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guix/gnu/packages
Ricardo Wurmus bb88417fb7
gnu: Add r-rcistarget.
* gnu/packages/bioconductor.scm (r-rcistarget): New variable.
2019-08-15 17:44:25 +02:00
..
aux-files gnu: linux-libre: Update to 5.2. 2019-07-14 15:02:45 -04:00
bootstrap
patches Merge branch 'staging' 2019-08-13 18:51:12 +02:00
abduco.scm
abiword.scm
accessibility.scm
acct.scm
acl.scm
ada.scm
admin.scm gnu: isc-dhcp: Update bundled BIND to 9.11.9. 2019-08-08 17:24:21 -04:00
adns.scm
agda.scm gnu: Remove ghc-parsec, ghc-stm, ghc-text, ghc-xhtml. 2019-08-07 22:05:29 -04:00
aidc.scm
algebra.scm Merge remote-tracking branch 'origin/master' into wip-texlive 2019-08-06 10:07:36 +02:00
android.scm gnu: android-googletest: Downgrade to 1.8.0. 2019-06-25 17:20:19 +02:00
animation.scm
anthy.scm
antivirus.scm
apl.scm gnu: apl: Add pcre support. 2019-06-24 18:59:21 +03:00
apr.scm
arcan.scm
aspell.scm
assembly.scm
astronomy.scm gnu: Add libnova. 2019-07-18 14:02:47 +03:00
attr.scm
audio.scm gnu: faudio: Update to 19.08. 2019-08-06 13:09:23 +02:00
augeas.scm
authentication.scm
autogen.scm
autotools.scm
avahi.scm
avr.scm
axoloti.scm
backup.scm gnu: zstd: Move libraries to separate outputs. 2019-07-22 16:22:22 +02:00
base.scm gnu: Allow building toolchain with non-default libc. 2019-07-16 11:13:15 -04:00
bash.scm gnu: bash-completion: Fix cross-compilation. 2019-06-25 21:34:36 +02:00
batik.scm
bdw-gc.scm
benchmark.scm
bioconductor.scm gnu: Add r-rcistarget. 2019-08-15 17:44:25 +02:00
bioinformatics.scm gnu: freebayes: Simplify and enable tests. 2019-08-09 12:15:26 +02:00
bison.scm
bittorrent.scm gnu: tremc: Update to 0.9.1-0.4d50dab. 2019-08-13 11:03:27 -04:00
boost.scm
bootloaders.scm gnu: u-boot: Fix target/system comparison in 'make-u-boot-package'. 2019-07-17 15:36:04 +02:00
bootstrap.scm gnu: mingw: Add x86_64 support. 2019-08-14 21:29:53 +02:00
build-tools.scm gnu: osc: Update to 0.165.2. 2019-07-16 23:00:10 +02:00
busybox.scm
c.scm
calcurse.scm gnu: calcurse: Update to 4.5.0. 2019-06-25 16:24:11 +02:00
calendar.scm
ccache.scm
cdrom.scm
certs.scm gnu: nss, nss-certs: Update to 3.45. 2019-08-04 13:49:57 +02:00
check.scm Merge branch 'master' into staging 2019-07-02 20:14:23 +02:00
chemistry.scm
chez.scm
chromium.scm gnu: ungoogled-chromium: Update to 76.0.3809.100-0.8eba5c0 [security fixes]. 2019-08-12 01:50:43 +02:00
ci.scm gnu: Explicitly refer to 'guile-json-1' when needed. 2019-07-25 00:18:45 +02:00
cinnamon.scm
clojure.scm
cluster.scm
cmake.scm
cobol.scm
code.scm
commencement.scm gnu: Allow building toolchain with non-default libc. 2019-07-16 11:13:15 -04:00
compression.scm gnu: zstd: Update to 1.4.2. 2019-07-27 23:58:49 +02:00
compton.scm
conky.scm
connman.scm
cook.scm
coq.scm
cpio.scm
