8394619bac
This commit was obtained by running: ./pre-inst-env guix style without any additional argument.
568 lines
27 KiB
Scheme
568 lines
27 KiB
Scheme
;;; GNU Guix --- Functional package management for GNU
|
|
;;; Copyright © 2015, 2016, 2017 Ricardo Wurmus <rekado@elephly.net>
|
|
;;; Copyright © 2016, 2020, 2021 Efraim Flashner <efraim@flashner.co.il>
|
|
;;; Copyright © 2020, 2021 Nicolò Balzarotti <nicolo@nixo.xyz>
|
|
;;; Copyright © 2020 Tim Howes <timhowes@lavabit.com>
|
|
;;; Copyright © 2020 Tobias Geerinckx-Rice <me@tobias.gr>
|
|
;;; Copyright © 2021 Jean-Baptiste Volatier <jbv@pm.me>
|
|
;;; Copyright © 2021 Simon Tournier <zimon.toutoune@gmail.com>
|
|
;;; Copyright © 2021 Maxim Cournoyer <maxim.cournoyer@gmail.com>
|
|
;;;
|
|
;;; This file is part of GNU Guix.
|
|
;;;
|
|
;;; GNU Guix is free software; you can redistribute it and/or modify it
|
|
;;; under the terms of the GNU General Public License as published by
|
|
;;; the Free Software Foundation; either version 3 of the License, or (at
|
|
;;; your option) any later version.
|
|
;;;
|
|
;;; GNU Guix is distributed in the hope that it will be useful, but
|
|
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
|
|
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
|
;;; GNU General Public License for more details.
|
|
;;;
|
|
;;; You should have received a copy of the GNU General Public License
|
|
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
|
|
|
|
(define-module (gnu packages julia)
|
|
#:use-module ((guix licenses) #:prefix license:)
|
|
#:use-module (guix packages)
|
|
#:use-module (guix download)
|
|
#:use-module (guix utils)
|
|
#:use-module (guix git-download)
|
|
#:use-module (guix build-system gnu)
|
|
#:use-module (gnu packages)
|
|
#:use-module (gnu packages algebra)
|
|
#:use-module (gnu packages base)
|
|
#:use-module (gnu packages compression)
|
|
#:use-module (gnu packages curl)
|
|
#:use-module (gnu packages elf)
|
|
#:use-module (gnu packages gcc)
|
|
#:use-module (gnu packages llvm)
|
|
#:use-module (gnu packages libevent)
|
|
#:use-module (gnu packages libunwind)
|
|
#:use-module (gnu packages maths)
|
|
#:use-module (gnu packages multiprecision) ; mpfr
|
|
#:use-module (gnu packages pcre)
|
|
#:use-module (gnu packages perl)
|
|
#:use-module (gnu packages pkg-config)
|
|
#:use-module (gnu packages python)
|
|
#:use-module (gnu packages python-xyz)
|
|
#:use-module (gnu packages textutils)
|
|
#:use-module (gnu packages ssh)
|
|
#:use-module (gnu packages tls)
|
|
#:use-module (gnu packages version-control)
|
|
#:use-module (gnu packages web)
|
|
#:use-module (gnu packages wget)
|
|
#:use-module (ice-9 match))
|
|
|
|
(define libunwind-julia
|
|
;; The Julia projects requires their patched version.
|
|
;; Get from https://github.com/JuliaLang/julia/tree/master/deps/patches
|
|
(package
|
|
(inherit libunwind)
|
|
(name "libunwind-julia")
|
|
(version "1.3.1")
|
|
(source
|
|
(origin
|
|
(method url-fetch)
|
|
(uri (string-append "mirror://savannah/libunwind/libunwind-"
|
|
version ".tar.gz"))
|
|
(sha256
|
|
(base32
|
|
"1y0l08k6ak1mqbfj6accf9s5686kljwgsl4vcqpxzk5n74wpm6a3"))
|
|
(patches
|
|
(append
|
|
;; Fix linker issue for i686-linux because GCC10 changed default
|
|
;; (see '-fno-common' option).
