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66961 Commits (ee8e4ba7aa39289746fe7ffb129d448e6cca78b4)

Author SHA1 Message Date
Mathieu Othacehe 76bea3f8bc
ci: Remove hydra support.
This removes hydra support to use Cuirass as the only continuous integration
system.

* build-aux/hydra/gnu-system.scm: Remove it.
* build-aux/hydra/guix-modular.scm: Ditto.
* build-aux/hydra/guix.scm: Ditto.
* build-aux/cuirass/hydra-to-cuirass.scm: Ditto.
* Makefile.am (EXTRA_DIST): Update it.
(hydra-jobs.scm): Remove it.
(cuirass-jobs.scm): Update it.
* build-aux/hydra/evaluate.scm: Move it to ...
* build-aux/cuirass/evaluate.scm: ... here.
* build-aux/cuirass/guix-modular.scm: Remove it.
* build-aux/cuirass/gnu-system.scm: Ditto.
* guix/packages.scm (%hydra-supported-systems): Rename it to ...
(%cuirass-supported-systems): ... this variable.
* build-aux/check-final-inputs-self-contained: Adapt it.
* etc/release-manifest.scm: Ditto.
* gnu/ci.scm (package->alist): Remove it.
(derivation->job): New procedure.
(package-job, package-cross-job, cross-jobs, image-jobs, system-test-jobs,
tarball-jobs): Use it.
(guix-jobs): New procedure.
(hydra-jobs): Rename it to ...
(cuirass-jobs): ... this procedure.
2021-03-10 08:49:48 +01:00
Mathieu Othacehe 0be2474d42
services: cuirass: Do not create the database directory.
Fixes: <https://issues.guix.gnu.org/46683>.

* gnu/services/cuirass.scm (cuirass-activation): Since the PostgreSQL switch,
it is no longer needed to create the database directory.
2021-03-10 08:49:48 +01:00
Mathieu Othacehe ff52d1156c
gnu: cuirass: Update to 0.0.1-73.14e1335.
* gnu/packages/ci.scm (cuirass): Update to 0.0.1-73.14e1335.
[arguments]: Enable tests and add new 'set-PATH-for-tests phase.
[native-inputs]: Add ephemeralpg.
2021-03-10 08:49:47 +01:00
Mathieu Othacehe 0d5e2c587f
gnu: guile-simple-zmq: Update to 0.0.0-9.b2ea97e.
* gnu/packages/guile-xyz.scm (guile-simple-zmq): Update to 0.0.0-9.b2ea97e.
2021-03-10 08:49:47 +01:00
Léo Le Bouter 80739ea480
gnu: gnucobol: Update to 3.1.2 [security fixes].
* gnu/packages/cobol.scm (gnucobol): Update to 3.1.2.
[arguments]: Add 'set-TERM phase before 'check to set the TERM environment
variable for tests that expect it.
2021-03-10 06:54:58 +01:00
Léo Le Bouter ca15eaeb06
gnu: osc: Update to 0.172.0 [fixes CVE-2019-3681].
* gnu/packages/build-tools.scm (osc): Update to 0.172.0.
[native-inputs]: Add python-chardet. Required by tests.
2021-03-10 05:01:38 +01:00
Léo Le Bouter f736dedc4f
gnu: python-m2crypto: Disable tests because they are date-sensitive.
* gnu/packages/python-crypto.scm (python-m2crypto)[arguments]: Set '#:tests?'
to '#f'.
2021-03-10 05:01:38 +01:00
Leo Famulari 014ef060ea
gnu: linux-libre 5.4: Update to 5.4.104.
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.104.
(linux-libre-5.4-pristine-source): Update hash.
2021-03-09 22:10:23 -05:00
Leo Famulari 79aafab07d
gnu: linux-libre 5.10: Update to 5.10.22.
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.22.
(linux-libre-5.10-pristine-source): Update hash.
2021-03-09 22:10:23 -05:00
Leo Famulari b38f73f35c
gnu: linux-libre: Update to 5.11.5.
* gnu/packages/linux.scm (linux-libre-5.11-version): Update to 5.11.5.
(linux-libre-5.11-pristine-source): Update hash.
2021-03-09 22:10:16 -05:00
Léo Le Bouter 674474f646
gnu: c-ares: Update to 1.17.1 [fixes CVE-2020-8277].
* gnu/packages/adns.scm (c-ares/fixed): New variable.
(c-ares)[replacement]: Graft.
2021-03-10 03:52:04 +01:00
Léo Le Bouter 852ba914a4
gnu: imagemagick/fixed: Retain version length for successful grafting.
* gnu/packages/imagemagick.scm (imagemagick/fixed):
[version]: Append 'g'.
[source]: Hardcode version.
