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guix/gnu/packages
Ricardo Wurmus 2ab52103c9
gnu: r-xcms: Update to 4.0.1.
* gnu/packages/bioconductor.scm (r-xcms): Update to 4.0.1.

Change-Id: I98dd730bb959d2483164177a3e534915d13fee44
2023-12-15 17:47:40 +01:00
..
aux-files
patches gnu: racket: Update to 8.11.1. 2023-12-13 12:58:43 +01:00
abduco.scm
abiword.scm
accessibility.scm
acct.scm
acl.scm
ada.scm
admin.scm
adns.scm
agda.scm
aidc.scm
algebra.scm gnu: fftw: Update to 3.3.10 2023-11-26 14:49:00 +01:00
android.scm
animation.scm
anthy.scm
antivirus.scm
apl.scm
apparmor.scm
apple.scm
apr.scm
arcan.scm
aspell.scm gnu: Update ispell to 3.4.06. 2023-11-23 14:21:06 +00:00
assembly.scm
astronomy.scm
attr.scm
audio.scm gnu: qpwgraph: Update to 0.6.0. 2023-11-26 14:48:55 +01:00
augeas.scm
authentication.scm
autogen.scm
autotools.scm
avahi.scm
avr-xyz.scm
avr.scm
axoloti.scm
backup.scm gnu: duplicity: Remove input labels and use gexps. 2023-11-22 16:51:46 +01:00
barrier.scm
base.scm gnu: commencement: Use locales for the right libc version on GNU/Hurd. 2023-11-25 16:29:25 +01:00
bash.scm
batik.scm
bdw-gc.scm
benchmark.scm
bioconductor.scm gnu: r-xcms: Update to 4.0.1. 2023-12-15 17:47:40 +01:00
bioinformatics.scm gnu: pyscenic: Update to 0.11.2-1.5f170fd. 2023-12-15 16:13:14 +01:00
bison.scm
bittorrent.scm gnu: libtorrent-rasterbar: Disable test_ssl test. 2023-12-14 23:12:23 +01:00
books.scm gnu: book-sparc: Update to 1.1.0. 2023-11-23 14:21:00 +00:00
boost.scm
bootloaders.scm gnu: Add grub-coreboot 2023-11-24 13:34:00 -08:00
bootstrap.scm
bqn.scm
browser-extensions.scm
build-tools.scm
busybox.scm
c.scm
calcurse.scm
calendar.scm
ccache.scm
cdrom.scm
cedille.scm
certs.scm
check.scm
chemistry.scm
chez.scm gnu: racket: Update to 8.11.1. 2023-12-13 12:58:43 +01:00
chicken.scm gnu: chicken: Update to 5.3.0. 2023-12-12 11:53:36 -05:00
chromium.scm
ci.scm gnu: cuirass: Update to bdc1f9f. 2023-11-22 16:51:47 +01:00
cinnamon.scm
clifm.scm gnu: Add clifm. 2023-11-22 16:51:46 +01:00
clojure.scm
cluster.scm
cmake.scm
cobol.scm
code.scm
commencement.scm gnu: commencement: Avoid cyclic dependency when targeting i586-pc-gnu. 2023-11-25 23:35:01 +01:00
compression.scm
compton.scm
configuration-management.scm
conky.scm gnu: conky: Update to 1.19.6. 2023-11-25 16:29:26 +01:00
connman.scm
containers.scm
convmv.scm
cook.scm
coq.scm gnu: Add coq-for-coqtail. 2023-11-23 12:56:43 +01:00
cpio.scm
cpp.scm gnu: folly: Update to 2023.11.06.00. 2023-11-23 12:56:44 +01:00
cppi.scm
cran.scm gnu: r-iotools: Update to 0.3-5. 2023-12-15 16:13:13 +01:00
crates-graphics.scm gnu: Add rust-ansiterm-0.12. 2023-11-28 07:59:27 +02:00
crates-gtk.scm
crates-io.scm gnu: rust-twox-hash-1: Update to 1.6.3. 2023-12-11 08:55:44 +02:00
cross-base.scm
cross-toolchain.scm
crypto.scm
cryptsetup.scm
cups.scm
curl.scm
cvassistant.scm
cybersecurity.scm
cyrus-sasl.scm
darwin.scm
databases.scm gnu: apache-arrow: Update to 14.0.0. 2023-12-15 16:13:07 +01:00
datamash.scm
datastructures.scm gnu: zix: Update to 0.4.2. 2023-11-25 14:47:51 +01:00
dav.scm gnu: radicale: Update to 3.1.8. 2023-11-23 14:21:05 +00:00
dbm.scm
dc.scm
debian.scm gnu: ubuntu-keyring: Update to 2023.11.28.1. 2023-12-10 10:24:45 +02:00