cpp.scm
cppi.scm
cran.scm gnu: Add r-lda. 2019-08-15 17:44:25 +02:00
crates-io.scm gnu: Add rust-winapi. 2019-08-12 11:57:33 +03:00
cross-base.scm gnu: mingw: Add x86_64 support. 2019-08-14 21:29:53 +02:00
crypto.scm gnu: signify: Update to 26. 2019-07-27 23:58:49 +02:00
cryptsetup.scm
cups.scm gnu: cups-filters: Update to 1.25.1. 2019-08-04 13:49:56 +02:00
curl.scm
cyrus-sasl.scm
databases.scm Merge branch 'staging' 2019-08-13 18:51:12 +02:00
datamash.scm
datastructures.scm
dav.scm
dbm.scm
dc.scm
debian.scm
debug.scm gnu: c-reduce: Update to 2.10.0. 2019-07-17 16:03:56 +02:00
dejagnu.scm
dico.scm
dictionaries.scm gnu: grammalecte: Update to 1.2.1. 2019-07-30 22:28:03 +02:00
digest.scm
direct-connect.scm
disk.scm gnu: dosfstools: Enable compat symlinks. 2019-07-08 13:05:56 +02:00
display-managers.scm
django.scm
djvu.scm
dlang.scm
dns.scm gnu: unbound: Update to 1.9.2. 2019-07-28 11:06:59 +02:00
docbook.scm gnu: Replace uses of texlive-*-amsfonts. 2019-07-24 09:46:49 +02:00
docker.scm gnu: docker-compose: Remove inputs for old Python versions. 2019-08-05 01:06:58 +02:00
documentation.scm
dunst.scm
dvtm.scm
easyrpg.scm
ebook.scm gnu: Add xchm. 2019-07-25 09:23:17 +02:00
ed.scm
education.scm gnu: snap: Update to 5.0.8. 2019-08-01 22:42:26 +02:00
efi.scm
electronics.scm
elf.scm
elixir.scm
emacs-xyz.scm gnu: emacs-relint: Update to 1.10. 2019-08-13 12:52:47 +02:00
emacs.scm
embedded.scm
emulators.scm gnu: mame: Fix build. 2019-08-12 15:39:59 +02:00
enchant.scm gnu: enchant: Update to 2.2.5. 2019-08-04 16:21:26 +02:00
engineering.scm gnu: Add cutter. 2019-08-08 20:14:14 +02:00
enlightenment.scm gnu: terminology: Update to 1.5.0. 2019-07-23 16:35:51 +03:00
entr.scm
erlang.scm
fabric-management.scm
fcitx.scm
figlet.scm
file-systems.scm
file.scm
finance.scm gnu: Update electrum to 3.3.8. 2019-08-11 08:42:10 -07:00
firmware.scm
flashing-tools.scm gnu: rkflashtool: Update to 5.2-1.8966c4e. 2019-07-15 12:10:32 +03:00
flex.scm
fltk.scm
fonts.scm gnu: font-gnu-unifont: Update to 12.1.03. 2019-08-12 11:22:40 +03:00
fontutils.scm Revert "gnu: fontforge: Update to 20190801." 2019-08-02 08:42:14 +02:00
forth.scm
fpga.scm
freedesktop.scm Revert "gnu: libinput: Update to 1.14.0." 2019-08-15 16:28:21 +02:00
freeipmi.scm
fribidi.scm
ftp.scm
fvwm.scm
game-development.scm gnu: plib: Fix CVE-2011-4620, CVE-2012-4552. 2019-07-10 12:45:34 +03:00
games.scm gnu: ToME4: Disable parallel build. 2019-08-08 16:45:14 +02:00
gawk.scm
gcal.scm
gcc.scm
gd.scm
gdb.scm
genealogy.scm gnu: Add gramps 2019-06-26 15:59:58 +02:00
genimage.scm
geo.scm gnu: gnome-maps: Fix runtime error. 2019-08-07 19:03:19 +02:00
gettext.scm
ghostscript.scm
gimp.scm
gkrellm.scm
gl.scm gnu: mesa: Update to 19.1.4. 2019-08-07 22:07:41 +02:00
glib.scm
