208 lines
7.0 KiB
Scheme
208 lines
7.0 KiB
Scheme
;;; GNU Guix --- Functional package management for GNU
|
|
;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
|
|
;;; Copyright © 2017 Ricardo Wurmus <rekado@elephly.net>
|
|
;;; Copyright © 2017 ng0 <ng0@n0.is>
|
|
;;; Copyright © 2017 Julien Lepiller <julien@lepiller.eu>
|
|
;;; Copyright © 2018, 2019 Efraim Flashner <efraim@flashner.co.il>
|
|
;;;
|
|
;;; This file is part of GNU Guix.
|
|
;;;
|
|
;;; GNU Guix is free software; you can redistribute it and/or modify it
|
|
;;; under the terms of the GNU General Public License as published by
|
|
;;; the Free Software Foundation; either version 3 of the License, or (at
|
|
;;; your option) any later version.
|
|
;;;
|
|
;;; GNU Guix is distributed in the hope that it will be useful, but
|
|
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
|
|
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
|
;;; GNU General Public License for more details.
|
|
;;;
|
|
;;; You should have received a copy of the GNU General Public License
|
|
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
|
|
|
|
(define-module (gnu packages python-compression)
|
|
#:use-module ((guix licenses) #:prefix license:)
|
|
#:use-module (guix utils)
|
|
#:use-module (guix packages)
|
|
#:use-module (guix download)
|
|
#:use-module (guix build-system gnu)
|
|
#:use-module (guix build-system python)
|
|
#:use-module (gnu packages)
|
|
#:use-module (gnu packages compression)
|
|
#:use-module (gnu packages check)
|
|
#:use-module (gnu packages maths)
|
|
#:use-module (gnu packages python)
|
|
#:use-module (gnu packages python-xyz))
|
|
|
|
(define-public python-lzo
|
|
(package
|
|
(name "python-lzo")
|
|
(version "1.12")
|
|
(source
|
|
(origin
|
|
(method url-fetch)
|
|
(uri (pypi-uri "python-lzo" version))
|
|
(sha256
|
|
(base32
|
|
"0iakqgd51n1cd7r3lpdylm2rgbmd16y74cra9kcapwg84mlf9a4p"))))
|
|
(build-system python-build-system)
|
|
(arguments
|
|
`(#:test-target "check"
|
|
#:phases
|
|
(modify-phases %standard-phases
|
|
(add-after 'unpack 'patch-setuppy
|
|
(lambda _
|
|
(substitute* "setup.py"
|
|
(("include_dirs.append\\(.*\\)")
|
|
(string-append "include_dirs.append('"
|
|
(assoc-ref %build-inputs "lzo")
|
|
"/include/lzo"
|
|
"')")))
|
|
#t)))))
|
|
(inputs
|
|
`(("lzo" ,lzo)))
|
|
(home-page "https://github.com/jd-boyd/python-lzo")
|
|
(synopsis "Python bindings for the LZO data compression library")
|
|
(description
|
|
"Python-LZO provides Python bindings for LZO, i.e. you can access
|
|
the LZO library from your Python scripts thereby compressing ordinary
|
|
Python strings.")
|
|
(license license:gpl2+)))
|
|
|
|
(define-public python2-lzo
|
|
(package-with-python2 python-lzo))
|
|
|
|
(define-public python-lz4
|
|
(package
|
|
(name "python-lz4")
|
|
(version "0.10.1")
|
|
(source
|
|
(origin
|
|
(method url-fetch)
|
|
(uri (pypi-uri "lz4" version))
|
|
(sha256
|
|
(base32
|
|
"0ghv1xbaq693kgww1x9c22bplz479ls9szjsaa4ig778ls834hm0"))))
|
|
(build-system python-build-system)
|
|
(native-inputs
|
|
`(("python-nose" ,python-nose)
|
|
("python-setuptools-scm" ,python-setuptools-scm)))
|
|
(home-page "https://github.com/python-lz4/python-lz4")
|
|
(synopsis "LZ4 bindings for Python")
|
|
(description
|
|
"This package provides python bindings for the lz4 compression library
|
|
by Yann Collet. The project contains bindings for the LZ4 block format and
|
|
the LZ4 frame format.")
|
|
(license license:bsd-3)))
|
|
|
|
(define-public python2-lz4
|
|
(package-with-python2 python-lz4))
|
|
|
|
(define-public python-lzstring
|
|
(package
|
|
(name "python-lzstring")
|
|
(version "1.0.4")
|
|
(source
|
|
(origin
|
|
(method url-fetch)
|
|
(uri (pypi-uri "lzstring" version))
|
|
(sha256
|
|
(base32
|
|
"18ly9pppy2yspxzw7k1b23wk77k7m44rz2g0271bqgqrk3jn3yhs"))))
|
|
(build-system python-build-system)
|
|
(propagated-inputs
|
|
`(("python-future" ,python-future)))
|
|
(home-page "https://github.com/gkovacs/lz-string-python")
|
|
(synopsis "String compression")
|
|
(description "Lz-string is a string compressor library for Python.")
