532 lines
20 KiB
Scheme
532 lines
20 KiB
Scheme
;;; GNU Guix --- Functional package management for GNU
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;;; Copyright © 2015, 2017, 2019 Ricardo Wurmus <rekado@elephly.net>
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;;; Copyright © 2016 Lukas Gradl <lgradl@openmailbox.org>
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;;; Copyright © 2016 David Craven <david@craven.ch>
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;;; Copyright © 2016 Marius Bakke <mbakke@fastmail.com>
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;;; Copyright © 2016, 2018, 2019 Efraim Flashner <efraim@flashner.co.il>
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;;; Copyright © 2017 Corentin Bocquillon <corentin@nybble.fr>
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;;; Copyright © 2017 Gregor Giesen <giesen@zaehlwerk.net>
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;;; Copyright © 2017 Frederick M. Muriithi <fredmanglis@gmail.com>
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;;; Copyright © 2017 ng0 <ng0@n0.is>
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;;; Copyright © 2017, 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
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;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com>
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;;;
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;;; This file is part of GNU Guix.
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;;;
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;;; GNU Guix is free software; you can redistribute it and/or modify it
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;;; under the terms of the GNU General Public License as published by
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;;; the Free Software Foundation; either version 3 of the License, or (at
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;;; your option) any later version.
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;;;
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;;; GNU Guix is distributed in the hope that it will be useful, but
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;;; WITHOUT ANY WARRANTY; without even the implied warranty of
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;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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;;; GNU General Public License for more details.
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;;;
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;;; You should have received a copy of the GNU General Public License
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;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
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(define-module (gnu packages serialization)
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#:use-module ((guix licenses) #:prefix license:)
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#:use-module (guix packages)
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#:use-module (guix download)
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#:use-module (guix git-download)
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#:use-module (guix utils)
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#:use-module (guix build-system cmake)
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#:use-module (guix build-system gnu)
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#:use-module (guix build-system python)
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#:use-module (gnu packages)
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#:use-module (gnu packages autotools)
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#:use-module (gnu packages boost)
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#:use-module (gnu packages check)
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#:use-module (gnu packages compression)
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#:use-module (gnu packages databases)
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#:use-module (gnu packages documentation)
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#:use-module (gnu packages gcc)
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#:use-module (gnu packages lua)
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#:use-module (gnu packages pkg-config)
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#:use-module (gnu packages python)
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#:use-module (gnu packages python-xyz)
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#:use-module (gnu packages perl))
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(define-public cereal
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(package
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(name "cereal")
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(version "1.2.1")
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(source (origin
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(method url-fetch)
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(uri (string-append "https://github.com/USCiLab/cereal/archive/v"
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version ".tar.gz"))
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(file-name (string-append name "-" version ".tar.gz"))
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(sha256
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(base32
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"0kj32h3j2128anig0g9gzw82kfyd5xqfkwq6vdyv900jx8i1qckx"))))
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(build-system cmake-build-system)
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(arguments
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`(;; The only included tests are portability tests requiring
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;; cross-compilation and boost. Since we are building cereal on more
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;; platforms anyway, there is no compelling reason to build the tests.
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#:tests? #f
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#:out-of-source? #f
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#:phases
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(modify-phases %standard-phases
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(delete 'configure)
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(replace 'build
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(lambda _
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(substitute* "doc/doxygen.in"
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(("@CMAKE_CURRENT_SOURCE_DIR@") "."))
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(invoke "doxygen" "doc/doxygen.in")
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#t))
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;; There is no "install" target, so we have to provide our own
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;; "install" phase.
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(replace 'install
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(lambda* (#:key outputs #:allow-other-keys)
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(let* ((out (assoc-ref outputs "out"))
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(doc (string-append out "/share/cereal/docs"))
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(include (string-append out "/include/cereal")))
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(mkdir-p doc)
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(mkdir-p include)
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(copy-recursively "include/cereal" include)
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(copy-recursively "doc/html" doc))
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#t)))))
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(native-inputs
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`(("doxygen" ,doxygen)))
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(home-page "http://uscilab.github.io/cereal/")
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(synopsis "C++11 library for serialization")
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(description
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"Cereal is a header-only C++11 serialization library. Cereal takes
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arbitrary data types and reversibly turns them into different representations,
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such as compact binary encodings, XML, or JSON.")