gnome.scm gnu: Add network-manager-openconnect. 2019-08-08 10:08:00 +03:00
gnu-doc.scm
gnu-pw-mgr.scm
gnucash.scm
gnunet.scm gnu: libmicrohttpd: Update to 0.9.65. 2019-07-09 04:48:02 +02:00
gnupg.scm gnu: npth: Update to 1.6. 2019-07-17 16:03:55 +02:00
gnustep.scm
gnuzilla.scm gnu: icecat: Update to 60.8.0-guix1 [security fixes]. 2019-07-09 19:31:36 -04:00
gobby.scm
golang.scm gnu: go-github-com-maruel-panicparse: Update to 1.3.0. 2019-08-12 16:23:11 -04:00
gperf.scm
gpodder.scm
gprolog.scm
gps.scm gnu: gama: Update to 2.06. 2019-07-08 10:38:23 +03:00
graph.scm
graphics.scm gnu: Blender: Use opensubdiv. 2019-08-13 14:43:42 -04:00
graphviz.scm
groff.scm
groovy.scm
gsasl.scm
gstreamer.scm gnu: gstreamer: Fix buffer offset problem. 2019-06-29 23:17:13 +02:00
gtk.scm gnu: gtk+: Update to 3.24.10. 2019-08-04 13:49:56 +02:00
guile-wm.scm
guile-xyz.scm gnu: guile-email: Update to 0.2.0. 2019-08-09 14:45:33 +05:30
guile.scm gnu: guile-next: Update to 2.9.3. 2019-08-03 08:14:20 -04:00
gv.scm
gxmessage.scm
ham-radio.scm gnu: Add aptdec. 2019-07-12 22:44:55 +05:30
hardware.scm
haskell-apps.scm gnu: git-annex: Update to 7.20190708. 2019-08-08 20:14:14 +02:00
haskell-check.scm gnu: ghc-ansi-terminal: Downgrade to 0.8.0.4. 2019-08-07 22:05:30 -04:00
haskell-crypto.scm gnu: Add ghc-openssl-streams. 2019-08-07 22:05:32 -04:00
haskell-web.scm gnu: Add ghc-snap-server. 2019-08-07 22:05:33 -04:00
haskell-xyz.scm gnu: Add ghc-io-streams-haproxy. 2019-08-07 22:05:32 -04:00
haskell.scm gnu: ghc-trifecta: Disable tests. 2019-08-07 22:05:34 -04:00
hexedit.scm
hugs.scm
hurd.scm
hyperledger.scm
i2p.scm gnu: i2pd: Rewrite 'check phase using with-directory-excursion. 2019-07-18 18:52:49 +03:00
ibus.scm
icu4c.scm gnu: ungoogled-chromium: Build against ICU 64. 2019-06-30 14:11:00 +02:00
idris.scm gnu: Remove ghc-parsec, ghc-stm, ghc-text, ghc-xhtml. 2019-08-07 22:05:29 -04:00
idutils.scm
image-processing.scm gnu: Add itk-snap. 2019-08-15 14:09:14 +02:00
image-viewers.scm gnu: feh: Update to 3.2.1. 2019-07-27 23:58:49 +02:00
image.scm Merge branch 'master' into staging 2019-08-08 00:35:37 +02:00
imagemagick.scm gnu: ImageMagick: Update to 6.9.10-58. 2019-08-04 13:49:55 +02:00
inklingreader.scm
inkscape.scm
ipfs.scm
irc.scm gnu: irssi: Update to 1.1.3. [fixes CVE-2019-13045]. 2019-07-03 14:37:33 -04:00
iso-codes.scm
java-compression.scm
java-maths.scm
java.scm gnu: Add openjdk12. 2019-06-21 22:50:25 +02:00
javascript.scm gnu: mujs: Update to 1.0.6 [fixes CVE-2019-1141{1,2,3}, CVE-2019-12798]. 2019-07-10 12:45:35 +03:00
jemalloc.scm
jose.scm
jrnl.scm
julia.scm gnu: julia: Update to 1.1.1. 2019-07-24 00:31:23 +02:00
kawa.scm
kde-frameworks.scm
kde-plasma.scm
kde.scm gnu: krita: Update to 4.2.5. 2019-08-03 01:13:47 +02:00
kerberos.scm
key-mon.scm