|
|
(search-patches "libunwind-julia-fix-GCC10-fno-common.patch")
|
|
(list
|
|
(julia-patch "libunwind-prefer-extbl"
|
|
"0lr4dafw8qyfh8sw8hhbwkql1dlhqv8px7k81y2l20hhxfgnh2m1")
|
|
(julia-patch "libunwind-static-arm"
|
|
"1jk3bmiw61ypcchqkk1fyg5wh8wpggk574wxyfyaic870zh3lhgq")
|
|
(julia-patch "libunwind-cfa-rsp"
|
|
"1aswjhvysahhldbzh1afbf0hsjxrvs6xidsz2i7s1cjkjbdiia1z"))))))
|
|
(home-page "https://github.com/JuliaLang/tree/master/deps/")))
|
|
|
|
(define (julia-patch-url version name)
|
|
(string-append "https://raw.githubusercontent.com/JuliaLang/julia/v" version
|
|
"/deps/patches/" name ".patch"))
|
|
|
|
(define-public (julia-patch name sha)
|
|
(let ((version "1.6.1"))
|
|
(origin (method url-fetch)
|
|
(uri (julia-patch-url version name))
|
|
(sha256 (base32 sha))
|
|
(file-name name))))
|
|
|
|
(define-public libwhich
|
|
(package
|
|
(name "libwhich")
|
|
(version "1.1.0")
|
|
(source
|
|
(origin
|
|
(method git-fetch)
|
|
(uri (git-reference
|
|
(url "https://github.com/vtjnash/libwhich")
|
|
;; fixes linux-vdso.so related tests
|
|
(commit "87cffe10080c98e7b5786c5166e420bf1ada1d41")))
|
|
(file-name (string-append name "-" version "-checkout"))
|
|
(sha256
|
|
(base32
|
|
"1bpa0fcqpa3ai3hm8mz0p13bf76fsq53wsfcx5qw302zh22108xr"))))
|
|
(arguments
|
|
`(#:make-flags
|
|
(list (string-append "CC=" ,(cc-for-target)))
|
|
#:phases
|
|
(modify-phases %standard-phases
|
|
(delete 'configure)
|
|
(add-before 'check 'set-ld-library-path
|
|
(lambda* (#:key native-inputs inputs #:allow-other-keys)
|
|
(setenv "LD_LIBRARY_PATH"
|
|
(string-append (assoc-ref (or native-inputs inputs) "zlib")
|
|
"/lib"))))
|
|
(replace 'install
|
|
(lambda* (#:key outputs #:allow-other-keys)
|
|
(let ((out (assoc-ref outputs "out")))
|
|
(install-file "libwhich" (string-append out "/bin")))
|
|
#t)))))
|
|
(native-inputs
|
|
;; used for tests
|
|
(list zlib))
|
|
(build-system gnu-build-system)
|
|
(home-page "https://github.com/vtjnash/libwhich")
|
|
(synopsis "Like @code{which}, for dynamic libraries")
|
|
(description "@code{libwhich} is like @code{which}, but for dynamic
|
|
libraries. It is also a bit like @code{ldd} and @code{otool -L}.")
|
|
(license license:expat)))
|
|
|
|
(define-public julia
|
|
(package
|
|
(name "julia")
|
|
(version "1.6.3")
|
|
(source (origin
|
|
(method url-fetch)
|
|
(uri (string-append
|
|
"https://github.com/JuliaLang/julia/releases/download/v"
|
|
version "/julia-" version ".tar.gz"))
|
|
(sha256
|
|
(base32
|
|
"1515x8fs25l3f9csbmd1v4nm041zvjnvigy6s5iidy4yrkwdx4r5"))
|
|
(patches
|
|
(search-patches "julia-SOURCE_DATE_EPOCH-mtime.patch"
|
|
"julia-allow-parallel-build.patch"))))
|
|
(build-system gnu-build-system)
|
|
(arguments
|
|
`(#:test-target "test"
|
|
#:modules ((ice-9 match)
|
|
(guix build gnu-build-system)
|
|
(guix build utils))
|
|
|
|
;; The test suite takes many times longer than building and
|
|
;; can easily fail on smaller machines when they run out of memory.