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(license license:bsd-3)))
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(define-public msgpack
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(package
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(name "msgpack")
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(version "1.4.2")
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(source
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(origin
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(method url-fetch)
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(uri
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(string-append
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"https://github.com/msgpack/msgpack-c/releases/download/"
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"cpp-" version "/msgpack-" version ".tar.gz"))
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(snippet
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'(let ((p (open-file "msgpack.pc.in" "a")))
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(display
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(string-append "Requires: " "zlib" "\n") p)
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(close-output-port p)
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#t))
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(sha256
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(base32
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"18hzmyfg3mvnp7ab03nqdzzvqagkl42gygjpi4zv4i7aca2dmwf0"))))
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(build-system gnu-build-system)
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(native-inputs
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`(("googletest" ,googletest)
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("autoconf" ,autoconf)
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("automake" ,automake)
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("libtool" ,libtool)
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("pkg-config" ,pkg-config)))
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(propagated-inputs
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`(("zlib" ,zlib))) ;; Msgpack installs two headers (zbuffer.h,
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;; zbuffer.hpp) which #include <zlib.h>. However, 'guix gc --references'
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;; does not detect a store reference to zlib since these headers are not
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;; compiled.
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(home-page "https://www.msgpack.org")
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(synopsis "Binary serialization library")
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(description "Msgpack is a library for C/C++ that implements binary
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serialization.")
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(license license:boost1.0)))
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(define-public libmpack
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(package
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(name "libmpack")
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(version "1.0.5")
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(source
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(origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/tarruda/libmpack.git")
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(commit version)))
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(file-name (git-file-name name version))
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(sha256
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(base32 "0rai5djdkjz7bsn025k5489in7r1amagw1pib0z4qns6b52kiar2"))))
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(build-system gnu-build-system)
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(arguments
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`(#:test-target "test"
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#:make-flags
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(list "CC=gcc"
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(string-append "PREFIX=" (assoc-ref %outputs "out")))
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#:phases
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(modify-phases %standard-phases
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(delete 'configure))))
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(native-inputs
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`(("libtool" ,libtool)))
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(home-page "https://github.com/tarruda/libmpack")
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(synopsis "Small binary serialization library")
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(description "Libmpack is a small binary serialization and RPC library
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that implements both the msgpack and msgpack-rpc specifications.")
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(license license:expat)))
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(define-public lua-libmpack
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(package (inherit libmpack)
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(name "lua-libmpack")
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(version "1.0.8")
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(source
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(origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/libmpack/libmpack-lua.git")
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(commit version)))
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(file-name (git-file-name name version))
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(sha256
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(base32 "1ijvzgq5hvib03w5rghv31wi7byamwg7qdx5pawvhvnflaii8ivw"))))
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(build-system gnu-build-system)
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(arguments
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`(;; FIXME: tests require "busted", which is not yet available in Guix.
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#:tests? #f
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#:test-target "test"
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#:make-flags
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(let* ((lua-version ,(package-version lua))
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(lua-major+minor ,(version-major+minor (package-version lua))))
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(list "CC=gcc"
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"FETCH=echo" ; don't fetch anything from the web
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"UNTGZ=echo" ; and don't try to unpack it
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"USE_SYSTEM_LUA=yes"
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(string-append "MPACK_LUA_VERSION=" lua-version)
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(string-append "MPACK_LUA_VERSION_NOPATCH=" lua-major+minor)
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(string-append "PREFIX="
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(assoc-ref %outputs "out"))
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(string-append "LUA_CMOD_INSTALLDIR="
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(assoc-ref %outputs "out")
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"/lib/lua/" lua-major+minor)))
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#:phases
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(modify-phases %standard-phases
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(delete 'configure)
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(add-after 'unpack 'unpack-mpack-sources
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(lambda* (#:key inputs #:allow-other-keys)
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;; This is broken because mpack-src is not a file, but all
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;; prerequisites are added to the inputs of the gcc invocation.
