Ricardo Wurmus
|
6652f72e13
|
gnu: r-matrixgenerics: Update to 1.12.2.
* gnu/packages/bioconductor.scm (r-matrixgenerics): Update to 1.12.2.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
1b83659902
|
gnu: r-systempiper: Update to 2.6.3.
* gnu/packages/bioconductor.scm (r-systempiper): Update to 2.6.3.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
0a0304ef3a
|
gnu: r-summarizedexperiment: Update to 1.30.2.
* gnu/packages/bioconductor.scm (r-summarizedexperiment): Update to 1.30.2.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
464ad1fd79
|
gnu: r-maaslin2: Update to 1.14.1.
* gnu/packages/bioconductor.scm (r-maaslin2): Update to 1.14.1.
[propagated-inputs]: Remove r-lpsymphony; add r-tibble.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
5588562fb9
|
gnu: r-limma: Update to 3.56.2.
* gnu/packages/bioconductor.scm (r-limma): Update to 3.56.2.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
5db8d3e600
|
gnu: r-lfa: Update to 2.0.11.
* gnu/packages/bioconductor.scm (r-lfa): Update to 2.0.11.
[propagated-inputs]: Add r-rspectra.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
3193a2a04d
|
gnu: r-genomicfeatures: Update to 1.52.1.
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.52.1.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
2b62bc3f67
|
gnu: r-deseq2: Update to 1.40.2.
* gnu/packages/bioconductor.scm (r-deseq2): Update to 1.40.2.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
6604189891
|
gnu: r-biomart: Update to 2.56.1.
* gnu/packages/bioconductor.scm (r-biomart): Update to 2.56.1.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
1f0633db11
|
gnu: r-annotationforge: Update to 1.42.2.
* gnu/packages/bioconductor.scm (r-annotationforge): Update to 1.42.2.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
c397d6a5e1
|
gnu: r-genomeinfodb: Update to 1.36.1.
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.36.1.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
3c201e1aab
|
gnu: r-annotationdbi: Update to 1.62.2.
* gnu/packages/bioconductor.scm (r-annotationdbi): Update to 1.62.2.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
565d84170a
|
gnu: r-affy: Update to 1.78.1.
* gnu/packages/bioconductor.scm (r-affy): Update to 1.78.1.
|
2023-07-12 14:29:10 +02:00 |
|
Ricardo Wurmus
|
a9d140996c
|
gnu: r-isoformswitchanalyzer: Update to 2.0.1.
* gnu/packages/bioconductor.scm (r-isoformswitchanalyzer): Update to 2.0.1.
[propagated-inputs]: Remove r-drimseq; add r-biocparallel, r-pfamanalyzer, r-s4vectors,
r-saturn, r-summarizedexperiment, r-sva, and r-tidyr.
|
2023-07-12 14:29:09 +02:00 |
|
Ricardo Wurmus
|
b864a5956f
|
gnu: r-iranges: Update to 2.34.1.
* gnu/packages/bioconductor.scm (r-iranges): Update to 2.34.1.
|
2023-07-12 14:29:09 +02:00 |
|
Ricardo Wurmus
|
5eaf9f6b83
|
gnu: r-delayedarray: Update to 0.26.6.
* gnu/packages/bioconductor.scm (r-delayedarray): Update to 0.26.6.
|
2023-07-12 14:29:09 +02:00 |
|
Ricardo Wurmus
|
6e83dee12a
|
gnu: r-bambu: Update to 3.2.5.
* gnu/packages/bioconductor.scm (r-bambu): Update to 3.2.5.
|
2023-07-12 14:29:09 +02:00 |
|
Ricardo Wurmus
|
f0c82ddced
|
gnu: r-alevinqc: Update to 1.16.1.
* gnu/packages/bioconductor.scm (r-alevinqc): Update to 1.16.1.
|
2023-07-12 14:29:09 +02:00 |
|
Ricardo Wurmus
|
4db85c197b
|
gnu: r-ancombc: Update to 2.2.1.
