Using PYTHONPATH as a mean to discover the Python packages had the following
issues:
1. It is not versioned, so different versions of Python would clash if
installed in a shared profile.
2. It would interfere with the host Python site on foreign
distributions, sometimes preventing a a user to login their GDM
session (!).
3. It would take precedence over user installed Python packages
installed through pip.
4. It would leak into Python virtualenvs, which are supposed to create
isolated Python environments.
This changes fixes the above issues by making use of a sitecustomize.py
module. The newly introduced GUIX_PYTHONPATH environment variable is read
from the environment, filtered for the current Python version of the
interpreter, and spliced in 'sys.path' just before Python's own site location,
which provides the expected behavior.
* gnu/packages/aux-files/python/sitecustomize.py: New file.
* Makefile.am: Register it.
* gnu/packages/python.scm (customize-site)
(guix-pythonpath-search-path): New procedures.
(python-2.7)[phases]{install-sitecustomize.py}: New phase.
[native-inputs]{sitecustomize.py}: New input.
[native-search-paths]: Replace PYTHONPATH with GUIX_PYTHONPATH.
(python-3.9)[native-search-paths]: Likewise.
[phases]{install-sitecustomize}: Override with correct version.
[native-search-paths]: Replace PYTHONPATH with GUIX_PYTHONPATH.
* gnu/packages/commencement.scm (python-boot0):
[phases]{install-sitecustomize}: Likewise.
[native-inputs]{sitecustomize.py}: New input.
[native-search-paths]: Replace PYTHONPATH with GUIX_PYTHONPATH.
* guix/build/python-build-system.scm (site-packages): Do not add a trailing
'/'.
squash! gnu: python: Replace PYTHONPATH by GUIX_PYTHONPATH.
This allows 'gcc-toolchain' to be used as a drop-in replacement for the
default tool chain through '--with-toolchain=gcc-toolchain'.
* gnu/packages/commencement.scm (make-gcc-toolchain)[native-search-paths]
[search-paths]: Append LIBC's search paths.
Fixes <https://bugs.gnu.org/43508>.
* gnu/packages/commencement.scm (gcc-mesboot)[native-inputs]: Remove
GCC-MESBOOT1, which is already in %BOOT-MESBOOT4-INPUTS.
Fixes <https://bugs.gnu.org/43005>.
Reported by Vagrant Cascadian <vagrant@debian.org>.
* gnu/packages/commencement.scm (bash-mesboot0)[arguments]: Break store file
name in comment and add unquoted string-append to silence the
’assert-no-store-file-names’ check. The store file name check is really meant
for code; this file name was unfortunately used is a comment.
As the comment explains, this is only necessary when building with
--enable-obsolete-rpc, which we aren't using anymore.
* gnu/packages/commencement.scm
(glibc-final-with-bootstrap-bash)[inputs]: Remove native-gcc.
* gnu/packages/commencement.scm
(glibc-final-with-bootstrap-bash)[arguments]: Don't patch sunrpc,
as it's no longer required. Tweak C_INCLUDE_PATH and
CPLUS_INCLUDE_PATH instead of CPATH.
With this change, the closure of "gcc-toolchain:out" goes from 1 GiB to
393 MiB, which was the intention.
* gnu/packages/commencement.scm (make-gcc-toolchain): Filter out
"libc-debug" and "libc-static" from OUT.
Unlike during a non-chroot'ed build on Debian/Hurd, there is no /usr/include.
* gnu/packages/commencement.scm (python-boot0)[arguments]: When building on
the Hurd, add `fix-regen' stage to correct a reference to "/usr".
Previous, things like 'ld-wrapper-boot0' would be memoized with
(mlambda () …). However, the definition of 'ld-wrapper-boot0' depends
on the result of (%boot0-inputs), which is itself a function
of (%current-system). Thus, if one first calls:
(parameterize ((%current-system "x86_64-linux"))
(ld-wrapper-boot0))
then, in all subsequent calls to 'ld-wrapper-boot0', the value
of (%current-system) would be ignored because the result is already
memoized. Concretely, 'ld-wrapper-boot0' would always have the
dependencies it has on x86_64-linux, even though they are different than
those on armhf-linux, say ("bash-mesboot" vs. "bootstrap-binaries").
Fixes <https://bugs.gnu.org/40482>.
Reported by Marius Bakke <mbakke@fastmail.com>.
* gnu/packages/commencement.scm (define/system-dependent): New macro.
(linux-libre-headers-boot0, hurd-core-headers-boot0, ld-wrapper-boot0)
(gcc-boot0-intermediate-wrapped, gcc-boot0-wrapped, ld-wrapper-boot3):
Define using 'define/system-dependent' instead of 'define' + 'mlambda'.
Adjust users so they no longer look like procedure calls.
* tests/guix-build.sh: Add test.
