480 lines
18 KiB
Scheme
480 lines
18 KiB
Scheme
;;; GNU Guix --- Functional package management for GNU
|
||
;;; Copyright © 2015, 2017, 2019 Ricardo Wurmus <rekado@elephly.net>
|
||
;;; Copyright © 2016 Lukas Gradl <lgradl@openmailbox.org>
|
||
;;; Copyright © 2016 David Craven <david@craven.ch>
|
||
;;; Copyright © 2016, 2019 Marius Bakke <mbakke@fastmail.com>
|
||
;;; Copyright © 2016, 2018, 2019 Efraim Flashner <efraim@flashner.co.il>
|
||
;;; Copyright © 2017 Corentin Bocquillon <corentin@nybble.fr>
|
||
;;; Copyright © 2017 Gregor Giesen <giesen@zaehlwerk.net>
|
||
;;; Copyright © 2017 Frederick M. Muriithi <fredmanglis@gmail.com>
|
||
;;; Copyright © 2017 ng0 <ng0@n0.is>
|
||
;;; Copyright © 2017, 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
|
||
;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com>
|
||
;;;
|
||
;;; This file is part of GNU Guix.
|
||
;;;
|
||
;;; GNU Guix is free software; you can redistribute it and/or modify it
|
||
;;; under the terms of the GNU General Public License as published by
|
||
;;; the Free Software Foundation; either version 3 of the License, or (at
|
||
;;; your option) any later version.
|
||
;;;
|
||
;;; GNU Guix is distributed in the hope that it will be useful, but
|
||
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
|
||
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||
;;; GNU General Public License for more details.
|
||
;;;
|
||
;;; You should have received a copy of the GNU General Public License
|
||
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
|
||
|
||
(define-module (gnu packages serialization)
|
||
#:use-module ((guix licenses) #:prefix license:)
|
||
#:use-module (guix packages)
|
||
#:use-module (guix download)
|
||
#:use-module (guix git-download)
|
||
#:use-module (guix utils)
|
||
#:use-module (guix build-system cmake)
|
||
#:use-module (guix build-system gnu)
|
||
#:use-module (guix build-system python)
|
||
#:use-module (gnu packages)
|
||
#:use-module (gnu packages autotools)
|
||
#:use-module (gnu packages boost)
|
||
#:use-module (gnu packages check)
|
||
#:use-module (gnu packages compression)
|
||
#:use-module (gnu packages cpp)
|
||
#:use-module (gnu packages databases)
|
||
#:use-module (gnu packages documentation)
|
||
#:use-module (gnu packages gcc)
|
||
#:use-module (gnu packages lua)
|
||
#:use-module (gnu packages pkg-config)
|
||
#:use-module (gnu packages python)
|
||
#:use-module (gnu packages python-science)
|
||
#:use-module (gnu packages python-xyz)
|
||
#:use-module (gnu packages perl))
|
||
|
||
(define-public cereal
|
||
(package
|
||
(name "cereal")
|
||
(version "1.2.1")
|
||
(source
|
||
(origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/USCiLab/cereal.git")
|
||
(commit (string-append "v" version))))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32 "1vxkrsnxkiblzi1z61vfix167c184fy868sgwj2dxxgbgjcq2nrh"))))
|
||
(build-system cmake-build-system)
|
||
(arguments
|
||
`(;; The only included tests are portability tests requiring
|
||
;; cross-compilation and boost. Since we are building cereal on more
|
||
;; platforms anyway, there is no compelling reason to build the tests.
|
||
#:tests? #f
|
||
#:out-of-source? #f
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(delete 'configure)
|
||
(replace 'build
|
||
(lambda _
|
||
(substitute* "doc/doxygen.in"
|
||
(("@CMAKE_CURRENT_SOURCE_DIR@") "."))
|
||
(invoke "doxygen" "doc/doxygen.in")
|
||
#t))
|
||
;; There is no "install" target, so we have to provide our own
|
||
;; "install" phase.