2021-03-10 01:36:26 +01:00
Sébastien Lerique 81404a858c
gnu: password-store: Update to 1.7.3-1.918992c.
* gnu/packages/password-utils.scm (password-store): Update to
1.7.3-1.918992c.
[arguments]<#:phases>['wrap-path]: Add "wl-clipboard".
[inputs]: Add "wl-clipboard".

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2021-03-10 01:16:08 +01:00
Tobias Geerinckx-Rice 5d0f394b85
gnu: dcmtk: Update to 3.6.6.
* gnu/packages/image-processing.scm (dcmtk): Update to 3.6.6.
[inputs]: Add icu4c.
2021-03-10 01:16:07 +01:00
Tobias Geerinckx-Rice 4aef8e0af5
gnu: electron-cash: Update to 4.2.4.
* gnu/packages/finance.scm (electron-cash): Update to 4.2.4.
2021-03-10 01:16:07 +01:00
Tobias Geerinckx-Rice d5542627fa
gnu: range-v3: Fix typo in description.
* gnu/packages/cpp.scm (range-v3)[description]: Fix typo.
2021-03-10 01:16:07 +01:00
Tobias Geerinckx-Rice 42364648ba
gnu: fcitx5: Update to 5.0.5.
* gnu/packages/fcitx5.scm (fcitx5): Update to 5.0.5.
2021-03-10 01:16:07 +01:00
Tobias Geerinckx-Rice 5f299b4a31
gnu: lmdb: Update to 0.9.28.
* gnu/packages/databases.scm (lmdb): Update to 0.9.28.
2021-03-10 01:16:07 +01:00
Léo Le Bouter cbb5b5c4d5
gnu: git: Update to 2.30.2 [fixes CVE-2021-21300].
* gnu/packages/version-control.scm (git): Update to 2.30.2.
2021-03-10 01:09:26 +01:00
Léo Le Bouter 6320700b11
gnu: libtiff: Update to 4.2.0 [security fixes].
Non-exhaustively, fixes CVE-2020-35523, CVE-2020-35522 and CVE-2020-35521.

* gnu/packages/image.scm (libtiff/fixed): New variable.
(libtiff)[replacement]: Graft.
2021-03-10 00:52:47 +01:00
Raghav Gururajan 82a2f182c5
gnu: Add nextcloud-client.
* gnu/packages/messaging.scm (nextcloud-client): New variable.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-03-10 00:19:49 +01:00
Raghav Gururajan 92a432c1f8
gnu: Add qtsolutions.
* gnu/packages/qt.scm (qtsolutions): New variable.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-03-10 00:19:49 +01:00
Raghav Gururajan afd83de087
gnu: Add appstream.
* gnu/packages/freedesktop.scm (appstream): New variable.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-03-10 00:19:48 +01:00
Léo Le Bouter 82e887ba48
gnu: imagemagick: Update to 6.9.12-2 [security fixes].
* gnu/packages/imagemagick.scm (imagemagick/fixed): New variable.
(imagemagick)[replacement]: Graft.
2021-03-09 23:02:51 +01:00
Ricardo Wurmus 6a38d580c7
gnu: r-lubridate: Update to 1.7.10.
* gnu/packages/statistics.scm (r-lubridate): Update to 1.7.10.
2021-03-09 22:05:32 +01:00
Ricardo Wurmus 382f539b5e
gnu: r-pbkrtest: Update to 0.5.1.
* gnu/packages/statistics.scm (r-pbkrtest): Update to 0.5.1.
2021-03-09 22:05:32 +01:00
Ricardo Wurmus 15add0c264
gnu: r-quantreg: Update to 5.85.
* gnu/packages/statistics.scm (r-quantreg): Update to 5.85.
2021-03-09 22:05:32 +01:00
Ricardo Wurmus 27b17f5e6c
gnu: r-matrixmodels: Update to 0.5-0.
* gnu/packages/statistics.scm (r-matrixmodels): Update to 0.5-0.
2021-03-09 22:05:32 +01:00
Ricardo Wurmus 12580eb435
gnu: r-beeswarm: Update to 0.3.1.
* gnu/packages/statistics.scm (r-beeswarm): Update to 0.3.1.
2021-03-09 22:05:32 +01:00
Ricardo Wurmus 83f98e6317
gnu: r-hmisc: Update to 4.5-0.
* gnu/packages/statistics.scm (r-hmisc): Update to 4.5-0.
2021-03-09 22:05:32 +01:00
Ricardo Wurmus eddff93fd3
gnu: r-tidyr: Update to 1.1.3.
* gnu/packages/statistics.scm (r-tidyr): Update to 1.1.3.
2021-03-09 22:05:32 +01:00
Ricardo Wurmus 4f9f7e7eb2
gnu: r-glmnet: Update to 4.1-1.
