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gnu: Add r-classdiscovery.

* gnu/packages/bioconductor.scm (r-classdiscovery): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Navid Afkhami 2023-08-28 12:34:18 +00:00 committed by Ricardo Wurmus
parent 99ed03843c
commit 3350e871a8
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1 changed files with 27 additions and 0 deletions

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@ -13924,6 +13924,33 @@ interpreting functional enrichment results obtained from ORA or GSEA analyses.
All the visualization methods are developed based on ggplot2 graphics.")
(license license:artistic2.0)))
;; This is a CRAN package, but it depends on Bioconductor packages, so we
;; added it here.
(define-public r-classdiscovery
(package
(name "r-classdiscovery")
(version "3.4.0")
(source (origin
(method url-fetch)
(uri (cran-uri "ClassDiscovery" version))
(sha256
(base32
"06l7jvpcdynij05hb0ka33zpg7xdyqyzfzx24s0bnlspp83yc62s"))))
(properties `((upstream-name . "ClassDiscovery")))
(build-system r-build-system)
(propagated-inputs
(list r-biobase r-cluster r-mclust r-oompabase r-oompadata))
(native-inputs
(list r-xtable)) ;for vignettes
(home-page "https://oompa.r-forge.r-project.org/")
(synopsis
"Classes and methods for \"Class Discovery\" with Microarrays or Proteomics")
(description
"This package defines classes for \"class discovery\" in the OOMPA project.
Class discovery primarily consists of unsupervised clustering methods with
attempts to assess their statistical significance.")
(license license:asl2.0)))
(define-public r-clusterprofiler
(package
(name "r-clusterprofiler")