05e3638bb9
This is in prevision of updating python-pypa-build, which now requires python-packaging and adding python-tomli, which requires python-six. * gnu/packages/python-xyz.scm (python-six) (python-six-bootstrap, python2-six-bootstrap) (python-pyparsing, python2-pyparsing, python-pyparsing-2.4.7) (python-packaging-bootstrap, python2-packaging-bootstrap): Move packages to... * gnu/packages/python-build.scm: ... here. Update python-parsing to latest. * gnu/packages/python-xyz.scm (python-six, python-packaging): Adjust to inherit from their bootstrap versions.
473 lines
18 KiB
Scheme
473 lines
18 KiB
Scheme
;;; GNU Guix --- Functional package management for GNU
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;;; Copyright © 2013, 2014, 2015 Andreas Enge <andreas@enge.fr>
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;;; Copyright © 2015, 2016, 2018 Ricardo Wurmus <rekado@elephly.net>
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;;; Copyright © 2018–2021 Tobias Geerinckx-Rice <me@tobias.gr>
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;;; Copyright © 2019 Julien Lepiller <julien@lepiller.eu>
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;;; Copyright © 2020 Alexandros Theodotou <alex@zrythm.org>
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;;; Copyright © 2020 Pjotr Prins <pjotr.guix@thebird.nl>
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;;; Copyright © 2020 Efraim Flashner <efraim@flashner.co.il>
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;;; Copyright © 2020 pukkamustard <pukkamustard@posteo.net>
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;;;
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;;; This file is part of GNU Guix.
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;;;
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;;; GNU Guix is free software; you can redistribute it and/or modify it
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;;; under the terms of the GNU General Public License as published by
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;;; the Free Software Foundation; either version 3 of the License, or (at
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;;; your option) any later version.
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;;;
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;;; GNU Guix is distributed in the hope that it will be useful, but
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;;; WITHOUT ANY WARRANTY; without even the implied warranty of
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;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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;;; GNU General Public License for more details.
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;;;
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;;; You should have received a copy of the GNU General Public License
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;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
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(define-module (gnu packages rdf)
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#:use-module ((guix licenses) #:prefix license:)
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#:use-module (guix packages)
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#:use-module (guix git-download)
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#:use-module (guix download)
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#:use-module (guix build-system cmake)
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#:use-module (guix build-system gnu)
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#:use-module (guix build-system python)
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#:use-module (guix build-system waf)
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#:use-module (gnu packages)
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#:use-module (gnu packages autotools)
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#:use-module (gnu packages boost)
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#:use-module (gnu packages check)
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#:use-module (gnu packages compression)
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#:use-module (gnu packages curl)
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#:use-module (gnu packages cyrus-sasl)
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#:use-module (gnu packages documentation)
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#:use-module (gnu packages dbm)
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#:use-module (gnu packages gnupg)
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#:use-module (gnu packages linux)
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#:use-module (gnu packages multiprecision)
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#:use-module (gnu packages pcre)
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#:use-module (gnu packages perl)
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#:use-module (gnu packages pkg-config)
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#:use-module (gnu packages python)
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#:use-module (gnu packages python-build)
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#:use-module (gnu packages python-web)
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#:use-module (gnu packages python-xyz)
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#:use-module (gnu packages qt)
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#:use-module (gnu packages time)
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#:use-module (gnu packages tls)
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#:use-module (gnu packages xml))
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(define-public raptor2
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(package
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(name "raptor2")
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(version "2.0.15")
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(source (origin
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(method url-fetch)
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(uri (string-append "https://download.librdf.org/source/" name
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"-" version ".tar.gz"))
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(patches
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(search-patches "raptor2-heap-overflow.patch"))
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(sha256
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(base32
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"1vc02im4mpc28zxzgli68k6j0dakh0k3s389bm436yvqajxg19xd"))))
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(build-system gnu-build-system)
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(inputs
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`(("curl" ,curl)
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("libxml2" ,libxml2)
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("libxslt" ,libxslt)
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("zlib" ,zlib)))
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(arguments
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`(#:parallel-tests? #f))
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(home-page "https://librdf.org/raptor/")
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(synopsis "RDF syntax library")
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(description "Raptor is a C library providing a set of parsers and
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serialisers that generate Resource Description Framework (RDF) triples
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by parsing syntaxes or serialise the triples into a syntax. The supported
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parsing syntaxes are RDF/XML, N-Quads, N-Triples 1.0 and 1.1, TRiG,
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Turtle 2008 and 2013, RDFa 1.0 and 1.1, RSS tag soup including all versions
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of RSS, Atom 1.0 and 0.3, GRDDL and microformats for HTML, XHTML and
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XML. The serialising syntaxes are RDF/XML (regular, abbreviated, XMP),
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Turtle 2013, N-Quads, N-Triples 1.1, Atom 1.0, RSS 1.0, GraphViz DOT,
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HTML and JSON.")