This follows up 67ca82e6dd which was ineffective
when running 'guix build --system=armhf-linux python' on e.g. x86_64-linux
because the conditional would always return the native system.
* gnu/packages/python.scm (python-3.8)[native-inputs]: Add "arm-alignment.patch".
[arguments]: Add phase to apply it.
[source](patches): Remove it.
* gnu/packages/commencement.scm (python-boot0): Prevent inheriting the phase.
This removes 2 'add-data-to-store-cache' lookups.
* gnu/packages/commencement.scm (flex-boot0): Move (package (inherit …))
outside the 'propagated-inputs' field to avoid creating a new node each
time the field is accessed.
This fixes a test failure in tests/graph.scm because the package does not use
glibc, yet is part of the public packages.
* gnu/packages/commencement.scm (coreutils-mesboot): Use DEFINE instead of
DEFINE-PUBLIC.
The 'hurd-minimal' package (via hurd-headers) now uses a git checkout and
added dependencies on autoconf, automake and teiinfo to build. Using those in
commencement creates a bootstrap loop. So, revert to a tarball release.
* gnu/packages/commencement.scm (hurd-minimal-boot0): Build from tarball;
remove autoconf, automake, texinfo bootstrap dependencies.
The 'hurd-headers' package now uses a git checkout and added dependencies on
autoconf and automake to build. Using those in commencement creates a
bootstrap loop. So, revert to a tarball release.
* gnu/packages/commencement.scm (hurd-version-boot0, hurd-source-boot0): New
variable.
(hurd-headers-boot0): Use it to build from tarball; remove autoconf, automake,
texinfo bootstrap dependencies.
The 'gnumach-headers' package now uses a git checkout and added dependencies
on autoconf, automake and texinfo to build. Using those in commencement
creates a bootstrap loop. So, revert to a tarball release.
* gnu/packages/commencement.scm (gnumach-headers-boot0): Build from tarball;
remove autoconf, automake, texinfo bootstrap dependencies.
This patch changes three things:
1. package derivations are built using Guile 3.0;
2. 'gexp->derivation' defaults to Guile 3.0;
3. "guile3.0-" packages are deprecated aliases for the regular
package, which now depends on Guile 3.0; "guile2.2-" packages are
introduced; "guile-next" is renamed to "guile".
* gnu/packages/guile.scm (guile-2.0/fixed): Remove.
(guile-3.0/fixed): New variable.
(package-for-guile-3.0): Remove.
(package-for-guile-2.2): New variable.
(define-deprecated-guile3.0-package): New macro.
(guile-3.0)[name]: Change to "guile".
(guile-json-3)[native-inputs, inputs]: New fields.
(guile2.2-json): New variable.
(guile3.0-json): Deprecate.
(guile-gdbm-ffi)[native-inputs]: Switch to GUILE-3.0.
(guile2.2-gdbm-ffi): New variable.
(guile3.0-gdbm-ffi): Deprecate.
(guile-sqlite3): Switch to GUILE-3.0.
(guile2.2-sqlite3): New variable.
(guile3.0-sqlite3): Deprecate.
(guile-bytestructures): Switch to GUILE-3.0.
(guile2.2-bytestructures): New variable.
(guile3.0-bytestructures): Deprecate.
(guile-git): Switch to GUILE-3.0.
(guile2.2-git): New variable.
(guile3.0-git): Deprecate.
(guile-2.2/bug-fix):
* gnu/packages/ci.scm (cuirass): Switch to GUILE-3.0.
* gnu/packages/emacs-xyz.scm (emacs-guix): Switch to GUILE-3.0.
* gnu/packages/gtk.scm (guile-cairo)[arguments]: New field.
Switch to GUILE-3.0.
(guile2.2-cairo): New variable.
(guile3.0-cairo): Deprecate.
(guile-rsvg): Switch to GUILE-3.0.
(guile2.2-cairo): New variable.
(guile3.0-cairo): Deprecate.
(guile-present): Switch to GUILE-3.0.
(guile2.2-present): New variable.
(guile3.0-present): Deprecate.
(guile-gnome)[propagated-inputs]: Use GUILE2.2-CAIRO and GUILE2.2-LIB.
* gnu/packages/guile-xyz.scm (guile-fibers)[arguments]: Add #:configure-flags.
Switch to GUILE-3.0.
(guile2.2-fibers): New variable.
(guile3.0-fibers): Deprecate.
(guile-syntax-highlight): Switch to GUILE-3.0.
(guile2.2-syntax-highlight): New variable.
(guile3.0-syntax-highlight): Deprecate.
(guile-colorized): Switch to GUILE-3.0.
(guile2.2-colorized): New variable.
(guile3.0-colorized): Deprecate.
(guile-pfds): Switch to GUILE-3.0.