* gnu/packages/bioconductor.scm (r-ancombc): Update to 2.2.1.
[propagated-inputs]: Remove r-dplyr, r-emmeans, r-magrittr, r-rlang, r-rngtools,
r-tibble, and r-tidyr; add r-gtools, r-matrix, and r-multcomp.
|
2023-07-12 14:29:09 +02:00 |
|
Ricardo Wurmus
|
558637533f
|
gnu: r-gdsfmt: Update to 1.36.1.
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.36.1.
[properties]: Tell updater to leave the extra inputs be.
|
2023-07-12 14:29:09 +02:00 |
|
Ricardo Wurmus
|
b4cafa71ae
|
gnu: Add r-saturn.
* gnu/packages/bioconductor.scm (r-saturn): New variable.
|
2023-07-12 14:29:09 +02:00 |
|
Ricardo Wurmus
|
990bac0ea5
|
gnu: Add r-pfamanalyzer.
* gnu/packages/bioconductor.scm (r-pfamanalyzer): New variable.
|
2023-07-12 14:29:09 +02:00 |
|
Ricardo Wurmus
|
b10bff65be
|
gnu: r-mzr: Update to 2.34.1.
* gnu/packages/bioconductor.scm (r-mzr): Update to 2.34.1.
[properties]: Tell updater to not remove the "boost" input.
|
2023-07-12 14:29:09 +02:00 |
|
Ricardo Wurmus
|
bb570c1534
|
gnu: r-ggpicrust2: Update to 1.7.1.
* gnu/packages/bioconductor.scm (r-ggpicrust2): Update to 1.7.1.
[propagated-inputs]: Remove r-phyloseq; add r-ggh4x.
|
2023-07-12 14:29:03 +02:00 |
|
Ricardo Wurmus
|
d669b30658
|
gnu: r-scistreer: Update to 1.2.0.
* gnu/packages/bioconductor.scm (r-scistreer): Update to 1.2.0.
|
2023-07-12 14:29:03 +02:00 |
|
Ricardo Wurmus
|
5f8104b3a4
|
gnu: r-numbat: Update to 1.3.2-1.
* gnu/packages/bioconductor.scm (r-numbat): Update to 1.3.2-1.
|
2023-07-12 14:29:03 +02:00 |
|
Ricardo Wurmus
|
347e3b1b75
|
gnu: r-biomartr: Update to 1.0.4.
* gnu/packages/bioconductor.scm (r-biomartr): Update to 1.0.4.
|
2023-07-12 14:29:03 +02:00 |
|
Navid Afkhami
|
11651fbf7f
|
gnu: Add r-cellid.
* gnu/packages/bioconductor.scm (r-cellid): New variable.
|
2023-07-03 09:58:57 +02:00 |
|
Ricardo Wurmus
|
a8ac423090
|
gnu: r-ggpicrust2: Update to 1.7.0.
* gnu/packages/bioconductor.scm (r-ggpicrust2): Update to 1.7.0.
[propagated-inputs]: Add r-circlize.
[native-inputs]: Add r-knitr.
|
2023-06-03 08:32:01 +02:00 |
|
Ricardo Wurmus
|
41b6f213c1
|
gnu: r-tcgabiolinks: Update to 2.28.2.
* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.28.2.
|
2023-06-02 12:53:15 +02:00 |
|
Ricardo Wurmus
|
6d194c1ba8
|
gnu: r-biocthis: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-biocthis): Update to 1.10.1.
|
2023-06-02 12:53:15 +02:00 |
|
Ricardo Wurmus
|
302b916b2b
|
gnu: r-basilisk-utils: Update to 1.12.1.
* gnu/packages/bioconductor.scm (r-basilisk-utils): Update to 1.12.1.
|
2023-06-02 12:53:15 +02:00 |
|
Ricardo Wurmus
|
6d54b5cc23
|
gnu: r-megadepth: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-megadepth): Update to 1.10.0.
|
2023-06-02 12:53:15 +02:00 |
|
Ricardo Wurmus
|
0beada7cb0
|
gnu: r-s4arrays: Update to 1.0.4.