|
|
#:tests? ,(not (target-aarch64?))
|
|
|
|
;; Do not strip binaries to keep support for full backtraces.
|
|
;; See https://github.com/JuliaLang/julia/issues/17831
|
|
#:strip-binaries? #f
|
|
|
|
;; The DSOs use $ORIGIN to refer to each other, but (guix build
|
|
;; gremlin) doesn't support it yet, so skip this phase.
|
|
#:validate-runpath? #f
|
|
|
|
#:phases
|
|
(modify-phases %standard-phases
|
|
(delete 'configure)
|
|
(add-after 'unpack 'prepare-deps
|
|
(lambda* (#:key inputs #:allow-other-keys)
|
|
;; needed by libwhich
|
|
(setenv "LD_LIBRARY_PATH"
|
|
(string-join (map (lambda (pkg)
|
|
(string-append (assoc-ref inputs pkg)
|
|
"/lib"))
|
|
'("curl" "dsfmt"
|
|
"gmp" "lapack"
|
|
"libssh2" "libnghttp2" "libgit2"
|
|
"mbedtls" "mpfr"
|
|
"openblas" "openlibm" "pcre2"
|
|
"suitesparse" "gfortran:lib"))
|
|
":"))))
|
|
;; FIXME: Building the documentation requires Julia packages that
|
|
;; would be downloaded from the Internet. We should build them in a
|
|
;; separate build phase.
|
|
(add-after 'unpack 'disable-documentation
|
|
(lambda _
|
|
(substitute* "Makefile"
|
|
(("(install: .*) \\$\\(BUILDROOT\\)/doc/_build/html/en/index.html" _ line)
|
|
(string-append line "\n"))
|
|
(("src ui doc deps")
|
|
"src ui deps"))))
|
|
(add-after 'unpack 'use-system-libwhich
|
|
(lambda* (#:key inputs #:allow-other-keys)
|
|
;; don't build it
|
|
(substitute* "deps/Makefile"
|
|
(("DEP_LIBS \\+= libwhich") ""))
|
|
;; call our version
|
|
(substitute* "base/Makefile"
|
|
(("\\$\\$\\(build_depsbindir\\)/libwhich")
|
|
(search-input-file inputs "/bin/libwhich")))))
|
|
(add-after 'unpack 'change-number-of-precompile-statements
|
|
(lambda _
|
|
;; Remove nss-certs drops the number of statements below 1200,
|
|
;; causing the build to fail prematurely.
|
|
(substitute* "contrib/generate_precompile.jl"
|
|
(("1200") "1100"))))
|
|
;; For some reason libquadmath is unavailable on this architecture.
|
|
;; https://github.com/JuliaLang/julia/issues/41613
|
|
,@(if (target-aarch64?)
|
|
'((add-after 'unpack 'drop-libquadmath-on-aarch64
|
|
(lambda _
|
|
(substitute* '("contrib/fixup-libgfortran.sh"
|
|
"deps/csl.mk"
|
|
"base/Makefile")
|
|
((".*libquadmath.*") ""))
|
|
(substitute* "Makefile"
|
|
(("libquadmath ") ""))
|
|
#t)))
|
|
'())
|
|
(add-before 'check 'set-home
|
|
;; Some tests require a home directory to be set.
|
|
(lambda _ (setenv "HOME" "/tmp") #t))
|
|
(add-before 'build 'fix-include-and-link-paths
|
|
(lambda* (#:key inputs #:allow-other-keys)
|
|
;; LIBUTF8PROC is a linker flag, not a build target. It is
|
|
;; included in the LIBFILES_* variable which is used as a
|
|
;; collection of build targets and a list of libraries to link
|
|
;; against.