|
|
(license license:expat)))
|
|
|
|
(define-public python2-lzstring
|
|
(package-with-python2 python-lzstring))
|
|
|
|
(define-public bitshuffle
|
|
(package
|
|
(name "bitshuffle")
|
|
(version "0.3.5")
|
|
(source (origin
|
|
(method url-fetch)
|
|
(uri (pypi-uri "bitshuffle" version))
|
|
(sha256
|
|
(base32
|
|
"1823x61kyax4dc2hjmc1xraskxi1193y8lvxd03vqv029jrj8cjy"))
|
|
(modules '((guix build utils)))
|
|
(snippet
|
|
'(begin
|
|
;; Remove generated Cython files.
|
|
(delete-file "bitshuffle/h5.c")
|
|
(delete-file "bitshuffle/ext.c")
|
|
#t))))
|
|
(build-system python-build-system)
|
|
(arguments
|
|
`(#:tests? #f ; fail: https://github.com/h5py/h5py/issues/769
|
|
#:phases
|
|
(modify-phases %standard-phases
|
|
(add-after 'unpack 'fix-neon-detection
|
|
;; Neon is only for aarch64 ATM
|
|
;; see: https://github.com/kiyo-masui/bitshuffle/pull/73
|
|
(lambda _
|
|
(substitute* "src/bitshuffle_core.c"
|
|
(("#define USEARMNEON")
|
|
"#ifdef __aarch64__\n#define USEARMNEON\n#endif"))
|
|
#t))
|
|
(add-after 'unpack 'dont-build-native
|
|
(lambda _
|
|
(substitute* "setup.py"
|
|
(("'-march=native', ") ""))
|
|
#t)))))
|
|
(inputs
|
|
`(("numpy" ,python-numpy)
|
|
("h5py" ,python-h5py)
|
|
("hdf5" ,hdf5)))
|
|
(native-inputs
|
|
`(("cython" ,python-cython)))
|
|
(home-page "https://github.com/kiyo-masui/bitshuffle")
|
|
(synopsis "Filter for improving compression of typed binary data")
|
|
(description "Bitshuffle is an algorithm that rearranges typed, binary data
|
|
for improving compression, as well as a python/C package that implements this
|
|
algorithm within the Numpy framework.")
|
|
(license license:expat)))
|
|
|
|
(define-public bitshuffle-for-snappy
|
|
(package
|
|
(inherit bitshuffle)
|
|
(name "bitshuffle-for-snappy")
|
|
(build-system gnu-build-system)
|
|
(arguments
|
|
(substitute-keyword-arguments (package-arguments bitshuffle)
|
|
((#:tests? _ #f) #f)
|
|
((#:phases phases)
|
|
`(modify-phases %standard-phases
|
|
(replace 'configure
|
|
(lambda* (#:key outputs #:allow-other-keys)
|
|
(with-output-to-file "Makefile"
|
|
(lambda _
|
|
(format #t "\
|
|
libbitshuffle.so: src/bitshuffle.o src/bitshuffle_core.o src/iochain.o lz4/lz4.o
|
|
\tgcc -O3 -ffast-math -std=c99 -o $@ -shared -fPIC $^
|
|
|
|
%.o: %.c
|
|
\tgcc -O3 -ffast-math -std=c99 -fPIC -Isrc -Ilz4 -c $< -o $@
|
|
|
|
PREFIX:=~a
|
|
LIBDIR:=$(PREFIX)/lib
|
|
INCLUDEDIR:=$(PREFIX)/include
|
|
|
|
install: libbitshuffle.so
|
|
\tinstall -dm755 $(LIBDIR)
|
|
\tinstall -dm755 $(INCLUDEDIR)
|
|
\tinstall -m755 libbitshuffle.so $(LIBDIR)
|
|
\tinstall -m644 src/bitshuffle.h $(INCLUDEDIR)
|
|
\tinstall -m644 src/bitshuffle_core.h $(INCLUDEDIR)
|
|
\tinstall -m644 src/iochain.h $(INCLUDEDIR)
|
|
\tinstall -m644 lz4/lz4.h $(INCLUDEDIR)
|
|
" (assoc-ref outputs "out"))))
|
|
#t))))))
|
|
(inputs '())
|
|
(native-inputs '())))
|