* gnu/packages/statistics.scm (r-glmnet): Update to 4.1-1.
2021-03-09 22:05:32 +01:00
Ricardo Wurmus 7901124b5b
gnu: r-sparsem: Update to 1.81.
* gnu/packages/statistics.scm (r-sparsem): Update to 1.81.
2021-03-09 22:05:32 +01:00
Ricardo Wurmus 84e98bbc4f
gnu: r-segmented: Update to 1.3-3.
* gnu/packages/statistics.scm (r-segmented): Update to 1.3-3.
2021-03-09 22:05:31 +01:00
Ricardo Wurmus 395ab04137
gnu: r-rmarkdown: Update to 2.7.
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.7.
2021-03-09 22:05:31 +01:00
Ricardo Wurmus 658e44abdb
gnu: r-desc: Update to 1.3.0.
* gnu/packages/statistics.scm (r-desc): Update to 1.3.0.
[propagated-inputs]: Remove r-assertthat.
2021-03-09 22:05:31 +01:00
Ricardo Wurmus 2dcc88a153
gnu: r-data-table: Update to 1.14.0.
* gnu/packages/statistics.scm (r-data-table): Update to 1.14.0.
2021-03-09 22:05:31 +01:00
Ricardo Wurmus 47b8a239dc
gnu: r-dplyr: Update to 1.0.5.
* gnu/packages/statistics.scm (r-dplyr): Update to 1.0.5.
2021-03-09 22:05:31 +01:00
Ricardo Wurmus 9846034edc
gnu: r-tibble: Update to 3.1.0.
* gnu/packages/statistics.scm (r-tibble): Update to 3.1.0.
[propagated-inputs]: Remove r-cli and r-crayon.
2021-03-09 22:05:31 +01:00
Ricardo Wurmus 4a27e42fd6
gnu: r-testthat: Update to 3.0.2.
* gnu/packages/statistics.scm (r-testthat): Update to 3.0.2.
2021-03-09 22:05:31 +01:00
Ricardo Wurmus 440dd95f72
gnu: r-mime: Update to 0.10.
* gnu/packages/statistics.scm (r-mime): Update to 0.10.
2021-03-09 22:05:31 +01:00
Ricardo Wurmus 84bd32a964
gnu: r-svglite: Update to 2.0.0.
* gnu/packages/statistics.scm (r-svglite): Update to 2.0.0.
[inputs]: Add libpng and zlib.
[propagated-inputs]: Remove r-bh, r-gdtools, and r-rcpp; add r-cpp11 and
r-systemfonts.
2021-03-09 22:05:31 +01:00
Ricardo Wurmus ba522c9fa3
gnu: r-mgcv: Update to 1.8-34.
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-34.
2021-03-09 22:05:31 +01:00
Ricardo Wurmus ea2197cbe8
gnu: r-cluster: Update to 2.1.1.
* gnu/packages/statistics.scm (r-cluster): Update to 2.1.1.
2021-03-09 22:05:31 +01:00
Ricardo Wurmus 71939b503b
gnu: r-mass: Update to 7.3-53.1.
* gnu/packages/statistics.scm (r-mass): Update to 7.3-53.1.
2021-03-09 22:05:30 +01:00
Ricardo Wurmus 85b2d41eeb
gnu: r-boot: Update to 1.3-27.
* gnu/packages/statistics.scm (r-boot): Update to 1.3-27.
2021-03-09 22:05:30 +01:00
Ricardo Wurmus 31c9810b7e
gnu: r-ragg: Update to 1.1.1.
* gnu/packages/cran.scm (r-ragg): Update to 1.1.1.
2021-03-09 22:05:30 +01:00
Ricardo Wurmus 6c714c19f8
gnu: r-textshaping: Update to 0.3.1.
* gnu/packages/cran.scm (r-textshaping): Update to 0.3.1.
2021-03-09 22:05:30 +01:00
Ricardo Wurmus bf7ad534e4
gnu: r-mlr3tuning: Update to 0.7.0.
* gnu/packages/cran.scm (r-mlr3tuning): Update to 0.7.0.
2021-03-09 22:05:30 +01:00
Ricardo Wurmus 9a9d470ae0
gnu: r-mlr3: Update to 0.11.0.
* gnu/packages/cran.scm (r-mlr3): Update to 0.11.0.
[propagated-inputs]: Add r-palmerpenguins and r-parallelly.
2021-03-09 22:05:30 +01:00
Ricardo Wurmus ca718b9e34
gnu: r-paradox: Update to 0.7.1.
* gnu/packages/cran.scm (r-paradox): Update to 0.7.1.
2021-03-09 22:05:30 +01:00
Ricardo Wurmus e08e5f9fe2
gnu: r-tune: Update to 0.1.3.