kodi.scm gnu: kodi: Update to 18.3. 2019-07-27 23:58:49 +02:00
language.scm
ld-wrapper.in
lego.scm
less.scm
lesstif.scm
libbsd.scm
libcanberra.scm
libdaemon.scm
libedit.scm
libevent.scm gnu: libevent: Update to 2.1.11. 2019-08-04 16:22:01 +02:00
libffcall.scm
libffi.scm
libftdi.scm
libidn.scm
libphidget.scm
libreoffice.scm gnu: libreoffice: Fix xdg-open absolute paths. 2019-07-21 16:47:55 -07:00
libsigsegv.scm
libunistring.scm
libunwind.scm
libusb.scm
license.scm
lighting.scm
linux.scm gnu: linux-libre@4.9: Update to 4.9.189. 2019-08-11 13:14:59 -04:00
lirc.scm
lisp.scm gnu: sbcl-trivia: Fix .asd loading. 2019-08-02 17:45:37 +02:00
llvm.scm gnu: llvm: Add 'system->llvm-target' procedure. 2019-07-24 00:31:22 +02:00
logging.scm gnu: glog: Disable test that fails on non-x86_64 platforms. 2019-07-19 16:33:54 +02:00
logo.scm gnu: Add qlogo. 2019-07-05 12:49:25 +05:30
lolcode.scm
lout.scm
lsof.scm
lua.scm
lxde.scm
lxqt.scm
m4.scm
machine-learning.scm gnu: ghmm: Remove extra build phase. 2019-08-07 20:05:59 +03:00
magic-wormhole.scm
mail.scm gnu: dovecot-libsodium-plugin: Remove extra build phase. 2019-08-07 20:05:59 +03:00
make-bootstrap.scm
man.scm gnu: man-pages: Update to 5.02. 2019-08-03 17:41:29 +02:00
markup.scm
marst.scm
mastodon.scm gnu: toot: Don't install the Makefile. 2019-06-25 19:09:51 +03:00
mate.scm gnu: mate-themes: Update to 3.22.20. 2019-06-23 00:22:29 +02:00
maths.scm Merge branch 'master' into staging 2019-08-08 00:35:37 +02:00
maven.scm
mc.scm gnu: mc: Update to 4.8.23. 2019-06-25 17:22:11 +02:00
mcrypt.scm
medical.scm
mes.scm
messaging.scm gnu: telegram-purple: Update to 1.4.1. 2019-07-17 15:36:04 +02:00
microcom.scm
mingw.scm gnu: mingw: Add x86_64 support. 2019-08-14 21:29:53 +02:00
moe.scm
monitoring.scm
mono.scm
moreutils.scm
motti.scm
mp3.scm gnu: libmad: Add more security fixes from Debian. 2019-08-06 03:18:24 -04:00
mpd.scm gnu: MPD: Update to 0.21.13. 2019-08-12 16:21:52 -04:00
mpi.scm
mtools.scm
multiprecision.scm gnu: mpfi: Use @acronym{} in Texinfo. 2019-08-03 23:26:40 +02:00
music.scm gnu: cmus: Support AAC format. 2019-07-12 23:54:19 +02:00
musl.scm
nano.scm
ncdu.scm
ncurses.scm
netpbm.scm
nettle.scm
networking.scm gnu: wireshark: Update to 3.0.3. 2019-08-01 17:30:11 +02:00
nfs.scm
nickle.scm
nim.scm
ninja.scm
node.scm
noweb.scm
nss.scm gnu: nss: Fix build failure on armhf-linux. 2019-08-06 17:06:57 +02:00
ntp.scm
nutrition.scm
nvi.scm
ocaml.scm
ocr.scm
onc-rpc.scm
openbox.scm
opencl.scm
openldap.scm
openstack.scm
orpheus.scm
ots.scm
package-management.scm gnu: diffoscope: Update to 120. 2019-08-11 07:45:25 -07:00
parallel.scm
password-utils.scm gnu: Add qtpass. 2019-07-04 12:31:44 +02:00
patchutils.scm gnu: patchwork: Update to 2.1.4. 2019-07-05 07:52:44 +01:00
pciutils.scm