|
|
(substitute* "src/flisp/Makefile"
|
|
(("\\$\\(BUILDDIR\\)/\\$\\(EXENAME\\)\\$\\(EXE\\): \\$\\(OBJS\\) \\$\\(LIBFILES_release\\)")
|
|
"$(BUILDDIR)/$(EXENAME)$(EXE): $(OBJS) $(LLT_release)")
|
|
(("\\$\\(BUILDDIR\\)/\\$\\(EXENAME\\)-debug$(EXE): \\$\\(DOBJS\\) \\$\\(LIBFILES_debug\\)")
|
|
"$(BUILDDIR)/$(EXENAME)-debug\\$\\(EXE\\): $(DOBJS) $(LLT_debug)"))
|
|
|
|
;; The REPL must be linked with libuv.
|
|
(substitute* "cli/Makefile"
|
|
(("JLDFLAGS \\+= ")
|
|
(string-append "JLDFLAGS += "
|
|
(assoc-ref %build-inputs "libuv")
|
|
"/lib/libuv.so ")))
|
|
|
|
(substitute* "base/Makefile"
|
|
(("\\$\\(build_includedir\\)/uv/errno.h")
|
|
(search-input-file inputs "/include/uv/errno.h")))))
|
|
(add-before 'build 'replace-default-shell
|
|
(lambda _
|
|
(substitute* "base/client.jl"
|
|
(("/bin/sh") (which "sh")))))
|
|
(add-before 'build 'shared-objects-paths
|
|
(lambda* (#:key inputs #:allow-other-keys)
|
|
(let ((jlpath
|
|
(lambda (pkgname)
|
|
(string-append
|
|
"stdlib/" pkgname "_jll/src/" pkgname "_jll.jl")))
|
|
(from
|
|
(lambda (libname)
|
|
(string-append "const " libname " = .*\\.so")))
|
|
(to
|
|
(lambda* (pkg libname #:optional libname_jl)
|
|
(string-append
|
|
"const " (or libname_jl libname) "= \""
|
|
(assoc-ref inputs pkg) "/lib/" libname ".so"))))
|
|
(substitute* (jlpath "dSFMT")
|
|
(((from "libdSFMT")) (to "dsfmt" "libdSFMT")))
|
|
(substitute* (jlpath "GMP")
|
|
(((from "libgmp")) (to "gmp" "libgmp"))
|
|
(((from "libgmpxx")) (to "gmp" "libgmpxx")))
|
|
(substitute* (jlpath "libLLVM")
|
|
(((from "libLLVM")) (to "llvm" "libLLVM")))
|
|
(substitute* (jlpath "LibCURL")
|
|
(((from "libcurl")) (to "curl" "libcurl")))
|
|
(substitute* (jlpath "LibGit2")
|
|
(((from "libgit2")) (to "libgit2" "libgit2")))
|
|
(substitute* (jlpath "LibSSH2")
|
|
(((from "libssh2")) (to "libssh2" "libssh2")))
|
|
(substitute* (jlpath "LibUV")
|
|
(((from "libuv")) (to "libuv" "libuv")))
|
|
(substitute* (jlpath "LibUnwind")
|
|
(((from "libunwind")) (to "libunwind" "libunwind")))
|
|
(substitute* (jlpath "MPFR")
|
|
(((from "libmpfr")) (to "mpfr" "libmpfr")))
|
|
(substitute* (jlpath "MbedTLS")
|
|
;; For the newer version of mbedtls-apache:
|
|
(("libmbedcrypto.so.5") "libmbedcrypto.so.6")
|
|
(((from "libmbedcrypto")) (to "mbedtls" "libmbedcrypto"))
|
|
(((from "libmbedtls")) (to "mbedtls" "libmbedtls"))
|
|
(((from "libmbedx509")) (to "mbedtls" "libmbedx509")))
|
|
(substitute* (jlpath "nghttp2")
|
|
(((from "libnghttp2")) (to "libnghttp2" "libnghttp2")))
|
|
(substitute* (jlpath "OpenBLAS")
|
|
(((from "libopenblas")) (to "openblas" "libopenblas")))
|
|
(substitute* (jlpath "OpenLibm")