* gnu/packages/cran.scm (r-tune): Update to 0.1.3.
[propagated-inputs]: Remove r-hardhat.
2021-03-09 22:05:30 +01:00
Ricardo Wurmus 2d89c723ab
gnu: r-dicedesign: Update to 1.9.
* gnu/packages/cran.scm (r-dicedesign): Update to 1.9.
2021-03-09 22:05:30 +01:00
Ricardo Wurmus b5b344fb26
gnu: r-rsample: Update to 0.0.9.
* gnu/packages/cran.scm (r-rsample): Update to 0.0.9.
[propagated-inputs]: Remove r-modeldata.
2021-03-09 22:05:30 +01:00
Ricardo Wurmus 8b1f08ba04
gnu: r-survminer: Update to 0.4.9.
* gnu/packages/cran.scm (r-survminer): Update to 0.4.9.
[propagated-inputs]: Add r-ggtext.
2021-03-09 22:05:30 +01:00
Ricardo Wurmus abdb1090a7
gnu: r-flexsurv: Update to 2.0.
* gnu/packages/cran.scm (r-flexsurv): Update to 2.0.
[propagated-inputs]: Add r-assertthat, r-dplyr, r-generics, r-magrittr,
r-matrix, r-numderiv, r-purrr, r-rlang, r-rstpm2, and r-tidyselect.
2021-03-09 22:05:29 +01:00
Ricardo Wurmus 2be47c7a9a
gnu: r-isoband: Update to 0.2.4.
* gnu/packages/cran.scm (r-isoband): Update to 0.2.4.
[propagated-inputs]: Remove r-testthat.
2021-03-09 22:05:29 +01:00
Ricardo Wurmus e59f4ecda8
gnu: r-erm: Update to 1.0-2.
* gnu/packages/cran.scm (r-erm): Update to 1.0-2.
2021-03-09 22:05:29 +01:00
Ricardo Wurmus b631f7f8e4
gnu: r-openmx: Update to 2.19.1.
* gnu/packages/cran.scm (r-openmx): Update to 2.19.1.
2021-03-09 22:05:29 +01:00
Ricardo Wurmus 60f8539526
gnu: r-isocodes: Update to 2021.02.24.
* gnu/packages/cran.scm (r-isocodes): Update to 2021.02.24.
2021-03-09 22:05:29 +01:00
Ricardo Wurmus 61967afbc5
gnu: r-imager: Update to 0.42.7.
* gnu/packages/cran.scm (r-imager): Update to 0.42.7.
2021-03-09 22:05:29 +01:00
Ricardo Wurmus 8bf21d4076
gnu: r-gamlss: Update to 5.3-1.
* gnu/packages/cran.scm (r-gamlss): Update to 5.3-1.
2021-03-09 22:05:29 +01:00
Ricardo Wurmus 894308dddb
gnu: r-lifecycle: Update to 1.0.0.
* gnu/packages/cran.scm (r-lifecycle): Update to 1.0.0.
2021-03-09 22:05:29 +01:00
Ricardo Wurmus a9797ab658
gnu: r-parameters: Update to 0.12.0.
* gnu/packages/cran.scm (r-parameters): Update to 0.12.0.
2021-03-09 22:05:29 +01:00
Ricardo Wurmus ce5c9704b3
gnu: r-kableextra: Update to 1.3.4.
* gnu/packages/cran.scm (r-kableextra): Update to 1.3.4.
[propagated-inputs]: Add r-svglite.
2021-03-09 22:05:29 +01:00
Ricardo Wurmus fa82677b27
gnu: r-dalex: Update to 2.1.1.
* gnu/packages/cran.scm (r-dalex): Update to 2.1.1.
2021-03-09 22:05:28 +01:00
Ricardo Wurmus 6802fe3cb7
gnu: r-xmlparsedata: Update to 1.0.5.
* gnu/packages/cran.scm (r-xmlparsedata): Update to 1.0.5.
2021-03-09 22:05:28 +01:00
Ricardo Wurmus 744190fe45
gnu: r-ggraph: Update to 2.0.5.
* gnu/packages/cran.scm (r-ggraph): Update to 2.0.5.
2021-03-09 22:05:28 +01:00
Ricardo Wurmus df20df3512
gnu: r-ggforce: Update to 0.3.3.
* gnu/packages/cran.scm (r-ggforce): Update to 0.3.3.
2021-03-09 22:05:28 +01:00
Ricardo Wurmus a5cfb3f330
gnu: r-farver: Update to 2.1.0.
* gnu/packages/cran.scm (r-farver): Update to 2.1.0.
2021-03-09 22:05:28 +01:00
Ricardo Wurmus b96724c423
gnu: r-arsenal: Update to 3.6.2.