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(license license:lgpl2.1+))) ; or any choice of gpl2+ or asl2.0
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(define-public clucene
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(package
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(name "clucene")
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(version "2.3.3.4")
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(source (origin
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(method url-fetch)
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(uri (string-append "mirror://sourceforge/clucene/"
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"clucene-core-unstable/2.3/clucene-core-"
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version ".tar.gz"))
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(sha256
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(base32
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"1arffdwivig88kkx685pldr784njm0249k0rb1f1plwavlrw9zfx"))
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(patches (search-patches "clucene-pkgconfig.patch"
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"clucene-contribs-lib.patch"))))
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(build-system cmake-build-system)
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(inputs
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`(("boost" ,boost) ; could also use bundled copy
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("zlib" ,zlib)))
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(arguments
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`(#:test-target "cl_test"
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#:configure-flags '("-DBUILD_CONTRIBS_LIB=ON")
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#:tests? #f)) ; Tests do not compile, as TestIndexSearcher.cpp uses
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; undeclared usleep. After fixing this, one needs to run
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; "make test" in addition to "make cl_test", then
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; SimpleTest fails.
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; Notice that the library appears to be unmaintained
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; with no reaction to bug reports.
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(home-page "http://clucene.sourceforge.net/")
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(synopsis "C text indexing and searching library")
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(description "CLucene is a high-performance, scalable, cross platform,
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full-featured indexing and searching API. It is a port of the very popular
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Java Lucene text search engine API to C++.")
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(license license:lgpl2.1)))
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(define-public lucene++
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(package
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(name "lucene++")
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(version "3.0.7")
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/luceneplusplus/LucenePlusPlus")
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(commit (string-append "rel_" version))))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"06b37fly6l27zc6kbm93f6khfsv61w792j8xihfagpcm9cfz2zi1"))))
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(build-system cmake-build-system)
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(arguments
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`(#:configure-flags
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;; CXX_FLAGS suggested in a closed issue on github:
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;; https://github.com/luceneplusplus/LucenePlusPlus/issues/100
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(list "-Wno-dev" "-DCMAKE_CXX_FLAGS=-DBOOST_VARIANT_USE_RELAXED_GET_BY_DEFAULT"
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;; Install in lib64 break rpath
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"-DCMAKE_INSTALL_LIBDIR:PATH=lib")))
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(native-inputs
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`(("pkg-config" ,pkg-config)))
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(inputs
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`(("boost" ,boost)))
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(home-page "https://github.com/luceneplusplus/LucenePlusPlus")
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(synopsis "Text search engine")
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(description "Lucene++ is an up to date C++ port of the popular Java
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Lucene library, a high-performance, full-featured text search engine.")
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(license (list license:asl2.0 license:lgpl3+)))); either asl or lgpl.
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(define-public lrdf
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(package
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(name "lrdf")
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(version "0.6.1")
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/swh/LRDF")
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(commit (string-append "v" version))))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"00wzkfb8y0aqd519ypz067cq099dpc89w69zw8ln39vl6f9x2pd4"))))
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(build-system gnu-build-system)
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(arguments
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'(#:phases
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(modify-phases %standard-phases
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(add-after 'unpack 'remove-out-of-tree-references
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(lambda _
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;; remove_test depends on an out-of-tree RDF file
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(substitute* "examples/Makefile.am"
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(("instances_test remove_test") "instances_test")
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(("\\$\\(TESTS\\) remove_test") "$(TESTS)"))
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#t))
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;; The default bootstrap phase executes autogen.sh, which fails.
