534 lines
23 KiB
Scheme
534 lines
23 KiB
Scheme
;;; GNU Guix --- Functional package management for GNU
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;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021 Ludovic Courtès <ludo@gnu.org>
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;;; Copyright © 2015 Eric Bavier <bavier@member.fsf.org>
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;;; Copyright © 2016-2024 Nicolas Goaziou <mail@nicolasgoaziou.fr>
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;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
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;;; Copyright © 2020 Maxim Cournoyer <maxim.cournoyer@gmail.com>
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;;; Copyright © 2022 Antero Mejr <antero@mailbox.org>
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;;; Copyright © 2023 gemmaro <gemmaro.dev@gmail.com>
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;;;
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;;; This file is part of GNU Guix.
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;;;
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;;; GNU Guix is free software; you can redistribute it and/or modify it
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;;; under the terms of the GNU General Public License as published by
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;;; the Free Software Foundation; either version 3 of the License, or (at
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;;; your option) any later version.
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;;;
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;;; GNU Guix is distributed in the hope that it will be useful, but
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;;; WITHOUT ANY WARRANTY; without even the implied warranty of
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;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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;;; GNU General Public License for more details.
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;;;
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;;; You should have received a copy of the GNU General Public License
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;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
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(define-module (gnu packages plotutils)
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#:use-module ((guix licenses) #:prefix license:)
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#:use-module ((guix utils) #:select (target-x86-32?))
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#:use-module (guix build-system cmake)
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#:use-module (guix build-system gnu)
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#:use-module (guix build-system ruby)
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#:use-module (guix download)
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#:use-module (guix gexp)
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#:use-module (guix git-download)
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#:use-module (guix packages)
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#:use-module (gnu packages)
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#:use-module (gnu packages algebra)
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#:use-module (gnu packages autotools)
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#:use-module (gnu packages bash)
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#:use-module (gnu packages bdw-gc)
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#:use-module (gnu packages bison)
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#:use-module (gnu packages boost)
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#:use-module (gnu packages cmake)
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#:use-module (gnu packages compression)
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#:use-module (gnu packages emacs)
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#:use-module (gnu packages flex)
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#:use-module (gnu packages ghostscript)
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#:use-module (gnu packages gl)
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#:use-module (gnu packages gtk)
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#:use-module (gnu packages guile)
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#:use-module (gnu packages image)
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#:use-module (gnu packages maths)
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#:use-module (gnu packages onc-rpc)
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#:use-module (gnu packages perl)
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#:use-module (gnu packages pkg-config)
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#:use-module (gnu packages python)
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#:use-module (gnu packages python-xyz)
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#:use-module (gnu packages qt)
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#:use-module (gnu packages readline)
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#:use-module (gnu packages ruby)
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#:use-module (gnu packages statistics)
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#:use-module (gnu packages tex)
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#:use-module (gnu packages texinfo)
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#:use-module (gnu packages web)
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#:use-module (gnu packages wxwidgets)
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#:use-module (gnu packages xorg))
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(define-public asymptote
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(package
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(name "asymptote")
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(version "2.90")
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(source
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(origin
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(method url-fetch)
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(uri (string-append "mirror://sourceforge/asymptote/"
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version "/asymptote-" version ".src.tgz"))
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(sha256
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(base32 "0h3kf0jajn67izpg6h1bi50qrsdslr7mnacp4j7lmx4bh3xmcscc"))
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(modules '((guix build utils)))
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(snippet
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;; Remove bundled RapidJSON.
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#~(begin
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(delete-file-recursively "LspCpp/third_party/rapidjson")))))
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(build-system gnu-build-system)
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;; Note: The 'asy' binary retains a reference to docdir for use with its
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;; "help" command in interactive mode, so adding a "doc" output is not
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;; currently useful.