|
||
(replace 'install
|
||
(lambda* (#:key outputs #:allow-other-keys)
|
||
(let* ((out (assoc-ref outputs "out"))
|
||
(doc (string-append out "/share/cereal/docs"))
|
||
(include (string-append out "/include/cereal")))
|
||
(mkdir-p doc)
|
||
(mkdir-p include)
|
||
(copy-recursively "include/cereal" include)
|
||
(copy-recursively "doc/html" doc))
|
||
#t)))))
|
||
(native-inputs
|
||
`(("doxygen" ,doxygen)))
|
||
(home-page "http://uscilab.github.io/cereal/")
|
||
(synopsis "C++11 library for serialization")
|
||
(description
|
||
"Cereal is a header-only C++11 serialization library. Cereal takes
|
||
arbitrary data types and reversibly turns them into different representations,
|
||
such as compact binary encodings, XML, or JSON.")
|
||
(license license:bsd-3)))
|
||
|
||
(define-public msgpack
|
||
(package
|
||
(name "msgpack")
|
||
(version "3.2.1")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri
|
||
(string-append
|
||
"https://github.com/msgpack/msgpack-c/releases/download/"
|
||
"cpp-" version "/msgpack-" version ".tar.gz"))
|
||
(snippet
|
||
'(let ((p (open-file "msgpack.pc.in" "a")))
|
||
(display
|
||
(string-append "Requires: " "zlib" "\n") p)
|
||
(close-output-port p)
|
||
#t))
|
||
(sha256
|
||
(base32 "1ljqmgscdb0f8w8kx2lnswnisyxchcmijbjbmswkv0g187bvqg23"))))
|
||
(build-system cmake-build-system)
|
||
(native-inputs
|
||
`(("googletest" ,googletest-1.8)
|
||
("pkg-config" ,pkg-config)))
|
||
(propagated-inputs
|
||
`(("zlib" ,zlib))) ;; Msgpack installs two headers (zbuffer.h,
|
||
;; zbuffer.hpp) which #include <zlib.h>. However, 'guix gc --references'
|
||
;; does not detect a store reference to zlib since these headers are not
|
||
;; compiled.
|
||
(home-page "https://www.msgpack.org")
|
||
(synopsis "Binary serialization library")
|
||
(description "Msgpack is a library for C/C++ that implements binary
|
||
serialization.")
|
||
(license license:boost1.0)))
|
||
|
||
(define-public libmpack
|
||
(package
|
||
(name "libmpack")
|
||
(version "1.0.5")
|
||
(source
|
||
(origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/tarruda/libmpack.git")
|
||
(commit version)))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32 "0rai5djdkjz7bsn025k5489in7r1amagw1pib0z4qns6b52kiar2"))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
`(#:test-target "test"
|
||
#:make-flags
|
||
(list "CC=gcc"
|
||
(string-append "PREFIX=" (assoc-ref %outputs "out")))
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(delete 'configure))))
|
||
(native-inputs
|
||
`(("libtool" ,libtool)))
|
||
(home-page "https://github.com/tarruda/libmpack")
|
||
(synopsis "Small binary serialization library")
|
||
(description "Libmpack is a small binary serialization and RPC library
|
||
that implements both the msgpack and msgpack-rpc specifications.")
|
||
(license license:expat)))
|
||
|
||
(define-public lua-libmpack
|
||
(package (inherit libmpack)
|
||
(name "lua-libmpack")
|
||
(version "1.0.8")
|
||
(source
|
||
(origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/libmpack/libmpack-lua.git")
|
||
(commit version)))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32 "1ijvzgq5hvib03w5rghv31wi7byamwg7qdx5pawvhvnflaii8ivw"))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
`(;; FIXME: tests require "busted", which is not yet available in Guix.
