466 lines
16 KiB
Scheme
466 lines
16 KiB
Scheme
;;; GNU Guix --- Functional package management for GNU
|
|
;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
|
|
;;; Copyright © 2017, 2019, 2021 Ricardo Wurmus <rekado@elephly.net>
|
|
;;; Copyright © 2017 Nikita <nikita@n0.is>
|
|
;;; Copyright © 2017 Julien Lepiller <julien@lepiller.eu>
|
|
;;; Copyright © 2018, 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
|
|
;;; Copyright © 2020 Nicolas Goaziou <mail@nicolasgoaziou.fr>
|
|
;;; Copyright © 2020, 2022 Marius Bakke <marius@gnu.org>
|
|
;;; Copyright © 2021 Brendan Tildesley <mail@brendan.scot>
|
|
;;;
|
|
;;; This file is part of GNU Guix.
|
|
;;;
|
|
;;; GNU Guix is free software; you can redistribute it and/or modify it
|
|
;;; under the terms of the GNU General Public License as published by
|
|
;;; the Free Software Foundation; either version 3 of the License, or (at
|
|
;;; your option) any later version.
|
|
;;;
|
|
;;; GNU Guix is distributed in the hope that it will be useful, but
|
|
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
|
|
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
|
;;; GNU General Public License for more details.
|
|
;;;
|
|
;;; You should have received a copy of the GNU General Public License
|
|
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
|
|
|
|
(define-module (gnu packages python-compression)
|
|
#:use-module ((guix licenses) #:prefix license:)
|
|
#:use-module (guix utils)
|
|
#:use-module (guix packages)
|
|
#:use-module (guix download)
|
|
#:use-module (guix gexp)
|
|
#:use-module (guix build-system gnu)
|
|
#:use-module (guix build-system python)
|
|
#:use-module (gnu packages)
|
|
#:use-module (gnu packages libffi)
|
|
#:use-module (gnu packages compression)
|
|
#:use-module (gnu packages check)
|
|
#:use-module (gnu packages maths)
|
|
#:use-module (gnu packages pkg-config)
|
|
#:use-module (gnu packages python)
|
|
#:use-module (gnu packages python-build)
|
|
#:use-module (gnu packages python-check)
|
|
#:use-module (gnu packages python-crypto)
|
|
#:use-module (gnu packages python-xyz)
|
|
#:use-module (gnu packages sphinx))
|
|
|
|
(define-public python-multivolumefile
|
|
(package
|
|
(name "python-multivolumefile")
|
|
(version "0.2.2")
|
|
(source
|
|
(origin
|
|
(method url-fetch)
|
|
(uri (pypi-uri "multivolumefile" version))
|
|
(sha256
|
|
(base32
|
|
"0j46wab4b09s3favjzp3zs1cn2sn8pr7qyngs5wn31hpqqxbbz76"))))
|
|
(build-system python-build-system)
|
|
(native-inputs
|
|
(list python-pep517
|
|
python-setuptools
|
|
python-setuptools-scm
|
|
python-coverage
|
|
python-coveralls
|
|
python-pyannotate
|
|
python-pytest
|
|
python-pytest-cov))
|
|
(home-page "https://github.com/miurahr/multivolume")
|
|
(synopsis "Treat multiple files as one")
|
|
(description "MultiVolumefile is a Python library that provides a
|
|
file-object abstraction, making it possible to use multiple files as if they
|
|
were a single file.")
|
|
(license license:lgpl2.1+)))
|
|
|
|
(define-public python-bcj-cffi
|
|
(package
|
|
(name "python-bcj-cffi")
|
|
(version "0.5.0")
|
|
(source
|
|
(origin
|
|
(method url-fetch)
|
|
(uri (pypi-uri "bcj-cffi" version))
|
|
(sha256
|
|
(base32
|
|
"1jcczrb8zgg6w7v76w1wpz3nw75fghk3xwxkn09ll7kck7sdf68d"))))
|
|
(build-system python-build-system)
|
|
(propagated-inputs
|
|
(list python-cffi python-toml python-setuptools-scm))
|
|
(native-inputs
|
|
(list python-setuptools python-coverage python-pytest
|
|
python-pytest-cov))
|
|
(home-page "https://github.com/miurahr/bcj-cffi")
|
|
(synopsis "Branch / Call /Jump CFFI library in Python")
|
|
(description "This package provides an implementation of the Branch / Call /
|
|
Jump conversion filter by CFFI for Python.")