pcre.scm gnu: Remove pcre2/fixed. 2019-08-04 13:49:45 +02:00
pdf.scm gnu: zathura-pdf-mupdf: Update to 0.3.5. 2019-08-13 18:40:54 +02:00
pem.scm
perl-check.scm gnu: perl-test-simple: Update to 1.302164. 2019-07-22 10:07:57 +03:00
perl-compression.scm
perl-web.scm
perl.scm Merge branch 'master' into staging 2019-08-08 00:35:37 +02:00
perl6.scm
phabricator.scm
photo.scm gnu: LibRaw: Update to 0.19.4. 2019-08-08 17:48:45 +02:00
php.scm gnu: Remove pcre2/fixed. 2019-08-04 13:49:45 +02:00
pkg-config.scm
plotutils.scm gnu: Replace uses of texlive-*-amsfonts. 2019-07-24 09:46:49 +02:00
poedit.scm
polkit.scm
popt.scm
pretty-print.scm gnu: a2ps: Fix CVE-2015-8107. 2019-07-10 12:47:47 +03:00
printers.scm
profiling.scm
protobuf.scm
pth.scm
pulseaudio.scm gnu: Add pulseaudio-dlna. 2019-07-04 18:05:03 +02:00
pumpio.scm
pure.scm
pv.scm
python-check.scm gnu: Add python-pytest-virtualenv. 2019-06-26 16:24:58 +02:00
python-compression.scm gnu: Add python-zipp. 2019-06-26 16:24:58 +02:00
python-crypto.scm gnu: python-bcrypt: Update to 3.1.7. 2019-06-22 01:37:35 +02:00
python-web.scm gnu: Add python-flask-htpasswd. 2019-07-17 11:50:18 +02:00
python-xyz.scm Revert "gnu: python-packaging: Update to 19.1." 2019-08-11 14:58:14 +02:00
python.scm
qt.scm gnu: qtwebkit: Update to 5.212.0-alpha3. 2019-07-21 08:46:12 +03:00
ragel.scm
rails.scm
ratpoison.scm
rdesktop.scm
rdf.scm gnu: sord: Propagate serd. 2019-07-17 16:03:56 +02:00
re2c.scm
readline.scm
regex.scm gnu: re2: Update to 2019-08-01. 2019-08-04 13:33:42 +02:00
robotics.scm
rrdtool.scm
rsync.scm
ruby.scm gnu: ruby-pg: Update to 1.1.4. 2019-08-08 17:48:46 +02:00
rush.scm gnu: rush: Update to 2.1. 2019-07-13 15:13:52 +02:00
rust.scm gnu: rust: Fix hash. 2019-07-12 14:55:11 +02:00
sagemath.scm gnu: Move ratpoints into "sagemath.scm" 2019-06-21 22:57:19 +02:00
samba.scm gnu: samba: Update to 4.10.6. 2019-08-04 16:22:35 +02:00
sawfish.scm gnu: rep-gtk: Update to 0.90.8.3. 2019-06-27 12:22:04 +05:30
scanner.scm gnu: sane-backends: Build back ends that need JPEG support. 2019-08-01 05:43:33 +02:00
scheme.scm
screen.scm
scribus.scm gnu: scribus: Update to 1.5.5. 2019-08-13 12:44:06 +02:00
scsi.scm
sdcc.scm
sdl.scm gnu: sdl2: Update to 2.0.10. 2019-07-26 19:08:46 +02:00
search.scm gnu: xapian: Update to 1.4.12. 2019-08-13 18:40:55 +02:00
security-token.scm gnu: ccid: Update to 1.4.31. 2019-08-13 18:40:55 +02:00
selinux.scm
serialization.scm gnu: jsoncpp: Update to 1.9.1. 2019-07-22 16:22:22 +02:00
serveez.scm
shells.scm gnu: mksh: Update to 57. 2019-08-01 07:04:27 +02:00
shellutils.scm
simh.scm
simulation.scm
skarnet.scm
skribilo.scm
slang.scm
smalltalk.scm
sml.scm
speech.scm
sphinx.scm
spice.scm gnu: spice-gtk: Update to 0.37. 2019-07-24 21:29:10 +02:00
sqlite.scm
squirrel.scm