|
||
#:tests? #f
|
||
#:test-target "test"
|
||
#:make-flags
|
||
(let* ((lua-version ,(package-version lua))
|
||
(lua-major+minor ,(version-major+minor (package-version lua))))
|
||
(list "CC=gcc"
|
||
"FETCH=echo" ; don't fetch anything from the web
|
||
"UNTGZ=echo" ; and don't try to unpack it
|
||
"USE_SYSTEM_LUA=yes"
|
||
(string-append "MPACK_LUA_VERSION=" lua-version)
|
||
(string-append "MPACK_LUA_VERSION_NOPATCH=" lua-major+minor)
|
||
(string-append "PREFIX="
|
||
(assoc-ref %outputs "out"))
|
||
(string-append "LUA_CMOD_INSTALLDIR="
|
||
(assoc-ref %outputs "out")
|
||
"/lib/lua/" lua-major+minor)))
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(delete 'configure)
|
||
(add-after 'unpack 'unpack-mpack-sources
|
||
(lambda* (#:key inputs #:allow-other-keys)
|
||
;; This is broken because mpack-src is not a file, but all
|
||
;; prerequisites are added to the inputs of the gcc invocation.
|
||
(substitute* "Makefile"
|
||
(("\\$\\(MPACK\\): mpack-src") "$(MPACK): "))
|
||
(copy-recursively (assoc-ref inputs "libmpack")
|
||
"mpack-src")
|
||
#t)))))
|
||
(inputs
|
||
`(("lua" ,lua)))
|
||
(native-inputs
|
||
`(("pkg-config" ,pkg-config)
|
||
("libmpack" ,(package-source libmpack))))
|
||
(home-page "https://github.com/libmpack/libmpack-lua")
|
||
(synopsis "Lua bindings for the libmpack binary serialization library")))
|
||
|
||
(define-public lua5.1-libmpack
|
||
(package (inherit lua-libmpack)
|
||
(name "lua5.1-libmpack")
|
||
(arguments
|
||
(substitute-keyword-arguments (package-arguments lua-libmpack)
|
||
((#:make-flags flags)
|
||
`(let* ((lua-version ,(package-version lua-5.1))
|
||
(lua-major+minor ,(version-major+minor (package-version lua-5.1))))
|
||
(list "CC=gcc"
|
||
"USE_SYSTEM_LUA=yes"
|
||
(string-append "MPACK_LUA_VERSION=" lua-version)
|
||
(string-append "MPACK_LUA_VERSION_NOPATCH=" lua-major+minor)
|
||
(string-append "PREFIX="
|
||
(assoc-ref %outputs "out"))
|
||
(string-append "LUA_CMOD_INSTALLDIR="
|
||
(assoc-ref %outputs "out")
|
||
"/lib/lua/" lua-major+minor))))))
|
||
(inputs
|
||
`(("lua" ,lua-5.1)))))
|
||
|
||
(define-public lua5.2-libmpack
|
||
(package (inherit lua-libmpack)
|
||
(name "lua5.2-libmpack")
|
||
(arguments
|
||
(substitute-keyword-arguments (package-arguments lua-libmpack)
|
||
((#:make-flags flags)
|
||
`(let* ((lua-version ,(package-version lua-5.2))
|
||
(lua-major+minor ,(version-major+minor (package-version lua-5.2))))
|
||
(list "CC=gcc"
|
||
"USE_SYSTEM_LUA=yes"
|
||
(string-append "MPACK_LUA_VERSION=" lua-version)
|
||
(string-append "MPACK_LUA_VERSION_NOPATCH=" lua-major+minor)
|
||
(string-append "PREFIX="
|
||
(assoc-ref %outputs "out"))
|
||
(string-append "LUA_CMOD_INSTALLDIR="
|
||
(assoc-ref %outputs "out")
|
||
"/lib/lua/" lua-major+minor))))))
|
||
(inputs
|
||
`(("lua" ,lua-5.2)))))
|
||
|
||
(define-public yaml-cpp
|
||
(package
|
||
(name "yaml-cpp")
|
||
(version "0.6.3")
|
||
(source
|
||
(origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/jbeder/yaml-cpp.git")
|
||
(commit (string-append "yaml-cpp-" version))))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32 "0ykkxzxcwwiv8l8r697gyqh1nl582krpvi7m7l6b40ijnk4pw30s"))))
|
||
(build-system cmake-build-system)
|
||
(arguments
|
||
'(#:configure-flags '("-DYAML_BUILD_SHARED_LIBS=ON")))
|
||
(native-inputs
|
||
`(("python" ,python)))
|
||
(home-page "https://github.com/jbeder/yaml-cpp")
|
||
(synopsis "YAML parser and emitter in C++")
|
||
(description "YAML parser and emitter in C++ matching the YAML 1.2 spec.")