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(substitute* "Makefile"
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(("\\$\\(MPACK\\): mpack-src") "$(MPACK): "))
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(copy-recursively (assoc-ref inputs "libmpack")
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"mpack-src")
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#t)))))
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(inputs
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`(("lua" ,lua)))
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(native-inputs
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`(("pkg-config" ,pkg-config)
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("libmpack" ,(package-source libmpack))))
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(home-page "https://github.com/libmpack/libmpack-lua")
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(synopsis "Lua bindings for the libmpack binary serialization library")))
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(define-public lua5.1-libmpack
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(package (inherit lua-libmpack)
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(name "lua5.1-libmpack")
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(arguments
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(substitute-keyword-arguments (package-arguments lua-libmpack)
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((#:make-flags flags)
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`(let* ((lua-version ,(package-version lua-5.1))
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(lua-major+minor ,(version-major+minor (package-version lua-5.1))))
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(list "CC=gcc"
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"USE_SYSTEM_LUA=yes"
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(string-append "MPACK_LUA_VERSION=" lua-version)
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(string-append "MPACK_LUA_VERSION_NOPATCH=" lua-major+minor)
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(string-append "PREFIX="
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(assoc-ref %outputs "out"))
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(string-append "LUA_CMOD_INSTALLDIR="
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(assoc-ref %outputs "out")
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"/lib/lua/" lua-major+minor))))))
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(inputs
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`(("lua" ,lua-5.1)))))
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(define-public lua5.2-libmpack
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(package (inherit lua-libmpack)
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(name "lua5.2-libmpack")
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(arguments
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(substitute-keyword-arguments (package-arguments lua-libmpack)
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((#:make-flags flags)
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`(let* ((lua-version ,(package-version lua-5.2))
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(lua-major+minor ,(version-major+minor (package-version lua-5.2))))
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(list "CC=gcc"
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"USE_SYSTEM_LUA=yes"
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(string-append "MPACK_LUA_VERSION=" lua-version)
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(string-append "MPACK_LUA_VERSION_NOPATCH=" lua-major+minor)
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(string-append "PREFIX="
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(assoc-ref %outputs "out"))
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(string-append "LUA_CMOD_INSTALLDIR="
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(assoc-ref %outputs "out")
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"/lib/lua/" lua-major+minor))))))
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(inputs
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`(("lua" ,lua-5.2)))))
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(define-public yaml-cpp
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(package
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(name "yaml-cpp")
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(version "0.6.2")
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(source (origin
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(method url-fetch)
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(uri (string-append
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"https://github.com/jbeder/yaml-cpp/archive/"
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"yaml-cpp-" version ".tar.gz"))
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(sha256
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(base32
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"01gxn7kc8pzyh4aadjxxzq8cignmbwmm9rfrsmgqfg9w2q75dn74"))))
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(build-system cmake-build-system)
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(arguments
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'(#:configure-flags '("-DBUILD_SHARED_LIBS=ON")
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#:phases
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(modify-phases %standard-phases
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(add-after 'install 'dont-install-gtest-libraries
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(lambda* (#:key outputs #:allow-other-keys)
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(let ((out (assoc-ref outputs "out")))
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(with-directory-excursion
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(string-append out "/include")
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(delete-file-recursively "gtest")
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(delete-file-recursively "gmock"))
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(with-directory-excursion
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(string-append out "/lib")
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(for-each (lambda (file)
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(delete-file file))
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'("libgmock.so" "libgmock_main.so"
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"libgtest.so" "libgtest_main.so"))))
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#t)))))
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(native-inputs
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`(("python" ,python)))
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(home-page "https://github.com/jbeder/yaml-cpp")
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(synopsis "YAML parser and emitter in C++")
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(description "YAML parser and emitter in C++ matching the YAML 1.2 spec.")
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(license license:bsd-3)))
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(define-public jsoncpp
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(package
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(name "jsoncpp")
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(version "1.9.1")
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(home-page "https://github.com/open-source-parsers/jsoncpp")
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(source (origin
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(method git-fetch)
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(uri (git-reference (url home-page) (commit version)))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"00g356iv3kcp0gadj7gbyzf9jn9avvx9vxbxc7c2i5nnry8z72wj"))))
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(build-system cmake-build-system)
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(arguments
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`(#:configure-flags '("-DBUILD_SHARED_LIBS:BOOL=YES")))
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(synopsis "C++ library for interacting with JSON")
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(description "JsonCpp is a C++ library that allows manipulating JSON values,
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including serialization and deserialization to and from strings. It can also
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preserve existing comment in unserialization/serialization steps, making
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it a convenient format to store user input files.")