ssh.scm Revert "gnu: openssh: Don't create the PRIVSEP_PATH directory." 2019-06-27 00:21:16 +02:00
sssd.scm
stalonetray.scm
statistics.scm gnu: r-ggplot2: Update to 3.2.1. 2019-08-12 10:25:29 +02:00
stb.scm
storage.scm
suckless.scm
swig.scm
sync.scm gnu: zstd: Move libraries to separate outputs. 2019-07-22 16:22:22 +02:00
syncthing.scm gnu: Syncthing: Update to 1.2.1. 2019-08-12 16:23:12 -04:00
syndication.scm
synergy.scm
task-management.scm
tbb.scm
tcl.scm gnu: Add go-github.com-nsf-gothic. 2019-06-22 17:11:27 +02:00
telephony.scm gnu: jami-client-gnome: Rename to 'jami'. 2019-07-26 11:21:36 +02:00
terminals.scm gnu: kitty: Update to 0.14.3. 2019-08-06 13:06:25 +02:00
terraform.scm
tex.scm gnu: texlive-amsfonts: Build .ins file instead of installing fonts twice. 2019-07-24 18:25:12 +02:00
texinfo.scm
text-editors.scm gnu: texmacs: Update to 1.99.11. 2019-08-03 01:13:47 +02:00
textutils.scm gnu: go-github.com-mattn-go-runewidth: Update to 0.0.4-1.703b5e6. 2019-07-29 16:09:39 +02:00
time.scm Merge branch 'master' into staging 2019-07-10 00:55:42 +02:00
tls.scm gnu: Add go-github-com-certifi-gocertifi. 2019-07-29 14:57:03 -04:00
tmux.scm
tor.scm gnu: onionshare: Upgrade to 2.1. 2019-08-13 22:34:57 -05:00
toys.scm
tryton.scm
tv.scm
uml.scm
unrtf.scm
upnp.scm gnu: Add readymedia. 2019-07-17 15:36:04 +02:00
usb-modeswitch.scm
uucp.scm
valgrind.scm
version-control.scm Merge branch 'staging' 2019-08-13 18:51:12 +02:00
video.scm Merge branch 'staging' 2019-08-13 18:51:12 +02:00
vim.scm gnu: vifm: Re-indent package. 2019-08-12 11:56:55 +03:00
virtualization.scm gnu: libvirt: Update to 5.6.0. 2019-08-05 21:03:31 +02:00
vpn.scm gnu: openconnect: Update to 8.04. 2019-08-11 19:43:02 +02:00
vulkan.scm gnu: vulkan-headers: Update to 1.1.114. 2019-07-25 11:13:20 +02:00
w3m.scm
wdiff.scm
web-browsers.scm
web.scm gnu: perl-cgi: Update to 4.44. 2019-08-04 13:49:56 +02:00
webkit.scm gnu: WebKitGTK: Update to 2.24.3. 2019-07-02 17:27:13 +02:00
wget.scm gnu: wgetpaste: Update to 2.29. 2019-07-09 16:52:59 +03:00
wicd.scm
wine.scm gnu: wine: Adapt Intel Vulkan on i686-linux. 2019-08-05 16:47:36 +02:00
wireservice.scm gnu: wireservice: New wireservice-package macro. 2019-07-08 13:05:55 +02:00
wm.scm gnu: Remove ghc-parsec, ghc-stm, ghc-text, ghc-xhtml. 2019-08-07 22:05:29 -04:00
wordnet.scm
wv.scm
wxwidgets.scm
xdisorg.scm Merge branch 'staging' 2019-07-11 20:33:44 +02:00
xfce.scm gnu: thunar-volman: Update to 0.9.3. 2019-07-03 00:26:08 +02:00
xfig.scm
xiph.scm gnu: flac: Update to 1.3.3. 2019-08-04 13:57:53 +02:00
xml.scm gnu: expat: fix CVE-2018-20843 2019-07-12 00:39:01 +02:00
xnee.scm
xorg.scm Merge branch 'master' into staging 2019-08-08 00:35:37 +02:00
zile.scm
zwave.scm gnu: open-zwave: Use the bundled TinyXML. 2019-07-15 18:27:23 +02:00