(guile2.2-pfds): New variable.
(guile3.0-pfds): Deprecate.
(guile-simple-zmq): Switch to GUILE-3.0.
(guile2.2-simple-zmq): New variable.
(guile3.0-simple-zmq): Deprecate.
(guile-newt): Switch to GUILE-3.0.
(guile2.2-newt): New variable.
(guile3.0-newt): Deprecate.
(guile-parted): Switch to GUILE-3.0.
(guile2.2-parted): New variable.
(guile3.0-parted): Deprecate.
(guile-config): Switch to GUILE-3.0.
(guile2.2-config): New variable.
(guile3.0-config): Deprecate.
(guile-hall): Switch to GUILE-3.0.
(guile2.2-hall): New variable.
(guile3.0-hall): Deprecate.
(guile-ics): Switch to GUILE-3.0.
(guile2.2-ics): New variable.
(guile3.0-ics): Deprecate.
(guile-wisp)[arguments]: Add 'support-guile-3.0' phase.
Switch to GUILE-3.0.
(guile2.2-wisp): New variable.
(guile3.0-wisp): Deprecate.
(guile-lib): Switch to GUILE-3.0.
(guile2.2-lib): New variable.
(guile3.0-lib): Deprecate.
(guile-minikanren): Switch to GUILE-3.0.
(guile2.2-minikanren): New variable.
(guile3.0-minikanren): Deprecate.
(guile-irregex): Switch to GUILE-3.0.
(guile2.2-irregex): New variable.
(guile3.0-irregex): Deprecate.
(haunt): Switch to GUILE-3.0, and remove GUILE-READER.
(guile2.2-haunt): New variable.
(guile3.0-haunt): Deprecate.
(guile-commonmark): Switch to GUILE-3.0.
(guile2.2-commonmark): New variable.
(guile3.0-commonmark): Deprecate.
(mcron): Switch to GUILE-3.0.
(guile2.0-mcron): New variable.
(guile3.0-mcron): Deprecate.
(guile-picture-language): Switch to GUILE-3.0.
(guile2.2-picture-language): New variable.
(guile3.0-picture-language): Deprecate.
(guile-gi): Switch to GUILE-3.0.
(guile2.2-gi): New variable.
(guile3.0-gi): Deprecate.
(guile-hashing): Switch to GUILE-3.0.
(guile2.2-hashing): New variable.
(guile3.0-hashing): Deprecate.
* gnu/packages/package-management.scm (guix): Switch to GUILE-3.0.
(guile2.2-guix): New variable.
(guile3.0-guix): Deprecate.
(gwl): Replace "guile3.0-" with "guile-".
(guix-jupyter)[source]: Adjust for Guile 3.0.
Switch to GUILE-3.0.
* gnu/packages/ssh.scm (guile-ssh): Switch to GUILE-3.0.
(guile2.2-ssh): New variable.
(guile3.0-ssh): Deprecate.
* gnu/packages/admin.scm (shepherd): Switch to GUILE-3.0.
(guile2.2-shepherd): New variable.
(guile3.0-shepherd): Deprecate.
* gnu/packages/mail.scm (mailutils): Switch to GUILE-3.0.
(guile2.2-mailutils): New variable.
(guile3.0-mailutils): Deprecate.
* gnu/packages/plotutils.scm (guile-charting): Switch to GUILE-3.0.
(guile2.2-charting): New variable.
(guile3.0-charting): Deprecate.
* gnu/packages/version-control.scm (libgit2): Switch to GUILE-3.0.
* gnu/packages/vpn.scm (vpnc-scripts): Switch to GUILE-3.0.
* gnu/packages/web.scm (guix-data-service): Switch to GUILE-3.0.
(hpcguix-web): Switch to GUILE-3.0.
* guix/self.scm (specification->package): Refer to the "guile-" variants
instead of "guile3.0-".
* guix/gexp.scm (default-guile): Change to GUILE-3.0.
* build-aux/build-self.scm (build): #:guile-version defaults to "3.0".
* gnu/packages/commencement.scm (guile-final): Base on GUILE-3.0/FIXED.
* gnu/packages/commencement.scm (gash-boot): When configuring, use the
version of the Gash package instead the version of Guile!
(gash-utils-boot): Likewise, but for Gash-Utils.
* gnu/packages/commencement.scm (%boot-mesboot1-inputs): In the list
of elements to delete from '%boot-mesboot0-inputs', remove a
duplicate 'bash', add 'bootar', and remove an extra space at the end
of 'grep'.
Maxim Cournoyer
Efraim Flashner
Ludovic Courtès
Christopher Baines
dftxbs3e
Vagrant Cascadian
Jan (janneke) Nieuwenhuizen
zimoun
Jakub Kądziołka
guy fleury iteriteka
Marius Bakke
Timothy Sample