|
|
(license license:lgpl2.1+)))
|
|
|
|
(define-public python-isal
|
|
(package
|
|
(name "python-isal")
|
|
(version "0.11.1")
|
|
(source
|
|
(origin
|
|
(method url-fetch)
|
|
(uri (pypi-uri "isal" version))
|
|
(sha256
|
|
(base32 "1bxj7r24p974pqfgym485s90ydhzji9q7zyfg3sf8fycm9ya01wd"))
|
|
;; Remove bundles isa-l source code
|
|
(modules '((guix build utils)))
|
|
(snippet
|
|
'(delete-file-recursively "src/isal/isa-l"))))
|
|
(build-system python-build-system)
|
|
(arguments
|
|
`(#:phases
|
|
(modify-phases %standard-phases
|
|
(add-after 'unpack 'use-dynamic-linking
|
|
(lambda _ (setenv "PYTHON_ISAL_LINK_DYNAMIC" "1"))))))
|
|
(inputs (list isa-l))
|
|
(native-inputs (list python-cython))
|
|
(home-page "https://github.com/pycompression/python-isal")
|
|
(synopsis "Python bindings for the ISA-L compression library")
|
|
(description
|
|
"This package aims to provide faster zlib and gzip compatible compression
|
|
and decompression by implementing Python bindings for the ISA-L library.")
|
|
(license license:expat)))
|
|
|
|
(define-public python-ppmd-cffi
|
|
(package
|
|
(name "python-ppmd-cffi")
|
|
(version "0.3.3")
|
|
(source
|
|
(origin
|
|
(method url-fetch)
|
|
(uri (pypi-uri "ppmd-cffi" version))
|
|
(sha256
|
|
(base32
|
|
"01wcd9l6pp6hivdmd275qh9dhcwficjqfl67hxix5n07vvq7jzz0"))))
|
|
(build-system python-build-system)
|
|
(propagated-inputs
|
|
(list python-cffi))
|
|
(native-inputs
|
|
(list python-setuptools
|
|
python-setuptools-scm
|
|
python-pep517
|
|
python-coverage
|
|
python-pytest
|
|
python-pytest-cov))
|
|
(home-page "https://github.com/miurahr/ppmd")
|
|
(synopsis "Prediction by Partial Matching compression library")
|
|
(description "PPMd is a compression algorithm library using the Prediction
|
|
by Partial Matching statistical technique. It is used in RAR and 7-Zip as one of
|
|
several possible methods.")
|
|
(license license:lgpl2.1+)))
|
|
|
|
(define-public python-py7zr
|
|
(package
|
|
(name "python-py7zr")
|
|
(version "0.14.1")
|
|
(source
|
|
(origin
|
|
(method url-fetch)
|
|
(uri (pypi-uri "py7zr" version))
|
|
(sha256
|
|
(base32
|
|
"1zmgp7yax328fj8yj8pj4l7yh78hp727j6wk12vfi6nmi82wl32i"))))
|
|
(build-system python-build-system)
|
|
(propagated-inputs
|
|
(list python-bcj-cffi
|
|
python-multivolumefile
|
|
python-ppmd-cffi
|
|
python-pycryptodome
|
|
python-pyzstd
|
|
python-texttable
|
|
python-zstandard))
|
|
(native-inputs
|
|
(list python-setuptools
|
|
python-setuptools-scm
|
|
python-coverage
|
|
python-coveralls
|
|
python-libarchive-c
|
|
python-py-cpuinfo
|
|
python-pyannotate
|
|
python-pytest
|
|
python-pytest-benchmark
|
|
python-pytest-cov
|
|
python-pytest-remotedata
|
|
python-pytest-timeout))
|
|
(home-page "https://github.com/miurahr/py7zr")
|
|
(synopsis "7-zip in Python")
|
|
(description "This package provides py7zr, which implements 7-zip
|
|
archive compression, decompression, encryption and decryption in
|
|
Python.")