|
||
(license license:bsd-3)))
|
||
|
||
(define-public jsoncpp
|
||
(package
|
||
(name "jsoncpp")
|
||
(version "1.9.2")
|
||
(home-page "https://github.com/open-source-parsers/jsoncpp")
|
||
(source (origin
|
||
(method git-fetch)
|
||
(uri (git-reference (url home-page) (commit version)))
|
||
(file-name (git-file-name name version))
|
||
(patches (search-patches "jsoncpp-fix-inverted-case.patch"))
|
||
(sha256
|
||
(base32
|
||
"037d1b1qdmn3rksmn1j71j26bv4hkjv7sn7da261k853xb5899sg"))))
|
||
(build-system cmake-build-system)
|
||
(arguments
|
||
`(#:configure-flags '("-DBUILD_SHARED_LIBS:BOOL=YES")))
|
||
(synopsis "C++ library for interacting with JSON")
|
||
(description "JsonCpp is a C++ library that allows manipulating JSON values,
|
||
including serialization and deserialization to and from strings. It can also
|
||
preserve existing comment in unserialization/serialization steps, making
|
||
it a convenient format to store user input files.")
|
||
(license license:expat)))
|
||
|
||
;; Tensorflow does not build with jsoncpp 1.8.x. It is built with commit
|
||
;; 4356d9bba191e1e16ce7a92073cbf3e63564e973, which lies between version 1.7.2
|
||
;; and 1.7.3.
|
||
(define-public jsoncpp-for-tensorflow
|
||
(package (inherit jsoncpp)
|
||
(name "jsoncpp")
|
||
(version "1.7.3")
|
||
(source (origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/open-source-parsers/jsoncpp.git")
|
||
(commit version)))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32
|
||
"1180ln8blrb0mwzpcf78k49hlki6di65q77rsvglf83kfcyh4d7z"))))))
|
||
|
||
(define-public capnproto
|
||
(package
|
||
(name "capnproto")
|
||
(version "0.7.0")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append
|
||
"https://capnproto.org/capnproto-c++-"
|
||
version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"0hfdnhlbskagzgvby8wy6lrxj53zfzpfqimbhga68c0ji2yw1969"))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
`(#:phases
|
||
(modify-phases %standard-phases
|
||
(add-before 'check 'do-not-require-/etc/services
|
||
(lambda _
|
||
;; Workaround for test that tries to resolve port name from
|
||
;; /etc/services, which is not present in build environment.
|
||
(substitute* "src/kj/async-io-test.c++" ((":http") ":80"))
|
||
#t))
|
||
(add-before 'check 'use-tmp-for-tempory-files
|
||
(lambda _
|
||
;; Use /tmp for tempory files, as the default /var/tmp directory
|
||
;; doesn't exist.
|
||
(substitute* "src/kj/filesystem-disk-test.c++"
|
||
(("VAR\\_TMP \"/var/tmp\"")
|
||
"VAR_TMP \"/tmp\""))
|
||
#t)))))
|
||
(home-page "https://capnproto.org")
|
||
(synopsis "Capability-based RPC and serialization system")
|
||
(description
|
||
"Cap'n Proto is a very fast data interchange format and capability-based
|
||
RPC system. Think JSON, except binary. Or think Protocol Buffers, except faster.")
|
||
(license license:expat)))
|
||
|
||
(define-public libbson
|
||
(package
|
||
(name "libbson")
|
||
(version "1.6.2")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://github.com/mongodb/libbson/releases/"
|
||
"download/" version "/libbson-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"1fj4554msq0rrz14snbj908dzqj46gh7jg9w9j0akn2b7q911m5a"))))
|
||
(build-system gnu-build-system)
|
||
(native-inputs `(("perl" ,perl)))
|
||
(home-page "http://mongoc.org/libbson/current/index.html")
|
||
(synopsis "C BSON library")
|
||
(description "Libbson can create and parse BSON documents. It can also
|
||
convert JSON documents to BSON and the opposite. BSON stands for Binary JSON,
|
||
it is comparable to protobuf.")
