ea0a51071e
This change was automated via the following command: $ git ls-files | xargs sed -i 's/,qtbase)/,qtbase-5)/g' $ git ls-files | xargs sed -i 's/inherit qtbase)/inherit qtbase-5)/g' $ git ls-files | xargs sed -i 's/package-version qtbase)/package-version qtbase-5)/g' $ git checkout etc # to clear some spurious changes This is done so the qtbase package can be upgraded to version 6 in the following commit.
209 lines
8.2 KiB
Scheme
209 lines
8.2 KiB
Scheme
;;; GNU Guix --- Functional package management for GNU
|
|
;;; Copyright © 2021 Vinicius Monego <monego@posteo.net>
|
|
;;;
|
|
;;; This file is part of GNU Guix.
|
|
;;;
|
|
;;; GNU Guix is free software; you can redistribute it and/or modify it
|
|
;;; under the terms of the GNU General Public License as published by
|
|
;;; the Free Software Foundation; either version 3 of the License, or (at
|
|
;;; your option) any later version.
|
|
;;;
|
|
;;; GNU Guix is distributed in the hope that it will be useful, but
|
|
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
|
|
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
|
;;; GNU General Public License for more details.
|
|
;;;
|
|
;;; You should have received a copy of the GNU General Public License
|
|
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
|
|
|
|
(define-module (gnu packages orange)
|
|
#:use-module ((guix licenses) #:prefix license:)
|
|
#:use-module (guix packages)
|
|
#:use-module (guix download)
|
|
#:use-module (guix build-system python)
|
|
#:use-module (gnu packages)
|
|
#:use-module (gnu packages freedesktop)
|
|
#:use-module (gnu packages graph)
|
|
#:use-module (gnu packages machine-learning)
|
|
#:use-module (gnu packages python-crypto)
|
|
#:use-module (gnu packages python-science)
|
|
#:use-module (gnu packages python-web)
|
|
#:use-module (gnu packages python-xyz)
|
|
#:use-module (gnu packages qt))
|
|
|
|
(define-public python-orange-canvas-core
|
|
(package
|
|
(name "python-orange-canvas-core")
|
|
(version "0.1.19")
|
|
(source
|
|
(origin
|
|
(method url-fetch)
|
|
(uri (pypi-uri "orange-canvas-core" version))
|
|
(sha256
|
|
(base32 "03wav2msfm32y8zwq69v1v6qyh1ld76xla2z60avf49yhbwjgwal"))))
|
|
(build-system python-build-system)
|
|
(arguments
|
|
`(#:phases
|
|
(modify-phases %standard-phases
|
|
(add-before 'check 'check-setup
|
|
(lambda _
|
|
;; This test fails with: RuntimeError: Event loop is closed.
|
|
(substitute* "orangecanvas/application/tests/test_mainwindow.py"
|
|
(("test_help_requests") "_test_help_requests"))
|
|
(setenv "HOME" "/tmp")
|
|
(setenv "QT_QPA_PLATFORM" "offscreen")
|
|
#t)))))
|
|
(propagated-inputs
|
|
`(("python-anyqt" ,python-anyqt)
|
|
("python-cachecontrol" ,python-cachecontrol)
|
|
("python-commonmark" ,python-commonmark)
|
|
("python-dictdiffer" ,python-dictdiffer)
|
|
("python-docutils" ,python-docutils)
|
|
("python-pyqt" ,python-pyqt)
|
|
("python-qasync" ,python-qasync)
|
|
("python-requests" ,python-requests)))
|
|
(home-page "https://github.com/biolab/orange-canvas-core")
|
|
(synopsis "Core component of Orange Canvas")
|
|
(description
|
|
"Orange Canvas Core is a framework for building graphical user interfaces
|
|
for editing workflows. It is a component used to build the Orange Canvas
|
|
data-mining application.")
|
|
(license license:gpl3)))
|
|
|
|
(define-public python-orange-widget-base
|
|
(package
|
|
(name "python-orange-widget-base")
|
|
(version "4.12.0")
|
|
(source
|
|
(origin
|
|
(method url-fetch)
|
|
(uri (pypi-uri "orange-widget-base" version))
|
|
(sha256
|
|
(base32 "13sy3s8rdqs3i3ghixljpqvnfz81qmbb0kqlasw39zvf39qc22kz"))))
|
|
(build-system python-build-system)
|
|
(arguments
|
|
`(;; unittest fails to load one test, all other tests are passing:
|
|
;; AttributeError: module 'orangewidget' has no attribute 'version'.
|
|
#:tests? #f
|
|
#:phases
|
|
(modify-phases %standard-phases
|
|
(add-before 'check 'check-setup
|
|
(lambda _
|
|
(setenv "HOME" "/tmp")
|
|
(setenv "QT_QPA_PLATFORM" "offscreen")
|
|
#t)))))
|
|
(propagated-inputs
|
|
`(("python-anyqt" ,python-anyqt)
|
|
("python-matplotlib" ,python-matplotlib)
|
|
("python-orange-canvas-core"
|
|
,python-orange-canvas-core)
|
|
("python-pyqtgraph" ,python-pyqtgraph)))
|
|
(home-page "https://github.com/biolab/orange-widget-base")
|
|
(synopsis "Base Widget for Orange Canvas")
|
|
(description
|
|
"Orange Widget Base provides a base widget component for a interactive
|
|
GUI based workflow. It is primarily used in the Orange framework.")
