Ricardo Wurmus
|
ad457d0114
|
gnu: r-experimenthub: Update to 2.8.1.
* gnu/packages/bioconductor.scm (r-experimenthub): Update to 2.8.1.
|
2023-07-17 14:55:08 +02:00 |
|
Ricardo Wurmus
|
22db2a63fe
|
gnu: r-flowcore: Update to 2.12.1.
* gnu/packages/bioconductor.scm (r-flowcore): Update to 2.12.1.
|
2023-07-17 14:55:08 +02:00 |
|
Ricardo Wurmus
|
2b5b595708
|
gnu: r-clusterprofiler: Update to 4.8.2.
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.8.2.
|
2023-07-17 14:55:08 +02:00 |
|
Ricardo Wurmus
|
79b508e3f6
|
gnu: r-gosemsim: Update to 2.26.1.
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.26.1.
|
2023-07-17 14:55:07 +02:00 |
|
Ricardo Wurmus
|
d29a060d20
|
gnu: r-icobra: Update to 1.28.1.
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.28.1.
|
2023-07-17 14:55:07 +02:00 |
|
Ricardo Wurmus
|
d1979fe4bb
|
gnu: r-treeio: Update to 1.24.2.
* gnu/packages/bioconductor.scm (r-treeio): Update to 1.24.2.
|
2023-07-17 14:55:07 +02:00 |
|
Ricardo Wurmus
|
6f9894d63c
|
gnu: r-affycomp: Update to 1.76.1.
* gnu/packages/bioconductor.scm (r-affycomp): Update to 1.76.1.
|
2023-07-17 14:55:07 +02:00 |
|
Ricardo Wurmus
|
f2f27c4952
|
gnu: r-tcgabiolinks: Update to 2.28.3.
* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.28.3.
|
2023-07-12 14:29:11 +02:00 |
|
Ricardo Wurmus
|
2ef18c24a4
|
gnu: r-bionero: Update to 1.8.5.
* gnu/packages/bioconductor.scm (r-bionero): Update to 1.8.5.
[propagated-inputs]: Remove r-ggnewscale and r-networkd3; add r-ggdendro and r-rlang.
|
2023-07-12 14:29:11 +02:00 |
|
Ricardo Wurmus
|
cbdaf26d0c
|
gnu: r-biocthis: Update to 1.10.3.
* gnu/packages/bioconductor.scm (r-biocthis): Update to 1.10.3.
|
2023-07-12 14:29:11 +02:00 |
|
Ricardo Wurmus
|
165a4755a4
|
gnu: r-basilisk: Update to 1.12.1.
* gnu/packages/bioconductor.scm (r-basilisk): Update to 1.12.1.
|
2023-07-12 14:29:11 +02:00 |
|
Ricardo Wurmus
|
bdd11e0229
|
gnu: r-delayedmatrixstats: Update to 1.22.1.
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.22.1.
|
2023-07-12 14:29:11 +02:00 |
|
Ricardo Wurmus
|
5a61307327
|
gnu: r-sparsematrixstats: Update to 1.12.2.
* gnu/packages/bioconductor.scm (r-sparsematrixstats): Update to 1.12.2.
|
2023-07-12 14:29:11 +02:00 |
|
Ricardo Wurmus
|
72c0125649
|
gnu: r-fishpond: Update to 2.6.2.
* gnu/packages/bioconductor.scm (r-fishpond): Update to 2.6.2.
|
2023-07-12 14:29:11 +02:00 |
|
Ricardo Wurmus
|
3bfbd6ddd8
|
gnu: r-bioccheck: Update to 1.36.1.
* gnu/packages/bioconductor.scm (r-bioccheck): Update to 1.36.1.
|
2023-07-12 14:29:11 +02:00 |
|
Ricardo Wurmus
|
aada7f3a53
|
gnu: r-universalmotif: Update to 1.18.1.
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.18.1.
|
2023-07-12 14:29:11 +02:00 |
|
Ricardo Wurmus
|
e728562cd3
|
gnu: r-variancepartition: Update to 1.30.2.