debug.scm
dejagnu.scm
dezyne.scm gnu: dezyne: Update to 2.18.0. 2023-12-15 12:01:57 +01:00
dhall.scm
dico.scm
dictionaries.scm
diffoscope.scm gnu: diffoscope: Update to 252. 2023-11-26 14:48:31 +01:00
digest.scm
direct-connect.scm
disk.scm gnu: Add findimagedupes. 2023-11-22 16:51:46 +01:00
display-managers.scm
distributed.scm
django.scm
djvu.scm
dlang.scm
dns.scm
docbook.scm
docker.scm
documentation.scm
dvtm.scm
easyrpg.scm
ebook.scm
ed.scm
education.scm
efi.scm
electronics.scm
elf.scm
elixir.scm
elm.scm
emacs-xyz.scm gnu: emacs-ein: Update to 20230826. 2023-11-25 16:29:26 +01:00
emacs.scm
embedded.scm gnu: ucsim: Update to 0.8.2. 2023-11-26 14:49:00 +01:00
emulators.scm gnu: Add qtrvsim. 2023-11-25 14:47:51 +01:00
enchant.scm
engineering.scm
enlightenment.scm
entr.scm
erlang.scm
esolangs.scm
fabric-management.scm
fcitx.scm
fcitx5.scm gnu: fcitx5-rime: Update to 5.1.3. 2023-11-22 20:32:50 +08:00
figlet.scm
file-systems.scm
file.scm
finance.scm gnu: beancount: Update to 2.3.6. 2023-11-23 14:03:27 +00:00
firmware.scm gnu: make-crust-package: Don't run from avr. 2023-12-12 08:45:46 +02:00
flashing-tools.scm gnu: uuu: Update to 1.5.125. 2023-11-24 18:02:03 +01:00
flex.scm
fltk.scm
fonts.scm gnu: font-sarasa-gothic: Update to 0.42.6. 2023-11-25 22:00:10 +08:00
fontutils.scm
forth.scm
fpga.scm
freedesktop.scm
freeipmi.scm
fribidi.scm
fsf.scm
ftp.scm
fvwm.scm
game-development.scm gnu: godot: Update to 4.1.3. 2023-11-23 14:21:05 +00:00
games.scm
gawk.scm
gcal.scm
gcc.scm
gd.scm
gdb.scm
genealogy.scm
genimage.scm
geo.scm
gettext.scm
ghostscript.scm
gimp.scm
gkrellm.scm
gl.scm
glib.scm
gnome-xyz.scm
gnome.scm gnu: Add libxml++-3. 2023-12-15 13:51:39 +01:00
gnu-doc.scm
gnu-pw-mgr.scm
gnucash.scm
gnunet.scm
gnupg.scm gnu: libgpg-error: Do not assume that target is a triplet. 2023-12-11 23:11:26 +01:00
gnustep.scm
gnuzilla.scm
gobby.scm
golang-check.scm
golang.scm gnu: go-gopkg-in-yaml-v3: Skip tests on powerpc-linux. 2023-11-27 10:18:46 +02:00
gperf.scm
gpodder.scm
gps.scm
graph.scm
graphics.scm
graphviz.scm
groff.scm
groovy.scm
gsasl.scm
gstreamer.scm
gtk.scm gnu: at-spi2-core: Skip tests when cross-compiling. 2023-11-28 07:59:43 +02:00
guile-wm.scm
guile-xyz.scm gnu: Add guile-algorithms 2023-11-26 14:48:31 +01:00
guile.scm
gv.scm
gxmessage.scm
hardware.scm
haskell-apps.scm
haskell-check.scm
haskell-crypto.scm
haskell-web.scm
haskell-xyz.scm
haskell.scm
haxe.scm
heads.scm
hexedit.scm
high-availability.scm
hugs.scm
hunspell.scm
hurd.scm
hyperledger.scm
i2p.scm
ibus.scm
icu4c.scm
idris.scm
idutils.scm
image-processing.scm
image-viewers.scm
image.scm
imagemagick.scm
inklingreader.scm
inkscape.scm
installers.scm
instrumentation.scm gnu: Add babeltrace/dev. 2023-11-22 16:51:46 +01:00
ipfs.scm
irc.scm
irods.scm
iso-codes.scm
jami.scm
java-bootstrap.scm
java-compression.scm
java-graphics.scm
java-maths.scm
java-rdf.scm
java-xml.scm
java.scm
javascript.scm gnu: Add js-datatables-1.9. 2023-12-15 16:13:07 +01:00
jemalloc.scm
jose.scm
julia-jll.scm
julia-xyz.scm
julia.scm
jupyter.scm
kawa.scm
kde-frameworks.scm
kde-games.scm
kde-internet.scm
kde-multimedia.scm
kde-pim.scm
kde-plasma.scm
kde-systemtools.scm
kde-utils.scm
kde.scm
kerberos.scm
kodi.scm