* gnu/packages/cran.scm (r-arsenal): Update to 3.6.2.
2021-03-09 22:05:28 +01:00
Ricardo Wurmus ab8c8693c1
gnu: r-genetics: Update to 1.3.8.1.3.
* gnu/packages/cran.scm (r-genetics): Update to 1.3.8.1.3.
2021-03-09 22:05:28 +01:00
Ricardo Wurmus 5a3996538c
gnu: r-deldir: Update to 0.2-10.
* gnu/packages/cran.scm (r-deldir): Update to 0.2-10.
2021-03-09 22:05:28 +01:00
Ricardo Wurmus 8c866232e1
gnu: r-units: Update to 0.7-0.
* gnu/packages/cran.scm (r-units): Update to 0.7-0.
2021-03-09 22:05:28 +01:00
Ricardo Wurmus a9ab876114
gnu: r-gamlss-dist: Update to 5.3-2.
* gnu/packages/cran.scm (r-gamlss-dist): Update to 5.3-2.
2021-03-09 22:05:28 +01:00
Ricardo Wurmus 34471fa1b2
gnu: r-shinyjqui: Update to 0.4.0.
* gnu/packages/cran.scm (r-shinyjqui): Update to 0.4.0.
2021-03-09 22:05:28 +01:00
Ricardo Wurmus 089a3a7fcd
gnu: r-epi: Update to 2.44.
* gnu/packages/cran.scm (r-epi): Update to 2.44.
2021-03-09 22:05:28 +01:00
Ricardo Wurmus 690940cc53
gnu: r-dotcall64: Update to 1.0-1.
* gnu/packages/cran.scm (r-dotcall64): Update to 1.0-1.
2021-03-09 22:05:28 +01:00
Ricardo Wurmus b63f13b59f
gnu: r-gargle: Update to 1.0.0.
* gnu/packages/cran.scm (r-gargle): Update to 1.0.0.
2021-03-09 22:05:27 +01:00
Ricardo Wurmus 1443bb0f19
gnu: r-tiff: Update to 0.1-7.
* gnu/packages/cran.scm (r-tiff): Update to 0.1-7.
2021-03-09 22:05:27 +01:00
Ricardo Wurmus cf1ef75cc4
gnu: r-fftwtools: Update to 0.9-11.
* gnu/packages/cran.scm (r-fftwtools): Update to 0.9-11.
[native-inputs]: Add pkg-config.
2021-03-09 22:05:27 +01:00
Ricardo Wurmus 7fab62cecb
gnu: r-ouch: Update to 2.15-1.
* gnu/packages/cran.scm (r-ouch): Update to 2.15-1.
2021-03-09 22:05:27 +01:00
Ricardo Wurmus 1ef3abaff3
gnu: r-activity: Update to 1.3.1.
* gnu/packages/cran.scm (r-activity): Update to 1.3.1.
2021-03-09 22:05:27 +01:00
Ricardo Wurmus 1b9009ce98
gnu: r-rgl: Update to 0.105.22.
* gnu/packages/cran.scm (r-rgl): Update to 0.105.22.
2021-03-09 22:05:27 +01:00
Ricardo Wurmus ed7f3e3c2f
gnu: r-rcppparallel: Update to 5.0.3.
* gnu/packages/cran.scm (r-rcppparallel): Update to 5.0.3.
2021-03-09 22:05:27 +01:00
Ricardo Wurmus 7db329a300
gnu: r-mvabund: Update to 4.1.9.
* gnu/packages/cran.scm (r-mvabund): Update to 4.1.9.
2021-03-09 22:05:27 +01:00
Ricardo Wurmus 70d490eb73
gnu: r-gert: Update to 1.2.0.
* gnu/packages/cran.scm (r-gert): Update to 1.2.0.
2021-03-09 22:05:27 +01:00
Ricardo Wurmus 4c113c54f1
gnu: r-labelled: Update to 2.8.0.
* gnu/packages/cran.scm (r-labelled): Update to 2.8.0.
[propagated-inputs]: Remove r-pillar; add r-stringr.
2021-03-09 22:05:27 +01:00
Ricardo Wurmus 2dae640d8a
gnu: r-doby: Update to 4.6.9.
* gnu/packages/cran.scm (r-doby): Update to 4.6.9.
2021-03-09 22:05:27 +01:00
Ricardo Wurmus c1037edc89
gnu: r-deriv: Update to 4.1.3.
* gnu/packages/cran.scm (r-deriv): Update to 4.1.3.
2021-03-09 22:05:27 +01:00
Ricardo Wurmus 111400674f
gnu: r-insight: Update to 0.13.1.
* gnu/packages/cran.scm (r-insight): Update to 0.13.1.