|
||
(license license:asl2.0)))
|
||
|
||
(define-public python-ruamel.yaml
|
||
(package
|
||
(name "python-ruamel.yaml")
|
||
(version "0.15.83")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "ruamel.yaml" version))
|
||
(sha256
|
||
(base32
|
||
"0p4i8ad28cbbbjja8b9274irkhnphhvhap3aym6yb8xfp1d72kpw"))))
|
||
(build-system python-build-system)
|
||
(native-inputs
|
||
`(("python-pytest" ,python-pytest)))
|
||
(arguments
|
||
`(;; TODO: Tests require packaging "ruamel.std.pathlib".
|
||
#:tests? #f))
|
||
(home-page "https://bitbucket.org/ruamel/yaml")
|
||
(synopsis "YAML 1.2 parser/emitter")
|
||
(description
|
||
"This package provides YAML parser/emitter that supports roundtrip
|
||
preservation of comments, seq/map flow style, and map key order. It
|
||
is a derivative of Kirill Simonov’s PyYAML 3.11. It supports YAML 1.2
|
||
and has round-trip loaders and dumpers. It supports comments. Block
|
||
style and key ordering are kept, so you can diff the source.")
|
||
(license license:expat)))
|
||
|
||
(define-public python2-ruamel.yaml
|
||
(package-with-python2 python-ruamel.yaml))
|
||
|
||
(define-public python-cbor
|
||
(package
|
||
(name "python-cbor")
|
||
(version "1.0.0")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "cbor" version))
|
||
(sha256
|
||
(base32
|
||
"1dmv163cnslyqccrybkxn0c9s1jk1mmafmgxv75iamnz5lk5l8hk"))))
|
||
(build-system python-build-system)
|
||
(home-page "https://bitbucket.org/bodhisnarkva/cbor")
|
||
(synopsis "Implementation of the Concise Binary Object Representation")
|
||
(description
|
||
"Python-cbor provides an implementation of the Concise Binary Object
|
||
Representation (@dfn{CBOR}). CBOR is comparable to JSON, has a superset of
|
||
JSON's ability, but serializes to a binary format which is smaller and faster
|
||
to generate and parse. The two primary functions are @code{cbor.loads} and
|
||
@code{cbor.dumps}.")
|
||
(license license:asl2.0)))
|
||
|
||
(define-public flatbuffers
|
||
(package
|
||
(name "flatbuffers")
|
||
(version "1.10.0")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://github.com/google/flatbuffers/archive/v"
|
||
version ".tar.gz"))
|
||
(file-name (string-append name "-" version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"0z4swldxs0s31hnkqdhsbfmc8vx3p7zsvmqaw4l31r2iikdy651p"))))
|
||
(build-system cmake-build-system)
|
||
(arguments
|
||
'(#:build-type "Release"
|
||
#:configure-flags
|
||
(list (string-append "-DCMAKE_INSTALL_LIBDIR="
|
||
(assoc-ref %outputs "out") "/lib"))))
|
||
(home-page "https://google.github.io/flatbuffers/")
|
||
(synopsis "Memory-efficient serialization library")
|
||
(description "FlatBuffers is a cross-platform serialization library for C++,
|
||
C#, C, Go, Java, JavaScript, PHP, and Python. It was originally created for
|
||
game development and other performance-critical applications.")
|
||
(license license:asl2.0)))
|
||
|
||
(define-public python-feather-format
|
||
(package
|
||
(name "python-feather-format")
|
||
(version "0.4.0")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "feather-format" version))
|
||
(sha256
|
||
(base32
|
||
"1adivm5w5ji4qv7hq7942vqlk8l2wgw87bdlsia771z14z3zp857"))))
|
||
(build-system python-build-system)
|
||
(propagated-inputs
|
||
`(("python-pandas" ,python-pandas)
|
||
("python-pyarrow" ,python-pyarrow)))
|
||
(home-page "https://github.com/wesm/feather")
|
||
(synopsis "Python wrapper to the Feather file format")
|
||
(description "This package provides a Python wrapper library to the
|
||
Apache Arrow-based Feather binary columnar serialization data frame format.")
|
||
(license license:asl2.0)))
|