language.scm gnu: praat: Update to 6.4. 2023-11-23 14:21:06 +00:00
ld-wrapper.in
lean.scm gnu: lean: Update to 3.51.1. 2023-12-11 23:39:05 +01:00
lego.scm
less.scm
lesstif.scm
libbsd.scm
libcanberra.scm
libdaemon.scm
libedit.scm
libevent.scm
libffcall.scm
libffi.scm
libftdi.scm
libidn.scm
libphidget.scm
libreoffice.scm
libsigsegv.scm
libunistring.scm
libunwind.scm
libusb.scm
license.scm
lighting.scm
linphone.scm
linux.scm gnu: linux-libre: Update to 6.6.6. 2023-12-12 06:54:15 +08:00
lirc.scm
lisp-check.scm gnu: sbcl-lisp-critic: Update to 1.1-ea19f82. 2023-11-23 10:55:25 -06:00
lisp-xyz.scm gnu: Add cl-machine-state. 2023-12-12 13:28:45 +01:00
lisp.scm gnu: txr: Remove obsolete fix. 2023-12-14 10:49:23 +01:00
llvm.scm gnu: system->llvm-target-arch: Add avr target. 2023-12-12 08:57:10 +02:00
logging.scm
logo.scm
loko.scm
lout.scm
lsof.scm
lua.scm gnu: Add antifennel. 2023-11-24 18:05:18 +01:00
lxde.scm
lxqt.scm
m4.scm
machine-learning.scm
magic-wormhole.scm
mail.scm gnu: aerc: Enable building without zoxide. 2023-11-24 12:51:28 +02:00
make-bootstrap.scm
man.scm
markup.scm gnu: smu: Fix cross-compilation. 2023-11-25 14:47:51 +01:00
marst.scm
mastodon.scm
mate.scm
maths.scm gnu: scilab: Set default SCIHOME value. 2023-11-23 12:56:43 +01:00
matrix.scm
maven-parent-pom.scm
maven.scm
mc.scm
mcrypt.scm
medical.scm
mercury.scm
mes.scm
messaging.scm
microcom.scm
minetest.scm
mingw.scm
moe.scm
mold.scm
monitoring.scm
moreutils.scm
motti.scm
mp3.scm
mpd.scm gnu: mympd: Update to 13.0.5. 2023-11-23 14:01:17 +00:00
mpi.scm
mtools.scm
multiprecision.scm
music.scm gnu: Add alsa-scarlett-gui. 2023-12-15 15:12:06 +01:00
musl.scm
myrddin.scm
nano.scm
ncdu.scm gnu: ncdu: Use zig-build-system. 2023-12-10 11:09:09 +08:00
ncurses.scm gnu: stfl: Fix cross-building. 2023-11-28 07:59:40 +02:00
netpbm.scm
nettle.scm
networking.scm gnu: yggdrasil: Update to 0.5.2. 2023-11-25 23:35:03 +01:00
nfs.scm
nickle.scm
nicotine.scm
nim.scm
ninja.scm
node-xyz.scm
node.scm
notcurses.scm
noweb.scm
nss.scm
ntp.scm
nutrition.scm
nvi.scm
ocaml.scm
ocr.scm
onc-rpc.scm
openbox.scm
opencl.scm
opencog.scm
openkinect.scm
openldap.scm
openpgp.scm
openstack.scm
orange.scm
orpheus.scm
ots.scm
package-management.scm gnu: guix-build-coordinator: Update to 92.78df0b3. 2023-11-23 14:21:05 +00:00
pantheon.scm
parallel.scm gnu: parallel: Update to 20231122. 2023-11-26 10:27:08 +02:00
pascal.scm
password-utils.scm
patchutils.scm
patool.scm
pciutils.scm
pcre.scm
pdf.scm gnu: pdfarranger: Update to 1.10.1. 2023-12-11 23:34:31 +01:00
pem.scm
pep.scm
perl-check.scm
perl-compression.scm
perl-maths.scm
perl-web.scm
perl.scm
perl6.scm
phabricator.scm
photo.scm
php.scm gnu: php: Add another test to the skip-test list. 2023-11-27 13:19:00 +02:00
piet.scm
pikchr.scm
pkg-config.scm
plan9.scm
plotutils.scm
poedit.scm
polkit.scm
popt.scm
potassco.scm gnu: Add clingo-dl. 2023-11-23 09:29:05 +01:00
presentation.scm
pretty-print.scm
printers.scm
profiling.scm
prolog.scm
protobuf.scm gnu: protobuf: Fix cross-compilation. 2023-11-25 14:47:51 +01:00
pth.scm
pulseaudio.scm
pumpio.scm
pure.scm
purescript.scm
pv.scm
pypy.scm gnu: pypy: Update to 7.3.13. 2023-12-14 23:12:24 +01:00
python-build.scm
python-check.scm
python-compression.scm