|
|
(license license:lgpl2.1+)))
|
|
|
|
(define-public python-lzo
|
|
(package
|
|
(name "python-lzo")
|
|
(version "1.14")
|
|
(source
|
|
(origin
|
|
(method url-fetch)
|
|
(uri (pypi-uri "python-lzo" version))
|
|
(sha256
|
|
(base32 "0315nq6r39n51n8qqamb7xv0ib0qrh76q7g3a1977172mbndijw3"))))
|
|
(build-system python-build-system)
|
|
(arguments
|
|
(list
|
|
#:test-target "check"
|
|
#:phases
|
|
#~(modify-phases %standard-phases
|
|
(add-after 'unpack 'patch-setuppy
|
|
(lambda _
|
|
(substitute* "setup.py"
|
|
(("include_dirs.append\\(.*\\)")
|
|
(string-append "include_dirs.append('"
|
|
#$(this-package-input "lzo")
|
|
"/include/lzo"
|
|
"')"))))))))
|
|
(inputs
|
|
(list lzo))
|
|
(home-page "https://github.com/jd-boyd/python-lzo")
|
|
(synopsis "Python bindings for the LZO data compression library")
|
|
(description
|
|
"Python-LZO provides Python bindings for LZO, i.e. you can access
|
|
the LZO library from your Python scripts thereby compressing ordinary
|
|
Python strings.")
|
|
(license license:gpl2+)))
|
|
|
|
(define-public python-lz4
|
|
(package
|
|
(name "python-lz4")
|
|
(version "4.0.2")
|
|
(source
|
|
(origin
|
|
(method url-fetch)
|
|
(uri (pypi-uri "lz4" version))
|
|
(sha256
|
|
(base32
|
|
"16vj2bnhhdkcz2a2ai2mx2kf9ngx1cjr18636yp1514kq9r72fq8"))
|
|
(modules '((guix build utils)))
|
|
(snippet
|
|
'(begin
|
|
;; Remove bundled copy of lz4.
|
|
(delete-file-recursively "lz4libs")
|
|
#t))))
|
|
(build-system python-build-system)
|
|
(arguments
|
|
(list #:phases
|
|
#~(modify-phases %standard-phases
|
|
(replace 'check
|
|
(lambda* (#:key tests? #:allow-other-keys)
|
|
(when tests?
|
|
;; Taken from tox.ini (excludes experimental tests).
|
|
(invoke "pytest" "-vv" "tests/block" "tests/frame")))))))
|
|
(native-inputs
|
|
(list pkg-config python-pytest python-pkgconfig python-setuptools-scm
|
|
;; For tests.
|
|
python-psutil))
|
|
(inputs
|
|
(list lz4))
|
|
(home-page "https://github.com/python-lz4/python-lz4")
|
|
(synopsis "LZ4 bindings for Python")
|
|
(description
|
|
"This package provides python bindings for the lz4 compression library
|
|
by Yann Collet. The project contains bindings for the LZ4 block format and
|
|
the LZ4 frame format.")
|
|
(license license:bsd-3)))
|
|
|
|
(define-public python-lzstring
|
|
(package
|
|
(name "python-lzstring")
|
|
(version "1.0.4")
|
|
(source
|
|
(origin
|
|
(method url-fetch)
|
|
(uri (pypi-uri "lzstring" version))
|
|
(sha256
|
|
(base32
|
|
"18ly9pppy2yspxzw7k1b23wk77k7m44rz2g0271bqgqrk3jn3yhs"))))
|
|
(build-system python-build-system)
|
|
(propagated-inputs
|
|
(list python-future))
|
|
(home-page "https://github.com/gkovacs/lz-string-python")
|
|
(synopsis "String compression")
|
|
(description "Lz-string is a string compressor library for Python.")