2021-03-09 22:05:26 +01:00
Ricardo Wurmus ad037d6ecb
gnu: r-officer: Update to 0.3.17.
* gnu/packages/cran.scm (r-officer): Update to 0.3.17.
2021-03-09 22:05:26 +01:00
Ricardo Wurmus 0281b306ca
gnu: r-rdpack: Update to 2.1.1.
* gnu/packages/cran.scm (r-rdpack): Update to 2.1.1.
[propagated-inputs]: Remove r-gbrd.
2021-03-09 22:05:26 +01:00
Ricardo Wurmus fdf375346a
gnu: r-rstatix: Update to 0.7.0.
* gnu/packages/cran.scm (r-rstatix): Update to 0.7.0.
2021-03-09 22:05:26 +01:00
Ricardo Wurmus b6d9965d41
gnu: r-ggsignif: Update to 0.6.1.
* gnu/packages/cran.scm (r-ggsignif): Update to 0.6.1.
2021-03-09 22:05:26 +01:00
Ricardo Wurmus 2c49fe4063
gnu: r-renv: Update to 0.13.0.
* gnu/packages/cran.scm (r-renv): Update to 0.13.0.
2021-03-09 22:05:26 +01:00
Ricardo Wurmus b592c4dbe6
gnu: r-rastervis: Update to 0.50.
* gnu/packages/cran.scm (r-rastervis): Update to 0.50.
[propagated-inputs]: Add r-terra.
2021-03-09 22:05:26 +01:00
Ricardo Wurmus 9d9d11b5d3
gnu: r-promises: Update to 1.2.0.1.
* gnu/packages/cran.scm (r-promises): Update to 1.2.0.1.
2021-03-09 22:05:26 +01:00
Ricardo Wurmus 0505facdd5
gnu: r-rio: Update to 0.5.26.
* gnu/packages/cran.scm (r-rio): Update to 0.5.26.
[native-inputs]: Add r-knitr.
2021-03-09 22:05:26 +01:00
Ricardo Wurmus 1774703383
gnu: r-tinytex: Update to 0.30.
* gnu/packages/cran.scm (r-tinytex): Update to 0.30.
2021-03-09 22:05:26 +01:00
Ricardo Wurmus bd1ff10ea0
gnu: r-pillar: Update to 1.5.1.
* gnu/packages/cran.scm (r-pillar): Update to 1.5.1.
[native-inputs]: Add r-knitr.
2021-03-09 22:05:26 +01:00
Ricardo Wurmus 6fe7e138b9
gnu: r-argparser: Update to 0.7.1.
* gnu/packages/cran.scm (r-argparser): Update to 0.7.1.
2021-03-09 22:05:26 +01:00
Ricardo Wurmus 5136cc1306
gnu: r-cli: Update to 2.3.1.
* gnu/packages/cran.scm (r-cli): Update to 2.3.1.
2021-03-09 22:05:25 +01:00
Ricardo Wurmus 0496ce3c44
gnu: r-broom: Update to 0.7.5.
* gnu/packages/cran.scm (r-broom): Update to 0.7.5.
2021-03-09 22:05:25 +01:00
Ricardo Wurmus 6c7d9efdd8
gnu: r-ipred: Update to 0.9-10.
* gnu/packages/cran.scm (r-ipred): Update to 0.9-10.
2021-03-09 22:05:25 +01:00
Ricardo Wurmus b3700e61d4
gnu: r-energy: Update to 1.7-8.
* gnu/packages/cran.scm (r-energy): Update to 1.7-8.
[propagated-inputs]: Add r-gsl.
2021-03-09 22:05:25 +01:00
Ricardo Wurmus 37097b923c
gnu: r-rmpi: Update to 0.6-9.1.
* gnu/packages/cran.scm (r-rmpi): Update to 0.6-9.1.
2021-03-09 22:05:25 +01:00
Ricardo Wurmus 4fcbe65d61
gnu: r-proxy: Update to 0.4-25.
* gnu/packages/cran.scm (r-proxy): Update to 0.4-25.
2021-03-09 22:05:25 +01:00
Ricardo Wurmus adbd713085
gnu: r-ggally: Update to 2.1.1.
* gnu/packages/cran.scm (r-ggally): Update to 2.1.1.
2021-03-09 22:05:25 +01:00
Ricardo Wurmus 7ff93d3483
gnu: r-ffbase: Update to 0.13.3.
* gnu/packages/cran.scm (r-ffbase): Update to 0.13.3.
2021-03-09 22:05:25 +01:00
Ricardo Wurmus 84e39b3d99
gnu: r-pkgload: Update to 1.2.0.
* gnu/packages/cran.scm (r-pkgload): Update to 1.2.0.