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.30.2.
|
2023-07-12 14:29:11 +02:00 |
|
Ricardo Wurmus
|
c4ea43f75c
|
gnu: r-variantfiltering: Update to 1.36.1.
* gnu/packages/bioconductor.scm (r-variantfiltering): Update to 1.36.1.
|
2023-07-12 14:29:11 +02:00 |
|
Ricardo Wurmus
|
8637eba2a5
|
gnu: r-quasr: Update to 1.40.1.
* gnu/packages/bioconductor.scm (r-quasr): Update to 1.40.1.
|
2023-07-12 14:29:11 +02:00 |
|
Ricardo Wurmus
|
1d53aa680e
|
gnu: r-motifbreakr: Update to 2.14.2.
* gnu/packages/bioconductor.scm (r-motifbreakr): Update to 2.14.2.
|
2023-07-12 14:29:11 +02:00 |
|
Ricardo Wurmus
|
a98f8bdcf3
|
gnu: r-lpsymphony: Update to 1.28.1.
* gnu/packages/bioconductor.scm (r-lpsymphony): Update to 1.28.1.
[native-inputs]: Add gfortran.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
0514c45d4a
|
gnu: r-glmgampoi: Update to 1.12.2.
* gnu/packages/bioconductor.scm (r-glmgampoi): Update to 1.12.2.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
75a5504e49
|
gnu: r-interactionset: Update to 1.28.1.
* gnu/packages/bioconductor.scm (r-interactionset): Update to 1.28.1.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
6652f72e13
|
gnu: r-matrixgenerics: Update to 1.12.2.
* gnu/packages/bioconductor.scm (r-matrixgenerics): Update to 1.12.2.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
1b83659902
|
gnu: r-systempiper: Update to 2.6.3.
* gnu/packages/bioconductor.scm (r-systempiper): Update to 2.6.3.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
0a0304ef3a
|
gnu: r-summarizedexperiment: Update to 1.30.2.
* gnu/packages/bioconductor.scm (r-summarizedexperiment): Update to 1.30.2.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
464ad1fd79
|
gnu: r-maaslin2: Update to 1.14.1.
* gnu/packages/bioconductor.scm (r-maaslin2): Update to 1.14.1.
[propagated-inputs]: Remove r-lpsymphony; add r-tibble.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
5588562fb9
|
gnu: r-limma: Update to 3.56.2.
* gnu/packages/bioconductor.scm (r-limma): Update to 3.56.2.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
5db8d3e600
|
gnu: r-lfa: Update to 2.0.11.
* gnu/packages/bioconductor.scm (r-lfa): Update to 2.0.11.
[propagated-inputs]: Add r-rspectra.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
3193a2a04d
|
gnu: r-genomicfeatures: Update to 1.52.1.
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.52.1.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
2b62bc3f67
|
gnu: r-deseq2: Update to 1.40.2.
* gnu/packages/bioconductor.scm (r-deseq2): Update to 1.40.2.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
6604189891
|
gnu: r-biomart: Update to 2.56.1.
* gnu/packages/bioconductor.scm (r-biomart): Update to 2.56.1.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
1f0633db11
|
gnu: r-annotationforge: Update to 1.42.2.
* gnu/packages/bioconductor.scm (r-annotationforge): Update to 1.42.2.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
c397d6a5e1
|
gnu: r-genomeinfodb: Update to 1.36.1.
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.36.1.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
3c201e1aab
|
gnu: r-annotationdbi: Update to 1.62.2.
* gnu/packages/bioconductor.scm (r-annotationdbi): Update to 1.62.2.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
565d84170a
|
gnu: r-affy: Update to 1.78.1.
* gnu/packages/bioconductor.scm (r-affy): Update to 1.78.1.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
a9d140996c
|
gnu: r-isoformswitchanalyzer: Update to 2.0.1.
* gnu/packages/bioconductor.scm (r-isoformswitchanalyzer): Update to 2.0.1.