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(native-inputs
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(list autoconf
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automake
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bison
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boost
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cmake
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emacs-minimal
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flex
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ghostscript ;for tests
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perl
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pkg-config
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rapidjson
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texinfo ;for generating documentation
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(texlive-updmap.cfg
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(list texlive-epsf
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texlive-etoolbox
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texlive-hypdoc
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texlive-infwarerr
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texlive-kvdefinekeys
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texlive-kvoptions
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texlive-media9
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texlive-ocgx2
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texlive-parskip
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texlive-pdftexcmds
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texlive-texinfo
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texlive-type1cm))))
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(inputs
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(list bash-minimal
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eigen
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fftw
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freeglut
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glew
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glm
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gsl
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libgc
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libtirpc
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python
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python-cson
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python-numpy
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python-pyqt
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readline
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zlib))
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(arguments
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(list
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#:modules '((guix build emacs-utils)
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(guix build gnu-build-system)
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(guix build utils)
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(srfi srfi-26))
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#:imported-modules `(,@%gnu-build-system-modules
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(guix build emacs-utils))
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#:configure-flags
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#~(list (string-append "--enable-gc=" #$(this-package-input "libgc"))
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(string-append "--with-latex=" #$output "/share/texmf/tex/latex")
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(string-append "--with-context="
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#$output
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"/share/texmf/tex/context/third"))
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'unpack 'locate-tirpc
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(lambda* (#:key inputs #:allow-other-keys)
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(substitute* (list "configure.ac")
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(("/usr/include/tirpc")
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(search-input-directory inputs "include/tirpc")))))
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(add-after 'unpack 'unbundle-rapidjson
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(lambda* (#:key inputs #:allow-other-keys)
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(substitute* (list "Makefile.in")
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(("\\$\\(CMAKE\\)" all)
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(string-append all " -DUSE_SYSTEM_RAPIDJSON=ON")))))
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(add-after 'unpack 'fix-includes
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(lambda _
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(substitute* (find-files "." "\\.in$")
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(("#include <primitives.h>") "#include \"primitives.h\""))
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(substitute* (find-files "prc" "\\.h$")
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(("#include \"config.h\"") "#include \"../config.h\""))
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(substitute* "prc/oPRCFile.h"
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(("#include \"xstream.h\"") "#include \"../xstream.h\""))
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(substitute* "v3dfile.h"
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(("#include <prc/oPRCFile.h>") "#include \"prc/oPRCFile.h\""))
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(substitute* "LspCpp/src/lsp/ParentProcessWatcher.cpp"
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(("#include <boost/process.hpp>" all)
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(string-append "#include <algorithm>\n" all)))))
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(replace 'bootstrap
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(lambda _
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(invoke "autoreconf" "-vfi")))
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(add-after 'unpack 'move-info-location
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;; Build process installs info file in the unusual
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;; "%out/share/info/asymptote/" location. Move it to
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;; "%out/share/info/" so it appears in the top-level directory.
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(lambda _
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(substitute* "doc/png/Makefile.in"
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(("(\\$\\(infodir\\))/asymptote" _ infodir) infodir))
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(substitute* "doc/asymptote.texi"
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(("asymptote/asymptote") "asymptote"))))
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(add-before 'build 'patch-pdf-viewer
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(lambda _
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;; Default to a free pdf viewer.
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(substitute* "settings.cc"
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(("defaultPDFViewer=\"acroread\"")
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"defaultPDFViewer=\"gv\""))))
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(add-before 'check 'set-HOME
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;; Some tests require write access to $HOME, otherwise leading to
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;; "failed to create directory /homeless-shelter/.asy" error.
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(lambda _
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(setenv "HOME" "/tmp")))
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(add-after 'install 'install-Emacs-data
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(lambda _
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;; Install related Emacs libraries into an appropriate location.
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(let ((lisp-dir
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(string-append #$output "/share/emacs/site-lisp")))
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(for-each (cut install-file <> lisp-dir)
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(find-files "." "\\.el$"))
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(emacs-generate-autoloads #$name lisp-dir))))
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(add-after 'install-Emacs-data 'wrap-python-script
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(lambda* (#:key inputs outputs #:allow-other-keys)
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;; Make sure 'xasy' runs with the correct PYTHONPATH.
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(let ((path (getenv "GUIX_PYTHONPATH")))
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(wrap-program
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(string-append #$output "/share/asymptote/GUI/xasy.py")
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`("GUIX_PYTHONPATH" ":" prefix (,path)))))))))
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(home-page "https://asymptote.sourceforge.io")
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(synopsis "Script-based vector graphics language")
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(description
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"Asymptote is a powerful descriptive vector graphics language for
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technical drawing, inspired by MetaPost but with an improved C++-like syntax.
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Asymptote provides for figures the same high-quality level of typesetting that
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LaTeX does for scientific text.")
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;; Most source files do not contain license statements, but the README
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;; contains: "All source files in the Asymptote project, unless explicitly
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;; noted otherwise, are released under version 3 (or later) of the GNU
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;; Lesser General Public License"
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(license license:lgpl3+)))
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(define-public guile-charting
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;; This commit fixes a few things, including Guile 3 support, not available
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;; in the latest release.