2021-03-09 22:05:25 +01:00
Ricardo Wurmus 601a112bb2
gnu: r-ps: Update to 1.6.0.
* gnu/packages/cran.scm (r-ps): Update to 1.6.0.
2021-03-09 22:05:25 +01:00
Ricardo Wurmus f0f2e2cbda
gnu: r-partykit: Update to 1.2-13.
* gnu/packages/cran.scm (r-partykit): Update to 1.2-13.
2021-03-09 22:05:25 +01:00
Ricardo Wurmus fa00e35b9e
gnu: r-rticles: Update to 0.19.
* gnu/packages/cran.scm (r-rticles): Update to 0.19.
2021-03-09 22:05:25 +01:00
Ricardo Wurmus 260259f5ef
gnu: r-waldo: Update to 0.2.5.
* gnu/packages/cran.scm (r-waldo): Update to 0.2.5.
2021-03-09 22:05:25 +01:00
Ricardo Wurmus 4be2e0f309
gnu: r-cachem: Update to 1.0.4.
* gnu/packages/cran.scm (r-cachem): Update to 1.0.4.
2021-03-09 22:05:24 +01:00
Ricardo Wurmus ef8e4f4172
gnu: r-wgcna: Update to 1.70-3.
* gnu/packages/bioconductor.scm (r-wgcna): Update to 1.70-3.
2021-03-09 22:05:24 +01:00
Ricardo Wurmus 7fffee5e34
gnu: Add r-terra.
* gnu/packages/cran.scm (r-terra): New variable.
2021-03-09 22:05:24 +01:00
Ricardo Wurmus 1bbf632574
gnu: Add r-ggtext.
* gnu/packages/cran.scm (r-ggtext): New variable.
2021-03-09 22:05:24 +01:00
Ricardo Wurmus c341a4d02e
gnu: Add r-gridtext.
* gnu/packages/cran.scm (r-gridtext): New variable.
2021-03-09 22:05:24 +01:00
Ricardo Wurmus 91aa72bfe2
gnu: Add r-palmerpenguins.
* gnu/packages/cran.scm (r-palmerpenguins): New variable.
2021-03-09 22:05:24 +01:00
Ricardo Wurmus bcdf0cf3a5
gnu: Add r-rstpm2.
* gnu/packages/cran.scm (r-rstpm2): New variable.
2021-03-09 22:05:24 +01:00
Ricardo Wurmus 3c04e179b7
gnu: Add r-fastghquad.
* gnu/packages/cran.scm (r-fastghquad): New variable.
2021-03-09 22:05:24 +01:00
Efraim Flashner 80c83756e9
gnu: evisum: Update to 0.5.11.
* gnu/packages/enlightenment.scm (evisum): Update to 0.5.11.
2021-03-09 22:59:20 +02:00
Felix Gruber 251b0f7a6f
gnu: vtk: Fix build failure.
* gnu/packages/image-processing.scm (vtk): Fix build failure.
[source]: Add patch to fix build failure with recent versions of freetype.
* gnu/packages/patches/vtk-fix-freetypetools-build-failure.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-03-09 22:32:41 +02:00
Efraim Flashner 5b74e21e12
gnu: ruby-pstree: Update to 0.3.0.
* gnu/packages/ruby.scm (ruby-pstree): Update to 0.3.0.
2021-03-09 22:27:39 +02:00
Nicolas Goaziou d019bce1a3
gnu: emacs-php-mode: Update to 1.24.0.
* gnu/packages/emacs-xyz.scm (emacs-php-mode): Update to 1.24.0.
[arguments]: Include "lisp/" directory, and add it to load path before byte-compiling.
2021-03-09 21:08:36 +01:00
Raghav Gururajan eb4ed63fc4
gnu: Rename "t" to "t-todo-manager".
* gnu/packages/task-management.scm (t): Rename to t-todo-manager.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-03-09 18:45:51 +01:00
Ludovic Courtès b1cabedd28
gnu: xvfb-run: Fix syntax error.
Error introduced in 07f77812c4.

* gnu/packages/xorg.scm (xvfb-run)[license]: Fix syntax.
2021-03-09 16:17:56 +01:00
Ludovic Courtès 973c6f18eb
gnu: guile-next: Reintroduce as a 3.0.x snapshot.
* gnu/packages/guile.scm (guile-next): Rewrite as a 3.0.x snapshot.
2021-03-09 16:16:05 +01:00
Tobias Geerinckx-Rice 07f77812c4
gnu: xvfb-run: Add man page licence.
* gnu/packages/xorg.scm (xvfb-run)[license]: Add gpl2+.
2021-03-09 15:29:08 +01:00
Tobias Geerinckx-Rice 35d9d5bfa6
gnu: s-tui: Update to 1.1.1.