|
|
(((from "libopenlibm")) (to "openlibm" "libopenlibm")))
|
|
(substitute* (jlpath "PCRE2")
|
|
(((from "libpcre2")) (to "pcre2" "libpcre2" "libpcre2_8")))
|
|
(substitute* (jlpath "SuiteSparse")
|
|
(((from "libamd")) (to "suitesparse" "libamd"))
|
|
(((from "libbtf")) (to "suitesparse" "libbtf"))
|
|
(((from "libcamd")) (to "suitesparse" "libcamd"))
|
|
(((from "libccolamd")) (to "suitesparse" "libccolamd"))
|
|
(((from "libcholmod")) (to "suitesparse" "libcholmod"))
|
|
(((from "libcolamd")) (to "suitesparse" "libcolamd"))
|
|
(((from "libklu")) (to "suitesparse" "libklu"))
|
|
(((from "libldl")) (to "suitesparse" "libldl"))
|
|
(((from "librbio")) (to "suitesparse" "librbio"))
|
|
(((from "libspqr")) (to "suitesparse" "libspqr"))
|
|
(((from "libsuitesparse")) (to "suitesparse" "libsuitesparse"))
|
|
(((from "libsuitesparseconfig"))
|
|
(to "suitesparse" "libsuitesparseconfig"))
|
|
(((from "libumfpack")) (to "suitesparse" "libumfpack")))
|
|
(substitute* (jlpath "Zlib")
|
|
(((from "libz")) (to "zlib" "libz"))))))
|
|
(add-after 'unpack 'enable-parallel-tests
|
|
(lambda* (#:key parallel-tests? #:allow-other-keys)
|
|
(setenv "JULIA_CPU_THREADS" (if parallel-tests?
|
|
(number->string (parallel-job-count))
|
|
"1"))
|
|
(format #t "JULIA_CPU_THREADS environment variable set to ~a~%"
|
|
(getenv "JULIA_CPU_THREADS"))))
|
|
(add-after 'unpack 'adjust-test-suite
|
|
(lambda* (#:key inputs #:allow-other-keys)
|
|
(let ((pcre2 (assoc-ref inputs "pcre2"))
|
|
(mbedtls-apache (assoc-ref inputs "mbedtls"))
|
|
(mpfr (assoc-ref inputs "mpfr"))
|
|
(gmp (assoc-ref inputs "gmp"))
|
|
(nghttp2 (assoc-ref inputs "libnghttp2"))
|
|
(suitesparse (assoc-ref inputs "suitesparse")))
|
|
;; Some tests only check to see if the input is the correct version.
|
|
(substitute* "stdlib/PCRE2_jll/test/runtests.jl"
|
|
(("10.36.0") ,(package-version pcre2)))
|
|
(substitute* "stdlib/MbedTLS_jll/test/runtests.jl"
|
|
(("2.24.0") ,(package-version mbedtls-apache)))
|
|
(substitute* "stdlib/MPFR_jll/test/runtests.jl"
|
|
(("4.1.0") ,(package-version mpfr)))
|
|
(substitute* "stdlib/GMP_jll/test/runtests.jl"
|
|
(("6.2.0") ,(package-version gmp)))
|
|
(substitute* "stdlib/nghttp2_jll/test/runtests.jl"
|
|
(("1.41.0") ,(package-version nghttp2)))
|
|
(substitute* "stdlib/SuiteSparse_jll/test/runtests.jl"
|
|
(("5004") ,(string-replace-substring
|
|
(version-major+minor
|
|
(package-version suitesparse)) "." "0"))))))
|
|
(add-before 'check 'disable-broken-tests
|
|
(lambda _
|
|
;; disabling REPL tests because they require a stdin
|
|
;; There are some read-only precompile issues in the 1.6 series.
