415aa8a583
gnu: r-phangorn: Move to (gnu packages cran).
...
* gnu/packages/bioinformatics.scm (r-phangorn): Move from here...
* gnu/packages/cran.scm (r-phangorn): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:59:21 +02:00
f9c0b2e05a
gnu: r-seurat: Move to (gnu packages cran).
...
* gnu/packages/bioinformatics.scm (r-seurat): Move from here...
* gnu/packages/cran.scm (r-seurat): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:59:17 +02:00
b31c364467
gnu: r-maldiquant: Move to (gnu packages cran).
...
* gnu/packages/bioinformatics.scm (r-maldiquant): Move from here...
* gnu/packages/cran.scm (r-maldiquant): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:59:12 +02:00
30aaee3306
gnu: r-seqminer: Move to (gnu packages cran).
...
* gnu/packages/bioinformatics.scm (r-seqminer): Move from here...
* gnu/packages/cran.scm (r-seqminer): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:59:07 +02:00
66a8e62070
gnu: r-qtl2: Move to (gnu packages cran).
...
* gnu/packages/bioinformatics.scm (r-qtl2): Move from here...
* gnu/packages/cran.scm (r-qtl2): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:59:03 +02:00
496a52dc41
gnu: r-qtl: Move to (gnu packages cran).
...
* gnu/packages/bioinformatics.scm (r-qtl): Move from here...
* gnu/packages/cran.scm (r-qtl): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:58:58 +02:00
c23ff34423
gnu: r-igraph: Move to (gnu packages cran).
...
* gnu/packages/graph.scm (r-igraph): Move from here...
* gnu/packages/cran.scm (r-igraph): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:58:55 +02:00
1dc50e4190
gnu: r-diffusionmap: Move to (gnu packages cran).
...
* gnu/packages/graph.scm (r-diffusionmap): Move from here...
* gnu/packages/cran.scm (r-diffusionmap): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:58:49 +02:00
d3d38bd8f1
gnu: r-adaptivesparsity: Move to (gnu packages cran).
...
* gnu/packages/machine-learning.scm (r-adaptivesparsity): Move from here...
* gnu/packages/cran.scm (r-adaptivesparsity): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:48:38 +02:00
b17ace24ca
gnu: r-codedepends: Comment why it is in bioconductor.scm.
...
* gnu/packages/bioconductor.scm (r-codedepends): Add comment.
2020-09-11 21:46:51 +02:00
7e88ee9f02
gnu: Add r-fhtest.
...
* gnu/packages/bioconductor.scm (r-fhtest): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:33:02 +02:00
655c4bb25c
gnu: Add r-interval.
...
* gnu/packages/bioconductor.scm (r-interval): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:01:30 +02:00
962c7ceff5
gnu: Add r-perm.
...
* gnu/packages/cran.scm (r-perm): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 19:18:46 +02:00
4a13770003
gnu: Add r-mlecens.
...
* gnu/packages/cran.scm (r-mlecens): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 19:16:51 +02:00
488001eb3f
gnu: Add r-icens.
...
* gnu/packages/bioconductor.scm (r-icens): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 19:13:58 +02:00
19748ea380
gnu: r-tidymodels: Update to 0.1.1.
...
* gnu/packages/cran.scm (r-tidymodels): Update to 0.1.1.
[propagated-inputs]: Remove r-pillar, r-tidyposterior, r-tidypredict, and
r-tidytext; add r-modeldata and r-tidyr.
[native-inputs]: Add r-rmarkdown, pandoc, and pandoc-citeproc.
2020-09-11 19:06:47 +02:00
cecb700853
gnu: r-infer: Update to 0.5.3.
...
* gnu/packages/cran.scm (r-infer): Update to 0.5.3.
2020-09-11 19:06:47 +02:00
6edf558fd0
gnu: Add r-modeldata.
...
* gnu/packages/cran.scm (r-modeldata): New variable.
2020-09-11 19:06:47 +02:00
37e9a7fabf
gnu: r-parsnip: Update to 0.1.3.
...
* gnu/packages/cran.scm (r-parsnip): Update to 0.1.3.
2020-09-11 19:04:10 +02:00
f5d7f42ae2
gnu: r-tidytext: Update to 0.2.5.
...
* gnu/packages/cran.scm (r-tidytext): Update to 0.2.5.
[propagated-inputs]: Remove r-stopwords; add r-tibble.
2020-09-11 19:04:06 +02:00
0fa58b2488
gnu: r-tidypredict: Update to 0.4.6.
...
* gnu/packages/cran.scm (r-tidypredict): Update to 0.4.6.
2020-09-11 19:04:01 +02:00
471f0aacd2
gnu: r-tune: Update to 0.1.1.
...
* gnu/packages/cran.scm (r-tune): Update to 0.1.1.
[propagated-inputs]: Add r-vctrs.
2020-09-11 19:03:58 +02:00
dfa2cfeb3e
gnu: r-dials: Update to 0.0.8.
...
* gnu/packages/cran.scm (r-dials): Update to 0.0.8.
2020-09-11 19:03:54 +02:00
a1d7ec4893
gnu: r-yardstick: Update to 0.0.7.
...
* gnu/packages/cran.scm (r-yardstick): Update to 0.0.7.