* gnu/packages/admin.scm (s-tui): Update to 1.1.1.
2021-03-09 15:24:51 +01:00
Tobias Geerinckx-Rice 77077d90cd
gnu: inxi-minimal: Update to 3.3.01-1.
* gnu/packages/admin.scm (inxi-minimal): Update to 3.3.01-1.
2021-03-09 15:24:51 +01:00
Tobias Geerinckx-Rice 1e4b80ad65
gnu: sigrok-cli: Update to 0.7.2.
* gnu/packages/electronics.scm (sigrok-cli): Update to 0.7.2.
2021-03-09 15:24:51 +01:00
Tobias Geerinckx-Rice 2e6d40b373
gnu: lrzip: Update to 0.641.
* gnu/packages/compression.scm (lrzip): Update to 0.641.
2021-03-09 15:24:50 +01:00
Tobias Geerinckx-Rice 4685a468f8
gnu: libime: Update to 1.0.4.
* gnu/packages/fcitx5.scm (libime): Update to 1.0.4.
2021-03-09 15:24:50 +01:00
Tobias Geerinckx-Rice 362d478746
gnu: libfastjson: Update to 0.99.9.
* gnu/packages/c.scm (libfastjson): Update to 0.99.9.
2021-03-09 15:24:50 +01:00
Tobias Geerinckx-Rice 5a948f3142
gnu: progress: Update to 0.16.
* gnu/packages/admin.scm (progress): Update to 0.16.
2021-03-09 15:24:50 +01:00
Tobias Geerinckx-Rice 9f87758fd5
gnu: Add xvfb-run.
* gnu/packages/xorg.scm (xvfb-run): New public variable.
2021-03-09 15:24:49 +01:00
Tobias Geerinckx-Rice 4c6fa85136
gnu: ppsspp: Update to 1.11.3.
* gnu/packages/emulators.scm (ppsspp): Update to 1.11.3.
2021-03-09 15:24:49 +01:00
Tobias Geerinckx-Rice 17db882d29
gnu: solaar: Fix home page.
* gnu/packages/admin.scm (solaar)[home-page]: Correct.
2021-03-09 15:24:49 +01:00
Tobias Geerinckx-Rice de1f866465
gnu: solaar: Update to 1.0.5.
* gnu/packages/admin.scm (solaar): Update to 1.0.5.
2021-03-09 15:24:49 +01:00
Efraim Flashner d90165826c
gnu: solfege: Build with older texinfo.
The package failed to build with texinfo-6.7.

* gnu/packages/music.scm (solfege)[native-inputs]: Replace texinfo with
texinfo-5.
2021-03-09 16:13:18 +02:00
Efraim Flashner c3fb753045
gnu: python-logwrap: Update to 8.2.0.post0.
* gnu/packages/python-xyz.scm (python-logwrap): Update to 8.2.0.post0.
[arguments]: Disable tests. Replace 'check phase.
[propagated-inputs]: Remove python-six, python-typing.
[native-inputs]: Remove unzip, python-pytest-cov, python-pytest-runner.
Add python-setuptools-scm, python-toml, python-wheel.
[home-page]: Update to new upstream URI.
2021-03-09 16:04:50 +02:00
Efraim Flashner 12640deb50
gnu: symengine: Fix build.
* gnu/packages/algebra.scm (symengine)[native-inputs]: Remove llvm.
[arguments]: Adjust accordingly.
2021-03-09 15:44:31 +02:00
Efraim Flashner 40b3e9da49
gnu: xygrib: Fix compiling with newer qt.
* gnu/packages/geo.scm (xygrib)[source]: Adjust snippet to add missing
include header.
2021-03-09 15:32:05 +02:00
Ricardo Wurmus 133a918923
gnu: trim-galore: Update to 0.6.6.
* gnu/packages/bioinformatics.scm (trim-galore): Update to 0.6.6.
2021-03-09 11:54:59 +01:00
Ricardo Wurmus 49d85b3f11
gnu: bbmap: Update to 38.90.
* gnu/packages/bioinformatics.scm (bbmap): Update to 38.90.
2021-03-09 11:54:59 +01:00
Christopher Baines a728889951
gnu: rust-1.26: Remove aarch64-linux from the supported systems.
Because this package is a transitive input to many rust packages, Cuirass is
spending lots of time failing to build it on ci.guix.gnu.org. This change will
hopefully help with that issue.

* gnu/packages/rust.scm (rust-1.26)[supported-systems]: Remove aarch64-linux.
2021-03-09 09:04:57 +00:00
Leo Famulari d099c9c09b
gnu: VLC: Ensure AV1 files are played with dav1d by default.
* gnu/packages/video.scm (vlc)[inputs]: Add dav1d.
2021-03-09 03:42:18 -05:00