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(license license:expat)))
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;; Tensorflow does not build with jsoncpp 1.8.x. It is built with commit
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;; 4356d9bba191e1e16ce7a92073cbf3e63564e973, which lies between version 1.7.2
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;; and 1.7.3.
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(define-public jsoncpp-for-tensorflow
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(package (inherit jsoncpp)
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(name "jsoncpp")
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(version "1.7.3")
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/open-source-parsers/jsoncpp.git")
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(commit version)))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"1180ln8blrb0mwzpcf78k49hlki6di65q77rsvglf83kfcyh4d7z"))))))
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(define-public capnproto
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(package
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(name "capnproto")
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(version "0.7.0")
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(source (origin
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(method url-fetch)
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(uri (string-append
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"https://capnproto.org/capnproto-c++-"
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version ".tar.gz"))
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(sha256
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(base32
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"0hfdnhlbskagzgvby8wy6lrxj53zfzpfqimbhga68c0ji2yw1969"))))
|
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(build-system gnu-build-system)
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||
(arguments
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`(#:phases
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||
(modify-phases %standard-phases
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(add-before 'check 'do-not-require-/etc/services
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(lambda _
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;; Workaround for test that tries to resolve port name from
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;; /etc/services, which is not present in build environment.
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(substitute* "src/kj/async-io-test.c++" ((":http") ":80"))
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#t))
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(add-before 'check 'use-tmp-for-tempory-files
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(lambda _
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;; Use /tmp for tempory files, as the default /var/tmp directory
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;; doesn't exist.
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(substitute* "src/kj/filesystem-disk-test.c++"
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(("VAR\\_TMP \"/var/tmp\"")
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"VAR_TMP \"/tmp\""))
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||
#t)))))
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||
(home-page "https://capnproto.org")
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||
(synopsis "Capability-based RPC and serialization system")
|
||
(description
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||
"Cap'n Proto is a very fast data interchange format and capability-based
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RPC system. Think JSON, except binary. Or think Protocol Buffers, except faster.")
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||
(license license:expat)))
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(define-public libbson
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||
(package
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||
(name "libbson")
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||
(version "1.6.2")
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||
(source
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||
(origin
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||
(method url-fetch)
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||
(uri (string-append "https://github.com/mongodb/libbson/releases/"
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||
"download/" version "/libbson-" version ".tar.gz"))
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||
(sha256
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||
(base32
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"1fj4554msq0rrz14snbj908dzqj46gh7jg9w9j0akn2b7q911m5a"))))
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||
(build-system gnu-build-system)
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||
(native-inputs `(("perl" ,perl)))
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||
(home-page "http://mongoc.org/libbson/current/index.html")
|
||
(synopsis "C BSON library")
|
||
(description "Libbson can create and parse BSON documents. It can also
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convert JSON documents to BSON and the opposite. BSON stands for Binary JSON,
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it is comparable to protobuf.")
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||
(license license:asl2.0)))
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||
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(define-public nlohmann-json-cpp
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||
(package
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||
(name "nlohmann-json-cpp")
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(version "3.7.0")
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||
(source (origin
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||
(method git-fetch)
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||
(uri (git-reference
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||
(url "https://github.com/nlohmann/json.git")
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||
(commit (string-append "v" version))))
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||
(file-name (git-file-name name version))
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||
(sha256
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||
(base32
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||
"0v7xih4zjixxxfvkfbs7a8j9qcvpwlsv4vrkbyns3hc7b44nb8ap"))))
|
||
(build-system cmake-build-system)
|
||
(native-inputs
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||
;; Integer overflow tests like those from
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||
;; <https://github.com/nlohmann/json/issues/1447> fail when building with
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||
;; gcc@5. Thus, build with a newer GCC.
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||
`(("gcc" ,gcc-9)))
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||
(arguments
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||
'(#:phases (modify-phases %standard-phases
|
||
(add-before 'build 'unset-path-variables
|
||
(lambda _
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||
(unsetenv "C_INCLUDE_PATH")
|
||
(unsetenv "CPLUS_INCLUDE_PATH")
|
||
#t)))))
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(home-page "https://nlohmann.github.io/json/")
|
||
(synopsis "JSON library for C++")
|
||
(description
|
||
"JSON library for C++ trying to accomplish “Intuitive syntax”,
|
||
“Trivial integration”, and “Serious testing”.
|
||
However, “Memory efficiency” and “Speed” have not been primary goals.")