[propagated-inputs]: Remove r-rcpp.
2020-09-11 19:03:51 +02:00
b0b24be7b7
gnu: r-workflows: Update to 0.1.3.
...
* gnu/packages/cran.scm (r-workflows): Update to 0.1.3.
2020-09-11 19:03:46 +02:00
820f415174
gnu: r-hardhat: Update to 0.1.4.
...
* gnu/packages/cran.scm (r-hardhat): Update to 0.1.4.
2020-09-11 19:03:43 +02:00
23bd6f6ef1
gnu: Add r-tidymodels.
...
* gnu/packages/cran.scm (r-tidymodels): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 18:29:49 +02:00
48d40c7717
gnu: Add r-infer.
...
* gnu/packages/cran.scm (r-infer): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 18:29:49 +02:00
35f033750f
gnu: Add r-parsnip.
...
* gnu/packages/cran.scm (r-parsnip): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 18:29:49 +02:00
8e79e3dd3d
gnu: Add r-tidytext.
...
* gnu/packages/cran.scm (r-tidytext): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 18:29:49 +02:00
39e6cac947
gnu: Add r-hunspell.
...
* gnu/packages/cran.scm (r-hunspell): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 18:29:49 +02:00
f90b4b380a
gnu: Add r-tokenizers.
...
* gnu/packages/cran.scm (r-tokenizers): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 18:29:49 +02:00
05bda85901
gnu: Add r-janeaustenr.
...
* gnu/packages/cran.scm (r-janeaustenr): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 18:29:48 +02:00
156c558866
gnu: Add r-tidypredict.
...
* gnu/packages/cran.scm (r-tidypredict): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 18:29:48 +02:00
3dbe8a57ec
gnu: Add r-tidyposterior.
...
* gnu/packages/cran.scm (r-tidyposterior): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 18:29:48 +02:00
e309e17f84
gnu: Add r-tune.
...
* gnu/packages/cran.scm (r-tune): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 18:29:48 +02:00
ca379399d2
gnu: Add r-dials.
...
* gnu/packages/cran.scm (r-dials): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 18:29:48 +02:00
26beaffa2d
gnu: Add r-dicedesign.
...
* gnu/packages/cran.scm (r-dicedesign): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 18:29:48 +02:00
fb76feaf7e
gnu: Add r-rsample.
...
* gnu/packages/cran.scm (r-rsample): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 18:29:48 +02:00
d1843fec10
gnu: Add r-yardstick.
...
* gnu/packages/cran.scm (r-yardstick): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 18:29:48 +02:00
c4e34dda85
gnu: Add r-gpfit.
...
* gnu/packages/cran.scm (r-gpfit): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 18:29:48 +02:00
ccf2d02a19
gnu: Add r-hardhat.
...
* gnu/packages/cran.scm (r-hardhat): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 18:29:48 +02:00
8d58b5b2a7
gnu: Add r-workflows.
...
* gnu/packages/cran.scm (r-workflows): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 18:29:46 +02:00
24e37fbbc4
gnu: Add reproc.
...
* gnu/packages/cpp.scm (reproc): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-09-11 17:53:59 +02:00
6dd8ffc574
daemon: Simplify interface with 'guix authenticate'.
...
There's no reason at this point to mimic the calling convention of the
'openssl' command.
* nix/libstore/local-store.cc (LocalStore::exportPath): Add only "sign"
and HASH to ARGS. Remove 'tmpDir' and 'hashFile'.
(LocalStore::importPath): Add only "verify" and SIGNATURE to
* guix/scripts/authenticate.scm (guix-authenticate): Adjust
accordingly; remove the OpenSSL-style clauses.
(read-hash-data): Remove.
(sign-with-key): Replace 'port' with 'sha256' and adjust accordingly.
(validate-signature): Export SIGNATURE to be a canonical sexp.
* tests/guix-authenticate.sh: Adjust tests accordingly.
2020-09-11 17:53:58 +02:00
7a68d3ccad
doc: Distinguish the "nar bundle" format from "nar".
...
* doc/guix.texi (Invoking guix archive): Introduce the term "nar bundle"
and clarify what the output of "guix archive --export" really is.
* guix/nar.scm (restore-one-item, restore-file-set): Use the term "nar
bundle" in docstrings.
2020-09-11 17:53:58 +02:00
6310283bae
store: Test 'import-paths' with unauthorized and unsigned nar bundles.
...
* tests/store.scm ("import not signed")
("import signed by unauthorized key"): New tests.
2020-09-11 17:53:58 +02:00
58833aec3f
gnu: hangups: Update to 0.4.11.
...
* gnu/packages/messaging.scm (hangups): Update to 0.4.11.
2020-09-11 16:28:04 +02:00
436185b96e
gnu: samplv1: Update to 0.9.17.
...
* gnu/packages/music.scm (samplv1): Update to 0.9.17.
2020-09-11 16:28:03 +02:00
418024cad5
gnu: drumkv1: Update to 0.9.17.
...
* gnu/packages/music.scm (drumkv1): Update to 0.9.17.
2020-09-11 16:28:03 +02:00
zimoun
Peter Lo
Ricardo Wurmus
Alexandros Theodotou
Ludovic Courtès
Tobias Geerinckx-Rice