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(replace 'bootstrap
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(lambda _ (invoke "autoreconf" "-vif") #t)))))
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(inputs
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`(("raptor" ,raptor2)
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("cyrus-sasl" ,cyrus-sasl)
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("zlib" ,zlib)))
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(native-inputs
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`(("autoconf" ,autoconf)
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("automake" ,automake)
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("libtool" ,libtool)
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("pkg-config" ,pkg-config)))
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(home-page "https://github.com/swh/LRDF")
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(synopsis "Lightweight RDF library for accessing LADSPA plugin metadata")
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(description
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"LRDF is a library to make it easy to manipulate RDF files describing
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LADSPA plugins. It can also be used for general RDF manipulation. It can
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read RDF/XLM and N3 files and export N3 files, and it also has a light
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taxonomic inference capability.")
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(license license:gpl2)))
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(define-public rasqal
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(package
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(name "rasqal")
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(version "0.9.33")
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(source (origin
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(method url-fetch)
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(uri (string-append "http://download.librdf.org/source/" name
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"-" version ".tar.gz"))
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(sha256
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(base32
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"0z6rrwn4jsagvarg8d5zf0j352kjgi33py39jqd29gbhcnncj939"))))
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(build-system gnu-build-system)
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(native-inputs
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`(("perl" ,perl)
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("perl-xml-dom" ,perl-xml-dom) ; for the tests
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("pkg-config" ,pkg-config)))
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(inputs
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`(("libgcrypt" ,libgcrypt)
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("libxml2" ,libxml2)
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("mpfr" ,mpfr)
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("pcre" ,pcre)
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("util-linux" ,util-linux "lib")))
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(propagated-inputs
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`(("raptor2" ,raptor2))) ; stipulated by rasqal.pc
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(arguments
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`(#:parallel-tests? #f
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; test failure reported upstream, see
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; http://bugs.librdf.org/mantis/view.php?id=571
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#:tests? #f))
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(home-page "http://librdf.org/rasqal/")
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(synopsis "RDF query library")
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(description "Rasqal is a C library that handles Resource Description
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Framework (RDF) query language syntaxes, query construction and execution
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of queries returning results as bindings, boolean, RDF graphs/triples or
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syntaxes. The supported query languages are SPARQL Query 1.0,
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SPARQL Query 1.1, SPARQL Update 1.1 (no executing) and the Experimental
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SPARQL extensions (LAQRS). Rasqal can write binding query results in the
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SPARQL XML, SPARQL JSON, CSV, TSV, HTML, ASCII tables, RDF/XML and
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Turtle/N3 and read them in SPARQL XML, RDF/XML and Turtle/N3.")
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(license license:lgpl2.1+))) ; or any choice of gpl2+ or asl2.0
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(define-public redland
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(package
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(name "redland")
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(version "1.0.17")
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(source (origin
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(method url-fetch)
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(uri (string-append "http://download.librdf.org/source/" name
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"-" version ".tar.gz"))
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(sha256
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(base32
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||
"109n0kp39p966dpiasad2bb7q66rwbcb9avjvimw28chnpvlf66y"))))
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(build-system gnu-build-system)
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(native-inputs
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`(("perl" ,perl) ; needed for installation
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("pkg-config" ,pkg-config)))
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(propagated-inputs
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`(("rasqal" ,rasqal))) ; in Requires.private field of .pc
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(inputs
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`(("bdb" ,bdb)))
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(home-page "http://librdf.org/")
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(synopsis "RDF library")
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(description "The Redland RDF Library (librdf) provides the RDF API
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and triple stores.")