python-crypto.scm
python-science.scm gnu: python-vaex-core: Add missing input. 2023-12-15 16:13:14 +01:00
python-web.scm
python-xyz.scm gnu: python-pyfuse3: Update to 3.3.0. 2023-11-23 14:03:11 +00:00
python.scm
qt.scm
racket.scm gnu: racket: Update to 8.11.1. 2023-12-13 12:58:43 +01:00
radio.scm gnu: inspectrum: Update to 0.3.1. 2023-12-12 15:50:01 +01:00
ragel.scm
rails.scm
raspberry-pi.scm
ratpoison.scm
rcm.scm
rdesktop.scm
rdf.scm
re2c.scm
readline.scm
rednotebook.scm
regex.scm
robotics.scm
rocm.scm
rpc.scm
rpm.scm
rrdtool.scm
rsync.scm
ruby.scm
rush.scm
rust-apps.scm gnu: zoxide: Don't install the sources. 2023-11-28 07:59:43 +02:00
rust.scm gnu: rust-1.64: Don't make package public. 2023-12-13 10:08:43 +02:00
sagemath.scm
samba.scm gnu: Add ppp-2.4.9. 2023-11-25 23:35:01 +01:00
sawfish.scm
scanner.scm
scheme.scm
screen.scm
scribus.scm
scsi.scm
sdl.scm
search.scm
security-token.scm
selinux.scm
sequoia.scm
serialization.scm
serveez.scm
shells.scm
shellutils.scm
simh.scm
simulation.scm
skarnet.scm
skribilo.scm
slang.scm
smalltalk.scm
sml.scm
solidity.scm
sourcehut.scm
speech.scm
sphinx.scm
spice.scm
spreadsheet.scm
sqlite.scm
squirrel.scm
ssh.scm
sssd.scm
statistics.scm gnu: r-desctools: Update to 0.99.52. 2023-12-15 16:13:14 +01:00
stb.scm
stenography.scm
storage.scm
suckless.scm
sugar.scm
swig.scm
sycl.scm
sync.scm
syncthing.scm
syndication.scm gnu: newsboat: Honor the #:tests? flag. 2023-11-28 07:59:40 +02:00
synergy.scm
task-management.scm
task-runners.scm
tbb.scm
tcl.scm
telegram.scm
telephony.scm
terminals.scm Merge remote-tracking branch 'origin/master' into rust-team 2023-12-10 13:25:47 +02:00
terraform.scm
tex.scm gnu: texlive-bin: Skip another test on powerpc-linux. 2023-11-27 08:01:19 +02:00
texinfo.scm
texlive.scm
text-editors.scm
textutils.scm gnu: odt2txt: Fix cross-compilation. 2023-11-25 14:47:51 +01:00
time.scm
tls.scm Revert "gnu: openssl: Don't error when targeting avr." 2023-12-12 13:58:16 +02:00
tmux.scm
toolkits.scm
tor.scm gnu: tor: Update to 0.4.8.10. 2023-12-10 09:49:26 +02:00
toys.scm gnu: daikichi: Fix cross-compilation. 2023-11-25 14:47:51 +01:00
tree-sitter.scm
tryton.scm
tv.scm
uglifyjs.scm
uml.scm
unicode.scm
unrtf.scm
upnp.scm
usb-modeswitch.scm
uucp.scm
valgrind.scm
version-control.scm Merge remote-tracking branch 'origin/master' into rust-team 2023-12-10 13:25:47 +02:00
video.scm Merge remote-tracking branch 'origin/master' into rust-team 2023-12-10 13:25:47 +02:00
vim.scm gnu: Add vim-jedi-vim. 2023-11-26 11:02:28 +02:00
virtualization.scm
vlang.scm
vnc.scm
vpn.scm gnu: openvpn: Update to 2.6.7. 2023-12-11 23:24:19 +01:00
vulkan.scm
w3m.scm
wdiff.scm
weather.scm
web-browsers.scm gnu: nyxt: Update to 3.10.0. 2023-12-12 15:50:01 +01:00
web.scm gnu: hpcguix-web: Update to 0.4.0. 2023-12-13 12:58:43 +01:00
webkit.scm
wget.scm
wine.scm
wireservice.scm
wm.scm
wordnet.scm
wv.scm
wxwidgets.scm
xdisorg.scm Merge branch 'master' into mesa-updates 2023-11-26 11:12:59 -05:00
xfce.scm
xfig.scm
xiph.scm
xml.scm
xnee.scm
xorg.scm gnu: xorg-server: Update to 21.1.10 [security fixes]. 2023-12-13 22:08:38 -05:00
zig-xyz.scm
zig.scm gnu: zig-0.10: Inherit from zig-0.9. 2023-11-25 22:00:27 +08:00
zile.scm
zwave.scm