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(let ((commit "75f755b691a9f712f3b956657d01805d6a8a1b98")
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(revision "1"))
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(package
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(name "guile-charting")
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(version (git-version "0.2.0" revision commit))
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://gitlab.com/wingo/guile-charting")
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(commit commit)))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"03049g7wnpyfi0r36ij4a46kc9l45jbanx02iklkjwav2n6jqnnk"))))
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(build-system gnu-build-system)
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(native-inputs
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(list autoconf automake texinfo pkg-config))
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(inputs (list guile-3.0))
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(propagated-inputs (list guile-cairo))
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(home-page "https://wingolog.org/projects/guile-charting/")
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(synopsis "Create charts and graphs in Guile")
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(description
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"Guile-Charting is a Guile Scheme library to create bar charts and graphs
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using the Cairo drawing library.")
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(license license:lgpl2.1+))))
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(define-public guile-plotutils
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(package
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(name "guile-plotutils")
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(version "1.0.1")
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(source (origin
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(method url-fetch)
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(uri (list (string-append "https://lonelycactus.com/tarball/"
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"guile_plotutils-" version ".tar.gz")
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(string-append
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"https://github.com/spk121/guile-plotutils/releases/download/v"
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version "/guile_plotutils-" version
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".tar.gz")))
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(sha256
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(base32
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"0r245z75cdzgzi57fpz84mnyrjq44793zzaaxxrszyxm1d06hc6r"))))
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(build-system gnu-build-system)
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(arguments
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`(#:imported-modules ((guix build guile-build-system)
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,@%gnu-build-system-modules)
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#:modules (((guix build guile-build-system)
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#:select (target-guile-effective-version))
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(guix build gnu-build-system)
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(guix build utils))
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#:phases
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(modify-phases %standard-phases
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(add-before 'install 'set-library-file-name
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(lambda* (#:key outputs #:allow-other-keys)
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(let ((out (assoc-ref outputs "out"))
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(version (target-guile-effective-version)))
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;; First install libguile-plotutils.so.
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(invoke "make" "install-guileextensionLTLIBRARIES")
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;; Then change source files to refer to it.
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(substitute* '("module/plotutils/graph.scm"
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"module/plotutils/plot.scm")
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(("\"libguile-plotutils\"")
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(string-append "\"" out "/lib/guile/" version
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"/extensions/libguile-plotutils\"")))))))))
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(native-inputs (list pkg-config texinfo))
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(inputs (list plotutils guile-3.0 zlib))
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(home-page "https://lonelycactus.com/guile-plotutils.html")
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(synopsis "Guile bindings to the GNU Plotutils plotting libraries")
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(description
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"Guile-Plotutils is a Guile binding to the venerable GNU Plotutils
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plotting and graphing library. If you want to make graphs that look like you
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went to university in the 1990s, this is the library for you.")
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(license license:gpl3+)))
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(define-public guile2.2-charting
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(package
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(inherit guile-charting)
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(name "guile2.2-charting")
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(inputs (list guile-2.2))
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(propagated-inputs (list guile2.2-cairo))))
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(define-public ploticus
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(package
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(name "ploticus")
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(version "2.42")
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(source (origin
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(method url-fetch)
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(uri (string-append "mirror://sourceforge/ploticus/ploticus/"
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version "/ploticus242_src.tar.gz"))
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(sha256
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(base32
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"1c70cvfvgjh83hj1x21130wb9qfr2rc0x47cxy9kl805yjwy8a9z"))
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(modules '((guix build utils)))
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(snippet
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;; Install binaries in the right place.
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#~(begin
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(substitute* "src/Makefile"
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(("INSTALLBIN =.*$")
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(string-append "INSTALLBIN = $(out)/bin")))))))
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(build-system gnu-build-system)
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(arguments
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(list
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#:tests? #f ; no tests
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#:phases
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#~(modify-phases %standard-phases
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(replace 'configure (lambda _ (chdir "src")))
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(add-before 'install 'make-target-directories
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(lambda _
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(mkdir-p (string-append #$output "/bin"))))
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(add-after 'install 'install-prefabs
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(lambda _
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(let* ((out #$output)
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(dir (string-append out "/share/ploticus/prefabs"))
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(bin (string-append out "/bin")))
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(mkdir-p dir)
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;; Install "prefabs".
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(for-each
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(lambda (file)
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(let ((target (string-append dir "/" (basename file))))
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(copy-file file target)))
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(find-files "../prefabs" "."))