* gnu/packages/bioconductor.scm (r-s4arrays): Update to 1.0.4.
|
2023-06-02 12:53:15 +02:00 |
|
Ricardo Wurmus
|
f06bd3e740
|
gnu: r-biocviews: Update to 1.68.1.
* gnu/packages/bioconductor.scm (r-biocviews): Update to 1.68.1.
|
2023-06-02 12:53:15 +02:00 |
|
Ricardo Wurmus
|
438d2b80f7
|
gnu: r-rsubread: Update to 2.14.2.
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.14.2.
|
2023-06-02 12:53:15 +02:00 |
|
Ricardo Wurmus
|
08e1e36942
|
gnu: r-treeio: Update to 1.24.1.
* gnu/packages/bioconductor.scm (r-treeio): Update to 1.24.1.
|
2023-06-02 12:53:14 +02:00 |
|
Ricardo Wurmus
|
93350d89a2
|
gnu: r-apeglm: Update to 1.22.1.
* gnu/packages/bioconductor.scm (r-apeglm): Update to 1.22.1.
|
2023-06-02 12:53:14 +02:00 |
|
Ricardo Wurmus
|
e6faedd0c9
|
gnu: r-zellkonverter: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-zellkonverter): Update to 1.10.1.
|
2023-06-02 12:53:14 +02:00 |
|
Ricardo Wurmus
|
071c31583b
|
gnu: r-scmap: Update to 1.22.3.
* gnu/packages/bioconductor.scm (r-scmap): Update to 1.22.3.
|
2023-06-02 12:53:14 +02:00 |
|
Ricardo Wurmus
|
2a35673351
|
gnu: r-limma: Update to 3.56.1.
* gnu/packages/bioconductor.scm (r-limma): Update to 3.56.1.
|
2023-06-02 12:53:14 +02:00 |
|
Ricardo Wurmus
|
21342c3bcf
|
gnu: r-edger: Update to 3.42.4.
* gnu/packages/bioconductor.scm (r-edger): Update to 3.42.4.
|
2023-06-02 12:53:14 +02:00 |
|
Ricardo Wurmus
|
15ffd4014e
|
gnu: r-biostrings: Update to 2.68.1.
* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.68.1.
|
2023-06-02 12:53:14 +02:00 |
|
Ricardo Wurmus
|
9e9e21dc46
|
gnu: r-biocparallel: Update to 1.34.2.
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.34.2.
|
2023-06-02 12:53:14 +02:00 |
|
Ricardo Wurmus
|
6693480b46
|
gnu: r-densvis: Update to 1.10.2.
* gnu/packages/bioconductor.scm (r-densvis): Update to 1.10.2.
|
2023-06-02 12:53:14 +02:00 |
|
Ricardo Wurmus
|
3b20a9e600
|
gnu: r-delayedarray: Update to 0.26.3.
* gnu/packages/bioconductor.scm (r-delayedarray): Update to 0.26.3.
|
2023-06-02 12:53:14 +02:00 |
|
Ricardo Wurmus
|
f947aa3ac9
|
gnu: r-dearseq: Update to 1.12.1.
* gnu/packages/bioconductor.scm (r-dearseq): Update to 1.12.1.
|
2023-06-02 12:53:14 +02:00 |
|
Ricardo Wurmus
|
ca0c012d4a
|
gnu: r-bambu: Update to 3.2.3.
* gnu/packages/bioconductor.scm (r-bambu): Update to 3.2.3.
|
2023-06-02 12:53:14 +02:00 |
|
Ricardo Wurmus
|
83bd8d51c3
|
gnu: r-alpine: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-alpine): Update to 1.26.0.
|
2023-06-02 12:53:13 +02:00 |
|
Ricardo Wurmus
|
f4639380ae
|
gnu: r-anvil: Update to 1.12.3.
* gnu/packages/bioconductor.scm (r-anvil): Update to 1.12.3.
|
2023-06-02 12:53:13 +02:00 |
|