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(license license:lgpl2.1+))) ; or any choice of gpl2+ or asl2.0
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(define-public serd
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(package
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(name "serd")
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(version "0.30.8")
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(source (origin
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(method url-fetch)
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(uri (string-append "https://download.drobilla.net/serd-"
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version ".tar.bz2"))
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(sha256
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(base32
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"11zs53yx40mv62vxsl15mvdh7s17y5v6lgcgahdvzxgnan7w8bk7"))))
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(build-system waf-build-system)
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(arguments
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`(#:tests? #f ; no check target
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#:phases
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(modify-phases %standard-phases
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(add-before
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'configure 'set-ldflags
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(lambda* (#:key outputs #:allow-other-keys)
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(setenv "LDFLAGS"
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(string-append "-Wl,-rpath="
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(assoc-ref outputs "out") "/lib"))
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#t)))))
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(home-page "https://drobilla.net/software/serd/")
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(synopsis "Library for RDF syntax supporting Turtle and NTriples")
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(description
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"Serd is a lightweight C library for RDF syntax which supports reading
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and writing Turtle and NTriples. Serd is not intended to be a swiss-army
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knife of RDF syntax, but rather is suited to resource limited or performance
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critical applications (e.g. converting many gigabytes of NTriples to Turtle),
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or situations where a simple reader/writer with minimal dependencies is
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ideal (e.g. in LV2 implementations or embedded applications).")
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(license license:isc)))
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(define-public sord
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(package
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(name "sord")
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(version "0.16.8")
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(source (origin
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(method url-fetch)
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(uri (string-append "https://download.drobilla.net/sord-"
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version ".tar.bz2"))
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(sha256
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(base32
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"052y7zllrg0bzyky2rmrrwnnf16p6bk7q40rq9mgm0mzm8p9sa3w"))))
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(build-system waf-build-system)
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(arguments
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`(#:tests? #f ; no check target
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#:phases
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(modify-phases %standard-phases
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(add-before
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'configure 'set-ldflags
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(lambda* (#:key outputs #:allow-other-keys)
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(setenv "LDFLAGS"
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(string-append "-Wl,-rpath="
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(assoc-ref outputs "out") "/lib"))
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#t)))))
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(inputs
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`(("pcre" ,pcre)))
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(native-inputs
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`(("pkg-config" ,pkg-config)))
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(propagated-inputs
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`(("serd" ,serd))) ; required by sord-0.pc
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(home-page "https://drobilla.net/software/sord/")
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||
(synopsis "C library for storing RDF data in memory")
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(description
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"Sord is a lightweight C library for storing RDF data in memory.")
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(license license:isc)))
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(define-public python-rdflib
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(package
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(name "python-rdflib")
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(version "4.2.2")
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(source
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(origin
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(method url-fetch)
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(uri (pypi-uri "rdflib" version))
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||
(sha256
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||
(base32
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||
"0398c714znnhaa2x7v51b269hk20iz073knq2mvmqp2ma92z27fs"))))
|
||
(build-system python-build-system)
|
||
(arguments
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||
'(;; FIXME: Three test failures. Should be fixed next release.
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#:tests? #f))
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;; #:phases
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||
;; (modify-phases %standard-phases
|
||
;; (replace 'check
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||
;; (lambda _
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||
;; ;; Run tests from the build directory so python3 only
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||
;; ;; sees the installed 2to3 version.
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||
;; (invoke "nosetests" "--where=./build/src"))))))
|
||
(native-inputs
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||
`(("python-nose" ,python-nose)))
|
||
(propagated-inputs
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||
`(("python-html5lib" ,python-html5lib)
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||
("python-isodate" ,python-isodate)
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||
("python-pyparsing" ,python-pyparsing)))
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||
(home-page "https://github.com/RDFLib/rdflib")
|
||
(synopsis "Python RDF library")
|
||
(description
|
||
"RDFLib is a Python library for working with RDF, a simple yet
|
||
powerful language for representing information.")
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||
(license (license:non-copyleft "file://LICENSE"
|
||
"See LICENSE in the distribution."))))