|
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(license license:expat)))
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||
|
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(define-public python-ruamel.yaml
|
||
(package
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||
(name "python-ruamel.yaml")
|
||
(version "0.15.83")
|
||
(source
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||
(origin
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||
(method url-fetch)
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||
(uri (pypi-uri "ruamel.yaml" version))
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||
(sha256
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||
(base32
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"0p4i8ad28cbbbjja8b9274irkhnphhvhap3aym6yb8xfp1d72kpw"))))
|
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(build-system python-build-system)
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(native-inputs
|
||
`(("python-pytest" ,python-pytest)))
|
||
(arguments
|
||
`(;; TODO: Tests require packaging "ruamel.std.pathlib".
|
||
#:tests? #f))
|
||
(home-page "https://bitbucket.org/ruamel/yaml")
|
||
(synopsis "YAML 1.2 parser/emitter")
|
||
(description
|
||
"This package provides YAML parser/emitter that supports roundtrip
|
||
preservation of comments, seq/map flow style, and map key order. It
|
||
is a derivative of Kirill Simonov’s PyYAML 3.11. It supports YAML 1.2
|
||
and has round-trip loaders and dumpers. It supports comments. Block
|
||
style and key ordering are kept, so you can diff the source.")
|
||
(license license:expat)))
|
||
|
||
(define-public python2-ruamel.yaml
|
||
(package-with-python2 python-ruamel.yaml))
|
||
|
||
(define-public python-cbor
|
||
(package
|
||
(name "python-cbor")
|
||
(version "1.0.0")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "cbor" version))
|
||
(sha256
|
||
(base32
|
||
"1dmv163cnslyqccrybkxn0c9s1jk1mmafmgxv75iamnz5lk5l8hk"))))
|
||
(build-system python-build-system)
|
||
(home-page "https://bitbucket.org/bodhisnarkva/cbor")
|
||
(synopsis "Implementation of the Concise Binary Object Representation")
|
||
(description
|
||
"Python-cbor provides an implementation of the Concise Binary Object
|
||
Representation (@dfn{CBOR}). CBOR is comparable to JSON, has a superset of
|
||
JSON's ability, but serializes to a binary format which is smaller and faster
|
||
to generate and parse. The two primary functions are @code{cbor.loads} and
|
||
@code{cbor.dumps}.")
|
||
(license license:asl2.0)))
|
||
|
||
(define-public flatbuffers
|
||
(package
|
||
(name "flatbuffers")
|
||
(version "1.10.0")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://github.com/google/flatbuffers/archive/v"
|
||
version ".tar.gz"))
|
||
(file-name (string-append name "-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"0z4swldxs0s31hnkqdhsbfmc8vx3p7zsvmqaw4l31r2iikdy651p"))))
|
||
(build-system cmake-build-system)
|
||
(arguments
|
||
'(#:build-type "Release"
|
||
#:configure-flags
|
||
(list (string-append "-DCMAKE_INSTALL_LIBDIR="
|
||
(assoc-ref %outputs "out") "/lib"))))
|
||
(home-page "https://google.github.io/flatbuffers/")
|
||
(synopsis "Memory-efficient serialization library")
|
||
(description "FlatBuffers is a cross-platform serialization library for C++,
|
||
C#, C, Go, Java, JavaScript, PHP, and Python. It was originally created for
|
||
game development and other performance-critical applications.")
|
||
(license license:asl2.0)))
|
||
|
||
(define-public python-feather-format
|
||
(package
|
||
(name "python-feather-format")
|
||
(version "0.4.0")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "feather-format" version))
|
||
(sha256
|
||
(base32
|
||
"1adivm5w5ji4qv7hq7942vqlk8l2wgw87bdlsia771z14z3zp857"))))
|
||
(build-system python-build-system)
|
||
(propagated-inputs
|
||
`(("python-pandas" ,python-pandas)
|
||
("python-pyarrow" ,python-pyarrow)))
|
||
(home-page "https://github.com/wesm/feather")
|
||
(synopsis "Python wrapper to the Feather file format")
|
||
(description "This package provides a Python wrapper library to the
|
||
Apache Arrow-based Feather binary columnar serialization data frame format.")
|
||
(license license:asl2.0)))
|
||
|
||
(define-public python2-feather-format
|
||
(package-with-python2 python-feather-format))
|