|
|
(license license:gpl3+)))
|
|
|
|
(define-public orange
|
|
(package
|
|
(name "orange")
|
|
(version "3.28.0")
|
|
(source
|
|
(origin
|
|
(method url-fetch)
|
|
(uri (pypi-uri "Orange3" version))
|
|
(sha256
|
|
(base32 "1ac4xjjkx06z10hl7k0zh1z3qhkl5vng15l9jkpkmck9spinbzil"))))
|
|
(build-system python-build-system)
|
|
(arguments
|
|
`(#:phases
|
|
(modify-phases %standard-phases
|
|
(add-after 'unpack 'preparations
|
|
(lambda _
|
|
;; Delete test that opens an outgoing connection.
|
|
(delete-file "Orange/tests/test_url_reader.py")
|
|
;; This is a binary data file and it breaks runpath validation.
|
|
(delete-file "Orange/tests/datasets/binary-blob.tab")
|
|
;; Skip the test which uses that binary file.
|
|
(substitute* "Orange/tests/test_txt_reader.py"
|
|
(("test_read_nonutf8_encoding") "_test_read_nonutf8_encoding"))
|
|
;; We use a correct version of PyQtWebEngine, but the build scripts
|
|
;; consider it incorrect anyways. Remove the constraint entirely to
|
|
;; work around this bug.
|
|
(substitute* "requirements-gui.txt" (("PyQtWebEngine>=5.12") ""))
|
|
#t))
|
|
(add-before 'check 'set-HOME
|
|
;; Tests need a writable home.
|
|
(lambda _ (setenv "HOME" "/tmp") #t))
|
|
(add-after 'install 'wrap-executable
|
|
;; Ensure that icons are found at runtime.
|
|
(lambda* (#:key inputs outputs #:allow-other-keys)
|
|
(let ((out (assoc-ref outputs "out")))
|
|
(wrap-program (string-append out "/bin/orange-canvas")
|
|
`("QT_PLUGIN_PATH" prefix
|
|
,(list (string-append (assoc-ref inputs "qtsvg")
|
|
"/lib/qt5/plugins/")))))
|
|
#t)))))
|
|
(native-inputs
|
|
`(("python-cython" ,python-cython)))
|
|
(inputs
|
|
`(("python-anyqt" ,python-anyqt)
|
|
("python-baycomp" ,python-baycomp)
|
|
("python-bottleneck" ,python-bottleneck)
|
|
("python-chardet" ,python-chardet)
|
|
("python-httpx" ,python-httpx)
|
|
("python-joblib" ,python-joblib)
|
|
("python-keyring" ,python-keyring)
|
|
("python-keyrings.alt" ,python-keyrings.alt)
|
|
("python-louvain" ,python-louvain)
|
|
("python-matplotlib" ,python-matplotlib)
|
|
("python-networkx" ,python-networkx)
|
|
("python-numpy" ,python-numpy)
|
|
("python-openpyxl" ,python-openpyxl)
|
|
("python-opentsne" ,python-opentsne)
|
|
("python-orange-canvas-core"
|
|
,python-orange-canvas-core)
|
|
("python-orange-widget-base"
|
|
,python-orange-widget-base)
|
|
("python-pandas" ,python-pandas)
|
|
("python-pyqt" ,python-pyqt)
|
|
("python-pyqtgraph" ,python-pyqtgraph)
|
|
("python-pyqtwebengine" ,python-pyqtwebengine)
|
|
("python-pyyaml" ,python-pyyaml)
|
|
("python-requests" ,python-requests)
|
|
("python-scikit-learn" ,python-scikit-learn)
|
|
("python-scipy" ,python-scipy)
|
|
("python-serverfiles" ,python-serverfiles)
|
|
("python-xlrd" ,python-xlrd)
|
|
("python-xlsxwriter" ,python-xlsxwriter)
|
|
("qtbase" ,qtbase-5)
|
|
("qtsvg" ,qtsvg)
|
|
("xdg-utils" ,xdg-utils)))
|
|
(home-page "https://orangedatamining.com/")
|
|
(synopsis "Component-based data mining framework")
|
|
(description
|
|
"Orange is a component-based, graphical framework for machine learning,
|
|
data analysis, data mining and data visualization.")
|
|
(license license:gpl3+)))
|
|
|
|
(define-public python-serverfiles
|
|
(package
|
|
(name "python-serverfiles")
|
|
(version "0.3.1")
|
|
(source
|
|
(origin
|
|
(method url-fetch)
|
|
(uri (pypi-uri "serverfiles" version))
|
|
(sha256
|
|
(base32 "1qgbzgnaxj4wsp2rdas53qxsh0j7xpibq25w6lviwyaqwwrgq42y"))))
|
|
(build-system python-build-system)
|
|
(propagated-inputs
|
|
`(("python-requests" ,python-requests)))
|
|
(home-page "https://github.com/biolab/serverfiles")
|
|
(synopsis "Utility to access files on a HTTP server and store them locally")
|
|
(description
|
|
"This package provides an utility that accesses files on a HTTP server
|
|
and stores them locally for reuse. It is primarily used by the Orange
|
|
framework.")
|
|
(license license:gpl3+)))
|