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||
|
||
(define-public python2-rdflib
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||
(package-with-python2 python-rdflib))
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||
|
||
(define-public python-rdflib-jsonld
|
||
(package
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||
(name "python-rdflib-jsonld")
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||
(version "0.5.0")
|
||
(source
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||
(origin
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||
(method url-fetch)
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||
(uri (pypi-uri "rdflib-jsonld" version))
|
||
(sha256
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||
(base32
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||
"1v85f4hdlrrk0l1najmqmm79ijrvcj259kwsrrxiq1q5chr5azag"))))
|
||
(build-system python-build-system)
|
||
(native-inputs
|
||
`(("python-nose" ,python-nose)))
|
||
(propagated-inputs
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||
`(("python-rdflib" ,python-rdflib)))
|
||
(home-page "https://github.com/RDFLib/rdflib-jsonld")
|
||
(synopsis "rdflib extension adding JSON-LD parser and serializer")
|
||
(description "This package provides an rdflib extension adding JSON-LD
|
||
parser and serializer.")
|
||
(license license:bsd-3)))
|
||
|
||
(define-public python-cfgraph
|
||
(package
|
||
(name "python-cfgraph")
|
||
(version "0.2.1")
|
||
(source
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||
(origin
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||
(method url-fetch)
|
||
(uri (pypi-uri "CFGraph" version))
|
||
(sha256
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||
(base32
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||
"0x7yz0lvqb6mkhl5fbml27sppmscgpf8v2ism9jzzf0h982ffzxm"))))
|
||
(build-system python-build-system)
|
||
(propagated-inputs
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||
`(("python-rdflib" ,python-rdflib)))
|
||
(home-page "https://github.com/hsolbrig/CFGraph")
|
||
(synopsis "RDF Collections flattener for rdflib")
|
||
(description
|
||
"This package contains RDF Collections flattener for @code{rdflib}.")
|
||
(license license:asl2.0)))
|
||
|
||
(define-public hdt-cpp
|
||
(package
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||
(name "hdt-cpp")
|
||
(version "1.3.3")
|
||
(source (origin
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||
(method git-fetch)
|
||
(uri (git-reference
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||
(url "https://github.com/rdfhdt/hdt-cpp")
|
||
(commit (string-append "v" version))))
|
||
(file-name (git-file-name name version))
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||
(sha256
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||
(base32
|
||
"1vsq80jnix6cy78ayag7v8ajyw7h8dqyad1q6xkf2hzz3skvr34z"))))
|
||
(build-system gnu-build-system)
|
||
(inputs
|
||
`(("serd" ,serd)
|
||
("zlib" ,zlib)))
|
||
(native-inputs
|
||
`(("autoconf" ,autoconf)
|
||
("automake" ,automake)
|
||
("libtool" ,libtool)
|
||
("pkg-config" ,pkg-config)))
|
||
(home-page "https://github.com/rdfhdt/hdt-cpp")
|
||
(synopsis "C++ implementation of the HDT compression format")
|
||
(description "Header Dictionary Triples (HDT) is a compression format for
|
||
RDF data that can also be queried for Triple Patterns. This package provides a
|
||
C++ library as well as various command-line tools to to work with HDT.")
|
||
(license license:lgpl2.1+)))
|
||
|
||
(define-public python-sparqlwrapper
|
||
(package
|
||
(name "python-sparqlwrapper")
|
||
(version "1.8.5")
|
||
(source (origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/RDFLib/sparqlwrapper.git")
|
||
(commit version)))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32
|
||
"1ia5h06zf6kpw6gdi7f80pzx10m79brj08zrbffb5wn9hzz8x528"))))
|
||
(build-system python-build-system)
|
||
(arguments
|
||
'(#:tests? #f)) ; The test suite simply queries external HTTP endpoints.
|
||
(native-inputs
|
||
`(("python-nose" ,python-nose)))
|
||
(propagated-inputs
|
||
`(("python-rdflib" ,python-rdflib)))
|
||
(home-page "https://rdflib.dev/sparqlwrapper/")
|
||
(synopsis "SPARQL Endpoint interface to Python")
|
||
(description "Python wrapper around a SPARQL service. It helps in creating
|
||
the query URI and, possibly, convert the result into a more manageable
|
||
format.")
|
||
(license license:w3c)))
|