|
|
(license license:expat)))
|
|
|
|
(define-public bitshuffle
|
|
(package
|
|
(name "bitshuffle")
|
|
(version "0.3.5")
|
|
(source (origin
|
|
(method url-fetch)
|
|
(uri (pypi-uri "bitshuffle" version))
|
|
(sha256
|
|
(base32
|
|
"1823x61kyax4dc2hjmc1xraskxi1193y8lvxd03vqv029jrj8cjy"))
|
|
(modules '((guix build utils)))
|
|
(snippet
|
|
'(begin
|
|
;; Remove generated Cython files.
|
|
(delete-file "bitshuffle/h5.c")
|
|
(delete-file "bitshuffle/ext.c")
|
|
#t))))
|
|
(build-system python-build-system)
|
|
(arguments
|
|
`(#:tests? #f ; fail: https://github.com/h5py/h5py/issues/769
|
|
#:phases
|
|
(modify-phases %standard-phases
|
|
(add-after 'unpack 'fix-neon-detection
|
|
;; Neon is only for aarch64 ATM
|
|
;; see: https://github.com/kiyo-masui/bitshuffle/pull/73
|
|
(lambda _
|
|
(substitute* "src/bitshuffle_core.c"
|
|
(("#define USEARMNEON")
|
|
"#ifdef __aarch64__\n#define USEARMNEON\n#endif"))
|
|
#t))
|
|
(add-after 'unpack 'dont-build-native
|
|
(lambda _
|
|
(substitute* "setup.py"
|
|
(("'-march=native', ") ""))
|
|
#t)))))
|
|
(inputs
|
|
`(("numpy" ,python-numpy)
|
|
("h5py" ,python-h5py)
|
|
("hdf5" ,hdf5)))
|
|
(native-inputs
|
|
`(("cython" ,python-cython)))
|
|
(home-page "https://github.com/kiyo-masui/bitshuffle")
|
|
(synopsis "Filter for improving compression of typed binary data")
|
|
(description "Bitshuffle is an algorithm that rearranges typed, binary data
|
|
for improving compression, as well as a python/C package that implements this
|
|
algorithm within the Numpy framework.")
|
|
(license license:expat)))
|
|
|
|
(define-public bitshuffle-for-snappy
|
|
(package/inherit bitshuffle
|
|
(name "bitshuffle-for-snappy")
|
|
(build-system gnu-build-system)
|
|
(arguments
|
|
(substitute-keyword-arguments (package-arguments bitshuffle)
|
|
((#:tests? _ #f) #f)
|
|
((#:phases phases)
|
|
`(modify-phases %standard-phases
|
|
(replace 'configure
|
|
(lambda* (#:key outputs #:allow-other-keys)
|
|
(with-output-to-file "Makefile"
|
|
(lambda _
|
|
(format #t "\
|
|
libbitshuffle.so: src/bitshuffle.o src/bitshuffle_core.o src/iochain.o lz4/lz4.o
|
|
\tgcc -O3 -ffast-math -std=c99 -o $@ -shared -fPIC $^
|
|
|
|
%.o: %.c
|
|
\tgcc -O3 -ffast-math -std=c99 -fPIC -Isrc -Ilz4 -c $< -o $@
|
|
|
|
PREFIX:=~a
|
|
LIBDIR:=$(PREFIX)/lib
|
|
INCLUDEDIR:=$(PREFIX)/include
|
|
|
|
install: libbitshuffle.so
|
|
\tinstall -dm755 $(LIBDIR)
|
|
\tinstall -dm755 $(INCLUDEDIR)
|
|
\tinstall -m755 libbitshuffle.so $(LIBDIR)
|
|
\tinstall -m644 src/bitshuffle.h $(INCLUDEDIR)
|
|
\tinstall -m644 src/bitshuffle_core.h $(INCLUDEDIR)
|
|
\tinstall -m644 src/iochain.h $(INCLUDEDIR)
|
|
\tinstall -m644 lz4/lz4.h $(INCLUDEDIR)
|
|
" (assoc-ref outputs "out"))))
|
|
#t))))))
|
|
(inputs '())
|
|
(native-inputs '())))
|
|
|
|
(define-public python-zipp
|
|
(package
|
|
(name "python-zipp")
|
|
(version "1.0.0")
|
|
(source
|
|
(origin
|
|
(method url-fetch)
|
|
(uri (pypi-uri "zipp" version))
|
|
(sha256
|
|
(base32
|
|
"0v3qayhqv7vyzydpydwcp51bqciw8p2ajddw68x5k8zppc0vx3yk"))))
|
|
(build-system python-build-system)
|
|
(propagated-inputs
|
|
(list python-more-itertools))
|
|
(native-inputs
|
|
(list python-setuptools-scm))
|
|
(home-page "https://github.com/jaraco/zipp")
|
|
(synopsis
|
|
"Backport of pathlib-compatible object wrapper for zip files")
|
|
(description
|
|
"This package provides a @code{pathlib}-compatible @code{Zipfile} object
|
|
wrapper. It provides a backport of the @code{Path} object.")