|
|
;; https://github.com/JuliaLang/julia/pull/41614
|
|
;; https://github.com/JuliaLang/julia/issues/41156
|
|
(substitute* "test/choosetests.jl"
|
|
(("skip_tests = \\[\\]")
|
|
"skip_tests = [\"REPL\", \"precompile\"]"))
|
|
;; Dates/io tests fail on master when networking is unavailable
|
|
;; https://github.com/JuliaLang/julia/issues/34655
|
|
(substitute* "stdlib/Dates/test/io.jl"
|
|
(("using Dates") "import Dates
|
|
using Dates: @dateformat_str, Date, DateTime, DateFormat, Time"))
|
|
;; Upstream bug I found when packaging
|
|
;; https://github.com/JuliaLang/julia/issues/35785
|
|
(substitute* "test/file.jl"
|
|
(("@test dirname\\(t\\) == d") "@test_broken dirname(t) == d"))
|
|
;; julia embeds a certificate, we are not doing that
|
|
(substitute* "stdlib/MozillaCACerts_jll/test/runtests.jl"
|
|
(("@test isfile\\(MozillaCACerts_jll.cacert\\)")
|
|
"@test_broken isfile(MozillaCACerts_jll.cacert)"))
|
|
;; since certificate is not present some tests are failing in network option
|
|
(substitute* "usr/share/julia/stdlib/v1.6/NetworkOptions/test/runtests.jl"
|
|
(("@test isfile\\(bundled_ca_roots\\(\\)\\)")
|
|
"@test_broken isfile(bundled_ca_roots())")
|
|
(("@test ispath\\(ca_roots_path\\(\\)\\)")
|
|
"@test_broken ispath(ca_roots_path())")
|
|
(("@test ca_roots_path\\(\\) \\!= bundled_ca_roots\\(\\)")
|
|
"@test_broken ca_roots_path() != bundled_ca_roots()"))
|
|
;; WARNING: failed to select UTF-8 encoding, using ASCII
|
|
;; Using 'setlocale' doesn't affect the test failures.
|
|
;(setlocale LC_ALL "en_US.utf8")
|
|
;(setenv "LC_ALL" "en_US.utf8")
|
|
(substitute* "test/cmdlineargs.jl"
|
|
(("test v\\[3") "test_broken v[3")
|
|
(("test isempty\\(v\\[3") "test_broken isempty(v[3"))
|
|
;; These tests randomly fails because they depend on CPU.
|
|
(substitute* "stdlib/LinearAlgebra/test/matmul.jl"
|
|
;; Fixed in v1.6.4 (see:
|
|
;; https://github.com/JuliaLang/julia/blob/v1.6.4/
|
|
;; stdlib/LinearAlgebra/test/matmul.jl#L155).
|
|
(("@test mul\\!\\(C, vf, transpose\\(vf\\), 2, 3\\)\
|
|
== 2vf\\*vf' \\.\\+ 3C0")
|
|
"@test mul!(C, vf, transpose(vf), 2, 3) ≈ 2vf*vf' .+ 3C0"))
|
|
(substitute* "test/math.jl"
|
|
;; @test_broken cannot be used because if the test randomly
|
|
;; passes, then it also raises an error.
|
|
(("@test isinf\\(log1p\\(-one\\(T\\)\\)\\)")
|
|
" "))))
|
|
(add-before 'install 'symlink-libraries
|
|
(lambda* (#:key inputs outputs #:allow-other-keys)
|
|
(let ((link
|
|
(lambda (pkgname dir pred)
|
|
(map (lambda (file)
|
|
(unless (file-exists?
|
|
(string-append dir (basename file)))
|
|
(symlink file (string-append dir (basename file)))))
|
|
(find-files (string-append (assoc-ref inputs pkgname)
|
|
"/lib") pred)))))
|
|
(link "curl" "usr/lib/" "\\.so") ; missing libpthreads libLLVM-11jl
|
|
(link "suitesparse" "usr/lib/julia/" "libbtf\\.so")
|
|
(link "suitesparse" "usr/lib/julia/" "libklu\\.so")
|
|
(link "suitesparse" "usr/lib/julia/" "libldl\\.so")
|
|
(link "suitesparse" "usr/lib/julia/" "librbio\\.so")
|
|
(link "gmp" "usr/lib/julia/" "libgmpxx\\.so")
|
|
(link "libuv" "usr/lib/julia/" "libuv\\.so")
|
|
(link "zlib" "usr/lib/julia/" "libz\\.so")
|
|
(link "libunwind" "usr/lib/julia/" "libunwind\\.so")
|
|
(symlink (string-append (assoc-ref inputs "p7zip") "/bin/7z")
|
|
"usr/libexec/7z"))))
|
|
(add-after 'install 'symlink-llvm-utf8proc
|
|
(lambda* (#:key inputs outputs #:allow-other-keys)
|
|
(let* ((out (assoc-ref outputs "out"))
|
|
(link
|
|
(lambda (pkgname pred)
|
|
(map (lambda (file)
|
|
(unless (file-exists?