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;; Allow them to be found.
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(wrap-program (string-append bin "/pl")
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`("PLOTICUS_PREFABS" ":" = (,dir)))))))))
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(inputs
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(list libpng libx11 zlib))
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(home-page "https://ploticus.sourceforge.net/")
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(synopsis "Command-line tool for producing plots and charts")
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(description
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"Ploticus is a non-interactive software package for producing plots,
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charts, and graphics from data. Ploticus is good for automated or
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just-in-time graph generation, handles date and time data nicely, and has
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basic statistical capabilities. It allows significant user control over
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colors, styles, options and details.")
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(license license:gpl2+)))
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(define-public plotutils
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(package
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(name "plotutils")
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(version "2.6")
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(source (origin
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(method url-fetch)
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(uri (string-append "mirror://gnu/plotutils/plotutils-"
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version ".tar.gz"))
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(sha256
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(base32
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"1arkyizn5wbgvbh53aziv3s6lmd3wm9lqzkhxb3hijlp1y124hjg"))
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(modules '((guix build utils)))
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(snippet
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;; Force the use of libXaw7 instead of libXaw. When not doing
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;; that, libplot.la ends up containing just "-lXaw" (without
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;; "-L/path/to/Xaw"), due to the fact that there is no
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;; libXaw.la, which forces us to propagate libXaw.
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'(begin
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(substitute* "configure"
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(("-lXaw")
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"-lXaw7"))
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;; Use the `png_jmpbuf' accessor, as recommended since libpng
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;; 1.4.0 (see:
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;; http://www.libpng.org/pub/png/src/libpng-1.2.x-to-1.4.x-summary.txt).
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(substitute* "libplot/z_write.c"
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(("png_ptr->jmpbuf")
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"png_jmpbuf (png_ptr)"))
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#t))
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(patches
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;; The test suite fails on some architectures such as i686 (see:
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;; https://lists.gnu.org/archive/html/bug-plotutils/2016-04/msg00002.html).
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;; The following Debian patch works around it.
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(search-patches "plotutils-spline-test.patch"))))
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(build-system gnu-build-system)
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(arguments
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(list #:configure-flags
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#~(list "--enable-libplotter"
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;; On i686 some tests fail due to excess floating point
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;; precision; work around it. However, libplotter is C++
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;; and thus unaffected by CFLAGS, but '-fexcess-precision'
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;; is not implemented for C++ as of GCC 10.
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#$@(if (target-x86-32?)
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#~("CFLAGS=-g -O2 -fexcess-precision=standard")
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#~()))
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#:phases
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(if (target-x86-32?)
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#~(modify-phases %standard-phases
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(add-before 'check 'skip-sloppy-test
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(lambda _
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;; This test reveals a slight difference in the SVG
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;; output due to floating point inequalities. Skip it.
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(substitute* "test/plot2svg.test"
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(("^exit .*") "exit 77")))))
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#~%standard-phases)))
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(inputs (list libpng libx11 libxt libxaw))
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(home-page "https://www.gnu.org/software/plotutils/")
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(synopsis "Plotting utilities and library")
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(description
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"GNU Plotutils is a package for plotting and working with 2D graphics.
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It includes the C library @code{libplot} and the C++ @code{libplotter} library
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for exporting 2D vector graphics in many file formats. It also has support
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for 2D vector graphics animations. The package also contains command-line
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programs for plotting scientific data.")
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(license license:gpl2+)))
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(define-public plplot
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(package
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(name "plplot")
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(version "5.15.0")
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(source (origin
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(method url-fetch)
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(uri (string-append "mirror://sourceforge/plplot/plplot/"
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version "%20Source/plplot-" version
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".tar.gz"))
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(sha256
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(base32
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"0ywccb6bs1389zjfmc9zwdvdsvlpm7vg957whh6b5a96yvcf8bdr"))
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(modules '((guix build utils)))
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(snippet #~(begin (delete-file-recursively "www")
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(substitute* "CMakeLists.txt"
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(("add_subdirectory\\(www\\)") ""))))))
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(build-system cmake-build-system)
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;; TODO: Review all available options and bindings to enable them or split
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;; in dedicated packages, see Debian's package for inspirations:
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;; <https://salsa.debian.org/science-team/plplot>.