[propagated-inputs]: Remove r-drimseq; add r-biocparallel, r-pfamanalyzer, r-s4vectors,
r-saturn, r-summarizedexperiment, r-sva, and r-tidyr.
|
2023-07-12 14:29:09 +02:00 |
|
Ricardo Wurmus
|
b864a5956f
|
gnu: r-iranges: Update to 2.34.1.
* gnu/packages/bioconductor.scm (r-iranges): Update to 2.34.1.
|
2023-07-12 14:29:09 +02:00 |
|
Ricardo Wurmus
|
5eaf9f6b83
|
gnu: r-delayedarray: Update to 0.26.6.
* gnu/packages/bioconductor.scm (r-delayedarray): Update to 0.26.6.
|
2023-07-12 14:29:09 +02:00 |
|
Ricardo Wurmus
|
6e83dee12a
|
gnu: r-bambu: Update to 3.2.5.
* gnu/packages/bioconductor.scm (r-bambu): Update to 3.2.5.
|
2023-07-12 14:29:09 +02:00 |
|
Ricardo Wurmus
|
f0c82ddced
|
gnu: r-alevinqc: Update to 1.16.1.
* gnu/packages/bioconductor.scm (r-alevinqc): Update to 1.16.1.
|
2023-07-12 14:29:09 +02:00 |
|
Ricardo Wurmus
|
4db85c197b
|
gnu: r-ancombc: Update to 2.2.1.
* gnu/packages/bioconductor.scm (r-ancombc): Update to 2.2.1.
[propagated-inputs]: Remove r-dplyr, r-emmeans, r-magrittr, r-rlang, r-rngtools,
r-tibble, and r-tidyr; add r-gtools, r-matrix, and r-multcomp.
|
2023-07-12 14:29:09 +02:00 |
|
Ricardo Wurmus
|
558637533f
|
gnu: r-gdsfmt: Update to 1.36.1.
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.36.1.
[properties]: Tell updater to leave the extra inputs be.
|
2023-07-12 14:29:09 +02:00 |
|
Ricardo Wurmus
|
b4cafa71ae
|
gnu: Add r-saturn.
* gnu/packages/bioconductor.scm (r-saturn): New variable.
|
2023-07-12 14:29:09 +02:00 |
|
Ricardo Wurmus
|
990bac0ea5
|
gnu: Add r-pfamanalyzer.
* gnu/packages/bioconductor.scm (r-pfamanalyzer): New variable.
|
2023-07-12 14:29:09 +02:00 |
|
Ricardo Wurmus
|
b10bff65be
|
gnu: r-mzr: Update to 2.34.1.
* gnu/packages/bioconductor.scm (r-mzr): Update to 2.34.1.
[properties]: Tell updater to not remove the "boost" input.
|
2023-07-12 14:29:09 +02:00 |
|
Ricardo Wurmus
|
bb570c1534
|
gnu: r-ggpicrust2: Update to 1.7.1.
* gnu/packages/bioconductor.scm (r-ggpicrust2): Update to 1.7.1.
[propagated-inputs]: Remove r-phyloseq; add r-ggh4x.
|
2023-07-12 14:29:03 +02:00 |
|
Ricardo Wurmus
|
d669b30658
|
gnu: r-scistreer: Update to 1.2.0.
* gnu/packages/bioconductor.scm (r-scistreer): Update to 1.2.0.
|
2023-07-12 14:29:03 +02:00 |
|
Ricardo Wurmus
|
5f8104b3a4
|
gnu: r-numbat: Update to 1.3.2-1.
* gnu/packages/bioconductor.scm (r-numbat): Update to 1.3.2-1.
|
2023-07-12 14:29:03 +02:00 |
|
Ricardo Wurmus
|
347e3b1b75
|
gnu: r-biomartr: Update to 1.0.4.
* gnu/packages/bioconductor.scm (r-biomartr): Update to 1.0.4.
|
2023-07-12 14:29:03 +02:00 |