnu/packages/pdf.scm
	gnu/packages/python-xyz.scm
	gnu/packages/qt.scm
	gnu/packages/ruby.scm
	gnu/packages/shells.scm
	gnu/packages/tex.scm
	gnu/packages/video.scm
	gnu/packages/vulkan.scm
	gnu/packages/web.scm
	gnu/packages/webkit.scm
	gnu/packages/wm.scm
2023-04-14 17:15:08 -04:00
Bruno Victal c4d18b9e65
gnu: Purge pre-1.3.0 deprecated packages.
* gnu/packages/bioinformatics.scm (deeptools): Remove variable.
* gnu/packages/efi.scm (efi_analyzer): Ditto.
* gnu/packages/guile.scm (guile-2.2/bug-fix, guile-json): Ditto.
* gnu/packages/image.scm (libjpeg): Ditto.
* gnu/packages/kde.scm (kdevplatform): Ditto
* gnu/packages/linphone.scm (linphoneqt): Ditto.
* gnu/packages/maths.scm (blis-sandybridge, blis-haswell, blis-knl): Ditto.
* gnu/packages/mpi.scm (hwloc-2.0): Ditto.
* gnu/packages/music.scm (python-abjad, zlfo): Ditto.
* gnu/packages/perl.scm (perl-base, perl-parent): Ditto.
* gnu/packages/tryton.scm (python-trytond): Ditto.
* gnu/packages/video.scm (gnome-mpv): Ditto.
* tests/graph.scm: Use guile-json-1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-04-12 08:29:19 -04:00
Liliana Marie Prikler 3a1a70b447
gnu: Separate potassco packages into their own module.
* gnu/packages/potassco.scm: New file.
* gnu/packages/maths.scm (libpotassco, clasp, clingo, python-clingo)
(python-telingo): Move to potassco module.  Adjust imports accordingly.
* gnu/packages/emacs-xyz.scm (emacs-pasp-mode): Move to potassco module.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add %D%/packages/potassco.scm.
2023-04-12 08:26:24 -04:00
Maxim Cournoyer 99b25b1313
Merge branch 'master' into staging 2023-03-31 10:48:54 -04:00
Maxim Cournoyer 3fa69a8d5d
gnu: hdf5-1.8: Delete trailing #t.
* gnu/packages/maths.scm (hdf5-1.8) [arguments]: Delete trailing #t.
2023-03-30 23:20:21 -04:00
Greg Hogan 8af64f3963
gnu: Add hdf5@1.14.
* gnu/packages/maths.scm (hdf5-1.14): New variable.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2023-03-30 23:15:13 -04:00
Greg Hogan cca7f2d7ae
gnu: hdf5@1.12: Update to 1.12.2.
* gnu/packages/maths.scm (hdf5-1.12): Update to 1.12.2.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2023-03-30 23:15:13 -04:00
Greg Hogan 2df9cf44b1
gnu: hdf5@1.10: Update to 1.10.9.
* gnu/packages/maths.scm (hdf5-1.10): Update to 1.10.9.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2023-03-30 23:15:13 -04:00
Greg Hogan 895de955ae
gnu: hdf5@1.8: Update to 1.8.23.
* gnu/packages/maths.scm (hdf5-1.8): Update to 1.8.23.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2023-03-30 23:14:22 -04:00
Nicolas Graves 1984d56b0e
gnu: Add scilab.
* gnu/packages/maths.scm (scilab): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-03-30 23:18:16 +02:00