|
|
(string-append out "/lib/julia/"
|
|
(basename file)))
|
|
(symlink file (string-append out "/lib/julia/"
|
|
(basename file)))))
|
|
(find-files (string-append (assoc-ref inputs pkgname)
|
|
"/lib") pred)))))
|
|
(link "llvm" "libLLVM-11jl\\.so")
|
|
(link "utf8proc" "libutf8proc\\.so"))))
|
|
(add-after 'install 'make-wrapper
|
|
(lambda* (#:key inputs outputs #:allow-other-keys)
|
|
(let* ((out (assoc-ref outputs "out"))
|
|
(bin (string-append out "/bin"))
|
|
(program "julia"))
|
|
(with-directory-excursion bin
|
|
(wrap-program program
|
|
`("JULIA_LOAD_PATH" ":" prefix
|
|
("" "$JULIA_LOAD_PATH"))
|
|
`("JULIA_DEPOT_PATH" ":" prefix
|
|
("" "$JULIA_DEPOT_PATH"))))))))
|
|
#:make-flags
|
|
(list
|
|
(string-append "prefix=" (assoc-ref %outputs "out"))
|
|
|
|
;; Passing the MARCH or JULIA_CPU_TARGET flag is necessary to build
|
|
;; binary substitutes for the supported architectures. See also
|
|
;; https://docs.julialang.org/en/v1/devdocs/sysimg/#Specifying-multiple-system-image-targets
|
|
,(match (or (%current-target-system)
|
|
(%current-system))
|
|
("x86_64-linux"
|
|
;; These are the flags that upstream uses for their binaries.
|
|
"JULIA_CPU_TARGET=generic;generic,-cx16,clone_all;sandybridge,-xsaveopt,clone_all;haswell,-rdrnd,base(1)")
|
|
("i686-linux" "MARCH=pentium4")
|
|
("armhf-linux" "JULIA_CPU_TARGET=armv7-a,neon")
|
|
("powerpc64le-linux" "JULIA_CPU_TARGET=pwr8")
|
|
;; Prevent errors when querying this package on unsupported
|
|
;; platforms, e.g. when running "guix package --search="
|
|
;; and also of targeting the builder's architecture.
|
|
(_ "JULIA_CPU_TARGET=generic"))
|
|
|
|
"CONFIG_SHELL=bash -x" ; needed to build bundled libraries
|
|
"USE_BINARYBUILDER=0"
|
|
;; list (and order!) of "USE_SYSTEM_*" is here:
|
|
;; https://github.com/JuliaLang/julia/blob/v1.6.0/Make.inc
|
|
"USE_SYSTEM_CSL=1"
|
|
"USE_SYSTEM_LLVM=1"
|
|
"USE_SYSTEM_LIBUNWIND=1"
|
|
"USE_SYSTEM_PCRE=1"
|
|
"USE_SYSTEM_OPENLIBM=1"
|
|
"USE_SYSTEM_DSFMT=1"
|
|
"USE_SYSTEM_BLAS=1"
|
|
"USE_SYSTEM_LAPACK=1"
|
|
"USE_SYSTEM_GMP=1"
|
|
"USE_SYSTEM_MPFR=1"
|
|
"USE_SYSTEM_SUITESPARSE=1"
|
|
"USE_SYSTEM_LIBUV=1"
|
|
"USE_SYSTEM_UTF8PROC=1"
|
|
"USE_SYSTEM_MBEDTLS=1"
|
|
"USE_SYSTEM_LIBSSH2=1"
|
|
"USE_SYSTEM_NGHTTP2=1"
|
|
"USE_SYSTEM_CURL=1"
|
|
"USE_SYSTEM_LIBGIT2=1"
|
|
"USE_SYSTEM_PATCHELF=1"
|
|
"USE_SYSTEM_ZLIB=1"
|
|
"USE_SYSTEM_P7ZIP=1"
|
|
|
|
"NO_GIT=1" ; build from release tarball.