|
|
(license license:expat)))
|
|
|
|
(define-public python-zopfli
|
|
(package
|
|
(name "python-zopfli")
|
|
(version "0.1.9")
|
|
(source
|
|
(origin
|
|
(method url-fetch)
|
|
(uri (pypi-uri "zopfli" version ".zip"))
|
|
(sha256
|
|
(base32 "0yqdwvlpbvhhri0qmzag076ddi0sv43qjlk17l0siylfib03rpkq"))))
|
|
(build-system python-build-system)
|
|
(arguments
|
|
(list
|
|
#:phases #~(modify-phases %standard-phases
|
|
(add-after 'unpack 'use-system-zopfli
|
|
(lambda _
|
|
(setenv "USE_SYSTEM_ZOPFLI" "1")))
|
|
(add-before 'build 'set-version
|
|
(lambda _
|
|
(setenv "SETUPTOOLS_SCM_PRETEND_VERSION" #$version)))
|
|
(replace 'check
|
|
(lambda* (#:key tests? #:allow-other-keys)
|
|
(when tests?
|
|
(invoke "python" "tests/tests.py" "-v")))))))
|
|
(native-inputs (list unzip python-setuptools-scm))
|
|
(inputs (list zopfli))
|
|
(home-page "https://github.com/fonttools/py-zopfli")
|
|
(synopsis "Python bindings for Zopfli")
|
|
(description "@code{pyzopfli} is a straight forward wrapper around the
|
|
@code{ZlibCompress} method of the the @code{zopfli} library.")
|
|
(license license:asl2.0)))
|
|
|
|
(define-public python-zstandard
|
|
(package
|
|
(name "python-zstandard")
|
|
(version "0.15.2")
|
|
(source
|
|
(origin
|
|
(method url-fetch)
|
|
(uri (pypi-uri "zstandard" version))
|
|
(sha256
|
|
(base32 "0by9z7nxnkzhmza075q6q91rs8lnpf91129k8ppv7kymbwshipjj"))))
|
|
(build-system python-build-system)
|
|
(native-inputs
|
|
(list python-hypothesis))
|
|
(home-page "https://github.com/indygreg/python-zstandard")
|
|
(synopsis "Zstandard bindings for Python")
|
|
(description "This project provides Python bindings for interfacing with
|
|
the Zstandard compression library. A C extension and CFFI interface are
|
|
provided.")
|
|
(license license:bsd-3)))
|
|
|
|
(define-public python-pyzstd
|
|
(package
|
|
(name "python-pyzstd")
|
|
(version "0.14.3")
|
|
(source
|
|
(origin
|
|
(method url-fetch)
|
|
(uri (pypi-uri "pyzstd" version))
|
|
(sha256
|
|
(base32
|
|
"1d3mngs45w2p490vrq5ymd2wz4lp15phmks1ilcx4k7amgibml3d"))))
|
|
(build-system python-build-system)
|
|
(home-page "https://github.com/animalize/pyzstd")
|
|
(synopsis "Zstandard bindings for Python")
|
|
(description "This package provides Python bindings to the Zstandard (zstd)
|
|
compression library. The API is similar to Python's bz2/lzma/zlib module.")
|
|
(license license:bsd-3)))
|