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(arguments
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(list
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#:configure-flags
|
|
#~(list (string-append "-DLIB_DIR=" #$output "/lib")
|
|
"-DBUILD_TEST=TRUE"
|
|
"-DENABLE_wxwidgets=TRUE")))
|
|
(native-inputs (list pkg-config))
|
|
(inputs (list wxwidgets))
|
|
(home-page "http://plplot.org/") ;no HTTPS
|
|
(synopsis "Scientific plotting library with Unicode support")
|
|
(description
|
|
"PLplot is a software package for creating scientific plots which core
|
|
library can be used to create standard x-y plots, semi-log plots, log-log
|
|
plots, contour plots, 3D surface plots, mesh plots, bar charts and pie charts.
|
|
Multiple graphs (of the same or different sizes) may be placed on a single
|
|
page, and multiple pages are allowed for those device formats that support
|
|
them.
|
|
|
|
PLplot has support for plot symbols and text specified by the user in the
|
|
UTF-8 encoding of Unicode. This means for our many Unicode-aware devices that
|
|
plot symbols and text are only limited by the collection of glyphs normally
|
|
available via installed system fonts. Furthermore, a large subset of our
|
|
Unicode-aware devices also support complex text layout (CTL) languages such as
|
|
Arabic, Hebrew, and Indic and Indic-derived CTL scripts such as Devanagari,
|
|
Thai, Lao, and Tibetan. Thus, for these PLplot devices essentially any
|
|
language that is supported by Unicode and installed system fonts can be used
|
|
to label plots.")
|
|
(license (list license:lgpl2.0
|
|
license:gpl2+ ;octave bindings
|
|
license:bsd-2 ;docbook docs
|
|
license:ogl-psi1.0 ;files in data/ss
|
|
license:cc-by-sa3.0 ;examples/Chloe.pgm
|
|
license:expat)))) ;Cmake files
|
|
|
|
(define-public ruby-unicode-plot
|
|
(package
|
|
(name "ruby-unicode-plot")
|
|
(version "0.0.5")
|
|
;; Source at RubyGems.org doesn't have test fixtures.
|
|
(source (origin
|
|
(method git-fetch)
|
|
(uri (git-reference
|
|
(url
|
|
"https://github.com/red-data-tools/unicode_plot.rb")
|
|
(commit (string-append "v" version))))
|
|
(file-name (git-file-name name version))
|
|
(sha256
|
|
(base32
|
|
"0g67brnb7zp1xx9cp1x7bmyxwnvi2i8gplw7p1j7cppzin4kr1vj"))))
|
|
(build-system ruby-build-system)
|
|
(native-inputs (list bundler ruby-rake ruby-test-unit ruby-yard))
|
|
(propagated-inputs (list ruby-enumerable-statistics))
|
|
(synopsis "Library to plot your data by Unicode characters")
|
|
(description "UnicodePlot provides the feature to make charts with Unicode
|
|
characters. Supported charts are: barplot, boxplot, densityplot,
|
|
histogram, lineplot, and scatterplot.")
|
|
(home-page "https://github.com/red-data-tools/unicode_plot.rb")
|
|
(license license:expat)))
|
|
|
|
(define-public youplot
|
|
(package
|
|
(name "youplot")
|
|
(version "0.4.5")
|
|
;; Source at RubyGems.org doesn't have tests.
|
|
(source (origin
|
|
(method git-fetch)
|
|
(uri (git-reference
|
|
(url "https://github.com/red-data-tools/YouPlot")
|
|
(commit (string-append "v" version))))
|
|
(file-name (git-file-name name version))
|
|
(sha256
|
|
(base32
|
|
"1y54apw7hx9mhjnf277w9wayvq954mdnip4dpajhc0qjg2464c2b"))))
|
|
(build-system ruby-build-system)
|
|
(native-inputs (list ruby-rake ruby-simplecov ruby-test-unit))
|
|
(propagated-inputs (list ruby-unicode-plot))
|
|
(synopsis "Command line tool that draw plots on the terminal")
|
|
(description
|
|
"YouPlot is a command line tool that draws plots on the terminal,
|
|
powered by UnicodePlot gem. It provides commands @command{youplot}
|
|
and @command{uplot} (shorthand) are provided, and supports chart types
|
|
of barplot, histogram, lineplot, scatter, density, boxplot, and count.")
|
|
(home-page "https://github.com/red-data-tools/YouPlot")
|
|
(license license:expat)))
|
|
|
|
;;;
|
|
;;; Avoid adding new packages to the end of this file. To reduce the chances
|
|
;;; of a merge conflict, place them above in alphabetic order.
|
|
;;;
|