|
|
"USE_BLAS64=0" ; needed when USE_SYSTEM_BLAS=1
|
|
"LIBBLAS=-lopenblas"
|
|
"LIBBLASNAME=libopenblas"
|
|
|
|
(string-append "SUITESPARSE_INC=-I "
|
|
(assoc-ref %build-inputs "suitesparse")
|
|
"/include")
|
|
"USE_GPL_LIBS=1" ; proudly
|
|
(string-append "UTF8PROC_INC="
|
|
(assoc-ref %build-inputs "utf8proc")
|
|
"/include")
|
|
"LLVM_VER=11.0.0"
|
|
|
|
"USE_LLVM_SHLIB=1"
|
|
(string-append "LIBUV="
|
|
(assoc-ref %build-inputs "libuv")
|
|
"/lib/libuv.so")
|
|
(string-append "LIBUV_INC="
|
|
(assoc-ref %build-inputs "libuv")
|
|
"/include"))))
|
|
(inputs
|
|
`(("coreutils" ,coreutils) ; for bindings to "mkdir" and the like
|
|
("curl" ,curl-ssh)
|
|
("gfortran" ,gfortran)
|
|
;; required for libgcc_s.so
|
|
("gfortran:lib" ,gfortran "lib")
|
|
("gmp" ,gmp)
|
|
("lapack" ,lapack)
|
|
("libgit2" ,libgit2-1.1)
|
|
("libnghttp2" ,nghttp2 "lib")
|
|
("libssh2" ,libssh2)
|
|
("libunwind" ,libunwind-julia)
|
|
("libuv" ,libuv-julia)
|
|
("llvm" ,llvm-julia)
|
|
("mbedtls" ,mbedtls-apache)
|
|
("mpfr" ,mpfr)
|
|
("openblas" ,openblas)
|
|
("openlibm" ,openlibm)
|
|
("p7zip" ,p7zip)
|
|
("pcre2" ,pcre2)
|
|
("suitesparse" ,suitesparse)
|
|
("utf8proc" ,utf8proc-2.6.1)
|
|
("wget" ,wget)
|
|
("which" ,which)
|
|
("zlib" ,zlib)
|
|
;; Find dependencies versions here:
|
|
;; https://raw.githubusercontent.com/JuliaLang/julia/v1.6.0/deps/Versions.make
|
|
("dsfmt" ,dsfmt)
|
|
("libwhich" ,libwhich)))
|
|
(native-inputs
|
|
`(("openssl" ,openssl)
|
|
("perl" ,perl)
|
|
("patchelf" ,patchelf)
|
|
("pkg-config" ,pkg-config)
|
|
("python" ,python-2)))
|
|
(native-search-paths
|
|
(list (search-path-specification
|
|
(variable "JULIA_LOAD_PATH")
|
|
(files (list "share/julia/loadpath/")))
|
|
(search-path-specification
|
|
(variable "JULIA_DEPOT_PATH")
|
|
(files (list "share/julia/")))))
|
|
;; Julia is not officially released for ARM and MIPS.
|
|
;; See https://github.com/JuliaLang/julia/issues/10639
|
|
(supported-systems '("i686-linux" "x86_64-linux" "aarch64-linux"))
|
|
(home-page "https://julialang.org/")
|
|
(synopsis "High-performance dynamic language for technical computing")
|
|
(description
|
|
"Julia is a high-level, high-performance dynamic programming language for
|
|
technical computing, with syntax that is familiar to users of other technical
|
|
computing environments. It provides a sophisticated compiler, distributed
|
|
parallel execution, numerical accuracy, and an extensive mathematical function
|
|
library.")
|
|
(license license:expat)))
|